IVF0002269.2 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0002269.2
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Beta-galactosidase
Location	chr10: 2763248 .. 2765976 (-)
Sequence length	1798
RNA-Seq Expression	IVF0002269.2
Synteny	IVF0002269.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATCATGAGTTGATCTAATGATAAAAAGGAGACACGGTCTCAATAACTAACTAAAAGATTATGAGTTCAATCTGTTAGAATTAGTACTTTTGGAAAGAATAAAATATACTTTTGGAAAAAATAAAATATAAGATTTTATTTCCTAAATATTTCCTAAATCTTTTCCTTTCTTATTCCTATTGTACTATATTTATACTCCCTTTGTACCTATTGTTTTTGTTCATAAGAAAAATAATAAAAACTAAAGTATCGTGGTTTTTCTCCCGGTTCTCGGGTTTCCACGTAAGTCTCGGGTTGTTGTTAATTGCTTTCAATATGGTATCAGAGCAAAGCAATAACGAAACCCTAGAAAATAACCTAGGAGAAACCCAGATCGAAACTGAACCCGTCACCGCCGCCGCCGGAATCGCCGCCGCCATGGAGAAACTGCTCCAGAACCTACAGAAACCGCCGATCTACCCAACGGGAGTGGTTCCGCAGCCGCACGCGCCGCCGCCGTTTCACGTCACCGCCCATCCCGTTCCCTTCTACGCGCCGTCGGATGTCCAGCCGTCAAACCCTTCCGACCATCCGCATCCTCATGCGCCGTCTACGAGCTCCGGACAGCATCCCTCAACCGTAAATTTGTCAAATCAGTACAGTAAGCAGCAGCTGTACGTTGACCCCTTACAGCAACCGCTGTTTTCTGGTAACGGAATTGATCAACCCCAAAACAGATCGGACATTGAAGCGGGCGAATCTTCAACGCATTCCAAACCAACCGAGTTGCCGATGTATTCCAAGAACTCGGTAACTTCGTTCCCTAATTCACAGTCAAATTATATAACTGGCTCTTTGGGTTCGTCTACAGGGAATTTTTCAGGCGAAAAATTAAATGGTCAAAATTAATTTTCTTGGTCCCAATCAATAAAGATGTTCCTCGAAGGTCGATACCAGTTCGGATTCTTAACTGGAGAGACTGTACGTCCTCCACCAGGAGACGCCTTGGAACGACTCTGGAAAGGAGAGGACTCACTTATTCGGTCCATGTTGATTAATAGTATGGAACCACAGATCGGCAAGCCTTTACTATATGCAGCCACAGCAAAAGATTTGTGGGATACAACTCAGACCCTTTACTCGAAACGACAGAATGCCTCTCGGTTATATACACTGCGAAAACAGGTCCATAATTGCAAACAAGGGACCCTGGACGTAACTACCTATTTTAACAAGCTCTCTCTCCTCTGGCAAGAGATGGATTTGTGCAGAGAGACAGTTTGGGACACACCAAATGACAGTACACAATATGCTAAACTTGAAGAGGCTGACCGTGTTTATGACTTCCTTGGAGGACTTAATCCCAAATTTGATAATGTTTGTGGTCGTATACTCGGACAAAGACCTCTTCCCTCGCTAATGGAAGTTTGTTTTGAAGTCCGCCTGGAAGAGGATCGCACTAATGCCATGGGTGTATTGACTACCCCTACCATTGACTCCGCAGCCTTTAGCGCTCGGTCCTCAAATCATGACAGTGACAAGAATAATGGGAAGTCAATTCCTGTGTGTGAGCACTGCAAGAAACAATGGCACACCAAGGATCAGTGTTGGAAACTCCACGGTCGTCCCCCAGGAGGTAAGAAACGGTCCTCCAACGAGAAACAGAACTCAGGACGTGCCTACATTAGTGAGACTACACCTGCTAGCACTTCTCAATCAACTGATCCTACTGTGAGCCAGACCAAGACTCCGACTCTGGGTGCCATTGCTCAGTCAGGTATGCCTCAGTCCCTTGGGCTTATTAGCGTTGATGGGAAGAATCCCTGGATCTTAGACTCGGGGGCTACAGATCACTTGACAGGTTCTTCAGAACACTTTATCTCATATGCCCCGTGTGCCGGTAATGAAAAAATCCGAATAGCCGATGGCTCTCTAGCTCCGATCGCTGGCAAAGGACAAATAATTCCCTTTGACGGTTTTGCTCTCCAGAATGTTTTGCATGTCCCTAAACTGTCTTACAATTTGTTATCTATAAGCAAGATCACTCGTGAGTTGCATTGTAAAGCTATCTTCTTACCTGAATCGGTTTATTTTCAGGACATGAGCTCGGGGAGGACGATTGGCACTGCCCGGCATAGCAGGGGACTTTACATCCTTGATGATGATACCTCATGTAGTAGTTTGTCTAGGGTTAGTTTACTGTCATCCTACTTTAGTGACGTTTGGGGTCCTTCCAAGGTCACCACCTCCTCGGGAAAGCGGTGGTTTGTAACTTTCATTGATGACCATACCCGTCTCACCTGGGTCTACCTTATCTCAGATAAATCCGAGGTTCCATCCATTTTCCAAAACTTCTATCATACTATCAAAACACAATTTCATACAAAAATTGCAATTCTTCGAAGTGATAATGGTCGGGAATTCCAAAACCATAACCTTAGTGAATTTCTAGCCTCCAAGGGGATTGTTCACCAAACCTCATGTGCCTACACTCCTCAACAAAATGGAGTGGCCGAACGAAAAAACCGACACCTTGTGGAAGTAGCCGCTCACTTATGCTTTCCACTTCCCTTCCATCATACCTGTGGGGAGATGCTATTCTTACAGCTGCTCACTTAATCAATAGAATGCCTTCTCGTATCCTCCACCTTCAGACTCCCTTAGATTGTCTTAAGGAGTCTTACCCCTCTACTCGTCTTGTTTCTGAGGTTCCTCTTCGTGTGTTTGGGTGCACCGCCTATGTCCATAA

mRNA sequence

CTATCATGAGTTGATCTAATGATAAAAAGGAGACACGGTCTCAATAACTAACTAAAAGATTATGAGTTCAATCTGTTAGAATTAGTACTTTTGGAAAGAATAAAATATACTTTTGGAAAAAATAAAATATAAGATTTTATTTCCTAAATATTTCCTAAATCTTTTCCTTTCTTATTCCTATTGTACTATATTTATACTCCCTTTGTACCTATTGTTTTTGTTCATAAGAAAAATAATAAAAACTAAAGTATCGTGGTTTTTCTCCCGGTTCTCGGGTTTCCACGTAAGTCTCGGGTTGTTGTTAATTGCTTTCAATATGGTATCAGAGCAAAGCAATAACGAAACCCTAGAAAATAACCTAGGAGAAACCCAGATCGAAACTGAACCCGTCACCGCCGCCGCCGGAATCGCCGCCGCCATGGAGAAACTGCTCCAGAACCTACAGAAACCGCCGATCTACCCAACGGGAGTGGTTCCGCAGCCGCACGCGCCGCCGCCGTTTCACGTCACCGCCCATCCCGTTCCCTTCTACGCGCCGTCGGATGTCCAGCCGTCAAACCCTTCCGACCATCCGCATCCTCATGCGCCGTCTACGAGCTCCGGACAGCATCCCTCAACCGTAAATTTGTCAAATCAGTACAGTAAGCAGCAGCTGTACGTTGACCCCTTACAGCAACCGCTGTTTTCTGGTAACGGAATTGATCAACCCCAAAACAGATCGGACATTGAAGCGGGCGAATCTTCAACGCATTCCAAACCAACCGAGTTGCCGATGTATTCCAAGAACTCGGTAACTTCGTTCCCTAATTCACAGTCAAATTATATAACTGGCTCTTTGGGTTCGTCTACAGGGAATTTTTCAGGCGAAAAATTAAATGGTCAAAATTAATTTTCTTGGTCCCAATCAATAAAGATGTTCCTCGAAGGTCGATACCAGTTCGGATTCTTAACTGGAGAGACTGTACGTCCTCCACCAGGAGACGCCTTGGAACGACTCTGGAAAGGAGAGGACTCACTTATTCGGTCCATGTTGATTAATAGTATGGAACCACAGATCGGCAAGCCTTTACTATATGCAGCCACAGCAAAAGATTTGTGGGATACAACTCAGACCCTTTACTCGAAACGACAGAATGCCTCTCGGTTATATACACTGCGAAAACAGGTCCATAATTGCAAACAAGGGACCCTGGACGTAACTACCTATTTTAACAAGCTCTCTCTCCTCTGGCAAGAGATGGATTTGTGCAGAGAGACAGTTTGGGACACACCAAATGACAGTACACAATATGCTAAACTTGAAGAGGCTGACCGTGTTTATGACTTCCTTGGAGGACTTAATCCCAAATTTGATAATGTTTGTGGTCGTATACTCGGACAAAGACCTCTTCCCTCGCTAATGGAAGTTTGTTTTGAAGTCCGCCTGGAAGAGGATCGCACTAATGCCATGGGTGTATTGACTACCCCTACCATTGACTCCGCAGCCTTTAGCGCTCGGTCCTCAAATCATGACAGTGACAAGAATAATGGGAAGTCAATTCCTGTGTGTGAGCACTGCAAGAAACAATGGCACACCAAGGATCAGTGTTGGAAACTCCACGGTCGTCCCCCAGGAGGTAAGAAACGGTCCTCCAACGAGAAACAGAACTCAGGACGTGCCTACATTAGTGAGACTACACCTGCTAGCACTTCTCAATCAACTGATCCTACTGTGAGCCAGACCAAGACTCCGACTCTGGGTGCCATTGCTCAGTCAGGTTCCTCTTCGTGTGTTTGGGTGCACCGCCTATGTCCATAA

Coding sequence (CDS)

ATGTTCCTCGAAGGTCGATACCAGTTCGGATTCTTAACTGGAGAGACTGTACGTCCTCCACCAGGAGACGCCTTGGAACGACTCTGGAAAGGAGAGGACTCACTTATTCGGTCCATGTTGATTAATAGTATGGAACCACAGATCGGCAAGCCTTTACTATATGCAGCCACAGCAAAAGATTTGTGGGATACAACTCAGACCCTTTACTCGAAACGACAGAATGCCTCTCGGTTATATACACTGCGAAAACAGGTCCATAATTGCAAACAAGGGACCCTGGACGTAACTACCTATTTTAACAAGCTCTCTCTCCTCTGGCAAGAGATGGATTTGTGCAGAGAGACAGTTTGGGACACACCAAATGACAGTACACAATATGCTAAACTTGAAGAGGCTGACCGTGTTTATGACTTCCTTGGAGGACTTAATCCCAAATTTGATAATGTTTGTGGTCGTATACTCGGACAAAGACCTCTTCCCTCGCTAATGGAAGTTTGTTTTGAAGTCCGCCTGGAAGAGGATCGCACTAATGCCATGGGTGTATTGACTACCCCTACCATTGACTCCGCAGCCTTTAGCGCTCGGTCCTCAAATCATGACAGTGACAAGAATAATGGGAAGTCAATTCCTGTGTGTGAGCACTGCAAGAAACAATGGCACACCAAGGATCAGTGTTGGAAACTCCACGGTCGTCCCCCAGGAGGTAAGAAACGGTCCTCCAACGAGAAACAGAACTCAGGACGTGCCTACATTAGTGAGACTACACCTGCTAGCACTTCTCAATCAACTGATCCTACTGTGAGCCAGACCAAGACTCCGACTCTGGGTGCCATTGCTCAGTCAGGTTCCTCTTCGTGTGTTTGGGTGCACCGCCTATGTCCATAA

Protein sequence

MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKDLWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADRVYDFLGGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSSNEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSGSSSCVWVHRLCP

Homology

[Close]

BLAST of IVF0002269.2 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 8.9e-162
Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 60
           MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD
Sbjct: 186 MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 245

Query: 61  LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 120
           LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP
Sbjct: 246 LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 305

Query: 121 NDSTQYAKLEEADRVYDFLGGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 180
           NDSTQYAKLEEADRVYDFL GLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG
Sbjct: 306 NDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 365

Query: 181 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 240
           VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS
Sbjct: 366 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 425

Query: 241 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 283
           NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG
Sbjct: 426 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 467

[Close]

BLAST of IVF0002269.2 vs. ExPASy TrEMBL
Match: A0A5A7SQW1 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00190 PE=4 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 8.9e-162
Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 60
           MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD
Sbjct: 186 MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 245

Query: 61  LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 120
           LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP
Sbjct: 246 LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 305

Query: 121 NDSTQYAKLEEADRVYDFLGGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 180
           NDSTQYAKLEEADRVYDFL GLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG
Sbjct: 306 NDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 365

Query: 181 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 240
           VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS
Sbjct: 366 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 425

Query: 241 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 283
           NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG
Sbjct: 426 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 467

[Close]

BLAST of IVF0002269.2 vs. ExPASy TrEMBL
Match: A0A5A7TVI6 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004330 PE=4 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 8.9e-162
Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 60
           MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD
Sbjct: 186 MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 245

Query: 61  LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 120
           LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP
Sbjct: 246 LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 305

Query: 121 NDSTQYAKLEEADRVYDFLGGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 180
           NDSTQYAKLEEADRVYDFL GLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG
Sbjct: 306 NDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 365

Query: 181 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 240
           VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS
Sbjct: 366 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 425

Query: 241 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 283
           NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG
Sbjct: 426 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 467

[Close]

BLAST of IVF0002269.2 vs. ExPASy TrEMBL
Match: A0A5A7TW20 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1059G00260 PE=4 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 8.9e-162
Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 60
           MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD
Sbjct: 186 MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 245

Query: 61  LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 120
           LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP
Sbjct: 246 LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 305

Query: 121 NDSTQYAKLEEADRVYDFLGGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 180
           NDSTQYAKLEEADRVYDFL GLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG
Sbjct: 306 NDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 365

Query: 181 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 240
           VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS
Sbjct: 366 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 425

Query: 241 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 283
           NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG
Sbjct: 426 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 467

[Close]

BLAST of IVF0002269.2 vs. ExPASy TrEMBL
Match: A0A5A7UNC5 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold323G00700 PE=4 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 8.9e-162
Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 60
           MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD
Sbjct: 215 MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 274

Query: 61  LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 120
           LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP
Sbjct: 275 LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 334

Query: 121 NDSTQYAKLEEADRVYDFLGGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 180
           NDSTQYAKLEEADRVYDFL GLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG
Sbjct: 335 NDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 394

Query: 181 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 240
           VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS
Sbjct: 395 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 454

Query: 241 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 283
           NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG
Sbjct: 455 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 496

[Close]

BLAST of IVF0002269.2 vs. NCBI nr
Match: KAA0059998.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 568 bits (1464), Expect = 7.11e-196
Identity = 278/282 (98.58%), Postives = 278/282 (98.58%), Query Frame = 0


Query: 1   MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 60
           MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD
Sbjct: 1   MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 60

Query: 61  LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 120
           LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP
Sbjct: 61  LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 120

Query: 121 NDSTQYAKLEEADRVYDFLGGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 180
           NDSTQYAKLEEADRVYDFL GLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG
Sbjct: 121 NDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 180

Query: 181 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 240
           VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKK SS
Sbjct: 181 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKWSS 240

Query: 241 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 282
           NEKQNSGRAYISETTPASTSQSTDPT SQTKT TLGAIAQSG
Sbjct: 241 NEKQNSGRAYISETTPASTSQSTDPTASQTKTSTLGAIAQSG 282

[Close]

