HG10021756.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021756.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein LURP-one-related 7
Location	Chr05: 16038252 .. 16045300 (+)
Sequence length	558
RNA-Seq Expression	HG10021756.1
Synteny	HG10021756.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCCCAGTTGGGTATGAATGATAGTGGACCGGGTGACACGGGACTGGGACAAACGCTAATCTAGACATTTATGTGAAGAAATTTGTCAATTTTTGTTGTTTTGAAACGATAAAGCCCGACTGGGTATGAATGATAGTGGACTAGGTGCGCATCGGCAAGGGATGACTCTGGCCTGATTAGTAAGGGGTCTAAGGTGGGAAAATAGCTCAAGTGGGGCTGATCGGGTAAAATATCATACAGGGTATAGGGTGACCCAGGACCAAGTTAAACGCTAATATGGATATTTTCATGAAGCAATTTGTCAATTTTTGTTGTTTTGAAATGATGAAGCTTGGCCGGGTATGAATGACAGTGGACTGGGTGTGCACTGGGCATCACTGACTCTGACTGGGTTAAAAAGGGGCCTAGGGTAGGAAAATAGCCCGAGCAGGGCTAATCGGGTAAAATACTGTAGGAGGTGACTCGAAACCGGGGCAAACGATTCTAGATTTTGCCCCAGTTCTGTACTCAGTCAGGCTAGACTATCTTTGGAGAAGAAGACTTCGACAGTTGATGACAACACTAGATGAAAATCACAAAACAAAAAATATCTTCCGACAATTAGAAAGAAAAATGGAAAAAGGAAGTTGTAGAGAGGAAGGATTTCGAAGAAGACGAAGTAGAAAGGAATAGAAGAAAGAGAGATTAAACTGTGGAAGACGAAAATTTTCATATCTACAATATTTAATGCACATAAATTTAAAAATATTAAAATATAATTAAAATTACATTTTTTTTAGGAGATAATTAAAACTACTTTAAAGCAATCCCTTTTTCTCTCATGTATACATGTGTGTAAATGTGACTTTTCAACTTTTTTCTCTCTCTCATGCATGCCATTATTCCATGTGTAGCTCATGCAATTAGTCTGTTCTTTATGTAAAGTTGAGAGATTTTGAGCTTGAAGGTAGTCCGTATACATGGACTAACAGATGGGTGAAGGGTGCAATGATTTTTACACATTTTTTGGATCGATTCCTTGGTAATGACGAATTTCATGGTTTGTTTTTGAATAACTGAGTTCATCATCTTAAGTGGTATAGTTCTGATCATAGTCCCATTTTCCTTAATGTTGATCCAAATCCTAGTAGAATTTAGAGAGGTGGTTGGTTGCGACTGTTTCGGTTTAAGGAAGCTTGGATGTTTGACGAGGATTGTGATAAAATTATTCATGATAGTTGGCATGCTAGAGAGGGGAATGGGGTGGAAGGTGGAGAACATGTTTCAAAGTTGGCCTATTTCATTCTATTTTGTGAGCAGAAGCTTAAGACTTGGTCTTTAACTAGGCCAAGAAATTTCTTTAAGCAAGTCACTTGTCTTCGAGATCAAATCCAAAGACTGATGGATGATAGGGAGGGTACAAATTTGATTTAATCGCTTGAGTGAAAACTTGATGATGTGCTTGATTGGGAAGAGGTATATTAGCATCAAAGATCGAATGAGTGTTGGTTGAAGTGGAGAGATAAAAACACAAAGTGGTTTCATCAGAAAGCGTCGAGTCGTAAAAAGAAAAATTATATTAAGGGTATCAGAGATTTTGATGGGAGATGGATTTCGTCCGAACTCGTGGTGGAAAGAGTGTTTATTAAGTATTTTTCGAGTACATTTTCTTCGGGAAATCCCTCTGTTAAGCATATGGATGTGGCTTTGGTCGCTATACAAAGGAGGGTGTCTGAAGAGATGAATGCTTTACTTATGAGAGAGTATACTGCGGAGGAAATCAAAGTTGCTCTTTTTTAGGTGTGGCCTTCCAAAGCCTCTGGACCATATGGTTTTCCTGTTGCGTTTTATCAGGGTTATTGGGATATTCTCAAGGATAGAGTTGTGGCAGCTTGCTTGGAGGTTCTTAATCAAAATAGATCTGTCAGGTGCTTTAACCCGTCCACTATTGTTTTAATTCCAAAGAAGAAAAATCCTTCTGAGGCTTCGAATTATCGCCCTATCAGTTTGTGTAATGTCGTTTATAAAATCATAGTCAAGGTTATTGCTAAAAGATTAAAGATAACTTTGCCCCTGATTATCTCTGAAGCCTAGAATGCTTTTGTGCCAAGTAGGCTTATTTCTGATATCCTTATTAGCCAGGAGTGTTTATATCATATTTTTTTCAAAAAGGAAGGGTACTAGTGGATTGAGAGCTATAAAACTTGACATGAGTAAAGCTTACGACATGATTGAATGGGAGTTTCTGAAGCGGCTGATGTTGAAGATGGGGTTCCAAAGTGAATGGGTGAATCTTATTCTGGATTGTCTTACCACTATCAACTTTACTGTATCCATAAACGATAAGTGTTTAGATGTCTTCTCTCCTATGCGGGGTATTAGGCAAGGAGACCCCATCTCTCCTTATTTATTTATATTATGTGTTGAATGTTTTTCTTCTTTGATTGCGGCGGAGTGTCTGGTTGGAGATTTTTTTGGCTGTTAGAATTGCTTGAGCGAGCCCAATTATTTCCCACTTGTTTGTCGCGGATGATAGCCTTCTTTTCTGTAAGGCTACCTCTGATGCTTGTAGCAAAGTTATTGAGATTCTTTAGATTTATGAACGTGTGTTGGGTTAATGTGTTAATTTTTCTAAATCTGCTATTCTCTTTAGCCCTAATGTTTCGAATGATGTGAGGAGGGTTCTTTACAATATTTTGAAGATTCAAGGGGTGAATGATTTGTGCAAGTATCTGGGGCTTCCTTCTCATTTTTCCAGGAAAAAGAGTTTTGAGCTTAGATTTCTTAAAGAGAAGGTTCTGAAGGTGATTGCAAGTTGGAAAGGTAATATGTTTTCTGTTGGGGATAAAGAGTTGCTTCTCAAAGCTATCGCCCAAGCTCTTCCTACATATGCTATGTCTTGCATCAAATTGCCTAAAGGTATTTGTGATGATTTATCCAAAGCGATGGCTCGTTTTTGGTGGGGTTCGTCGTTGAGTACCAAGAAGATGCATTGATTAAATTGGAAGGCCATATGCGCTCCAAAAGAGGTTAGTGGGATGAGATTTAAGGATTTTGAGGATTTCAACCATGCTTTGTTAGCTAAACAAGCTTGGAGAATCCTTATTCAACCTGACTCTCTTGTTGCTAAGGTTTTCAAAGGGAGATATTTTCATTCTTTTGATTTCCTTTCTTCGGAGGAGAGCTCCAATCATTCTTATGTCTAGATGAGTGTTTTGTGGGGGCTAAGTTTATTGATGAAGGGAATTAGAAGATGCATTGGGACTGGTGAAGATACTCTTGCTTTCTCTCACCTCTGGATTCCAAGGGAAAGATCCTTTAAACCAATTACCCGTTGTCTGCCTAATGTTGTTAATTTGAGAGTGTGTGATCTGATGACTGATAATGGTAAGTGGGATGTTGATAAGATGAGTTAAGTGTTTTGGCAAGAGGACATTGAGAAAATCCTGACTATTCCTATATGTAGAACTATGATTCCAAACACCTAGCTTTGGCGCTATAATAAGAATGAGATTTTTACAACTAAAAGTGCTTACAAAATCCTAGGGTTGGAGAATTTGGAGGGATCTTCATCCTCTACGGGGAGGTAAAAAATCTAGTGGAATAAGGTTTGGGGTTCAATTCTTCCTAATAAGATTAAAAATTTTATGTGTCCCCCTACTAGACAATATGGGAGAACTAAAAGTGCTTACAAAATCCTAGGGTTGGAGAATTTGGAGGGATCTTCATCCTCTACGGGGAGGTAAAAAATCTAGTGGAATAAGGTTTGGGGTTCAATTCTTCCTAATAAGATTAAAAATTTTATGTGTCCCCCTACTAGACAATATGGGAGGATTGGAATCGAGTGAAATTCCATGGCCAGGTTGCTCTGGTTTCGCTGAAGGTCAAGTGGTTATTAGGATTTGTTGAAGATGTTAGATCCAAATGGGGCTATTATCTCTATCGTTTGGACGCTAGTCGCCTGGGTTTGTCAAATTCGAGTTTGGCTATTGAGCAGAGGAGTGCACGGGTTGTTGGGGTGCCCTGTCAGTGGGTTTCTTCTGAGAGTGGGTGTCTAAAACTTAATGTTGATGTCGCTTCCCATCTGGAGAAATTGGGGGTTGGTTTGAGGGTTGTGGATCGAGACTATAGCAGGAGAGTGTTGGTGGCTCAGGCTTTGTTCCAAACAGGAGTTTGATGATGGAGGCGAGGGAGGTTCTTGCTTTCCTTTTGGGTTTGAAGTTGATCGAGGAGTTGGGTTGTAGGGCTATGTTCGTGGAGGCTGATGTGAGTGAGGTGGTTCATAAGTTGTAGTCAATGGCTTTTAGTTTATCTCCCAATGGAGGACTTTTTCTAAAATTAATATTATTTTCATAAATAATGACAAATTTAGGGTTAGGTTGAAAATATTGACAAAAATAGGGTAGCGAAATCATGGACCCCGTCCACGATTTTCACCTATGCTAAAAAAAAATTGGATCGGGTCCACGATTTCTACGTGGGTTAGCTTTGCAGGTGTGGCAGGGTTGACCAAGACATGTGAGCAAAATTGTGGACCCAGTCCACGATTTTGCATGCCATGTGGGCTAATTTTATGAAATCATGGACCCTTCGCTATTTTTTAAAATACTTTCAGCCCTATTTTTGTCATTATTTATTAAAATAACATTATTTATTAAAAAAATTCCCTAATGGAGTTATTTATGCTAAAGTTTTTAATTTATTATGCTATGCTAGTATTTTGGGTCTTAGTTATGCAAATAGATCTTGTAATAGGGTGGTCCATGCCACTTTTACCTTTCAAAGCTCATCTTCCAATTTGTGGTCTAAGAACTTTTCGTTGTGGCTAGCCCATATCGTGGATGATGATTGGTCTGTTAGGGTCGATGACAATTATTCTTAATGTCATTTTTGTTGCTCTTTAAAAAAAATTAGTCTTTTAATTTTCCTTTTATATTTTTTTATTAATTTTTTTCAAAATTCTTTTAAGGAATAGATTAGATTTATGTATTTTATTTTAATATTTTCTGTTTTCAAAATCTTGTAATTTAGGAATAGATTATATTCACATTTTTTATTTTAATATTTTCTGCTTTTATTTGAATTTTGTGTTTAATTAGCAAATACCAAAAAGGAAAAATCTTCTTATAATATAAGATTTAGAATTTAGATTAGAATTACTATTTAAATTAAATTTTAAATCTTTAATTATTTTGATTGTGAATAGTGAATATTTAATTTTAAAAATAGTTTCAATTACATATGAAAAATATGACATGAATTATGAAAAATTAGAATTTAAAAAATTGAAAAATGGATATTGAAATTAAAACATTTAATTGGTGGTTGATATTAGGTAAGAGGTTGGTTGAATTTAATAAGGTGGAAAGGGTATATAAGTAATTAATCATGTTAGGTTTGCTTTGCTTACCTCACTTTTATCATCAAGGGTCTAAAAAAATAAATTTTTTAAAAAGTTTACAATTTTTCAAATAAAGTTGGAGGGGTCAAAAAAAAAAAAAATCAATTACCCATGAGGGACATTTTTTTATTTATAATTTAGCCTTTATTTTATTATCATCGAGTTGTGTTTTAGCTTTTCAACAAATACCACAAAAGTTCATTTCTTCCTTCAAGTTCAAGCCTGCCAAAGAATTAAGAAAAGTAAACTATAATCCGAAATTCTTTAATCTTTGTCCTCTCCTCTCTACCTTCTTCCATTTTTCCTTTCCTTTTCTTTCATTGTGTTGCAAATCTTATTGTTTATGGCTAATTCTTCCGATCCTGCAATCTGCTCTATAGCTTTCCCAATCTCCGTTGATCTCTTCCTATTCAGAAAACATCCCGACTACGTAACTAATTCCTTCGGTGACATCGTTTATAGGCTCAGTCGTCGATCTTTGAAATCGTTGTCAGTTGACAAGATTGTACTACTTGACGCTGCTGTCAGCCCTCTCATTTCCATTTATCGCGTTAACGTAAGTATTCACCCTACTTTTGTTCATCGTCTCCTGTGTTAGTTTCAAGATTCAGTGTAATAGCTTTGTTTAGTATCCTGTTGTGAACTAGTTTTTTTCTTTCCTCTTCATGTTTGCTTGCAAGTTCCTAATCATGTGAAGAGCAAGTTCGTTGCCTCCAATTTTCAGAAGCTGAGTGTTTTTGATTAATTTTGTTGCGATCGTATGATCAAAAAGTTAGGAAAGGTAGATTCAACATGTTAGAATAACCCACATTTTTCTTTTCTACTTCGCCTTCAGGAATTAGATCCATTACTTTAATACGAAATAATTAGAGAATTCCAGCTCGTATCCACCAAAGAATTAGCAAAGTTTTCCTCCTTCTGTATGGGGAAGGAGAGTTTTAATATTGTATGACCTAAATGATTTTGGTGTTTCCTATTTCTAGCTTGCAAAATGATCTAGAATTTTAGTATCGACCATTTTTTCACAGTTTTTGTCTGTTATGTGCCTTCTAGTTGTTTGTGATTTTAGAATTGTGATTGTTGGGATTTGTTAAAATTCCTTCACATTGGTCACTACATTCCAAATGAACCATCCCTATAAACTTTTATGGAATCTAGAACAAACGAATATGTAACTATTACTCCTGAAATAGTTGAACATTAGCTTATGCTTTATGAGATGTACTTTTCAGAAATATCAAGTAATTCTTGTGCTAGACTTCTTGTTTGTTTTTTTTTCTGAAATAATTTGAACAGGTTTGCATTGGTTTCAGAAAGAATCTTGCAAGGCTTTAAGGGGGATGTTGGTGAGGAGGATTTGCTCTTCAAAGTGCAAAGAACACTCAACAAACTTAGAAGAACTGAGTTCAAAGTCTTCCTTTTCAGTGAAAATGATGACTCAAATGCTAACTTGGAGATGAAAGGCTGGCCCAGGTACAGACCTACAGTATAAAAATAACCGATGGAATTAAGAATGTTTTTATGAGGCTGTTCATTTCATCCCTAAGCATGTTGTTTGTTGAGTGAAATATGAAGATGACAATTCTAACTCTAATGCTTGCTATAGTTGTTACTTTTAACAGCCAAAGTGTTATAATTGTAAAGAGTAGAAGGCCTAGCTCATAA

mRNA sequence

ATGAAGCCCAGTTGGGGTTATTGGGATATTCTCAAGGATAGAGTTGTGGCAGCTTGCTTGGAGGTTCTTAATCAAAATAGATCTGTCAGCCCTAATGTTTCGAATGATGTGAGGAGGGTTCTTTACAATATTTTGAAGATTCAAGGGGTGAATGATTTGTGCAAGTATCTGGGGCTTCCTTCTCATTTTTCCAGGAAAAAGAGTTTTGAGCTTAGATTTCTTAAAGAGAAGGTTCTGAAGGTGATTGCAAGTTGGAAAGGTAATATGTTTTCTGTTGGGGATAAAGAGTTGCTTCTCAAAGCTATCGCCCAAGCTCTTCCTACATATGCTATGTCTTGCATCAAATTGCCTAAAGAAAGAATCTTGCAAGGCTTTAAGGGGGATGTTGGTGAGGAGGATTTGCTCTTCAAAGTGCAAAGAACACTCAACAAACTTAGAAGAACTGAGTTCAAAGTCTTCCTTTTCAGTGAAAATGATGACTCAAATGCTAACTTGGAGATGAAAGGCTGGCCCAGCCAAAGTGTTATAATTGTAAAGAGTAGAAGGCCTAGCTCATAA

Coding sequence (CDS)

ATGAAGCCCAGTTGGGGTTATTGGGATATTCTCAAGGATAGAGTTGTGGCAGCTTGCTTGGAGGTTCTTAATCAAAATAGATCTGTCAGCCCTAATGTTTCGAATGATGTGAGGAGGGTTCTTTACAATATTTTGAAGATTCAAGGGGTGAATGATTTGTGCAAGTATCTGGGGCTTCCTTCTCATTTTTCCAGGAAAAAGAGTTTTGAGCTTAGATTTCTTAAAGAGAAGGTTCTGAAGGTGATTGCAAGTTGGAAAGGTAATATGTTTTCTGTTGGGGATAAAGAGTTGCTTCTCAAAGCTATCGCCCAAGCTCTTCCTACATATGCTATGTCTTGCATCAAATTGCCTAAAGAAAGAATCTTGCAAGGCTTTAAGGGGGATGTTGGTGAGGAGGATTTGCTCTTCAAAGTGCAAAGAACACTCAACAAACTTAGAAGAACTGAGTTCAAAGTCTTCCTTTTCAGTGAAAATGATGACTCAAATGCTAACTTGGAGATGAAAGGCTGGCCCAGCCAAAGTGTTATAATTGTAAAGAGTAGAAGGCCTAGCTCATAA

Protein sequence

MKPSWGYWDILKDRVVAACLEVLNQNRSVSPNVSNDVRRVLYNILKIQGVNDLCKYLGLPSHFSRKKSFELRFLKEKVLKVIASWKGNMFSVGDKELLLKAIAQALPTYAMSCIKLPKERILQGFKGDVGEEDLLFKVQRTLNKLRRTEFKVFLFSENDDSNANLEMKGWPSQSVIIVKSRRPSS

Homology

[Close]

BLAST of HG10021756.1 vs. NCBI nr
Match: XP_038884438.1 (protein LURP-one-related 7 [Benincasa hispida])

HSP 1 Score: 92.8 bits (229), Expect = 3.3e-15
Identity = 56/81 (69.14%), Postives = 63/81 (77.78%), Query Frame = 0


Query: 94  DKELLLKAIAQALPTYAMSCIKLPKERILQGFKGDVGEEDLLFKVQRTLNKLRRTEFKVF 153
           DK +LL A A A P   +S  ++ KE   QGFKGDVGEEDLLFKVQRTLNKL+RTEFKVF
Sbjct: 52  DKIVLLDA-AAADP--LISIFRVNKES-WQGFKGDVGEEDLLFKVQRTLNKLKRTEFKVF 111

Query: 154 LFSEN-DDSNANLEMKGWPSQ 174
           L  E+ DDSNA+LEMKGWP Q
Sbjct: 112 LVGESLDDSNASLEMKGWPFQ 128

[Close]

BLAST of HG10021756.1 vs. NCBI nr
Match: XP_023523465.1 (protein LURP-one-related 7 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-14
Identity = 52/81 (64.20%), Postives = 61/81 (75.31%), Query Frame = 0


Query: 94  DKELLLKAIAQALPTYAMSCIKLPKERILQGFKGDVGEEDLLFKVQRTLNKLRRTEFKVF 153
           DK +L  A A A     +S  ++ KE   QGFKGD+GE+DLLFKV+RTLNKLRRTEFKVF
Sbjct: 52  DKIVLHDAAAAAAAGPLISIHRVNKES-WQGFKGDIGEQDLLFKVERTLNKLRRTEFKVF 111

Query: 154 LFSEN-DDSNANLEMKGWPSQ 174
           L  EN DDSNA+LEMKG+P Q
Sbjct: 112 LVGENSDDSNASLEMKGFPFQ 131

[Close]

BLAST of HG10021756.1 vs. NCBI nr
Match: XP_023523464.1 (protein LURP-one-related 7 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-14
Identity = 50/81 (61.73%), Postives = 58/81 (71.60%), Query Frame = 0


Query: 94  DKELLLKAIAQALPTYAMSCIKLPKERILQGFKGDVGEEDLLFKVQRTLNKLRRTEFKVF 153
           DK +L  A A A     +  I    +   QGFKGD+GE+DLLFKV+RTLNKLRRTEFKVF
Sbjct: 52  DKIVLHDAAAAAAAAGPLISIHRVNKESWQGFKGDIGEQDLLFKVERTLNKLRRTEFKVF 111

Query: 154 LFSEN-DDSNANLEMKGWPSQ 174
           L  EN DDSNA+LEMKG+P Q
Sbjct: 112 LVGENSDDSNASLEMKGFPFQ 132

[Close]

BLAST of HG10021756.1 vs. NCBI nr
Match: XP_030967653.1 (uncharacterized protein LOC115988147 [Quercus lobata])

HSP 1 Score: 89.7 bits (221), Expect = 2.8e-14
Identity = 57/152 (37.50%), Postives = 88/152 (57.89%), Query Frame = 0


Query: 9   DILKDRVVAACLEVLNQNRS---VSPNVSNDVRRVLYNILKIQGVNDLCKYLGLPSHFSR 68
           DIL  R  AA  + +N ++S    SPN   + +  + NIL     +   KYLGLPS   +
Sbjct: 540 DIL-SRYEAASGQKINTDKSSVFFSPNTPQERKECILNILGPMQDSRHYKYLGLPSIIGK 599

Query: 69  KKSFELRFLKEKVLKVIASWKGNMFSVGDKELLLKAIAQALPTYAMSCIKLPK------E 128
            K+     +KE+V K +A WKG + S+G +E+L+KA+AQA+PTY MSC +LPK      E
Sbjct: 600 SKALVFAEVKERVAKKLAGWKGKLLSIGGREILIKAVAQAVPTYTMSCFQLPKTLCKDLE 659

Query: 129 RILQGF-KGDVGEEDLLFKVQRTLNKLRRTEF 151
            +++ F  G  G+E+ +  V  T  K+ +++F
Sbjct: 660 NLMRNFWWGQRGDENKISWV--TWKKMCKSKF 688

[Close]

BLAST of HG10021756.1 vs. NCBI nr
Match: XP_022948358.1 (protein LURP-one-related 7 [Cucurbita moschata])

HSP 1 Score: 89.7 bits (221), Expect = 2.8e-14
Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 94  DKELLLKAIAQALPTYAMSCIKLPKERILQGFKGDVGEEDLLFKVQRTLNKLRRTEFKVF 153
           DK +L  A A A P   +S  ++ KE   QGFKGD+GE+DLLFKV+RTLNKLRRTEFKVF
Sbjct: 52  DKIVLHDAAAAAGP--LISIHRVNKES-WQGFKGDIGEQDLLFKVERTLNKLRRTEFKVF 111

Query: 154 LFSEN-DDSNANLEMKGWPSQ 174
           L  EN DDSNA+LEMKG+P Q
Sbjct: 112 LVGENSDDSNASLEMKGFPFQ 129

[Close]

BLAST of HG10021756.1 vs. ExPASy TrEMBL
Match: A0A803Q1K6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.3e-14
Identity = 51/114 (44.74%), Postives = 70/114 (61.40%), Query Frame = 0


Query: 11   LKDRVVAACLEVLNQNRS---VSPNVSNDVRRVLYNILKIQGVNDLCKYLGLPSHFSRKK 70
            L  +  AA  +++N ++S      NV+ +VR +L  IL ++ V +  KYLGLPS   R K
Sbjct: 1004 LLSKYTAASGQLVNYHKSEACFGRNVTAEVRSLLAGILGVREVENHGKYLGLPSFVGRNK 1063

Query: 71   SFELRFLKEKVLKVIASWKGNMFSVGDKELLLKAIAQALPTYAMSCIKLPKERI 122
               L  +K KV   +  WK +MFSV  KE+L+KAI QA+PTY MSC KLPK+ I
Sbjct: 1064 REFLDEIKNKVWAKMKGWKTSMFSVAGKEVLIKAIVQAIPTYTMSCFKLPKKTI 1117

[Close]

BLAST of HG10021756.1 vs. ExPASy TrEMBL
Match: A0A6J1G943 (protein LURP-one-related 7 OS=Cucurbita moschata OX=3662 GN=LOC111452060 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.3e-14
Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 94  DKELLLKAIAQALPTYAMSCIKLPKERILQGFKGDVGEEDLLFKVQRTLNKLRRTEFKVF 153
           DK +L  A A A P   +S  ++ KE   QGFKGD+GE+DLLFKV+RTLNKLRRTEFKVF
Sbjct: 52  DKIVLHDAAAAAGP--LISIHRVNKES-WQGFKGDIGEQDLLFKVERTLNKLRRTEFKVF 111

Query: 154 LFSEN-DDSNANLEMKGWPSQ 174
           L  EN DDSNA+LEMKG+P Q
Sbjct: 112 LVGENSDDSNASLEMKGFPFQ 129

[Close]

BLAST of HG10021756.1 vs. ExPASy TrEMBL
Match: A0A6J1DNI1 (protein LURP-one-related 7 OS=Momordica charantia OX=3673 GN=LOC111022016 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.3e-14
Identity = 51/81 (62.96%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 94  DKELLLKAIAQALPTYAMSCIKLPKERILQGFKGDVGEEDLLFKVQRTLNKLRRTEFKVF 153
           DK LLL A A A P   +  I    +    GFKGDVGEE+LLFKV R++NKL RTEFKVF
Sbjct: 53  DKILLLDAAAAADP---LISIHRHSKESWHGFKGDVGEENLLFKVHRSINKLTRTEFKVF 112

Query: 154 LFSEN-DDSNANLEMKGWPSQ 174
           L  EN DDSNA+LEMKGWP Q
Sbjct: 113 LHGENLDDSNASLEMKGWPFQ 130

[Close]

BLAST of HG10021756.1 vs. ExPASy TrEMBL
Match: A0A803Q724 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.1e-14
Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = 0


Query: 21  EVLNQNRS---VSPNVSNDVRRVLYNILKIQGVNDLCKYLGLPSHFSRKKSFELRFLKEK 80
           +V+N ++S    SPN  +D+R   +N   ++    +CKYLGLP   SR K     FLK++
Sbjct: 583 QVINFSKSSILFSPNTLSDIRTTFFNAFNLEDRPFICKYLGLPQCLSRSKYHSFAFLKDR 642

Query: 81  VLKVIASWKGNMFSVGDKELLLKAIAQALPTYAMSCIKLPKERILQGFK 127
           V  V+  W    FS   KE+LLKA+ QA+P YAM+C +LP  ++ +GF+
Sbjct: 643 VNSVLRGWSVKCFSRAGKEVLLKAVIQAIPAYAMACFRLP-VKLCKGFR 690

[Close]

BLAST of HG10021756.1 vs. ExPASy TrEMBL
Match: A0A803QAN3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 6.7e-14
Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 21  EVLNQNRSV---SPNVSNDVRRVLYNILKIQGVNDLCKYLGLPSHFSRKKSFELRFLKEK 80
           ++LN N+SV   SPN ++D++    + L +       +YLGLPS+  R K      +KE+
Sbjct: 571 QMLNNNKSVMSFSPNTADDIKNFFAHTLDMPITECHERYLGLPSYSGRDKQELFSHIKER 630

Query: 81  VLKVIASWKGNMFSVGDKELLLKAIAQALPTYAMSCIKLPKE 120
           V K++ SW   +FS+G KE+LLKA+ Q++PTYAMSC KL K+
Sbjct: 631 VWKLLHSWNEKIFSIGGKEVLLKAVVQSIPTYAMSCFKLTKK 672

The following BLAST results are available for this feature:

BLAST of HG10021756.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884438.1	3.3e-15	69.14	protein LURP-one-related 7 [Benincasa hispida]	[more]
XP_023523465.1	1.3e-14	64.20	protein LURP-one-related 7 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023523464.1	1.3e-14	61.73	protein LURP-one-related 7 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_030967653.1	2.8e-14	37.50	uncharacterized protein LOC115988147 [Quercus lobata]	[more]
XP_022948358.1	2.8e-14	65.43	protein LURP-one-related 7 [Cucurbita moschata]	[more]

BLAST of HG10021756.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10021756.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A803Q1K6	1.3e-14	44.74	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A6J1G943	1.3e-14	65.43	protein LURP-one-related 7 OS=Cucurbita moschata OX=3662 GN=LOC111452060 PE=3 SV...	[more]
A0A6J1DNI1	2.3e-14	62.96	protein LURP-one-related 7 OS=Momordica charantia OX=3673 GN=LOC111022016 PE=3 S...	[more]
A0A803Q724	5.1e-14	40.37	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803QAN3	6.7e-14	43.14	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of HG10021756.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038595	LURP-one-related superfamily	GENE3D	2.40.160.200		coord: 65..184 e-value: 4.4E-6 score: 28.3
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 7..120
None	No IPR available	PANTHER	PTHR33116:SF45	SUBFAMILY NOT NAMED	coord: 7..120

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10021756	HG10021756	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10021756.1-cds	HG10021756.1-cds-Chr05:16038252..16038266	CDS
HG10021756.1-cds	HG10021756.1-cds-Chr05:16040089..16040162	CDS
HG10021756.1-cds	HG10021756.1-cds-Chr05:16040888..16041153	CDS
HG10021756.1-cds	HG10021756.1-cds-Chr05:16044949..16045108	CDS
HG10021756.1-cds	HG10021756.1-cds-Chr05:16045258..16045300	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10021756.1	HG10021756.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane