IVF0000932.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0000932.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	DNA-directed RNA polymerase II subunit 1-like
Location	tig00195367: 336719 .. 338222 (+)
Sequence length	1031
RNA-Seq Expression	IVF0000932.1
Synteny	IVF0000932.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATTTTCAATTTTTTCATTTTATTTGCTACAAAACTATTATGGCGAATCTTCCTCGCTTTGGCCGTGCACGGCAACGTCTTCCTGCGGTGCCGCCGCCAGTTCCCGCCGCAGCACAGCCTGCTGTCGAACCCAGGTATCAAATTCTGCCGTTTGCTACGACCATCACTACGCCCGCCCCGGCTTCTCCTCGGAGAGAATCCCCTCGCCCGCTTTCTTCTCCACCGAAGAAAGCCACGTCACCGTTTGCATCACCAAAATATGGAGATTCTCGCACACGTTTGGACAGATCGCCGGCGGCGAAGGCCACAATGTCGCCTCCGGATTCGGTTAGAGATAAATATTTTGAGAGGAGGAATGGGGAAACAACCCCACCTCTGTCGCCGGCCAAGTCCCGGCGAGCAAAGACGCCGCCGCTTTCTCCTCTTGCTCTGCCACGTAACCAAGTGTTTACCGGGAACGGGACGACGGCTCAACCCAGGTATATTAACTTAATTCTCAATTAAATATATTTGTCTTTTCGTCGTTAAGCTCACTTTTGGAAATGTATATTTATTCAACTTTTGTCAATTGTTAGGCCAATTAATTGACTTTGACTTATTGACCATGGTTCATTTTCACATGTACCCATTATACTAAAACACTTTCATATTTGTTACAAAATTTATGACTAAATTATAACGAATGTTCTTCAGAAAAATCTTTATACTTCCCATTTTGCAATATTAACTCCAAACCCAGTGAATATTTCAAAACTATCCTTAGGGTAGTGTAAGTTCTTTAGAAAATTTATACAAAAATCAAGATTTAGAATGGTATGTATGACTTAAAACAACGTTTATAAATTCAATTTTTTATTTCATATTACTTATCACACTTTTATATTAAAAAGTTTCGCTGCTTTTCTAAAACTTTTAAGAAACTTTTATTAATGATTCATATGGTCAATATCAGGGTTCAACCGGAGGTGGAGACCAAAGGCATTGTATACAACAAGACCGTTGAGAAGCCATCGAAGTCAAACCGGTCGTCGGGCGAGTACGGCTCCAGCAAGTCACACCAAAAGAAGCAGAAGCCGGAGGTTATAAAACTCAAAGGACATAACGTTGGCGCCGTCATGGAAATAAACAAGTCATCCACTGGCTATCGTTTGGGCGGAGAAACCTTAAAAAAGAACGAAACAGAAGACGTCGGCGATGTCCATGGATATGGACATGAAGATAAGAAAACGGAGACAAAGAAGAAGGAACCGCCGATAACCGCATTTATGAATAGTAATTTTCAGAGTGTAAACAATTCTCTTCTGTTCGACTCGTCGTGCAACCACCGTGATCCTGGCCTGCATCTCGCGTTTCCCGATGCGGTGGATGGTGATGGAGCCATTGTTGACGGCCAGAAGAGTTACAAGCCCAAGCGTCAGTGAGGTTGGACGGAGAGAAGTAGTACTATGTTATTATTATATGAAATAAGCCATTTAAGGGTTGTATCGATATTTATGTAACCAT