BLAST of IVF0002269.2 vs. NCBI nr
Match: KAA0035089.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 555 bits (1431), Expect = 4.53e-192
Identity = 273/282 (96.81%), Postives = 274/282 (97.16%), Query Frame = 0


Query: 1   MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 60
           MFLEGRYQFGFLTGET+RPP GDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD
Sbjct: 1   MFLEGRYQFGFLTGETIRPPLGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 60

Query: 61  LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 120
           LWDTTQTLYSKRQNASRLYTLRKQVHNCKQ TLDVTTYFNKLSLLWQEMDLCRETVWDTP
Sbjct: 61  LWDTTQTLYSKRQNASRLYTLRKQVHNCKQRTLDVTTYFNKLSLLWQEMDLCRETVWDTP 120

Query: 121 NDSTQYAKLEEADRVYDFLGGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 180
           NDSTQYAKLEEADRVYDFL GLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG
Sbjct: 121 NDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 180

Query: 181 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 240
           VLTTPTIDSAAFSARSS HDSDKNNGKSI VCEHCKKQWHTKDQCWKLH RPPGGKKRSS
Sbjct: 181 VLTTPTIDSAAFSARSSKHDSDKNNGKSILVCEHCKKQWHTKDQCWKLHSRPPGGKKRSS 240

Query: 241 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 282
           NEKQNS RAYISETTPASTSQSTDPT SQTKTPTLGAIAQSG
Sbjct: 241 NEKQNSRRAYISETTPASTSQSTDPTASQTKTPTLGAIAQSG 282

[Close]

BLAST of IVF0002269.2 vs. NCBI nr
Match: KAA0061447.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 576 bits (1484), Expect = 2.82e-191
Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 60
           MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD
Sbjct: 227 MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 286

Query: 61  LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 120
           LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP
Sbjct: 287 LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 346

Query: 121 NDSTQYAKLEEADRVYDFLGGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 180
           NDSTQYAKLEEADRVYDFL GLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG
Sbjct: 347 NDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 406

Query: 181 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 240
           VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS
Sbjct: 407 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 466

Query: 241 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 282
           NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG
Sbjct: 467 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 508

[Close]

BLAST of IVF0002269.2 vs. NCBI nr
Match: TYK03374.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 572 bits (1474), Expect = 9.56e-191
Identity = 279/282 (98.94%), Postives = 279/282 (98.94%), Query Frame = 0


Query: 1   MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 60
           MFLEGRYQFGFLTGE VRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYA TAKD
Sbjct: 1   MFLEGRYQFGFLTGEIVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYATTAKD 60

Query: 61  LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 120
           LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP
Sbjct: 61  LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 120

Query: 121 NDSTQYAKLEEADRVYDFLGGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 180
           NDSTQYAKLEEADRVYDFL GLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG
Sbjct: 121 NDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 180

Query: 181 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 240
           VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS
Sbjct: 181 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 240

Query: 241 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 282
           NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG
Sbjct: 241 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 282

[Close]

BLAST of IVF0002269.2 vs. NCBI nr
Match: KAA0059259.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 572 bits (1474), Expect = 9.56e-191
Identity = 279/282 (98.94%), Postives = 279/282 (98.94%), Query Frame = 0


Query: 1   MFLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKD 60
           MFLEGRYQFGFLTGE VRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYA TAKD
Sbjct: 1   MFLEGRYQFGFLTGEIVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYATTAKD 60

Query: 61  LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 120
           LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP
Sbjct: 61  LWDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTP 120

Query: 121 NDSTQYAKLEEADRVYDFLGGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 180
           NDSTQYAKLEEADRVYDFL GLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG
Sbjct: 121 NDSTQYAKLEEADRVYDFLAGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDRTNAMG 180

Query: 181 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 240
           VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS
Sbjct: 181 VLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKKQWHTKDQCWKLHGRPPGGKKRSS 240

Query: 241 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 282
           NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG
Sbjct: 241 NEKQNSGRAYISETTPASTSQSTDPTVSQTKTPTLGAIAQSG 282

[Close]

BLAST of IVF0002269.2 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-14
Identity = 50/170 (29.41%), Postives = 90/170 (52.94%), Query Frame = 0


Query: 2   FLEGRYQFGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKDL 61
           FL    +FGF+ G   +P P   L + W+  ++++   L+NSM  ++ + ++YA TA  +
Sbjct: 52  FLRVTKKFGFIDGTLPKPDPFSPLYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKM 111

Query: 62  WDTTQTLYSKRQNASRLYTLRKQVHNCKQGTLDVTTYFNKLSLLWQEMD----LCRETVW 121
           W+  + ++    +  ++Y LR+++   +QG   V  YF KLS +W E+     +      
Sbjct: 112 WEDLRRVFVPCVDL-KIYQLRRRLATLRQGGDSVEEYFGKLSKVWMELSEYAPIPECKCG 171

Query: 122 DTPNDSTQYA-KLEEADRVYDFLGG--LNPKFDNVCGRILGQRPLPSLME 165
               + T+ A +  E ++ Y+FL G  LN  F+ V  +I+ Q+P PSL E
Sbjct: 172 GCNCECTKRAEEAREKEQRYEFLMGLKLNQGFEAVTTKIMFQKPPPSLHE 220

[Close]

BLAST of IVF0002269.2 vs. TAIR 10
Match: AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 3.9e-08
Identity = 40/158 (25.32%), Postives = 71/158 (44.94%), Query Frame = 0


Query: 21  PGDALERLWKGEDSLIRSMLINSMEP-QIGKPLLYAATAKDLWDTTQTLYSKRQNASRLY 80
           P +A +  W+  D +++  L  ++ P Q     + ++T++D+W   +  +   ++A R  
Sbjct: 57  PTNANDVNWQKRDGIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDA-RAL 116

Query: 81  TLRKQVHNCKQGTLDVTTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADR--VYD 140
            L  ++     G + V  Y+ K+  L                DS +   +   DR  V  
Sbjct: 117 RLDSELRTKDIGDMRVADYYRKMKKL---------------ADSLRNVDVPVTDRNLVMY 176

Query: 141 FLGGLNPKFDNVCGRILGQRPLPSLMEVCFEVRLEEDR 176
            L GLNPKFDN+   I  ++P PS  +    ++ EEDR
Sbjct: 177 VLNGLNPKFDNIINVIKHRQPFPSFDDAATMLQEEEDR 198

The following BLAST results are available for this feature:

BLAST of IVF0002269.2 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0002269.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VLQ7	8.9e-162	99.65	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]
A0A5A7SQW1	8.9e-162	99.65	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G0...	[more]
A0A5A7TVI6	8.9e-162	99.65	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G0...	[more]
A0A5A7TW20	8.9e-162	99.65	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1059G...	[more]
A0A5A7UNC5	8.9e-162	99.65	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold323G0...	[more]

BLAST of IVF0002269.2 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059998.1	7.11e-196	98.58	putative polyprotein [Cucumis melo var. makuwa]	[more]
KAA0035089.1	4.53e-192	96.81	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0061447.1	2.82e-191	99.65	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK03374.1	9.56e-191	98.94	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0059259.1	9.56e-191	98.94	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of IVF0002269.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21280.1	1.2e-14	29.41	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha...	[more]
AT1G34070.1	3.9e-08	25.32	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 29..116 e-value: 3.9E-8 score: 33.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..271
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 57..262
None	No IPR available	PANTHER	PTHR34222:SF37	SUBFAMILY NOT NAMED	coord: 57..262

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0002269	IVF0002269	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0002269.2-exon	IVF0002269.2-exon-chr10:2763248..2763288	exon
IVF0002269.2-exon	IVF0002269.2-exon-chr10:2764220..2765976	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0002269.2-cds	IVF0002269.2-cds-chr10:2763248..2763288	CDS
IVF0002269.2-cds	IVF0002269.2-cds-chr10:2764220..2765063	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0002269.2-five_prime_utr	IVF0002269.2-five_prime_utr-chr10:2765064..2765976	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0002269.2	IVF0002269.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding