HG10022262.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGATTATACCAGAGAAATGATGGACTTGAAGACCCTTGTCACTCGGACTCTCGAGAAGAAGGGCGTCCTCGCTAAGATCCGTGTAATTTTTTTTTTTTACTTTTTCATCTCATTCTTGTATTTTATGCTGTTGTTTCCTTCAAATTTCTTCTATTCTGGCCTATACGGATCTTTCATTGTTATTCTTTGTACTGAATTTCTTGGATTTTTTGGGGTTCTTGTGTTGCTGGTTGGTGAGACTGAATGTGGTAGGTTAAGGCTAGGGTTTTGTTTCTACTTTTAGATTTAGAAGGACGTAGGACGGAGGAGACTGAATCTTTCTCTGTCTCTCTATTTTCTTTAGTGTTAAGCTGGTTGTAATTATAATGCAATTATTTGGATAAACTGAATCATCATCCCCTTGGATCTTGGACTGGTTGAGAAGCATCTACTTCTTGTGTTATGTTGTGTCTCCATTATTTATTCTTAAGATATCTTTGGCATCGATCTGATGTTAGGGGTCTTTAGTATTTACTACTTTTGAAGGAATATTTAATTATGTTCATAAAAAATCGTTCACCCTTCCTTCCTTTCTTTTTTCCCCTCACCTTTTCTTTTCTTTTTCTTTTGGTTATATGCCAGGCTGAACTTAGAGCTAGTGTATTCGAGGCAATTGAAGAAGAGGATCGTGTTATTGAGAAAGATGATGGATTGCCGCCTGCTTTACTTGGTAGTTGCAATGATCGAGCAAAGCAGCTTCATGCTTCACCATCAGGTTCGATTACAAAAATTTTTCTCCCCTCTTGAATATTATCAAATGAAAAATAATCTATGTTATCCACCTTGAAAAAGTGTGCCCTAAGAATTATTGGTATATGGAATTTTTGAAGTGCTTTCTGTTGCTTTATAAATAATTGAAGTTACAAAATTTAAGAAGAACAAATTTCCTGTGAAGGGTGGATTCGATTATTTTATATTTTTGATATACTTAGGTTCTATGTTTTAAGAAGCGACGGGCAATCAAAATCTCTTTGGACATCAAAATCTTTTTGTAATTACTATTTAGGTCTCATTGTACTTGATTGGAGCTCCTTTCTTTAGTTTGGGTCTGTTTTGGGGCTTGGTTTTTTTGGTTGCCATTGTATAACCTGTTTTTTTTTTTTTTTTTTTTTTTATTATTTATTATTTTTGTTCCTTAATGAAAGTTAGGTTCCTTAACAACTTATTATTATTATTATGTGCTGATTCAACTTAAGTAATCTATCCATCCACATTTTGGTATAATTGCAGGGAGGCTGCTTACTGCTCTAATATGCGAATATTTAGATTGGGCTCAGCTAAACCACACACTAAAAGTTTATCTCCCGGAGTGCAATATGGTAATCAAGCACATTATCCTTTATGTGTACAAAGTCCTCCAACACCCCACCCCTCTCAGAAAAAAAAGATAGAGAAGATGGGACCCACAACCCTAAACCCTTATATATAGCCTTATATCTTTATATATATGTTGTATGAAATCTAATGTCTGTTAATTCTGCAGCAAAAAGATTCTTGGAAATCTGAATTGAAGGAATTTAGTAGTAAAAACGGATATGATCTTAACAGAAATGGAGATAGTGGACCGTTGCTCTTGGATGTTCTTGAGGGATTCTTGAAGTTTGAGGTTGGTTGGATCTCATGATATATTTATGTTAAATTTGAATTGTTCATCGTGTATATTTCCTTACTATTATATCAGCAGTATCATTATTGTTATAGTTTTAATTTGTATGCTTGGTATGTTGGTCTTTTTGTTTTAGGTTGCCTTATTATCTATTTATATTATATAGCTTTTAGACTGCCATTTGACTTGTTTTCAGTTGAGAGATGTGAGGTTGCAACTTTTTTGGAAATCATTTATTCTCTTTGATAGAGTAACTTCTGCTATGATAAAAATGGTTGCATCTTTTAAAATGTGGGCTTACTAATCTAACTGTCTGTTTTTGTTTTAGTTCTTTGACGGTTTGTTATTGCCCTCGTCAATATAGCCACTAGCTTTATTAATTAACAGAATTTCTTATAACATACCCGTTAGGTTTTAGAGATGTTATCTTTCTGAAACACACGTCTGTTCAGTGTTCTACTGCAAACTACATTTCGTGTATATCTTCCCCTTGTACTGGGTATCACAAGTCAATAACTGTGGACGATAAAAATATGGAAAACCAATTAATGCGTTAGACAGATGTTTGTATTTTTTTTTTTCACTGGTACCTTAACTGTGGCCTTCAAAATTTATATTCATTCTCTTTATTTGTTTTCTGCTGGCAACCTTTTGATCTTTTTGTTCATTTCTTTAAAAAATCAGAATTTATCCCAAGCAAGGGGTCCTGGGAGGAGAATAACCACTTCAGAATCTGATTCAATGTCCAGTCACGAGTCTCGAAACAGTAGGAGACCTTCATCATCTGTTGCAGGGGGTTTACCTCCACTAGGAAGGTAGACACATGCCTGAACCAATAATATAGCTTTACTTTTCTTTTTGTCATCCTTAACTTTGTTGTATATTTGTTTCAGGCCCGGTGCTGGTTCGCAGGCATCTGGTAAGTTATGGAGCTACTTCTTATATGCTTATCTGCTTCCTCTTCTCCGTTCATGTGATGATTTAAACTTTCAGATAGGAGGGTAGGGTCTTCAATGTCTGGTTATCGAAAAGATGAATACAGTTGGAGATATGATGGCAATGAGCTTCCCGAAGAAGTAATGAGAACCTCAGCCGCATTGGAAAACCTGCAACTGGATCGAAAAGCTAGAAACCTAACCTCATCTTGGCGGTATGTTTTGATTGTGAAGAATTACCTTCTAGTGTGTGCGTATATGTGATTTCTTTTTCCCTTTCTGAAGAAAACTATGACTGTTTAATTGTGTGCGTATTTATGCTTTCTTTCTCTTTCTTCAGAAAATCCCTCATTTTTTTCCATACAAAAATATTTAAAATATCACTGGTTATTTGATTGAAACACCTCTTTCATTAAGATGGAGGAGTACAAAAACCCAAAGCCTGAGAAAAGAATGGCAAGGATATACTTAAATATGGTTATCCTCGTAAGAATTACTATACAACATCCACCAACTTACGTCCTTAGTTCAGTTCCGAGGTTCCAAACTCCATCTCCACAAAACGTTTATTTCTATTTACAACACCACCAACTAGGGTGAACACATGCTGGAAAAGCCATGAATGGCATCAAGGGTGTTAGTTAGAATTTGACATCCTTTAGGATTTTCCAGAGCTTGTAGATAATGTGGTGGGTGGGGGTTCACAACGCATAACCCTGAATGGTAGAAACAAACCTCGGAATTTGGGACCAAATTTGTAATTTTACCTAAAGGGACACGAAGTTAGCCAGTTCTCTTATTGGAGTTTTCTCCTTTGAAAAAGAAGTCTTCCTTCTGAGGAAGACAAAAGGACATTTAAGGAACACCTTGTTCCTTGGAAGTGACCAATACAAAAGGGCATTTAGCACTATTAATCTCCTCTTTAGAACAAAAGAAAATTATTTCATCTCTAAACAACGCATTAGAGTTGTGAAGTCGTGGAGCACATTGTGGAAGGAGTTAATAAAACATAAAATTGATGTATTTTAATCATGTGAGGCGCTCAAAGTCTTGGACTGAACAAAAAGTGGACTTAACTCCTCCATCTCTTAACTCCTTGGGCCAAACACCCACAGGAGTAAAAAATTTACTGCCTTTCTCGTTTTCTTTATTTCCATTCAATTAACTTCTCTACTTTCTGTCCTTGACTCAATTTAAAATAAAATTTATCTGTTTTACAATCAAAATTATTGTGGATGTGGTTGCAGACATGGGGGAGATGGTATCAATGACGATGATAGCAGAGGTGAACATATGTAA ATGGACGATTATACCAGAGAAATGATGGACTTGAAGACCCTTGTCACTCGGACTCTCGAGAAGAAGGGCGTCCTCGCTAAGATCCGTGCTGAACTTAGAGCTAGTGTATTCGAGGCAATTGAAGAAGAGGATCGTGTTATTGAGAAAGATGATGGATTGCCGCCTGCTTTACTTGGTAGTTGCAATGATCGAGCAAAGCAGCTTCATGCTTCACCATCAGGGAGGCTGCTTACTGCTCTAATATGCGAATATTTAGATTGGGCTCAGCTAAACCACACACTAAAAGTTTATCTCCCGGAGTGCAATATGCAAAAAGATTCTTGGAAATCTGAATTGAAGGAATTTAGTAGTAAAAACGGATATGATCTTAACAGAAATGGAGATAGTGGACCGTTGCTCTTGGATGTTCTTGAGGGATTCTTGAAGTTTGAGAATTTATCCCAAGCAAGGGGTCCTGGGAGGAGAATAACCACTTCAGAATCTGATTCAATGTCCAGTCACGAGTCTCGAAACAGTAGGAGACCTTCATCATCTGTTGCAGGGGGTTTACCTCCACTAGGAAGGCCCGGTGCTGGTTCGCAGGCATCTGATAGGAGGGTAGGGTCTTCAATGTCTGGTTATCGAAAAGATGAATACAGTTGGAGATATGATGGCAATGAGCTTCCCGAAGAAGTAATGAGAACCTCAGCCGCATTGGAAAACCTGCAACTGGATCGAAAAGCTAGAAACCTAACCTCATCTTGGCGACATGGGGGAGATGGTATCAATGACGATGATAGCAGAGGTGAACATATGTAA ATGGACGATTATACCAGAGAAATGATGGACTTGAAGACCCTTGTCACTCGGACTCTCGAGAAGAAGGGCGTCCTCGCTAAGATCCGTGCTGAACTTAGAGCTAGTGTATTCGAGGCAATTGAAGAAGAGGATCGTGTTATTGAGAAAGATGATGGATTGCCGCCTGCTTTACTTGGTAGTTGCAATGATCGAGCAAAGCAGCTTCATGCTTCACCATCAGGGAGGCTGCTTACTGCTCTAATATGCGAATATTTAGATTGGGCTCAGCTAAACCACACACTAAAAGTTTATCTCCCGGAGTGCAATATGCAAAAAGATTCTTGGAAATCTGAATTGAAGGAATTTAGTAGTAAAAACGGATATGATCTTAACAGAAATGGAGATAGTGGACCGTTGCTCTTGGATGTTCTTGAGGGATTCTTGAAGTTTGAGAATTTATCCCAAGCAAGGGGTCCTGGGAGGAGAATAACCACTTCAGAATCTGATTCAATGTCCAGTCACGAGTCTCGAAACAGTAGGAGACCTTCATCATCTGTTGCAGGGGGTTTACCTCCACTAGGAAGGCCCGGTGCTGGTTCGCAGGCATCTGATAGGAGGGTAGGGTCTTCAATGTCTGGTTATCGAAAAGATGAATACAGTTGGAGATATGATGGCAATGAGCTTCCCGAAGAAGTAATGAGAACCTCAGCCGCATTGGAAAACCTGCAACTGGATCGAAAAGCTAGAAACCTAACCTCATCTTGGCGACATGGGGGAGATGGTATCAATGACGATGATAGCAGAGGTGAACATATGTAA MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGSCNDRAKQLHASPSGRLLTALICEYLDWAQLNHTLKVYLPECNMQKDSWKSELKEFSSKNGYDLNRNGDSGPLLLDVLEGFLKFENLSQARGPGRRITTSESDSMSSHESRNSRRPSSSVAGGLPPLGRPGAGSQASDRRVGSSMSGYRKDEYSWRYDGNELPEEVMRTSAALENLQLDRKARNLTSSWRHGGDGINDDDSRGEHM Homology
BLAST of HG10022262.1 vs. NCBI nr
Match: XP_038889099.1 (protein TONNEAU 1a-like isoform X1 [Benincasa hispida]) HSP 1 Score: 520.0 bits (1338), Expect = 1.2e-143 Identity = 261/265 (98.49%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of HG10022262.1 vs. NCBI nr
Match: XP_008463549.1 (PREDICTED: protein TONNEAU 1a-like isoform X1 [Cucumis melo]) HSP 1 Score: 515.8 bits (1327), Expect = 2.3e-142 Identity = 259/265 (97.74%), Postives = 263/265 (99.25%), Query Frame = 0
BLAST of HG10022262.1 vs. NCBI nr
Match: TYK05747.1 (protein TONNEAU 1a-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 515.8 bits (1327), Expect = 2.3e-142 Identity = 259/265 (97.74%), Postives = 263/265 (99.25%), Query Frame = 0
BLAST of HG10022262.1 vs. NCBI nr
Match: XP_004149821.1 (protein TONNEAU 1a isoform X1 [Cucumis sativus] >KGN51247.1 hypothetical protein Csa_008384 [Cucumis sativus]) HSP 1 Score: 514.2 bits (1323), Expect = 6.6e-142 Identity = 258/265 (97.36%), Postives = 263/265 (99.25%), Query Frame = 0
BLAST of HG10022262.1 vs. NCBI nr
Match: XP_038889100.1 (protein TONNEAU 1b-like isoform X2 [Benincasa hispida]) HSP 1 Score: 506.5 bits (1303), Expect = 1.4e-139 Identity = 257/265 (96.98%), Postives = 261/265 (98.49%), Query Frame = 0
BLAST of HG10022262.1 vs. ExPASy Swiss-Prot
Match: Q9FQ25 (Protein TONNEAU 1a OS=Arabidopsis thaliana OX=3702 GN=TON1A PE=1 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 1.4e-99 Identity = 192/261 (73.56%), Postives = 217/261 (83.14%), Query Frame = 0
BLAST of HG10022262.1 vs. ExPASy Swiss-Prot
Match: Q9FQ24 (Protein TONNEAU 1b OS=Arabidopsis thaliana OX=3702 GN=TON1B PE=1 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 1.6e-95 Identity = 187/259 (72.20%), Postives = 213/259 (82.24%), Query Frame = 0
BLAST of HG10022262.1 vs. ExPASy Swiss-Prot
Match: Q66JX5 (Centrosomal protein 43 OS=Mus musculus OX=10090 GN=Cep43 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.1e-09 Identity = 45/132 (34.09%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of HG10022262.1 vs. ExPASy Swiss-Prot
Match: Q4V7C1 (Centrosomal protein 43 OS=Rattus norvegicus OX=10116 GN=Cep43 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.1e-09 Identity = 45/132 (34.09%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of HG10022262.1 vs. ExPASy Swiss-Prot
Match: O95684 (Centrosomal protein 43 OS=Homo sapiens OX=9606 GN=CEP43 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 9.9e-08 Identity = 60/203 (29.56%), Postives = 101/203 (49.75%), Query Frame = 0
BLAST of HG10022262.1 vs. ExPASy TrEMBL
Match: A0A5D3C1P8 (Protein TONNEAU 1a-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002350 PE=4 SV=1) HSP 1 Score: 515.8 bits (1327), Expect = 1.1e-142 Identity = 259/265 (97.74%), Postives = 263/265 (99.25%), Query Frame = 0
BLAST of HG10022262.1 vs. ExPASy TrEMBL
Match: A0A1S3CJH5 (protein TONNEAU 1a-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501672 PE=4 SV=1) HSP 1 Score: 515.8 bits (1327), Expect = 1.1e-142 Identity = 259/265 (97.74%), Postives = 263/265 (99.25%), Query Frame = 0
BLAST of HG10022262.1 vs. ExPASy TrEMBL
Match: A0A0A0KS40 (LisH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G503600 PE=4 SV=1) HSP 1 Score: 514.2 bits (1323), Expect = 3.2e-142 Identity = 258/265 (97.36%), Postives = 263/265 (99.25%), Query Frame = 0
BLAST of HG10022262.1 vs. ExPASy TrEMBL
Match: A0A1S3CL40 (protein TONNEAU 1b-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501672 PE=4 SV=1) HSP 1 Score: 502.3 bits (1292), Expect = 1.2e-138 Identity = 255/265 (96.23%), Postives = 259/265 (97.74%), Query Frame = 0
BLAST of HG10022262.1 vs. ExPASy TrEMBL
Match: A0A6J1JMY8 (protein TONNEAU 1a-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487297 PE=4 SV=1) HSP 1 Score: 500.4 bits (1287), Expect = 4.7e-138 Identity = 250/265 (94.34%), Postives = 260/265 (98.11%), Query Frame = 0
BLAST of HG10022262.1 vs. TAIR 10
Match: AT3G55000.1 (tonneau family protein ) HSP 1 Score: 364.0 bits (933), Expect = 1.0e-100 Identity = 192/261 (73.56%), Postives = 217/261 (83.14%), Query Frame = 0
BLAST of HG10022262.1 vs. TAIR 10
Match: AT3G55005.1 (tonneau 1b (TON1b) ) HSP 1 Score: 350.5 bits (898), Expect = 1.2e-96 Identity = 187/259 (72.20%), Postives = 213/259 (82.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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