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HG10021634.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGATGAACAGAGTTTGGAGCTTACACAGTTCTGTCAACCTATTTTGGCTTTGTATCTTCTTCTTCTTCTTCCTTTTCGGCCATGGATTTCCAACAGGAGTCGAATCTGCTGAAGACGAGACCCCAGTATCCGATCTTTTGAGTCGAGACGAGTGGAGGCAGATAGCTGGATATGGTGAGGAGAGACTGTCCACAGTTTTGGTCACAGGCTCTGTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACCTCAAGTTCATGCATGGCCTATTAAAGGTACTACAATTGCATCTAACATTTTATTTTAAAAAAGGAAAAACACCTATGAAATAAGCTTGGTTTTTACCTTTCTGATGATTTTATACAAACCAAATCAATCACTGCAGGTGCCATGGTGGGTGTGAATTGCCATAACACTGGAAAGAACAGCAAATCTTCTGATTGGGTACATGGAGTCACTGATGAATTTGGAGACTTCATTATTGATATTCCGTCCCATCTTCATGCAACCTTAAGCTTTGAAAATGTCTGTTCCATCAAGATTCTTCGGACACCGAAGAACACACACTGCCGACCTGCTCATTTAGCTGGCAGGAAGCAGCTGCAATTATCATCGTTCGGAGGTGGCATCCGTACATATACTTCTGGCATCCTCAGGTTGCAGGACCAAACATCTCGACCCCTGCAAGCTTGTACAAATGAGGGGAGGGGTGACCATCAGATCTCATGGTAG ATGATGATGAACAGAGTTTGGAGCTTACACAGTTCTGTCAACCTATTTTGGCTTTGTATCTTCTTCTTCTTCTTCCTTTTCGGCCATGGATTTCCAACAGGAGTCGAATCTGCTGAAGACGAGACCCCAGTATCCGATCTTTTGAGTCGAGACGAGTGGAGGCAGATAGCTGGATATGGTGAGGAGAGACTGTCCACAGTTTTGGTCACAGGCTCTGTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACCTCAAGTTCATGCATGGCCTATTAAAGGTGCCATGGTGGGTGTGAATTGCCATAACACTGGAAAGAACAGCAAATCTTCTGATTGGGTACATGGAGTCACTGATGAATTTGGAGACTTCATTATTGATATTCCGTCCCATCTTCATGCAACCTTAAGCTTTGAAAATGTCTGTTCCATCAAGATTCTTCGGACACCGAAGAACACACACTGCCGACCTGCTCATTTAGCTGGCAGGAAGCAGCTGCAATTATCATCGTTCGGAGGTGGCATCCGTACATATACTTCTGGCATCCTCAGGTTGCAGGACCAAACATCTCGACCCCTGCAAGCTTGTACAAATGAGGGGAGGGGTGACCATCAGATCTCATGGTAG ATGATGATGAACAGAGTTTGGAGCTTACACAGTTCTGTCAACCTATTTTGGCTTTGTATCTTCTTCTTCTTCTTCCTTTTCGGCCATGGATTTCCAACAGGAGTCGAATCTGCTGAAGACGAGACCCCAGTATCCGATCTTTTGAGTCGAGACGAGTGGAGGCAGATAGCTGGATATGGTGAGGAGAGACTGTCCACAGTTTTGGTCACAGGCTCTGTTCTTTGTGAAGCTTGTTTGCATGGTGATGAACCTCAAGTTCATGCATGGCCTATTAAAGGTGCCATGGTGGGTGTGAATTGCCATAACACTGGAAAGAACAGCAAATCTTCTGATTGGGTACATGGAGTCACTGATGAATTTGGAGACTTCATTATTGATATTCCGTCCCATCTTCATGCAACCTTAAGCTTTGAAAATGTCTGTTCCATCAAGATTCTTCGGACACCGAAGAACACACACTGCCGACCTGCTCATTTAGCTGGCAGGAAGCAGCTGCAATTATCATCGTTCGGAGGTGGCATCCGTACATATACTTCTGGCATCCTCAGGTTGCAGGACCAAACATCTCGACCCCTGCAAGCTTGTACAAATGAGGGGAGGGGTGACCATCAGATCTCATGGTAG MMMNRVWSLHSSVNLFWLCIFFFFFLFGHGFPTGVESAEDETPVSDLLSRDEWRQIAGYGEERLSTVLVTGSVLCEACLHGDEPQVHAWPIKGAMVGVNCHNTGKNSKSSDWVHGVTDEFGDFIIDIPSHLHATLSFENVCSIKILRTPKNTHCRPAHLAGRKQLQLSSFGGGIRTYTSGILRLQDQTSRPLQACTNEGRGDHQISW Homology
BLAST of HG10021634.1 vs. NCBI nr
Match: XP_038895694.1 (uncharacterized protein LOC120083866 [Benincasa hispida]) HSP 1 Score: 417.2 bits (1071), Expect = 8.5e-113 Identity = 192/205 (93.66%), Postives = 198/205 (96.59%), Query Frame = 0
BLAST of HG10021634.1 vs. NCBI nr
Match: XP_004139527.1 (uncharacterized protein LOC101215830 [Cucumis sativus] >XP_031736160.1 uncharacterized protein LOC116401783 [Cucumis sativus] >KAE8637362.1 hypothetical protein CSA_011912 [Cucumis sativus] >KGN65025.1 hypothetical protein Csa_022721 [Cucumis sativus]) HSP 1 Score: 401.7 bits (1031), Expect = 3.7e-108 Identity = 187/206 (90.78%), Postives = 193/206 (93.69%), Query Frame = 0
BLAST of HG10021634.1 vs. NCBI nr
Match: XP_008463598.1 (PREDICTED: uncharacterized protein LOC103501709 [Cucumis melo] >KAA0035706.1 Pollen_Ole_e_I domain-containing protein [Cucumis melo var. makuwa] >TYK30840.1 Pollen_Ole_e_I domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 393.7 bits (1010), Expect = 1.0e-105 Identity = 183/206 (88.83%), Postives = 190/206 (92.23%), Query Frame = 0
BLAST of HG10021634.1 vs. NCBI nr
Match: XP_022142515.1 (uncharacterized protein LOC111012615 [Momordica charantia]) HSP 1 Score: 349.4 bits (895), Expect = 2.2e-92 Identity = 163/207 (78.74%), Postives = 175/207 (84.54%), Query Frame = 0
BLAST of HG10021634.1 vs. NCBI nr
Match: XP_022927337.1 (uncharacterized protein LOC111434195 [Cucurbita moschata]) HSP 1 Score: 344.0 bits (881), Expect = 9.2e-91 Identity = 163/194 (84.02%), Postives = 173/194 (89.18%), Query Frame = 0
BLAST of HG10021634.1 vs. ExPASy TrEMBL
Match: A0A0A0LT20 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181380 PE=4 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 1.8e-108 Identity = 187/206 (90.78%), Postives = 193/206 (93.69%), Query Frame = 0
BLAST of HG10021634.1 vs. ExPASy TrEMBL
Match: A0A5D3E5G2 (Pollen_Ole_e_I domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00350 PE=4 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 4.9e-106 Identity = 183/206 (88.83%), Postives = 190/206 (92.23%), Query Frame = 0
BLAST of HG10021634.1 vs. ExPASy TrEMBL
Match: A0A1S3CJM3 (uncharacterized protein LOC103501709 OS=Cucumis melo OX=3656 GN=LOC103501709 PE=4 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 4.9e-106 Identity = 183/206 (88.83%), Postives = 190/206 (92.23%), Query Frame = 0
BLAST of HG10021634.1 vs. ExPASy TrEMBL
Match: A0A6J1CL55 (uncharacterized protein LOC111012615 OS=Momordica charantia OX=3673 GN=LOC111012615 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92 Identity = 163/207 (78.74%), Postives = 175/207 (84.54%), Query Frame = 0
BLAST of HG10021634.1 vs. ExPASy TrEMBL
Match: A0A6J1EGW2 (uncharacterized protein LOC111434195 OS=Cucurbita moschata OX=3662 GN=LOC111434195 PE=4 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 4.4e-91 Identity = 163/194 (84.02%), Postives = 173/194 (89.18%), Query Frame = 0
BLAST of HG10021634.1 vs. TAIR 10
Match: AT5G47635.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 123.6 bits (309), Expect = 1.8e-28 Identity = 62/146 (42.47%), Postives = 87/146 (59.59%), Query Frame = 0
BLAST of HG10021634.1 vs. TAIR 10
Match: AT4G17215.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 108.6 bits (270), Expect = 6.0e-24 Identity = 61/144 (42.36%), Postives = 82/144 (56.94%), Query Frame = 0
BLAST of HG10021634.1 vs. TAIR 10
Match: AT2G40113.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 107.5 bits (267), Expect = 1.3e-23 Identity = 66/184 (35.87%), Postives = 92/184 (50.00%), Query Frame = 0
BLAST of HG10021634.1 vs. TAIR 10
Match: AT5G15780.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 51.6 bits (122), Expect = 8.8e-07 Identity = 33/125 (26.40%), Postives = 60/125 (48.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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