IVF0001998.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0001998.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2
Location	tig00001945: 135906 .. 137935 (+)
Sequence length	276
RNA-Seq Expression	IVF0001998.1
Synteny	IVF0001998.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCGCTTGCCAAGAATTGCGAGCAGAATCTCTCAATCCTCATTCCGAACATTCGTCCGTACGAATTCTTCCGCCAAATCTTCATCTTCTCAGTTCCCTCTACCTTCCAAATCCACTGCTCCGTCTGTTCGCCGATTCTCGCTCGCCCGGTATCTTTCTTTTGATCCTTTCCTTTCTCCTTGTTTCAATTTTTTCTCTTTGCTCTTTTACGAACCTTCTTTATCTACTGTTAGGTCTCCGTCGGAGCTGGGATGTGTTCAATCCCTTTTGCCATTTCACGACGCGGTTGCTGGAGCGAGAATGATTTCGTGTCTGAGTACGAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTATTCTCTGCTGCACCTCTCCCGGCCTCTAACATGAAATATTATGCTTTCTTTTGAAGTGTGAGTAGCTTTTTTATGCATTAATCTACAGACTTCCCCTTTTTATTGCTCTACAATTTGTTTGTCTGTGTCCTTTTTGTGTTGGTATTTGCTGATTCTTTTTGTCTCTGTCATTGTTGTGTTGTTCCAAAAATCTTGCAGCTTCTGTATGGAGTGGAACATTCTGTTAAAATTGGTAAATTTTAAGTTAAGCAGTCTAGAATATTGGATTGTTGCTTATACTTAAGGAGGTTGTTGGCGTAGTTATGTAAAAGATGGGAGGCTAATCTAGAACGTTGAAGTTAACCATCTTGGGAAGAGAAACCATCGTAGATTTGGTCCTTTCCCTTGCCTTCGGTATCTAGTTTCATTGTTTATTGGTTTCAACTTTTGTCCCCCAGTTCAATTGGTCGTTTTGTTGAGTAAGATTAGTTATTAGAACTGGAATGGAATGAATGGAATGGGTTTGGTTGTTGACTGGGGACCTTGAAACTGACTGGAGTATTTGGTTCCTGCAGGCACATAATATCATTTGTCAATATGCTTGAAAGAAATAGATTGGGAATCTACGGAGCATCCGATTATGGTGCAGTGAATCGATTTCAAGTACGAAACTAATCATCTTTTAGTCGTCCTAAAATGTTGAAGATATTCCAATTTCTATTATTGTGAGGAACTAGCGGTCTCTGTCAGTGTTGGGTCGACACTGCTTTTAATAACGATTTGAAAAATAGTAGTCTCACATACTTCCTCGTTCAGCAGTAATCAATTCCTGAATCGTTAAATCTTAAGAGTTTCCCTTGGAAAACTTTGACTTGAAGAGTGAACTGCCAAATTTAGGAGAATGGAATGAAAAATTAGGTTTGCCCATCAATCAGCTTAGTCTCTGCGATCTAGCTATCATCATCCTGAAAGAAAACTTTATCTTGGACAAGAGTCTATTCTATTCTTTTGGAGATCATTCCATTAGATTAAAGGGATGATCCAGTCCAGTCAATAGTTTTAGTTAATTGTAAATCCGTTATGTGAAGTAAGCTTTGTTTGTTCGATGATCTGCATCATTCTTGTTTACATCACTTGTGTGTAGCTCACAGATAATCTTATGATTGTTCTTATCATTCAACCCATTAGTTTTCTTTTGTCAAATAATCTATATGACATAACTTCTCATTGCCTCAGATGCAATTGATGGTACGTGAGACATATTTGCTGTTTTTGAAGGTGGGCCAGTCACTCTATGCTTCAGTAATCTAGAAATATCACTTTTGAGTGATGTGTAAATGGTTCAGCATTAGTTCTTAGTGCCTTTAGTTTACCTTGTGTAAATTTAATGAAACCCATCTCATACTCCTTTATTCCTGTGCCAATTCATGCACACCTCAACTAATCTTATAGGACAATAATACAATTGTCTAACTCAGAAAGTATCTATTACTCGAGAATCCTCTTTATTGGTTAGCATTGTTGACGTTTGTGTATGGTCAACTAGATGTTGCATCAGTTATATTGAATGGGTGATGAGTCATGTTGCATTTTGGACTCTTGGTAGAAATCTACCGATATTCTTAGTCACTTTTCTTATTTTGTATTTGTATTCTGTGGCTGCAGAGTTAGGTTTATCCGTTCCAAGGTGA

mRNA sequence

ATGGCTTCCGCTTGCCAAGAATTGCGAGCAGAATCTCTCAATCCTCATTCCGAACATTCGTCCGTACGAATTCTTCCGCCAAATCTTCATCTTCTCAGTTCCCTCTACCTTCCAAATCCACTGCTCCGTCTGTCTCCGTCGGAGCTGGGATGTGTTCAATCCCTTTTGCCATTTCACGACGCGGTTGCTGGAGCGAGAATGATTTCGTGTCTGAGTACGAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGAGTTAGGTTTATCCGTTCCAAGGTGA

