IVF0000682.1 (mRNA) Melon (IVF77) v1

Overview


Name	IVF0000682.1
Type	mRNA
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	S-protein homolog
Location	chr01: 4647459 .. 4647908 (-)
Sequence length	450
RNA-Seq Expression	IVF0000682.1
Synteny	IVF0000682.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGTAAAAAATATGAAGACCACCAGAGAGATGGTAGTTTTGTTGATGGTCGTGTTGATGTTTGTGGGGAGAATAGAGCAAATGGAGGGTGCCCCTTTAGAGAAATGGACAGTCCATGTGATGAATGACCTAACCAAGGCCCAAAAGTTGCTTGTTCACTGTAAATCCAAAGACAACGATTTAGGAGAACACAGCGTTAATGTTGGCTCGGAATACAATTGGTCTTTTAGAATTAACATCTTTGAAACCACTTTATTTTGGTGCGAATTAAGAAAGCCAAATGGACAACATGCATCTTTTGAAGCTTTTTGGGTAGAGAAAACATCCATTTGGCTCTATTATAGATGCTTGGAGTCTAAATGTTATTGGCATGCCAAAGATGATGGAATCTACCTTGCAAACAACCCTGATAAAACGCAACTTTTGATTCATAAGTGGGAAAATTAA

mRNA sequence

ATGGGAGTAAAAAATATGAAGACCACCAGAGAGATGGTAGTTTTGTTGATGGTCGTGTTGATGTTTGTGGGGAGAATAGAGCAAATGGAGGGTGCCCCTTTAGAGAAATGGACAGTCCATGTGATGAATGACCTAACCAAGGCCCAAAAGTTGCTTGTTCACTGTAAATCCAAAGACAACGATTTAGGAGAACACAGCGTTAATGTTGGCTCGGAATACAATTGGTCTTTTAGAATTAACATCTTTGAAACCACTTTATTTTGGTGCGAATTAAGAAAGCCAAATGGACAACATGCATCTTTTGAAGCTTTTTGGGTAGAGAAAACATCCATTTGGCTCTATTATAGATGCTTGGAGTCTAAATGTTATTGGCATGCCAAAGATGATGGAATCTACCTTGCAAACAACCCTGATAAAACGCAACTTTTGATTCATAAGTGGGAAAATTAA

Coding sequence (CDS)

ATGGGAGTAAAAAATATGAAGACCACCAGAGAGATGGTAGTTTTGTTGATGGTCGTGTTGATGTTTGTGGGGAGAATAGAGCAAATGGAGGGTGCCCCTTTAGAGAAATGGACAGTCCATGTGATGAATGACCTAACCAAGGCCCAAAAGTTGCTTGTTCACTGTAAATCCAAAGACAACGATTTAGGAGAACACAGCGTTAATGTTGGCTCGGAATACAATTGGTCTTTTAGAATTAACATCTTTGAAACCACTTTATTTTGGTGCGAATTAAGAAAGCCAAATGGACAACATGCATCTTTTGAAGCTTTTTGGGTAGAGAAAACATCCATTTGGCTCTATTATAGATGCTTGGAGTCTAAATGTTATTGGCATGCCAAAGATGATGGAATCTACCTTGCAAACAACCCTGATAAAACGCAACTTTTGATTCATAAGTGGGAAAATTAA

Protein sequence

MGVKNMKTTREMVVLLMVVLMFVGRIEQMEGAPLEKWTVHVMNDLTKAQKLLVHCKSKDNDLGEHSVNVGSEYNWSFRINIFETTLFWCELRKPNGQHASFEAFWVEKTSIWLYYRCLESKCYWHAKDDGIYLANNPDKTQLLIHKWEN

Homology

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BLAST of IVF0000682.1 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-21
Identity = 45/115 (39.13%), Postives = 68/115 (59.13%), Query Frame = 0


Query: 34  LEKWTVHVMNDLTKAQKLLVHCKSKDNDLGEHSVNVGSEYNWSFRINIFETTLFWCELRK 93
           + +W V V+N LT  + L +HCKSK++DLGE ++   + ++W+F  N+  +T FWC + K
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 94  PNGQHASFEAFWVEKTSIWLYYRCLESKCYWHAKDDGIYLANNPDKTQLLIHKWE 149
            NG H +   FW     + L++RC    C W AK DG+YL N+     +L  KWE
Sbjct: 98  DNG-HMNVNVFW---DDVILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

[Close]

BLAST of IVF0000682.1 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 9.8e-21
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 34  LEKWTVHVMNDLTKAQKLLVHCKSKDNDLGEHSVNVGSEYNWSFRINIFETTLFWCELRK 93
           + +W V V N LT  + L +HCKSK+NDLG+ ++     ++W+F  N+  +TLFWC + K
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 94  PNGQHASFEAFWVEKTSIWLYYRCLESKCYWHAKDDGIYLANNPDKTQLLIHKWEN 150
            +G H + + FW     + L++RC    C W AK+DG+YL N+     +L  KW++
Sbjct: 98  DDG-HMNVKVFW---DDVILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWKS 149

[Close]

BLAST of IVF0000682.1 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 9.8e-13
Identity = 49/152 (32.24%), Postives = 72/152 (47.37%), Query Frame = 0


Query: 4   KNMKTTREMVVLLMVVLMFVGRIE--QMEG------APLEKWTVHVMNDLTKAQKLLVHC 63
           KN+ +T   +  + +V++FV   E  Q +G       PL + TV   ND      L +HC
Sbjct: 8   KNLISTFSSMFTICIVMIFVTCYETFQQDGEPFPIRGPLTRITVKNNNDYL----LGIHC 67

Query: 64  KSKDNDLGEHSVNVGSEYNWSFRINIFETTLFWCELRKPNGQHASFEAFWVEKTSIWLYY 123
           KSKD+DLG H    G  Y W F +N   +TL++C   +       F+    E+     +Y
Sbjct: 68  KSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKGVFDIDRAERD----FY 127

Query: 124 RCLESKCYWHAKDDGIYLANNPDKTQLLIHKW 148
           RC    C W+AK D +Y  +N  +T     KW
Sbjct: 128 RC--RNCTWNAKKDSLYGYSNLPQTVTWFFKW 149

[Close]

BLAST of IVF0000682.1 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 39/115 (33.91%), Postives = 57/115 (49.57%), Query Frame = 0


Query: 33  PLEKWTVHVMNDLTKAQKLLVHCKSKDNDLGEHSVNVGSEYNWSFRINIFETTLFWCELR 92
           P  K TV + NDL     LL HCKSKD+DLG  ++  G  +++SF    F  TL++C   
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query: 93  KPNGQHASFEAFWVEKTSIWLYYRCLESKCYWHAKDDGIYLANNPDKTQLLIHKW 148
            PN  H SF+ +   + S     +C   +C W  + +G    N+  K   L + W
Sbjct: 104 WPNESH-SFDIYKDHRDS-GGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of IVF0000682.1 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 3.2e-11
Identity = 44/145 (30.34%), Postives = 70/145 (48.28%), Query Frame = 0


Query: 12  MVVLLMVVLMFV---------GRIEQMEGAPLEKWTVHVMNDLTKAQKLLVHCKSKDNDL 71
           M +++ +VL+ +         G++  M+G PL +  ++  ND      L VHCKS+D+D 
Sbjct: 1   MFIIIFIVLISLIGCETLQHDGKVFPMKG-PLTRVVIYNDNDYL----LGVHCKSRDDDH 60

Query: 72  GEHSVNVGSEYNWSFRINIFETTLFWCELRKPNGQHASFEAFWVEKTSIWLYYRCLESKC 131
           G H +  G  Y W F +N   +TL++C   +   +   F+ +   + S     RC    C
Sbjct: 61  GFHILQKGGLYGWMFYVNFMNSTLYFCGFSQEQVKKGVFDIYKAVRDS----SRC--RNC 120

Query: 132 YWHAKDDGIYLANNPDKTQLLIHKW 148
            W AK+DGIY      K   L +KW
Sbjct: 121 TWEAKEDGIYGYGEIPKKNPLFYKW 134

[Close]

BLAST of IVF0000682.1 vs. ExPASy TrEMBL
Match: A0A6J1CPR8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.8e-47
Identity = 82/133 (61.65%), Postives = 105/133 (78.95%), Query Frame = 0


Query: 18  VVLMFVGR---IEQMEGAPLEKWTVHVMNDLTKAQKLLVHCKSKDNDLGEHSVNVGSEYN 77
           +V +FV     +EQ+E  PL KW +HV N+L+  Q L VHCKSK++DLGEH+++VG+E+N
Sbjct: 10  LVFLFVSSLAIVEQIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGTEFN 69

Query: 78  WSFRINIFETTLFWCELRKPNGQHASFEAFWVEKTSIWLYYRCLESKCYWHAKDDGIYLA 137
           W FR+NI++TTL+WC L+KPNGQ  SF+AFWVEK SIWLYY+CLES C W AKDDGIYL 
Sbjct: 70  WRFRVNIWDTTLYWCYLQKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDGIYLR 129

Query: 138 NNPDKTQLLIHKW 148
           NNPD   + +HKW
Sbjct: 130 NNPDGRDVFVHKW 142

[Close]

BLAST of IVF0000682.1 vs. ExPASy TrEMBL
Match: A0A6J1CRU0 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 7.2e-43
Identity = 80/149 (53.69%), Postives = 113/149 (75.84%), Query Frame = 0


Query: 1   MGVKNMKTTREMVVLLMVVLMFVGRIEQMEG-APLEKWTVHVMNDLTKAQKLLVHCKSKD 60
           MGV++  T +  +V L+V+ + +  +E +E  + L+KW +HV+N L+  Q L VHCKSKD
Sbjct: 5   MGVRS--TKKHFLVFLLVLSLVI--LEPIEAFSELKKWQIHVVNGLSNGQTLFVHCKSKD 64

Query: 61  NDLGEHSVNVGSEYNWSFRINIFETTLFWCELRKPNGQHASFEAFWVEKTSIWLYYRCLE 120
           NDLGEH++N G+E+NW+FR+N++ TTLFWC L KP+G+ ASF+ FWVEK SIWL+YRC  
Sbjct: 65  NDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYH 124

Query: 121 SKCYWHAKDDGIYLANNPDKTQLLIHKWE 149
           S C W AKDDGIYL +NP +  +L+H+W+
Sbjct: 125 SNCIWTAKDDGIYLRDNPVQRDILVHEWK 149

[Close]

BLAST of IVF0000682.1 vs. ExPASy TrEMBL
Match: A0A6J1CQH6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013643 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.2e-39
Identity = 70/134 (52.24%), Postives = 101/134 (75.37%), Query Frame = 0


Query: 17  MVVLMFVGR--IEQMEGAPLEKWTVHVMNDLTKAQKLLVHCKSKDNDLGEHSVNVGSEYN 76
           +VVL+F+    +E      L++W +HV+N L   + L VHCKS+D+DLGE ++  G+E++
Sbjct: 11  LVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGRLLFVHCKSRDDDLGEQNLYDGAEFS 70

Query: 77  WSFRINIFETTLFWCELRKPNGQHASFEAFWVEKTSIWLYYRCLESKCYWHAKDDGIYLA 136
           W+FR+N+ +TTLFWC LRKP+ Q  SF+AFWVEKTSIWL+YRC ++ C W AKDDG+YL 
Sbjct: 71  WTFRVNVIDTTLFWCFLRKPDAQSVSFDAFWVEKTSIWLFYRCYDANCIWTAKDDGVYLR 130

Query: 137 NNPDKTQLLIHKWE 149
           +NP +  +L+HKW+
Sbjct: 131 DNPVQRDVLVHKWQ 144

[Close]

BLAST of IVF0000682.1 vs. ExPASy TrEMBL
Match: A0A1S4E390 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.4e-38
Identity = 70/146 (47.95%), Postives = 103/146 (70.55%), Query Frame = 0


Query: 6   MKTTREM----VVLLMVVLMFVGRIEQMEGAPLEKWTVHVMNDLTKAQKLLVHCKSKDND 65
           ++T R M    +V   + ++ +  ++  +   LE+W +H++N L+  Q L VHC+SKD+D
Sbjct: 26  LETMRSMKNHFLVFCFLFVLSLAIVKPTKAIGLERWHIHIVNGLSNDQNLFVHCQSKDDD 85

Query: 66  LGEHSVNVGSEYNWSFRINIFETTLFWCELRKPNGQHASFEAFWVEKTSIWLYYRCLESK 125
           LG+  ++VG+E+NW+F+IN ++TTLFWC L+KPN +  SFEAFWVE+ SIWL+YRC +S 
Sbjct: 86  LGKRYLSVGTEFNWTFKINFWDTTLFWCYLQKPNAESVSFEAFWVERKSIWLFYRCFKSN 145

Query: 126 CYWHAKDDGIYLANNPDKTQLLIHKW 148
           C W AKDDGIYL +NP     L+H W
Sbjct: 146 CIWTAKDDGIYLKDNPANRDALVHNW 171

[Close]

BLAST of IVF0000682.1 vs. ExPASy TrEMBL
Match: A0A6J1L0E8 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111497942 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 6.5e-36
Identity = 71/118 (60.17%), Postives = 87/118 (73.73%), Query Frame = 0


Query: 33  PLEKWTVHVMNDLTKAQKLLVHCKSKDNDLGEHS-VNVGSEYNWSFRINIFETTLFWCEL 92
           P++KW VHV+N L  A  L VHCKSKD+DLG H+ V +GSE+ WSF+ N++ TTLFWC L
Sbjct: 80  PIQKWRVHVVNRLNNA-TLFVHCKSKDDDLGFHNLVGIGSEFQWSFKNNLWATTLFWCLL 139

Query: 93  RKPNGQHASFEAFWVEKTSIWLYYRCLESKCYWHAKDDGIYLANNPDKTQLLIHKWEN 150
           RKPN  + SFEAFW+EKT IWL YRC    C W AKDDG+YL NNPD     +HKW++
Sbjct: 140 RKPNA-YVSFEAFWIEKTHIWLNYRCYGRNCIWTAKDDGVYLRNNPDGVDERVHKWKD 195

[Close]

BLAST of IVF0000682.1 vs. NCBI nr
Match: XP_022143780.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 196 bits (497), Expect = 1.97e-61
Identity = 79/122 (64.75%), Postives = 100/122 (81.97%), Query Frame = 0


Query: 26  IEQMEGAPLEKWTVHVMNDLTKAQKLLVHCKSKDNDLGEHSVNVGSEYNWSFRINIFETT 85
           +EQ+E  PL KW +HV N+L+  Q L VHCKSK++DLGEH+++VG+E+NW FR+NI++TT
Sbjct: 21  VEQIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGTEFNWRFRVNIWDTT 80

Query: 86  LFWCELRKPNGQHASFEAFWVEKTSIWLYYRCLESKCYWHAKDDGIYLANNPDKTQLLIH 145
           L+WC L+KPNGQ  SF+AFWVEK SIWLYY+CLES C W AKDDGIYL NNPD   + +H
Sbjct: 81  LYWCYLQKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDGIYLRNNPDGRDVFVH 140

Query: 146 KW 147
           KW
Sbjct: 141 KW 142

[Close]

BLAST of IVF0000682.1 vs. NCBI nr
Match: XP_038896594.1 (S-protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 181 bits (458), Expect = 1.76e-55
Identity = 77/140 (55.00%), Postives = 104/140 (74.29%), Query Frame = 0


Query: 9   TREMVVLLMVVLMFVGRIEQMEGAPLEKWTVHVMNDLTKAQKLLVHCKSKDNDLGEHSVN 68
           T++ VVL  V+ +    +++ + A L KW +HV+N L+  Q L VHCKSKDNDLGEH ++
Sbjct: 7   TKQCVVLFFVLCL--AMLDENKAAELAKWQIHVVNGLSNGQILFVHCKSKDNDLGEHKLS 66

Query: 69  VGSEYNWSFRINIFETTLFWCELRKPNGQHASFEAFWVEKTSIWLYYRCLESKCYWHAKD 128
           VG+E+NW FR+N + TTLFWC L+KPN QH+SF+AFW+E TS+WLY  C +S C W AKD
Sbjct: 67  VGNEFNWRFRVNFWNTTLFWCYLQKPNAQHSSFQAFWIESTSVWLYNMCYDSNCIWIAKD 126

Query: 129 DGIYLANNPDKTQLLIHKWE 148
           DG+YL +N +   +LIHKWE
Sbjct: 127 DGVYLKDNTNHEDVLIHKWE 144

[Close]

BLAST of IVF0000682.1 vs. NCBI nr
Match: XP_022143772.1 (S-protein homolog 74-like [Momordica charantia])

HSP 1 Score: 179 bits (455), Expect = 5.90e-55
Identity = 80/149 (53.69%), Postives = 113/149 (75.84%), Query Frame = 0


Query: 1   MGVKNMKTTREMVVLLMVVLMFVGRIEQMEG-APLEKWTVHVMNDLTKAQKLLVHCKSKD 60
           MGV++  T +  +V L+V+ + +  +E +E  + L+KW +HV+N L+  Q L VHCKSKD
Sbjct: 5   MGVRS--TKKHFLVFLLVLSLVI--LEPIEAFSELKKWQIHVVNGLSNGQTLFVHCKSKD 64

Query: 61  NDLGEHSVNVGSEYNWSFRINIFETTLFWCELRKPNGQHASFEAFWVEKTSIWLYYRCLE 120
           NDLGEH++N G+E+NW+FR+N++ TTLFWC L KP+G+ ASF+ FWVEK SIWL+YRC  
Sbjct: 65  NDLGEHNLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYH 124

Query: 121 SKCYWHAKDDGIYLANNPDKTQLLIHKWE 148
           S C W AKDDGIYL +NP +  +L+H+W+
Sbjct: 125 SNCIWTAKDDGIYLRDNPVQRDILVHEWK 149

[Close]

BLAST of IVF0000682.1 vs. NCBI nr
Match: XP_031745090.1 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 173 bits (439), Expect = 1.71e-52
Identity = 78/135 (57.78%), Postives = 98/135 (72.59%), Query Frame = 0


Query: 18  VVLMFV---GRIEQMEGAPLEKWTVHVMNDLTKAQKLLVHCKSKDNDLGEHSVNVGSEYN 77
           VVL+FV     +E+ +   LEKW +HV+N L+  Q LL HCKSKDNDLGE  +  G+E+N
Sbjct: 17  VVLLFVLCLAILEETKAVELEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFN 76

Query: 78  WSFRINIFETTLFWCELRKPNGQHASFEAFWVEKTSIWLYYRCLESKCYWHAKDDGIYLA 137
           W FR+N + TTLFWC L+KPNGQH+SFE+FW+E  S+WLY  C E  C W AKDDGIYL 
Sbjct: 77  WRFRVNFWNTTLFWCYLQKPNGQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLK 136

Query: 138 NNPDKTQ-LLIHKWE 148
           +N D  + +LIHKWE
Sbjct: 137 DNFDTHKDILIHKWE 151

[Close]

BLAST of IVF0000682.1 vs. NCBI nr
Match: KAE8646231.1 (hypothetical protein Csa_023825, partial [Cucumis sativus])

HSP 1 Score: 169 bits (428), Expect = 2.65e-51
Identity = 72/116 (62.07%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 34  LEKWTVHVMNDLTKAQKLLVHCKSKDNDLGEHSVNVGSEYNWSFRINIFETTLFWCELRK 93
           LEKW +HV+N L+  Q LL HCKSKDNDLGE  +  G+E+NW FR+N + TTLFWC L+K
Sbjct: 1   LEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIAGTEFNWRFRVNFWNTTLFWCYLQK 60

Query: 94  PNGQHASFEAFWVEKTSIWLYYRCLESKCYWHAKDDGIYLANNPDKTQ-LLIHKWE 148
           PNGQH+SFE+FW+E  S+WLY  C E  C W AKDDGIYL +N D  + +LIHKWE
Sbjct: 61  PNGQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDDGIYLKDNFDTHKDILIHKWE 116

[Close]

BLAST of IVF0000682.1 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 104.4 bits (259), Expect = 8.2e-23
Identity = 45/115 (39.13%), Postives = 68/115 (59.13%), Query Frame = 0


Query: 34  LEKWTVHVMNDLTKAQKLLVHCKSKDNDLGEHSVNVGSEYNWSFRINIFETTLFWCELRK 93
           + +W V V+N LT  + L +HCKSK++DLGE ++   + ++W+F  N+  +T FWC + K
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 94  PNGQHASFEAFWVEKTSIWLYYRCLESKCYWHAKDDGIYLANNPDKTQLLIHKWE 149
            NG H +   FW     + L++RC    C W AK DG+YL N+     +L  KWE
Sbjct: 98  DNG-HMNVNVFW---DDVILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

[Close]

BLAST of IVF0000682.1 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 101.3 bits (251), Expect = 6.9e-22
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 34  LEKWTVHVMNDLTKAQKLLVHCKSKDNDLGEHSVNVGSEYNWSFRINIFETTLFWCELRK 93
           + +W V V N LT  + L +HCKSK+NDLG+ ++     ++W+F  N+  +TLFWC + K
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 94  PNGQHASFEAFWVEKTSIWLYYRCLESKCYWHAKDDGIYLANNPDKTQLLIHKWEN 150
            +G H + + FW     + L++RC    C W AK+DG+YL N+     +L  KW++
Sbjct: 98  DDG-HMNVKVFW---DDVILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWKS 149

[Close]

BLAST of IVF0000682.1 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 75.5 bits (184), Expect = 4.1e-14
Identity = 37/103 (35.92%), Postives = 61/103 (59.22%), Query Frame = 0


Query: 39  VHVMNDLTKAQKLLVHCKSKDNDLGEHSVNVGSEYNWSFRINIFETTLFWCEL-RKPNGQ 98
           V + N L  ++ L VHC+SKD+DLGEH + +G +Y ++F  NI++TT F C++ + PN +
Sbjct: 29  VVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFK 88

Query: 99  H----ASFEAFWVEKTSIWLYYRCLESKCYWHAKDDGIYLANN 137
           H     ++E  W          + LE+ C W  ++DGIY + +
Sbjct: 89  HHLDFVAYETSW---------SKALEASCKWIGREDGIYFSQD 122

[Close]

BLAST of IVF0000682.1 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 74.7 bits (182), Expect = 7.0e-14
Identity = 49/152 (32.24%), Postives = 72/152 (47.37%), Query Frame = 0


Query: 4   KNMKTTREMVVLLMVVLMFVGRIE--QMEG------APLEKWTVHVMNDLTKAQKLLVHC 63
           KN+ +T   +  + +V++FV   E  Q +G       PL + TV   ND      L +HC
Sbjct: 8   KNLISTFSSMFTICIVMIFVTCYETFQQDGEPFPIRGPLTRITVKNNNDYL----LGIHC 67

Query: 64  KSKDNDLGEHSVNVGSEYNWSFRINIFETTLFWCELRKPNGQHASFEAFWVEKTSIWLYY 123
           KSKD+DLG H    G  Y W F +N   +TL++C   +       F+    E+     +Y
Sbjct: 68  KSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKGVFDIDRAERD----FY 127

Query: 124 RCLESKCYWHAKDDGIYLANNPDKTQLLIHKW 148
           RC    C W+AK D +Y  +N  +T     KW
Sbjct: 128 RC--RNCTWNAKKDSLYGYSNLPQTVTWFFKW 149

[Close]

BLAST of IVF0000682.1 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-12
Identity = 39/115 (33.91%), Postives = 57/115 (49.57%), Query Frame = 0


Query: 33  PLEKWTVHVMNDLTKAQKLLVHCKSKDNDLGEHSVNVGSEYNWSFRINIFETTLFWCELR 92
           P  K TV + NDL     LL HCKSKD+DLG  ++  G  +++SF    F  TL++C   
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query: 93  KPNGQHASFEAFWVEKTSIWLYYRCLESKCYWHAKDDGIYLANNPDKTQLLIHKW 148
            PN  H SF+ +   + S     +C   +C W  + +G    N+  K   L + W
Sbjct: 104 WPNESH-SFDIYKDHRDS-GGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

The following BLAST results are available for this feature:

BLAST of IVF0000682.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	1.2e-21	39.13	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	9.8e-21	37.93	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
Q9FI84	9.8e-13	32.24	S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1	[more]
F4JLQ5	1.4e-11	33.91	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
F2Q9V4	3.2e-11	30.34	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]

BLAST of IVF0000682.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPR8	2.8e-47	61.65	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1	[more]
A0A6J1CRU0	7.2e-43	53.69	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1	[more]
A0A6J1CQH6	2.2e-39	52.24	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013643 PE=3 SV=1	[more]
A0A1S4E390	2.4e-38	47.95	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1	[more]
A0A6J1L0E8	6.5e-36	60.17	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111497942 PE=3 SV=1	[more]

BLAST of IVF0000682.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143780.1	1.97e-61	64.75	S-protein homolog 1-like [Momordica charantia]	[more]
XP_038896594.1	1.76e-55	55.00	S-protein homolog 1-like [Benincasa hispida]	[more]
XP_022143772.1	5.90e-55	53.69	S-protein homolog 74-like [Momordica charantia]	[more]
XP_031745090.1	1.71e-52	57.78	S-protein homolog 1-like [Cucumis sativus]	[more]
KAE8646231.1	2.65e-51	62.07	hypothetical protein Csa_023825, partial [Cucumis sativus]	[more]

BLAST of IVF0000682.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	8.2e-23	39.13	S-protein homologue 1	[more]
AT4G29035.1	6.9e-22	37.93	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	4.1e-14	35.92	Plant self-incompatibility protein S1 family	[more]
AT5G06020.1	7.0e-14	32.24	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	1.0e-12	33.91	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 38..147 e-value: 7.0E-29 score: 100.4
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 29..139
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 29..139

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
IVF0000682	IVF0000682	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0000682.1-exon	IVF0000682.1-exon-chr01:4647459..4647908	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
IVF0000682.1-cds	IVF0000682.1-cds-chr01:4647459..4647908	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
IVF0000682.1	IVF0000682.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane