HG10020210.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCAAAAAAGGGCTCGGCGGTGGAGCCGCGCTTTCAAAGGACGCGCCTTGGAGGGCCTCCGGCAAACCCATTCCCAAAATCCACCATGCTCCTCTGCTCCGCATTTCCCAATCCCCCTTTTCCAGTTACGCCCTCTCTGTAATGAAGGCAAGCGCTCTCATTCTCTTCCCTTCTTCTCTCTTTTCTCACTGGGTTTCTGTTTGATTCTTTTCTTGATTTTGGGGGATATCTTTATTTTGTTTTTGCAGCATCCTGATCCGATTGGAAGTGGGTTGGCTATGGATGCCATTTTAGAAGCGGCTGGGCCTGATTGTATTGTGCCTGGACAATCTGCACCTGTTAAATTACTTGGTCTCAAGGTACTTTTTCTTCTATCCCATCTTTTGTTGGTTGGAACCCTTGTTTGATTTTTCTGGGATTACTTGATTTTTCAATTACTAGGGATTTCTTAGGTTTTCTCACTCGAATTCAGCGTGTTTGCATTTGGTTAACTGGCCTTGCTAATTGCTTCTACATTGTTTTGATGGTTTCGAATTACCAGTAAATGAATTATGTATTGTTGCTACAACTTTTGGAAGGGTTTTGTTTGAAAATGTGTTAAAATGTGACATTTACCCTTAGAAAGCATCAAGAGAAGTAGTGAATGAACTGAAATTCCTTCATTTAGTATCGTCTGGGCACTGTCCAAATGTATTTAAAGAGTGGAAGAAAAAAATTCTAATGTAAACAATTTATTAACTTAACCAATTTAGTCATAAAATTGTGTGTAAATTTAAACAAACTAACTACTTCAGTAACAAACTGATGGTGTGTGTGACTTTTGAGGTATCTAAACACTTTTTCATTTAGTTGTTTTGGAGAAACTACTAGTAAAGAGTTCTTTGAAAAAGCACTTATGATCGTGTAACCAATGGAGAAGAGATTAATTAGTTGTTTACGATTCCAGTAGTTATGCTAAACAGACTCTGAATCATCTACAGATTCCACACTCAGATTTTCCATCAGTTTATGAGATTTTATCTTGTTTTGAATCTGTGGGTACTGCTATCCAGTGCTAAGCATGTTCTATCAGGGTTTTTTTTTTTTTTTTGGCATGTATCAAAATATTCTTTTTCATAAGAACATATATCAATAATCAATGTCGAGTCTTGTCAATGATCTCTTCAATGTTAGAAGGTGAGAGGAGGGTAGAACATAGAGGGGTTGATGAGGCCATATTTTTTAGTGTGGTGAAATAAGTATTATTGTAAATAATGGAAATGATGCTTCATTACGTCAGTGAAAATGTAAACGACAGGTCTGAGTCAAGAGATACCAATGAATCTCAGTTACTGGTTTGATAATCTCTAGTTGTCTTGTCTCTGAGATAATAGAGAAGAAAAAAATGATAGACCTTCAATACACCACAATTTCAGTAAATGCAAGTACAGTAAGGGAAGACACTGTTGAGGATAGGCAGTTATTTATTGTAATCAAGGAGTTTGTAGGGTGTTTTCTGTAATTAGTAGTAATTTTTTTTTAGGTATTTAGAAGAGTGATGGTTTGCATTAGTATTATACATTTAGCAACCGAGTAAAAGATGGGGAAGGATCTCAAAGTTATAGTGGATATTCTGATAAGAGTTTTTAGAGCTCTTGAATGTTTGAAGTAAGCTCTTGAATGTTTGGATATTCTGGGGAAGGATCTTAGGTGTTTTGGGGTCTCTCCTTATTTCATTTATTCAATAAAATGTATCTTCTCTAAAAAAAAGAAAAATAAAGGTTTGGAGTAAAGATGTAATACAATCTATATAATCAATGCAGTTTACGATTGAGTTGAGTCATTGACTATGTTATCAGAAAAATGTTTAGATGCTATGGCTTTACTTGTAGGGTCAGGGTGGATGCCAGTAGTACTGCTTCATCATTACTAAATTGAATCAATATTTTGAGTTTATAAGAACTGCGTTTTCTGTATATTTTGGTCTTATTATGCCACATGGACAGGTATGGCCCATTGATATCGATCTGAAGGTTCTTGAGCCTGTTGGCCGAGAGCTTAAATTACTTGGAAAGGTAAATGGACACAACTCTATATCTGTGTTTTGTGAAGTTTTTTCCCCCCTGAATGTATGTTTCTTAGTGCTTGGAAGTATATAGATTGAGTGCATGTTTGGGAGTGATTTTCAAATGATTAAAATCACTTTTGTCATGTTCAAAATCACTCTGAAACACACATTTAATCACTCAAAATCAATTCAATGTTTGATTTTATACATTAAACATAATTTTCAGACTATGAAAATTGATTTTTAATGATTAAAAGGATTTTCGTAGTGATTTTGAAAATGACAAAAGTGATTTCAATGATTTTAGAATCACTCTCAAACATGTCAAGGTTCTACTTTTGAAAAACCTTATCGTCTCCAAACCTTGGGTGGGCAAAACCGCCTCAAGAATTAATACGACCATAGGAGTGGTTCATGATCAATAATCCAGTTATAAAATGATCAAAGAAAGTAATTTGTCTGTATTGGAATCATCTCTAACATGTTGTAAACGGATCAATCCACATTGTAGAAACATGAAATCAGGACAAGTTCTTATCCATAATTCAGATATTCATCATATCAGATTTTGGGTGAAGTAGTAGCATGTAGTTCCCCTATTCTTATTGTCTCTTCTATATTCAAATCATGTTCCTTGAGTTGAAACAATATTGACACAAATTTTAACATTTTAGTTTTAGCCTCGAGACTTTTAGGAATCTGACCTGCATTTCTTTTTATTATTGTCACCATTCTCATTCTTCTGTTTTTTTCTTCCCTCTGAAGTTTATGGATGACGCGGTGAACCTCATGAACAAGTCGTTCATAGATCGCTAG ATGTCCAAAAAAGGGCTCGGCGGTGGAGCCGCGCTTTCAAAGGACGCGCCTTGGAGGGCCTCCGGCAAACCCATTCCCAAAATCCACCATGCTCCTCTGCTCCGCATTTCCCAATCCCCCTTTTCCAGTTACGCCCTCTCTCATCCTGATCCGATTGGAAGTGGGTTGGCTATGGATGCCATTTTAGAAGCGGCTGGGCCTGATTGTATTGTGCCTGGACAATCTGCACCTGTTAAATTACTTGGTCTCAAGGTATGGCCCATTGATATCGATCTGAAGGTTCTTGAGCCTGTTGGCCGAGAGCTTAAATTACTTGGAAAGTTTATGGATGACGCGGTGAACCTCATGAACAAGTCGTTCATAGATCGCTAG ATGTCCAAAAAAGGGCTCGGCGGTGGAGCCGCGCTTTCAAAGGACGCGCCTTGGAGGGCCTCCGGCAAACCCATTCCCAAAATCCACCATGCTCCTCTGCTCCGCATTTCCCAATCCCCCTTTTCCAGTTACGCCCTCTCTCATCCTGATCCGATTGGAAGTGGGTTGGCTATGGATGCCATTTTAGAAGCGGCTGGGCCTGATTGTATTGTGCCTGGACAATCTGCACCTGTTAAATTACTTGGTCTCAAGGTATGGCCCATTGATATCGATCTGAAGGTTCTTGAGCCTGTTGGCCGAGAGCTTAAATTACTTGGAAAGTTTATGGATGACGCGGTGAACCTCATGAACAAGTCGTTCATAGATCGCTAG MSKKGLGGGAALSKDAPWRASGKPIPKIHHAPLLRISQSPFSSYALSHPDPIGSGLAMDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDIDLKVLEPVGRELKLLGKFMDDAVNLMNKSFIDR Homology
BLAST of HG10020210.1 vs. NCBI nr
Match: KAA0043981.1 (uncharacterized protein E6C27_scaffold236G003260 [Cucumis melo var. makuwa] >TYK25159.1 uncharacterized protein E5676_scaffold352G002850 [Cucumis melo var. makuwa]) HSP 1 Score: 241.5 bits (615), Expect = 3.8e-60 Identity = 117/123 (95.12%), Postives = 121/123 (98.37%), Query Frame = 0
BLAST of HG10020210.1 vs. NCBI nr
Match: XP_038903012.1 (uncharacterized protein LOC120089717 [Benincasa hispida]) HSP 1 Score: 237.3 bits (604), Expect = 7.2e-59 Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 0
BLAST of HG10020210.1 vs. NCBI nr
Match: XP_008442724.1 (PREDICTED: uncharacterized protein LOC103486514 [Cucumis melo]) HSP 1 Score: 236.1 bits (601), Expect = 1.6e-58 Identity = 117/126 (92.86%), Postives = 121/126 (96.03%), Query Frame = 0
BLAST of HG10020210.1 vs. NCBI nr
Match: KAE8651047.1 (hypothetical protein Csa_001390 [Cucumis sativus]) HSP 1 Score: 233.8 bits (595), Expect = 7.9e-58 Identity = 115/123 (93.50%), Postives = 119/123 (96.75%), Query Frame = 0
BLAST of HG10020210.1 vs. NCBI nr
Match: XP_022144765.1 (uncharacterized protein LOC111014375 [Momordica charantia]) HSP 1 Score: 229.2 bits (583), Expect = 2.0e-56 Identity = 113/126 (89.68%), Postives = 119/126 (94.44%), Query Frame = 0
BLAST of HG10020210.1 vs. ExPASy TrEMBL
Match: A0A5A7TQX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002850 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 1.8e-60 Identity = 117/123 (95.12%), Postives = 121/123 (98.37%), Query Frame = 0
BLAST of HG10020210.1 vs. ExPASy TrEMBL
Match: A0A1S3B749 (uncharacterized protein LOC103486514 OS=Cucumis melo OX=3656 GN=LOC103486514 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 7.8e-59 Identity = 117/126 (92.86%), Postives = 121/126 (96.03%), Query Frame = 0
BLAST of HG10020210.1 vs. ExPASy TrEMBL
Match: A0A6J1CSK2 (uncharacterized protein LOC111014375 OS=Momordica charantia OX=3673 GN=LOC111014375 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 9.5e-57 Identity = 113/126 (89.68%), Postives = 119/126 (94.44%), Query Frame = 0
BLAST of HG10020210.1 vs. ExPASy TrEMBL
Match: A0A6J1FEU8 (uncharacterized protein LOC111443428 OS=Cucurbita moschata OX=3662 GN=LOC111443428 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 6.4e-53 Identity = 105/126 (83.33%), Postives = 115/126 (91.27%), Query Frame = 0
BLAST of HG10020210.1 vs. ExPASy TrEMBL
Match: A0A6J1KUA5 (uncharacterized protein LOC111498726 OS=Cucurbita maxima OX=3661 GN=LOC111498726 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 1.4e-52 Identity = 105/126 (83.33%), Postives = 114/126 (90.48%), Query Frame = 0
BLAST of HG10020210.1 vs. TAIR 10
Match: AT2G36835.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 172.9 bits (437), Expect = 1.6e-43 Identity = 81/127 (63.78%), Postives = 108/127 (85.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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