Coding sequence (CDS)

ATGGCTTCCGCTTGCCAAGAATTGCGAGCAGAATCTCTCAATCCTCATTCCGAACATTCGTCCGTACGAATTCTTCCGCCAAATCTTCATCTTCTCAGTTCCCTCTACCTTCCAAATCCACTGCTCCGTCTGTCTCCGTCGGAGCTGGGATGTGTTCAATCCCTTTTGCCATTTCACGACGCGGTTGCTGGAGCGAGAATGATTTCGTGTCTGAGTACGAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGAGTTAGGTTTATCCGTTCCAAGGTGA

Protein sequence

MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNPLLRLSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR

Homology

[Close]

BLAST of IVF0001998.1 vs. ExPASy TrEMBL
Match: A0A6J1KTL9 (uncharacterized protein LOC111498548 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498548 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.2e-17
Identity = 61/100 (61.00%), Postives = 67/100 (67.00%), Query Frame = 0


Query: 1  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNP---------LLRLSPSELGC 60
          MASACQ + A  L+  S  + +R   P     S   LP+           L  SPSELGC
Sbjct: 1  MASACQRI-ASRLSQSSFRTVLRTNSPPKSPSSKFSLPSKSSAPSVSRFSLARSPSELGC 60

Query: 61 VQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR 92
          VQSLLPFH+AVAGARMISCLSTNSRSCRALSQELGLSVPR
Sbjct: 61 VQSLLPFHNAVAGARMISCLSTNSRSCRALSQELGLSVPR 99

[Close]

BLAST of IVF0001998.1 vs. ExPASy TrEMBL
Match: A0A1S3BL94 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490878 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.4e-17
Identity = 61/100 (61.00%), Postives = 66/100 (66.00%), Query Frame = 0


Query: 1  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNP---------LLRLSPSELGC 60
          MASACQ + A  ++  S  + VR         S   LP+           L  SPSELGC
Sbjct: 1  MASACQRI-ASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGC 60

Query: 61 VQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR 92
          VQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
Sbjct: 61 VQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR 99

[Close]

BLAST of IVF0001998.1 vs. ExPASy TrEMBL
Match: A0A6J1DKL6 (uncharacterized protein LOC111021400 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021400 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.1e-17
Identity = 60/100 (60.00%), Postives = 67/100 (67.00%), Query Frame = 0


Query: 1  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNP---------LLRLSPSELGC 60
          MASAC  + A  ++  S  ++VR   P     S   LP+           L  SPSELGC
Sbjct: 1  MASACHRI-ASRISQSSFRAAVRTQSPVKSPSSPFPLPSKSTAPSVRRFSLARSPSELGC 60

Query: 61 VQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR 92
          VQSLLPFH+AVAGARMISCLSTNSRSCRALSQELGLSVPR
Sbjct: 61 VQSLLPFHNAVAGARMISCLSTNSRSCRALSQELGLSVPR 99

[Close]

BLAST of IVF0001998.1 vs. ExPASy TrEMBL
Match: A0A6J1FBC3 (uncharacterized protein LOC111444048 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444048 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.6e-16
Identity = 60/100 (60.00%), Postives = 67/100 (67.00%), Query Frame = 0


Query: 1  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNP---------LLRLSPSELGC 60
          MASAC+ + A  ++  S  + +R   P     SS  LP            L  SPSELGC
Sbjct: 1  MASACRRI-ASRISQSSFRTLLRTNSPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGC 60

Query: 61 VQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR 92
          VQSLLPFH+AVAGARMISCLSTNSRSCRALSQELGLSVPR
Sbjct: 61 VQSLLPFHNAVAGARMISCLSTNSRSCRALSQELGLSVPR 99

[Close]

BLAST of IVF0001998.1 vs. ExPASy TrEMBL
Match: A0A6J1HQE3 (uncharacterized protein LOC111465140 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465140 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.6e-16
Identity = 60/100 (60.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 1  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLP----NPLLRL-----SPSELGC 60
          MASAC+ + A  ++  S  + VR   P     S   LP     P +R      +PSELGC
Sbjct: 1  MASACRRI-ASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLAGAPSELGC 60

Query: 61 VQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR 92
          VQSLLPFH+AVAGARMISCLSTNSRSCRALSQELGLSVPR
Sbjct: 61 VQSLLPFHNAVAGARMISCLSTNSRSCRALSQELGLSVPR 99

[Close]

BLAST of IVF0001998.1 vs. NCBI nr
Match: XP_023005612.1 (uncharacterized protein LOC111498548 isoform X1 [Cucurbita maxima])

HSP 1 Score: 98.2 bits (243), Expect = 2.40e-24
Identity = 61/100 (61.00%), Postives = 67/100 (67.00%), Query Frame = 0


Query: 1  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNPL---------LRLSPSELGC 60
          MASACQ + A  L+  S  + +R   P     S   LP+           L  SPSELGC
Sbjct: 1  MASACQRI-ASRLSQSSFRTVLRTNSPPKSPSSKFSLPSKSSAPSVSRFSLARSPSELGC 60

Query: 61 VQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR 91
          VQSLLPFH+AVAGARMISCLSTNSRSCRALSQELGLSVPR
Sbjct: 61 VQSLLPFHNAVAGARMISCLSTNSRSCRALSQELGLSVPR 99

[Close]

BLAST of IVF0001998.1 vs. NCBI nr
Match: XP_008448836.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 97.4 bits (241), Expect = 4.83e-24
Identity = 62/100 (62.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 1  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPN----PLLRL-----SPSELGC 60
          MASACQ + A  ++  S  + VR         S   LP+    P +R      SPSELGC
Sbjct: 1  MASACQRI-ASRISQSSFRTFVRTNSSAKSSSSQFPLPSKSTAPSVRRFSLARSPSELGC 60

Query: 61 VQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR 91
          VQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
Sbjct: 61 VQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR 99

[Close]

BLAST of IVF0001998.1 vs. NCBI nr
Match: XP_022154047.1 (uncharacterized protein LOC111021400 isoform X2 [Momordica charantia])

HSP 1 Score: 97.1 bits (240), Expect = 6.86e-24
Identity = 61/100 (61.00%), Postives = 69/100 (69.00%), Query Frame = 0


Query: 1  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPN----PLLRL-----SPSELGC 60
          MASAC  + A  ++  S  ++VR   P     S   LP+    P +R      SPSELGC
Sbjct: 1  MASACHRI-ASRISQSSFRAAVRTQSPVKSPSSPFPLPSKSTAPSVRRFSLARSPSELGC 60

Query: 61 VQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR 91
          VQSLLPFH+AVAGARMISCLSTNSRSCRALSQELGLSVPR
Sbjct: 61 VQSLLPFHNAVAGARMISCLSTNSRSCRALSQELGLSVPR 99

[Close]

BLAST of IVF0001998.1 vs. NCBI nr
Match: XP_004147214.1 (uncharacterized protein LOC101221008 isoform X2 [Cucumis sativus])

HSP 1 Score: 97.1 bits (240), Expect = 6.86e-24
Identity = 62/100 (62.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 1  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPN----PLLRL-----SPSELGC 60
          MASACQ + A  ++  S  + VR         S   LP+    P +R      SPSELGC
Sbjct: 1  MASACQRI-ASRISQSSFRTFVRTNSSAKSSSSPFPLPSKSTAPSVRRFSLARSPSELGC 60

Query: 61 VQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR 91
          VQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR
Sbjct: 61 VQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR 99

[Close]

BLAST of IVF0001998.1 vs. NCBI nr
Match: XP_023538758.1 (uncharacterized protein LOC111799595 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023538760.1 uncharacterized protein LOC111799595 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 96.7 bits (239), Expect = 9.73e-24
Identity = 60/100 (60.00%), Postives = 67/100 (67.00%), Query Frame = 0


Query: 1  MASACQELRAESLNPHSEHSSVRILPPNLHLLSSLYLPNPL---------LRLSPSELGC 60
          MASAC+ + A  ++  S  + +R   P     SS  LP            L  SPSELGC
Sbjct: 1  MASACRRI-ASRISQSSFRTLLRTASPAKSPSSSFPLPPKSSAPSVSRFSLARSPSELGC 60

Query: 61 VQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR 91
          VQSLLPFH+AVAGARMISCLSTNSRSCRALSQELGLSVPR
Sbjct: 61 VQSLLPFHNAVAGARMISCLSTNSRSCRALSQELGLSVPR 99

[Close]

BLAST of IVF0001998.1 vs. TAIR 10
Match: AT5G47455.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.2); Has 138 Blast hits to 138 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 138; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 3.3e-14
Identity = 40/57 (70.18%), Postives = 44/57 (77.19%), Query Frame = 0


Query: 39  NPLLRLS----PSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR 92
           +PL R S    PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+QE+GLSVPR
Sbjct: 50  SPLPRFSFSRCPSELGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALTQEMGLSVPR 106

[Close]

BLAST of IVF0001998.1 vs. TAIR 10
Match: AT4G17310.2 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 5.6e-14
Identity = 52/98 (53.06%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 1  MASACQELRAESLNPHSEHSSVRILPPNLHLLSS--LYLPNPLLR-----LSPSELGCVQ 60
          MASAC++L     +  S  S++R    +    SS    LP+   R       PSELGCVQ
Sbjct: 1  MASACRKL-FNRASVSSLKSTLRSTTGSTSAASSAGFRLPSQPTRHFSFSRCPSELGCVQ 60

Query: 61 SLLPFHDAVAGARMISCLSTNSRSCRALSQELGLSVPR 92
          SLLP H  VA AR+ SCLST SRS RALSQELGLSVPR
Sbjct: 61 SLLPLHSTVAAARLTSCLSTTSRSSRALSQELGLSVPR 97

[Close]

BLAST of IVF0001998.1 vs. TAIR 10
Match: AT5G47455.5 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.2); Has 132 Blast hits to 132 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 3.7e-10
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = 0


Query: 39 NPLLRLS----PSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQE 85
          +PL R S    PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+Q+
Sbjct: 50 SPLPRFSFSRCPSELGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALTQD 99

[Close]

BLAST of IVF0001998.1 vs. TAIR 10
Match: AT5G47455.4 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.2); Has 125 Blast hits to 125 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 3.7e-10
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = 0


Query: 39 NPLLRLS----PSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQE 85
          +PL R S    PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+Q+
Sbjct: 50 SPLPRFSFSRCPSELGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALTQD 99

[Close]

BLAST of IVF0001998.1 vs. TAIR 10
Match: AT5G47455.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.2); Has 132 Blast hits to 132 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 3.7e-10
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = 0


Query: 39 NPLLRLS----PSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQE 85
          +PL R S    PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+Q+
Sbjct: 50 SPLPRFSFSRCPSELGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALTQD 99

The following BLAST results are available for this feature:

BLAST of IVF0001998.1 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0001998.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KTL9	3.2e-17	61.00	uncharacterized protein LOC111498548 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3BL94	5.4e-17	61.00	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 OS=Cu...	[more]
A0A6J1DKL6	7.1e-17	60.00	uncharacterized protein LOC111021400 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1FBC3	1.6e-16	60.00	uncharacterized protein LOC111444048 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HQE3	4.6e-16	60.00	uncharacterized protein LOC111465140 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of IVF0001998.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005612.1	2.40e-24	61.00	uncharacterized protein LOC111498548 isoform X1 [Cucurbita maxima]	[more]
XP_008448836.1	4.83e-24	62.00	PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isofo...	[more]
XP_022154047.1	6.86e-24	61.00	uncharacterized protein LOC111021400 isoform X2 [Momordica charantia]	[more]
XP_004147214.1	6.86e-24	62.00	uncharacterized protein LOC101221008 isoform X2 [Cucumis sativus]	[more]
XP_023538758.1	9.73e-24	60.00	uncharacterized protein LOC111799595 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of IVF0001998.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47455.3	3.3e-14	70.18	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G17310.2	5.6e-14	53.06	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPR...	[more]
AT5G47455.5	3.7e-10	66.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G47455.4	3.7e-10	66.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G47455.2	3.7e-10	66.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 40..85
None	No IPR available	PANTHER	PTHR33156:SF9	OS02G0658300 PROTEIN	coord: 40..85

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0001998	IVF0001998	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0001998.1-exon	IVF0001998.1-exon-tig00001945:135906..136036	exon
IVF0001998.1-exon	IVF0001998.1-exon-tig00001945:136144..136262	exon
IVF0001998.1-exon	IVF0001998.1-exon-tig00001945:137910..137935	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0001998.1-cds	IVF0001998.1-cds-tig00001945:135906..136036	CDS
IVF0001998.1-cds	IVF0001998.1-cds-tig00001945:136144..136262	CDS
IVF0001998.1-cds	IVF0001998.1-cds-tig00001945:137910..137935	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0001998.1	IVF0001998.1-protein	polypeptide