mRNA sequence

CTATTTTCAATTTTTTCATTTTATTTGCTACAAAACTATTATGGCGAATCTTCCTCGCTTTGGCCGTGCACGGCAACGTCTTCCTGCGGTGCCGCCGCCAGTTCCCGCCGCAGCACAGCCTGCTGTCGAACCCAGGTATCAAATTCTGCCGTTTGCTACGACCATCACTACGCCCGCCCCGGCTTCTCCTCGGAGAGAATCCCCTCGCCCGCTTTCTTCTCCACCGAAGAAAGCCACGTCACCGTTTGCATCACCAAAATATGGAGATTCTCGCACACGTTTGGACAGATCGCCGGCGGCGAAGGCCACAATGTCGCCTCCGGATTCGGTTAGAGATAAATATTTTGAGAGGAGGAATGGGGAAACAACCCCACCTCTGTCGCCGGCCAAGTCCCGGCGAGCAAAGACGCCGCCGCTTTCTCCTCTTGCTCTGCCACGTAACCAAGTGTTTACCGGGAACGGGACGACGGCTCAACCCAGGGTTCAACCGGAGGTGGAGACCAAAGGCATTGTATACAACAAGACCGTTGAGAAGCCATCGAAGTCAAACCGGTCGTCGGGCGAGTACGGCTCCAGCAAGTCACACCAAAAGAAGCAGAAGCCGGAGGTTATAAAACTCAAAGGACATAACGTTGGCGCCGTCATGGAAATAAACAAGTCATCCACTGGCTATCGTTTGGGCGGAGAAACCTTAAAAAAGAACGAAACAGAAGACGTCGGCGATGTCCATGGATATGGACATGAAGATAAGAAAACGGAGACAAAGAAGAAGGAACCGCCGATAACCGCATTTATGAATAGTAATTTTCAGAGTGTAAACAATTCTCTTCTGTTCGACTCGTCGTGCAACCACCGTGATCCTGGCCTGCATCTCGCGTTTCCCGATGCGGTGGATGGTGATGGAGCCATTGTTGACGGCCAGAAGAGTTACAAGCCCAAGCGTCAGTGAGGTTGGACGGAGAGAAGTAGTACTATGTTATTATTATATGAAATAAGCCATTTAAGGGTTGTATCGATATTTATGTAACCAT

Coding sequence (CDS)

ATGGCGAATCTTCCTCGCTTTGGCCGTGCACGGCAACGTCTTCCTGCGGTGCCGCCGCCAGTTCCCGCCGCAGCACAGCCTGCTGTCGAACCCAGGTATCAAATTCTGCCGTTTGCTACGACCATCACTACGCCCGCCCCGGCTTCTCCTCGGAGAGAATCCCCTCGCCCGCTTTCTTCTCCACCGAAGAAAGCCACGTCACCGTTTGCATCACCAAAATATGGAGATTCTCGCACACGTTTGGACAGATCGCCGGCGGCGAAGGCCACAATGTCGCCTCCGGATTCGGTTAGAGATAAATATTTTGAGAGGAGGAATGGGGAAACAACCCCACCTCTGTCGCCGGCCAAGTCCCGGCGAGCAAAGACGCCGCCGCTTTCTCCTCTTGCTCTGCCACGTAACCAAGTGTTTACCGGGAACGGGACGACGGCTCAACCCAGGGTTCAACCGGAGGTGGAGACCAAAGGCATTGTATACAACAAGACCGTTGAGAAGCCATCGAAGTCAAACCGGTCGTCGGGCGAGTACGGCTCCAGCAAGTCACACCAAAAGAAGCAGAAGCCGGAGGTTATAAAACTCAAAGGACATAACGTTGGCGCCGTCATGGAAATAAACAAGTCATCCACTGGCTATCGTTTGGGCGGAGAAACCTTAAAAAAGAACGAAACAGAAGACGTCGGCGATGTCCATGGATATGGACATGAAGATAAGAAAACGGAGACAAAGAAGAAGGAACCGCCGATAACCGCATTTATGAATAGTAATTTTCAGAGTGTAAACAATTCTCTTCTGTTCGACTCGTCGTGCAACCACCGTGATCCTGGCCTGCATCTCGCGTTTCCCGATGCGGTGGATGGTGATGGAGCCATTGTTGACGGCCAGAAGAGTTACAAGCCCAAGCGTCAGTGA

Protein sequence

MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSSPPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRRAKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSKSHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKKTETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKSYKPKRQ

Homology

[Close]

BLAST of IVF0000932.1 vs. ExPASy TrEMBL
Match: A0A5A7TZ24 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00760 PE=4 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 6.8e-165
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0


Query: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60
           MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS
Sbjct: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60

Query: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120
           PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR
Sbjct: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120

Query: 121 AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSK 180
           AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSK
Sbjct: 121 AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSK 180

Query: 181 SHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKKTE 240
           SHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKKTE
Sbjct: 181 SHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKKTE 240

Query: 241 TKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKSYKPK 300
           TKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKSYKPK
Sbjct: 241 TKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKSYKPK 300

Query: 301 RQ 303
           RQ
Sbjct: 301 RQ 302

[Close]

BLAST of IVF0000932.1 vs. ExPASy TrEMBL
Match: A0A1S3AV38 (zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 6.8e-165
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0


Query: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60
           MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS
Sbjct: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60

Query: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120
           PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR
Sbjct: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120

Query: 121 AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSK 180
           AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSK
Sbjct: 121 AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSK 180

Query: 181 SHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKKTE 240
           SHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKKTE
Sbjct: 181 SHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKKTE 240

Query: 241 TKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKSYKPK 300
           TKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKSYKPK
Sbjct: 241 TKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKSYKPK 300

Query: 301 RQ 303
           RQ
Sbjct: 301 RQ 302

[Close]

BLAST of IVF0000932.1 vs. ExPASy TrEMBL
Match: A0A0A0L320 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119300 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 2.0e-124
Identity = 245/302 (81.13%), Postives = 263/302 (87.09%), Query Frame = 0


Query: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60
           MANLPR GR RQRL +VPPPVPAAAQPAVEP+Y+ +P+AT+ITTPAPASPRRESPRPLSS
Sbjct: 1   MANLPRLGRTRQRLSSVPPPVPAAAQPAVEPKYETMPYATSITTPAPASPRRESPRPLSS 60

Query: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120
           P KKATSPFAS        R+D SPAAKAT SPPDS+ DKY ERRNGETTPPL+PAKSR 
Sbjct: 61  PSKKATSPFAS--------RVDSSPAAKATRSPPDSIGDKYLERRNGETTPPLTPAKSRP 120

Query: 121 AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTV-EKPSKSNRSSGEYGSS 180
           AKT PLSPLALPR+QV TGNGTTAQPRVQPEVETKGIVYNK   EKPSKSNR S E+GS 
Sbjct: 121 AKTSPLSPLALPRSQVITGNGTTAQPRVQPEVETKGIVYNKAADEKPSKSNRQS-EHGSG 180

Query: 181 KS-HQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKK 240
           KS HQK+QKP V+KLKGHNVGAVME+NKSS GYRLGGETLKK ETED GDV GYGHEDKK
Sbjct: 181 KSVHQKQQKPGVMKLKGHNVGAVMEVNKSSAGYRLGGETLKKKETEDDGDVDGYGHEDKK 240

Query: 241 TETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKSYK 300
           T  KKK PPI+AFMNSNFQSVNNSLLFDSSC HRDPGLHL+FP+A DG GA+VDG KSYK
Sbjct: 241 TGRKKK-PPISAFMNSNFQSVNNSLLFDSSCQHRDPGLHLSFPNAADGGGAVVDGDKSYK 292

[Close]

BLAST of IVF0000932.1 vs. ExPASy TrEMBL
Match: A0A6J1ICG8 (wiskott-Aldrich syndrome protein family member 2-like OS=Cucurbita maxima OX=3661 GN=LOC111473600 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.8e-69
Identity = 166/302 (54.97%), Postives = 198/302 (65.56%), Query Frame = 0


Query: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60
           M+N PRFGR RQR     PPV     PA E + + LPF  T  T  PA            
Sbjct: 1   MSNFPRFGRPRQRPSVAAPPVLPTTLPAAEHKPETLPFYRTSQTLQPA------------ 60

Query: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120
             +K TSP ASPKYG S T +   P AK  +SPP S   KY +R + +T+P  SP++S R
Sbjct: 61  --EKPTSPIASPKYGPSVTLVPSPPPAKDELSPPVSPAKKYPDRLS-QTSPLQSPSRSLR 120

Query: 121 AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSK 180
              PP  PLALP       +G T QPR+Q EVE K IVYNKTVEKP KS+R   EYGS K
Sbjct: 121 TSPPPPPPLALPPTHFTAKDGNTTQPRIQTEVEKKSIVYNKTVEKPVKSDRPL-EYGSGK 180

Query: 181 SHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDK--- 240
           SH+K++  E I L GHNVGAVMEI+K S  +RLGGET++KN+TE  GD    G+E+K   
Sbjct: 181 SHEKQKTAESINLAGHNVGAVMEIDKLSASHRLGGETVRKNKTEG-GDGGRDGNEEKKKK 240

Query: 241 -KTETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKS 299
            K + KKK+ P+TAFMNSNFQSVNNS+L+DSSCNHRDPGLHL F DA DGDGA VDG+K+
Sbjct: 241 EKKDKKKKKVPMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLKFADAADGDGAAVDGRKN 285

[Close]

BLAST of IVF0000932.1 vs. ExPASy TrEMBL
Match: A0A6J1GHE5 (sulfated surface glycoprotein 185-like OS=Cucurbita moschata OX=3662 GN=LOC111454206 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 5.0e-67
Identity = 166/302 (54.97%), Postives = 197/302 (65.23%), Query Frame = 0


Query: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60
           M+N PRFG +RQR     PPV     PA E + +  PF            R +S +P   
Sbjct: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPF----------YKRSQSLQPAEK 60

Query: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKS-R 120
           P    TSP ASPKYG S TR+   P  K  +SPP S   KY +R + +T+P  SP++S R
Sbjct: 61  P----TSPIASPKYGPSVTRVPSPPPPKDELSPPVSPAKKYPDRLS-QTSPLQSPSRSLR 120

Query: 121 RAKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSS 180
            +  PP  PLALP  Q    N TT QPR+QPEVE K IVYNKTVEK  KS+R S EYGS 
Sbjct: 121 TSPPPPPPPLALPPTQFTAVNETTTQPRIQPEVEKKSIVYNKTVEKLVKSDRPS-EYGSG 180

Query: 181 KSHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETED---VGDVHGYGHED 240
           K ++K++  E I L GHNVGAVMEI+KSS G+RLGGET++KNETE     G+      E 
Sbjct: 181 KPYEKQKAVESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEGGGRDGNEEKKKEEK 240

Query: 241 KKTETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKS 299
           KK E KKK  P+TAFMNSNFQSVNNS+L+DSSC+HRDPGLHL F DA DGDGA VDG+KS
Sbjct: 241 KKKEKKKKNVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKS 286

[Close]

BLAST of IVF0000932.1 vs. NCBI nr
Match: XP_008437851.1 (PREDICTED: zyxin-like [Cucumis melo] >KAA0048863.1 zyxin-like [Cucumis melo var. makuwa] >TYK20815.1 zyxin-like [Cucumis melo var. makuwa])

HSP 1 Score: 593 bits (1529), Expect = 1.40e-213
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0


Query: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60
           MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS
Sbjct: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60

Query: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120
           PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR
Sbjct: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120

Query: 121 AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSK 180
           AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSK
Sbjct: 121 AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSK 180

Query: 181 SHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKKTE 240
           SHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKKTE
Sbjct: 181 SHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKKTE 240

Query: 241 TKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKSYKPK 300
           TKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKSYKPK
Sbjct: 241 TKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKSYKPK 300

Query: 301 RQ 302
           RQ
Sbjct: 301 RQ 302

[Close]

BLAST of IVF0000932.1 vs. NCBI nr
Match: XP_004133797.1 (uncharacterized protein LOC101205942 [Cucumis sativus] >KGN56395.1 hypothetical protein Csa_009520 [Cucumis sativus])

HSP 1 Score: 458 bits (1179), Expect = 2.30e-160
Identity = 245/302 (81.13%), Postives = 263/302 (87.09%), Query Frame = 0


Query: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60
           MANLPR GR RQRL +VPPPVPAAAQPAVEP+Y+ +P+AT+ITTPAPASPRRESPRPLSS
Sbjct: 1   MANLPRLGRTRQRLSSVPPPVPAAAQPAVEPKYETMPYATSITTPAPASPRRESPRPLSS 60

Query: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120
           P KKATSPFAS        R+D SPAAKAT SPPDS+ DKY ERRNGETTPPL+PAKSR 
Sbjct: 61  PSKKATSPFAS--------RVDSSPAAKATRSPPDSIGDKYLERRNGETTPPLTPAKSRP 120

Query: 121 AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTV-EKPSKSNRSSGEYGSS 180
           AKT PLSPLALPR+QV TGNGTTAQPRVQPEVETKGIVYNK   EKPSKSNR S E+GS 
Sbjct: 121 AKTSPLSPLALPRSQVITGNGTTAQPRVQPEVETKGIVYNKAADEKPSKSNRQS-EHGSG 180

Query: 181 KS-HQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKK 240
           KS HQK+QKP V+KLKGHNVGAVME+NKSS GYRLGGETLKK ETED GDV GYGHEDKK
Sbjct: 181 KSVHQKQQKPGVMKLKGHNVGAVMEVNKSSAGYRLGGETLKKKETEDDGDVDGYGHEDKK 240

Query: 241 TETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKSYK 300
           T  KKK PPI+AFMNSNFQSVNNSLLFDSSC HRDPGLHL+FP+A DG GA+VDG KSYK
Sbjct: 241 TGRKKK-PPISAFMNSNFQSVNNSLLFDSSCQHRDPGLHLSFPNAADGGGAVVDGDKSYK 292

[Close]

BLAST of IVF0000932.1 vs. NCBI nr
Match: XP_038879417.1 (proline-rich receptor-like protein kinase PERK8 [Benincasa hispida])

HSP 1 Score: 384 bits (986), Expect = 8.07e-131
Identity = 211/311 (67.85%), Postives = 238/311 (76.53%), Query Frame = 0


Query: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTI--------TTPAPASPRR 60
           MANLPR GR RQR  AV PP+ AA QP  EP+ +I PFA T         TTPAPASP R
Sbjct: 1   MANLPRIGRTRQRPSAVAPPLLAAVQPTAEPKPEISPFAPTSIQTQPIEPTTPAPASPLR 60

Query: 61  ESPRPLSSPPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPP 120
           +SPR ++SPPKKATSPFASPKYGDS TR+D  PAAKAT SPPDS  +KY E RNGETTPP
Sbjct: 61  QSPRLITSPPKKATSPFASPKYGDSLTRVDSPPAAKATRSPPDSPTNKYLETRNGETTPP 120

Query: 121 LSPAKSRRAKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRS 180
           LSPAKSRR KTPPLSPL LPR  V + + TTA PR QP VETKGIVYNK VEKP+K++R 
Sbjct: 121 LSPAKSRRTKTPPLSPLTLPRTPVISWDETTALPRTQPVVETKGIVYNKAVEKPTKTDRP 180

Query: 181 SGEYGSSKSHQKKQKP-EVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHG 240
           S EYGS K HQK+Q   EVI L GHNVGAVMEINKSS GYRLGGET+K  ET+  G  HG
Sbjct: 181 S-EYGSGKPHQKQQATAEVINLNGHNVGAVMEINKSSDGYRLGGETVKNKETKGGGVHHG 240

Query: 241 YGHEDKKTETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIV 300
           +  ++K     K  PP+TAFMN+NFQS+NNS+L+DSSCNH DPGLHL+ P++VDGDGA V
Sbjct: 241 HKEKNKGA---KIVPPVTAFMNTNFQSINNSILYDSSCNHHDPGLHLSLPESVDGDGATV 300

Query: 301 DGQKSYKPKRQ 302
            G KSYKP RQ
Sbjct: 301 YGHKSYKPNRQ 307

[Close]

BLAST of IVF0000932.1 vs. NCBI nr
Match: XP_022974816.1 (wiskott-Aldrich syndrome protein family member 2-like [Cucurbita maxima] >XP_022975275.1 wiskott-Aldrich syndrome protein family member 2-like [Cucurbita maxima])

HSP 1 Score: 276 bits (707), Expect = 8.52e-89
Identity = 166/302 (54.97%), Postives = 197/302 (65.23%), Query Frame = 0


Query: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60
           M+N PRFGR RQR     PPV     PA E + + LPF  T  T  PA            
Sbjct: 1   MSNFPRFGRPRQRPSVAAPPVLPTTLPAAEHKPETLPFYRTSQTLQPAE----------- 60

Query: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120
              K TSP ASPKYG S T +   P AK  +SPP S   KY +R + +T+P  SP++S R
Sbjct: 61  ---KPTSPIASPKYGPSVTLVPSPPPAKDELSPPVSPAKKYPDRLS-QTSPLQSPSRSLR 120

Query: 121 AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSK 180
              PP  PLALP       +G T QPR+Q EVE K IVYNKTVEKP KS+R   EYGS K
Sbjct: 121 TSPPPPPPLALPPTHFTAKDGNTTQPRIQTEVEKKSIVYNKTVEKPVKSDRPL-EYGSGK 180

Query: 181 SHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKKT- 240
           SH+K++  E I L GHNVGAVMEI+K S  +RLGGET++KN+TE  GD    G+E+KK  
Sbjct: 181 SHEKQKTAESINLAGHNVGAVMEIDKLSASHRLGGETVRKNKTEG-GDGGRDGNEEKKKK 240

Query: 241 ---ETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKS 298
              + KKK+ P+TAFMNSNFQSVNNS+L+DSSCNHRDPGLHL F DA DGDGA VDG+K+
Sbjct: 241 EKKDKKKKKVPMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLKFADAADGDGAAVDGRKN 285

[Close]

BLAST of IVF0000932.1 vs. NCBI nr
Match: KAG6597059.1 (hypothetical protein SDJN03_10239, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 276 bits (705), Expect = 2.61e-88
Identity = 169/315 (53.65%), Postives = 201/315 (63.81%), Query Frame = 0


Query: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60
           M+N PRFG +RQR     PPV     PA E + +  PF            R +S +P   
Sbjct: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYK----------RSQSLQPAEK 60

Query: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120
           P    TSP ASPKYG S TR+   P  K  +SPP S   KY +R + +T+P  SP++S R
Sbjct: 61  P----TSPIASPKYGPSVTRVPSPPPPKDELSPPVSPAKKYPDRLS-QTSPLQSPSRSLR 120

Query: 121 AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSK 180
              PP  PLALP       N TT QPR+QPEVE K IVYNKTVE+P KS+R S EYGS K
Sbjct: 121 TSPPPPPPLALPPTHFTAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLS-EYGSGK 180

Query: 181 SHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKKTE 240
            H+K++  E I L GHNVGAVMEI+KSS G+RLGGET++KNETE  GDV   G+E+KK E
Sbjct: 181 PHEKQKAAESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEG-GDVGRDGNEEKKKE 240

Query: 241 TKKKEP-----------------PITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDA 298
            KKKE                  P+TAFMNSNFQSVNNS+L+DSSC+HRDPGLHL F DA
Sbjct: 241 EKKKEEKKKKEKKEKKETKEKKVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADA 298

[Close]

BLAST of IVF0000932.1 vs. TAIR 10
Match: AT2G46630.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 9.5e-10
Identity = 84/329 (25.53%), Postives = 123/329 (37.39%), Query Frame = 0


Query: 11  RQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSSPPKKATSPFA 70
           RQR P  P   P    P   PR Q  P         P SP +E   P  SPP +  SP  
Sbjct: 50  RQRQPRSP---PRQQDPPSPPRQQQQPLTPPRQKAPPTSPPQER-SPYHSPPSRHMSPPT 109

Query: 71  SPKYGDSRTRLDRS---------------PAAKATMSPPDSVRDKYFERRNGETTPPLSP 130
            PK         RS               P  K    P  +   +     + +T  P   
Sbjct: 110 PPKAATPPPPPPRSSYTSPPSPKEVQEALPPRKPNSPPSPAHSSRSTTSESVKTRSPSES 169

Query: 131 AKSRRAKTP-PLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSG 190
              R+A +P  LSP +LP + + +   TT +  +  E  ++    N   +  +     + 
Sbjct: 170 ENHRKAPSPRVLSPYSLPASLLHSERETTQKNILTAEKTSQTHETNHHNQNHNHDYNQNH 229

Query: 191 EYGSSKSHQKKQKPE-----------------------VIKLKGHNVGAVMEINKSSTGY 250
            Y  + S+ + Q  +                       VI + G N GAVMEI +S  G 
Sbjct: 230 NYNQNHSYNQNQNHQGNNPKKMHRQPSSSDSENIMSTRVITIAGENKGAVMEILRSPQGN 289

Query: 251 RLGGETLKKNETEDVGDVHGYGHEDK---------------KTETKKKEP-------PIT 279
           + GG     +        HG G + +               K +T K  P       P+ 
Sbjct: 290 KTGGSGTHSSRVS-----HGTGEKGRRLQSSSSSSSDEGEGKKKTTKNVPNKGNSNLPMK 349

The following BLAST results are available for this feature:

BLAST of IVF0000932.1 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0000932.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZ24	6.8e-165	100.00	Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00760 PE=...	[more]
A0A1S3AV38	6.8e-165	100.00	zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1	[more]
A0A0A0L320	2.0e-124	81.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119300 PE=4 SV=1	[more]
A0A6J1ICG8	1.8e-69	54.97	wiskott-Aldrich syndrome protein family member 2-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1GHE5	5.0e-67	54.97	sulfated surface glycoprotein 185-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of IVF0000932.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437851.1	1.40e-213	100.00	PREDICTED: zyxin-like [Cucumis melo] >KAA0048863.1 zyxin-like [Cucumis melo var....	[more]
XP_004133797.1	2.30e-160	81.13	uncharacterized protein LOC101205942 [Cucumis sativus] >KGN56395.1 hypothetical ...	[more]
XP_038879417.1	8.07e-131	67.85	proline-rich receptor-like protein kinase PERK8 [Benincasa hispida]	[more]
XP_022974816.1	8.52e-89	54.97	wiskott-Aldrich syndrome protein family member 2-like [Cucurbita maxima] >XP_022...	[more]
KAG6597059.1	2.61e-88	53.65	hypothetical protein SDJN03_10239, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of IVF0000932.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46630.1	9.5e-10	25.53	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXP...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..192
None	No IPR available	PANTHER	PTHR33472	OS01G0106600 PROTEIN	coord: 3..282
None	No IPR available	PANTHER	PTHR33472:SF1	EXTENSIN-RELATED	coord: 3..282

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0000932	IVF0000932	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0000932.1-five_prime_utr	IVF0000932.1-five_prime_utr-tig00195367:336719..336758	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0000932.1-exon	IVF0000932.1-exon-tig00195367:336719..337198	exon
IVF0000932.1-exon	IVF0000932.1-exon-tig00195367:337672..338222	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0000932.1-cds	IVF0000932.1-cds-tig00195367:336759..337198	CDS
IVF0000932.1-cds	IVF0000932.1-cds-tig00195367:337672..338140	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0000932.1-three_prime_utr	IVF0000932.1-three_prime_utr-tig00195367:338141..338222	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0000932.1	IVF0000932.1-protein	polypeptide