HG10017393.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10017393.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NAD(P)H-quinone oxidoreductase chain 4, chloroplastic
Location	Chr03: 13970917 .. 13972326 (-)
Sequence length	1410
RNA-Seq Expression	HG10017393.1
Synteny	HG10017393.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATGGTATACTATATGTATCTGTGTACTCGAGCTGCTTCTAACAACCTATGCATTTTGTTATCATTTCGAATTAGACGATCCATTAATCCAACTGATGGAGGATTATAAATGGATCCCTTTTTTGGATTTTTACTGGAGATTGGGAATCGATGGACTTTCCATAGGACCCATTTTACTGACGGGGTTTATCACCACTTTAGCTACTTTAGCGGCTTGGCCAGTTACTCGAGATTCCCGATTATTCCATTTTCTAATGTTAGCAATGTATAGCGGTCAAATAGGATCATTTTCTGCTCGAGACCTCTTACTATTTTTTATCATGTGGGAGTTAGAATTAATTCCCGTTTATCTACTTCTATCGATGTGGGGCGGAAAGAAACGGTTGTATTCAGCTACAAAGTTTATTTTGTACACTGCGGGAGGTTCCATTTTTTTGTTAATGGGAGTTCTGGGTATCGGTTTATATGGTTCTAATGAACCAACTTTAAATTTTGAAACATCAGCTAATCAATCGTATCCTATAGCACTGGAAATACTATTCTATATCGGATTTCTTATTGCTTTTGCTGTCAAATCACCGATTATACCCTTACATACATGGTTACCAGATACTCACGGAGAGGCACATTACAGTACTTGTATGCTTCTAGCCGGAATCTTATTAAAAATGGGAGCATATGGATTGGTTCGGATCAATATGGAATTATTACCCCACGCCCATTCTATCTTTTCACCCTGGTTGATCATAGTAGGCATAATTCAAATAATCTATGCAGCTTCAACATCTTCGGGTCAACGCAATTTAAAAAAAAGAATAGCTTATTCCTCCGTCTCTCATATGGGTTTCATAATTATAGGAATTGGTTCTATAAGCGATACGGGACTGAATGGAGCTATTTTACAAATAATCTCTCATGGATTTATCGGCGCTGCGCTTTTTTTCTTGGCGGGAACAAGTTATGATAGAATACGTCTGGTTTATCTCGATGAAATGGGAGGACTGGCTATCCCAATTCCAAAAATCTTTACGACTTTCAGTATCTTATCGATGGCTTCCCTTGCATTGCCCGGTATGAGCGGTTTTGTTGCAGAATTAATAGTCTTTTTTGGAATAATTACCAGCCAAAAATATCTTTTAATGACAAAAATACTAATTACTTTGGTAATGGCAATTGGAATTATATTAACTCCCATTTATTTATTATCTATGTTACGCCAGATGTTCTATGGATACAAGCTTTTTAAGGCTCAAAATTCTTATTTTTTTGATTCGGGACCACGAGAGTTGTTTGTTGCGATCTCTATCCTTATACCTGTCATAGGTATTGGTATTTATCCAGATTTTGTTTTCTCACTATCAGTTGACAAGGTCGAAACTATTTTATCTAATTATTTTGCTAGATAG

mRNA sequence

ATGAGATGGTATACTATATGTATCTGTGTACTCGAGCTGCTTCTAACAACCTATGCATTTTGTTATCATTTCGAATTAGACGATCCATTAATCCAACTGATGGAGGATTATAAATGGATCCCTTTTTTGGATTTTTACTGGAGATTGGGAATCGATGGACTTTCCATAGGACCCATTTTACTGACGGGGTTTATCACCACTTTAGCTACTTTAGCGGCTTGGCCAGTTACTCGAGATTCCCGATTATTCCATTTTCTAATGTTAGCAATGTATAGCGGTCAAATAGGATCATTTTCTGCTCGAGACCTCTTACTATTTTTTATCATGTGGGAGTTAGAATTAATTCCCGTTTATCTACTTCTATCGATGTGGGGCGGAAAGAAACGGTTGTATTCAGCTACAAAGTTTATTTTGTACACTGCGGGAGGTTCCATTTTTTTGTTAATGGGAGTTCTGGGTATCGGTTTATATGGTTCTAATGAACCAACTTTAAATTTTGAAACATCAGCTAATCAATCGTATCCTATAGCACTGGAAATACTATTCTATATCGGATTTCTTATTGCTTTTGCTGTCAAATCACCGATTATACCCTTACATACATGGTTACCAGATACTCACGGAGAGGCACATTACAGTACTTGTATGCTTCTAGCCGGAATCTTATTAAAAATGGGAGCATATGGATTGGTTCGGATCAATATGGAATTATTACCCCACGCCCATTCTATCTTTTCACCCTGGTTGATCATAGTAGGCATAATTCAAATAATCTATGCAGCTTCAACATCTTCGGGTCAACGCAATTTAAAAAAAAGAATAGCTTATTCCTCCGTCTCTCATATGGGTTTCATAATTATAGGAATTGGTTCTATAAGCGATACGGGACTGAATGGAGCTATTTTACAAATAATCTCTCATGGATTTATCGGCGCTGCGCTTTTTTTCTTGGCGGGAACAAGTTATGATAGAATACGTCTGGTTTATCTCGATGAAATGGGAGGACTGGCTATCCCAATTCCAAAAATCTTTACGACTTTCAGTATCTTATCGATGGCTTCCCTTGCATTGCCCGGTATGAGCGGTTTTGTTGCAGAATTAATAGTCTTTTTTGGAATAATTACCAGCCAAAAATATCTTTTAATGACAAAAATACTAATTACTTTGGTAATGGCAATTGGAATTATATTAACTCCCATTTATTTATTATCTATGTTACGCCAGATGTTCTATGGATACAAGCTTTTTAAGGCTCAAAATTCTTATTTTTTTGATTCGGGACCACGAGAGTTGTTTGTTGCGATCTCTATCCTTATACCTGTCATAGGTATTGGTATTTATCCAGATTTTGTTTTCTCACTATCAGTTGACAAGGTCGAAACTATTTTATCTAATTATTTTGCTAGATAG

Coding sequence (CDS)

ATGAGATGGTATACTATATGTATCTGTGTACTCGAGCTGCTTCTAACAACCTATGCATTTTGTTATCATTTCGAATTAGACGATCCATTAATCCAACTGATGGAGGATTATAAATGGATCCCTTTTTTGGATTTTTACTGGAGATTGGGAATCGATGGACTTTCCATAGGACCCATTTTACTGACGGGGTTTATCACCACTTTAGCTACTTTAGCGGCTTGGCCAGTTACTCGAGATTCCCGATTATTCCATTTTCTAATGTTAGCAATGTATAGCGGTCAAATAGGATCATTTTCTGCTCGAGACCTCTTACTATTTTTTATCATGTGGGAGTTAGAATTAATTCCCGTTTATCTACTTCTATCGATGTGGGGCGGAAAGAAACGGTTGTATTCAGCTACAAAGTTTATTTTGTACACTGCGGGAGGTTCCATTTTTTTGTTAATGGGAGTTCTGGGTATCGGTTTATATGGTTCTAATGAACCAACTTTAAATTTTGAAACATCAGCTAATCAATCGTATCCTATAGCACTGGAAATACTATTCTATATCGGATTTCTTATTGCTTTTGCTGTCAAATCACCGATTATACCCTTACATACATGGTTACCAGATACTCACGGAGAGGCACATTACAGTACTTGTATGCTTCTAGCCGGAATCTTATTAAAAATGGGAGCATATGGATTGGTTCGGATCAATATGGAATTATTACCCCACGCCCATTCTATCTTTTCACCCTGGTTGATCATAGTAGGCATAATTCAAATAATCTATGCAGCTTCAACATCTTCGGGTCAACGCAATTTAAAAAAAAGAATAGCTTATTCCTCCGTCTCTCATATGGGTTTCATAATTATAGGAATTGGTTCTATAAGCGATACGGGACTGAATGGAGCTATTTTACAAATAATCTCTCATGGATTTATCGGCGCTGCGCTTTTTTTCTTGGCGGGAACAAGTTATGATAGAATACGTCTGGTTTATCTCGATGAAATGGGAGGACTGGCTATCCCAATTCCAAAAATCTTTACGACTTTCAGTATCTTATCGATGGCTTCCCTTGCATTGCCCGGTATGAGCGGTTTTGTTGCAGAATTAATAGTCTTTTTTGGAATAATTACCAGCCAAAAATATCTTTTAATGACAAAAATACTAATTACTTTGGTAATGGCAATTGGAATTATATTAACTCCCATTTATTTATTATCTATGTTACGCCAGATGTTCTATGGATACAAGCTTTTTAAGGCTCAAAATTCTTATTTTTTTGATTCGGGACCACGAGAGTTGTTTGTTGCGATCTCTATCCTTATACCTGTCATAGGTATTGGTATTTATCCAGATTTTGTTTTCTCACTATCAGTTGACAAGGTCGAAACTATTTTATCTAATTATTTTGCTAGATAG

Protein sequence

MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEILFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGMSGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQNSYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR

Homology

[Close]

BLAST of HG10017393.1 vs. NCBI nr
Match: YP_009456197.1 (NADH dehydrogenase subunit 4 [Lagenaria siceraria] >AUJ21962.1 NADH dehydrogenase subunit 4 [Lagenaria siceraria] >QNM38582.1 NADH-plastoquinone oxidoreductase subunit 4 [Lagenaria siceraria var. microcarpa])

HSP 1 Score: 908.3 bits (2346), Expect = 2.8e-260
Identity = 469/469 (100.00%), Postives = 469/469 (100.00%), Query Frame = 0


Query: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60
           MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL
Sbjct: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60

Query: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120
           LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL
Sbjct: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120

Query: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180
           LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI
Sbjct: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180

Query: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240
           LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH
Sbjct: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240

Query: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300
           AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA
Sbjct: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300

Query: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360
           ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM
Sbjct: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360

Query: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420
           SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN
Sbjct: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420

Query: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 470
           SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR
Sbjct: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 469

[Close]

BLAST of HG10017393.1 vs. NCBI nr
Match: QZL38645.1 (NADH dehydrogenase subunit D [Citrullus naudinianus])

HSP 1 Score: 903.3 bits (2333), Expect = 8.9e-259
Identity = 466/469 (99.36%), Postives = 467/469 (99.57%), Query Frame = 0


Query: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60
           MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL
Sbjct: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60

Query: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120
           LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL
Sbjct: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120

Query: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180
           LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI
Sbjct: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180

Query: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240
           LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH
Sbjct: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240

Query: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300
           AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA
Sbjct: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300

Query: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360
           ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM
Sbjct: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360

Query: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420
           SGFVAELIVFFGIITSQKYLLMTKILITLVMAIG+ILTPIYLLSMLRQMFYGYKLF AQN
Sbjct: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGMILTPIYLLSMLRQMFYGYKLFNAQN 420

Query: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 470
           SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVE ILSNYFAR
Sbjct: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVEAILSNYFAR 469

[Close]

BLAST of HG10017393.1 vs. NCBI nr
Match: QSQ72361.1 (NADH dehydrogenase subunit D [Benincasa hispida])

HSP 1 Score: 901.7 bits (2329), Expect = 2.6e-258
Identity = 465/469 (99.15%), Postives = 466/469 (99.36%), Query Frame = 0


Query: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60
           MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL
Sbjct: 38  MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 97

Query: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120
           LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL
Sbjct: 98  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 157

Query: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180
           LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI
Sbjct: 158 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 217

Query: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240
           LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH
Sbjct: 218 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 277

Query: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300
           AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA
Sbjct: 278 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 337

Query: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360
           ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM
Sbjct: 338 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 397

Query: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420
           SGFVAELIVFFGIITSQKYL MTKILITLVMAIG+ILTPIYLLSMLRQMFYGYKLF AQN
Sbjct: 398 SGFVAELIVFFGIITSQKYLFMTKILITLVMAIGMILTPIYLLSMLRQMFYGYKLFNAQN 457

Query: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 470
           SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVE ILSNYFAR
Sbjct: 458 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVEAILSNYFAR 506

[Close]

BLAST of HG10017393.1 vs. NCBI nr
Match: YP_010131148.1 (NADH-plastoquinone oxidoreductase subunit 4 [Benincasa hispida] >QPZ75796.1 NADH-plastoquinone oxidoreductase subunit 4 [Benincasa hispida])

HSP 1 Score: 901.7 bits (2329), Expect = 2.6e-258
Identity = 465/469 (99.15%), Postives = 466/469 (99.36%), Query Frame = 0


Query: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60
           MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL
Sbjct: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60

Query: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120
           LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL
Sbjct: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120

Query: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180
           LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI
Sbjct: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180

Query: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240
           LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH
Sbjct: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240

Query: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300
           AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA
Sbjct: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300

Query: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360
           ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM
Sbjct: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360

Query: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420
           SGFVAELIVFFGIITSQKYL MTKILITLVMAIG+ILTPIYLLSMLRQMFYGYKLF AQN
Sbjct: 361 SGFVAELIVFFGIITSQKYLFMTKILITLVMAIGMILTPIYLLSMLRQMFYGYKLFNAQN 420

Query: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 470
           SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVE ILSNYFAR
Sbjct: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVEAILSNYFAR 469

[Close]

BLAST of HG10017393.1 vs. NCBI nr
Match: YP_009752461.1 (NADH dehydrogenase subunit D [Trichosanthes tricuspidata] >YP_009753754.1 NADH dehydrogenase subunit D [Trichosanthes nervifolia] >QIT04857.1 NADH dehydrogenase subunit D [Trichosanthes tricuspidata] >QIT05365.1 NADH dehydrogenase subunit D [Trichosanthes nervifolia])

HSP 1 Score: 901.4 bits (2328), Expect = 3.4e-258
Identity = 465/469 (99.15%), Postives = 466/469 (99.36%), Query Frame = 0


Query: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60
           MRWYTICICVLELLLTTYAFCYHFELDDPLIQL EDYKWIPFLDFYWRLGIDGLSIGPIL
Sbjct: 38  MRWYTICICVLELLLTTYAFCYHFELDDPLIQLTEDYKWIPFLDFYWRLGIDGLSIGPIL 97

Query: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120
           LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL
Sbjct: 98  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 157

Query: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180
           LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI
Sbjct: 158 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 217

Query: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240
           LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH
Sbjct: 218 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 277

Query: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300
           AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA
Sbjct: 278 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 337

Query: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360
           ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGG+AIPIPKIFTTFSILSMASLALPGM
Sbjct: 338 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAIPIPKIFTTFSILSMASLALPGM 397

Query: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420
           SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLF AQN
Sbjct: 398 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFNAQN 457

Query: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 470
           SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVE ILSNYFAR
Sbjct: 458 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVEAILSNYFAR 506

[Close]

BLAST of HG10017393.1 vs. ExPASy Swiss-Prot
Match: Q4VZL8 (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhD PE=2 SV=2)

HSP 1 Score: 896.7 bits (2316), Expect = 1.1e-259
Identity = 462/469 (98.51%), Postives = 466/469 (99.36%), Query Frame = 0


Query: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60
           MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL
Sbjct: 32  MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 91

Query: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120
           LTGFITTLATLAAWPVTRDSRLF+FLMLAMYSGQIGSFSARDLLLFFIMWE ELIPVYLL
Sbjct: 92  LTGFITTLATLAAWPVTRDSRLFYFLMLAMYSGQIGSFSARDLLLFFIMWEFELIPVYLL 151

Query: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180
           LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI
Sbjct: 152 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 211

Query: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240
           LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH
Sbjct: 212 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 271

Query: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300
           AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA
Sbjct: 272 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 331

Query: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360
           ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM
Sbjct: 332 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 391

Query: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420
           SGFVAELIVFFGIITSQKYLLMTK++ITLVMAIGIILTPIYLLSMLRQMFYGYKLF A+N
Sbjct: 392 SGFVAELIVFFGIITSQKYLLMTKMVITLVMAIGIILTPIYLLSMLRQMFYGYKLFNAKN 451

Query: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 470
           SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVE ILSNYFAR
Sbjct: 452 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVEAILSNYFAR 500

[Close]

BLAST of HG10017393.1 vs. ExPASy Swiss-Prot
Match: Q0ZIW8 (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhD PE=3 SV=1)

HSP 1 Score: 845.1 bits (2182), Expect = 3.8e-244
Identity = 430/469 (91.68%), Postives = 450/469 (95.95%), Query Frame = 0


Query: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60
           +RWYTI IC+LELLLTTY FCYHF+LDDPLIQL+EDYKWI F DF WRLGIDGLSIGPIL
Sbjct: 32  IRWYTIFICMLELLLTTYVFCYHFQLDDPLIQLVEDYKWINFFDFDWRLGIDGLSIGPIL 91

Query: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120
           LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFS+RDLLLFFIMWELELIPVYLL
Sbjct: 92  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLL 151

Query: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180
           LSMWGGKKRLYSATKFILYTAGGSIFLL+GVLGIGLYGSNEPTLNFETSANQSYP+ALEI
Sbjct: 152 LSMWGGKKRLYSATKFILYTAGGSIFLLLGVLGIGLYGSNEPTLNFETSANQSYPVALEI 211

Query: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240
           +FYIGF IAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH
Sbjct: 212 IFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 271

Query: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300
           AHSIFSPWL++VG +QIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSI+DTGLNGA
Sbjct: 272 AHSIFSPWLVVVGTMQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGA 331

Query: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360
           ILQIISHGF+GAALFFLAGTSYDRIRL+YLDEMGG+AIP+PKIFT FSILSMASLALPGM
Sbjct: 332 ILQIISHGFLGAALFFLAGTSYDRIRLIYLDEMGGIAIPMPKIFTMFSILSMASLALPGM 391

Query: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420
           SGFVAELIVFFGIITSQK+LLM KILIT VMAIG+ILTPIY LSM RQMFYGYKLF A N
Sbjct: 392 SGFVAELIVFFGIITSQKFLLMPKILITFVMAIGMILTPIYSLSMSRQMFYGYKLFNAPN 451

Query: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 470
           SYFFDSGPRELFV ISI +PVIGIGIYPDFV SLSVDKVE ILSN+F R
Sbjct: 452 SYFFDSGPRELFVLISIFLPVIGIGIYPDFVLSLSVDKVEAILSNFFYR 500

[Close]

BLAST of HG10017393.1 vs. ExPASy Swiss-Prot
Match: A0ZZ85 (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Gossypium barbadense OX=3634 GN=ndhD PE=3 SV=1)

HSP 1 Score: 840.9 bits (2171), Expect = 7.1e-243
Identity = 428/469 (91.26%), Postives = 447/469 (95.31%), Query Frame = 0


Query: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60
           ++WYTICIC+LELLLTTYAFCYHF LDDPLIQL EDYKWI F DFYWRLGIDGLSIGPIL
Sbjct: 32  IKWYTICICILELLLTTYAFCYHFRLDDPLIQLAEDYKWINFFDFYWRLGIDGLSIGPIL 91

Query: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120
           LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFS+RDLLLFFIMWE ELIPVYLL
Sbjct: 92  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWEFELIPVYLL 151

Query: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180
           LSMWGGKKRLYSATKFILYTAGGS+FLL+GVLG+GLYGSNEPTLNFET ANQSYP+ALEI
Sbjct: 152 LSMWGGKKRLYSATKFILYTAGGSVFLLIGVLGLGLYGSNEPTLNFETLANQSYPVALEI 211

Query: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240
           +FYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH
Sbjct: 212 IFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 271

Query: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300
           AHSIFSPWLIIVG +QIIYAASTS GQRNLKKRIAYSSVSHMGFIIIGIGSI+DTGLNGA
Sbjct: 272 AHSIFSPWLIIVGTMQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGA 331

Query: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360
           ILQIISHGFIGAALFFLAGTSYDR+RLVYLDEMGG+A+ IPKIFT FSILSMASLALPGM
Sbjct: 332 ILQIISHGFIGAALFFLAGTSYDRMRLVYLDEMGGMAVSIPKIFTMFSILSMASLALPGM 391

Query: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420
           SGFVAELIVFFGIITSQKY LM KILIT VMAIG+ILTPIY LSM RQMFYGYKLF A +
Sbjct: 392 SGFVAELIVFFGIITSQKYFLMPKILITFVMAIGMILTPIYSLSMSRQMFYGYKLFNAPS 451

Query: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 470
           SYFFDSGPRELFV+ISI +PVIGIGIYPDFV SLS +KVETIL NYF R
Sbjct: 452 SYFFDSGPRELFVSISIFLPVIGIGIYPDFVLSLSGEKVETILYNYFYR 500

[Close]

BLAST of HG10017393.1 vs. ExPASy Swiss-Prot
Match: Q2L955 (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Gossypium hirsutum OX=3635 GN=ndhD PE=3 SV=1)

HSP 1 Score: 840.9 bits (2171), Expect = 7.1e-243
Identity = 428/469 (91.26%), Postives = 447/469 (95.31%), Query Frame = 0


Query: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60
           ++WYTICIC+LELLLTTYAFCYHF LDDPLIQL EDYKWI F DFYWRLGIDGLSIGPIL
Sbjct: 32  IKWYTICICILELLLTTYAFCYHFRLDDPLIQLAEDYKWINFFDFYWRLGIDGLSIGPIL 91

Query: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120
           LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFS+RDLLLFFIMWE ELIPVYLL
Sbjct: 92  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWEFELIPVYLL 151

Query: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180
           LSMWGGKKRLYSATKFILYTAGGS+FLL+GVLG+GLYGSNEPTLNFET ANQSYP+ALEI
Sbjct: 152 LSMWGGKKRLYSATKFILYTAGGSVFLLIGVLGLGLYGSNEPTLNFETLANQSYPVALEI 211

Query: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240
           +FYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH
Sbjct: 212 IFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 271

Query: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300
           AHSIFSPWLIIVG +QIIYAASTS GQRNLKKRIAYSSVSHMGFIIIGIGSI+DTGLNGA
Sbjct: 272 AHSIFSPWLIIVGTMQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGA 331

Query: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360
           ILQIISHGFIGAALFFLAGTSYDR+RLVYLDEMGG+A+ IPKIFT FSILSMASLALPGM
Sbjct: 332 ILQIISHGFIGAALFFLAGTSYDRMRLVYLDEMGGMAVSIPKIFTMFSILSMASLALPGM 391

Query: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420
           SGFVAELIVFFGIITSQKY LM KILIT VMAIG+ILTPIY LSM RQMFYGYKLF A +
Sbjct: 392 SGFVAELIVFFGIITSQKYFLMPKILITFVMAIGMILTPIYSLSMSRQMFYGYKLFNAPS 451

Query: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 470
           SYFFDSGPRELFV+ISI +PVIGIGIYPDFV SLS +KVETIL NYF R
Sbjct: 452 SYFFDSGPRELFVSISIFLPVIGIGIYPDFVLSLSGEKVETILYNYFYR 500

[Close]

BLAST of HG10017393.1 vs. ExPASy Swiss-Prot
Match: B1A984 (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Carica papaya OX=3649 GN=ndhD PE=3 SV=1)

HSP 1 Score: 839.0 bits (2166), Expect = 2.7e-242
Identity = 427/469 (91.04%), Postives = 446/469 (95.10%), Query Frame = 0


Query: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60
           +RWYTICICVLELLLTTYAFCYHF+LDDPL+QL EDYKWI F DFYWRLGIDGLSIGPIL
Sbjct: 32  IRWYTICICVLELLLTTYAFCYHFQLDDPLVQLTEDYKWINFFDFYWRLGIDGLSIGPIL 91

Query: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120
           LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFS+RDLLLFF+MWELELIPVYLL
Sbjct: 92  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSSRDLLLFFLMWELELIPVYLL 151

Query: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180
           LSMWGGKKRLYSATKFILYTAGGSIFLL+GVLGIGLYGS EPTLNFET  NQSYPIALEI
Sbjct: 152 LSMWGGKKRLYSATKFILYTAGGSIFLLIGVLGIGLYGSTEPTLNFETLTNQSYPIALEI 211

Query: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240
           +FYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH
Sbjct: 212 IFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 271

Query: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300
           AHS+FSPWL++VG +QIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSI+D GLNGA
Sbjct: 272 AHSLFSPWLVVVGTMQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSITDPGLNGA 331

Query: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360
           ILQI+SHGFIGAALFFLAGTSYDRIRLVYLDEMGG+AI +PKIFT FSILSMASLALPGM
Sbjct: 332 ILQIVSHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAISMPKIFTMFSILSMASLALPGM 391

Query: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420
           SGFVAELIVFFGIITSQKY LM KILIT VMAIG+ILTPIY LSM RQMFYGYKL  AQN
Sbjct: 392 SGFVAELIVFFGIITSQKYFLMAKILITFVMAIGMILTPIYSLSMSRQMFYGYKLINAQN 451

Query: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 470
             FFDSGPRELFV+ISIL+PVIGIGIYPDF+ SLS DKVE ILSNYF R
Sbjct: 452 FSFFDSGPRELFVSISILLPVIGIGIYPDFLLSLSSDKVEAILSNYFNR 500

[Close]

BLAST of HG10017393.1 vs. ExPASy TrEMBL
Match: A0A2I6C0D3 (NADH dehydrogenase subunit 4 OS=Lagenaria siceraria OX=3668 GN=ndhD PE=3 SV=1)

HSP 1 Score: 908.3 bits (2346), Expect = 1.3e-260
Identity = 469/469 (100.00%), Postives = 469/469 (100.00%), Query Frame = 0


Query: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60
           MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL
Sbjct: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60

Query: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120
           LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL
Sbjct: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120

Query: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180
           LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI
Sbjct: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180

Query: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240
           LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH
Sbjct: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240

Query: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300
           AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA
Sbjct: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300

Query: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360
           ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM
Sbjct: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360

Query: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420
           SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN
Sbjct: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420

Query: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 470
           SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR
Sbjct: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 469

[Close]

BLAST of HG10017393.1 vs. ExPASy TrEMBL
Match: A0A7G9IT88 (NADH-plastoquinone oxidoreductase subunit 4 OS=Lagenaria siceraria var. microcarpa OX=2726058 GN=ndhD PE=3 SV=1)

HSP 1 Score: 908.3 bits (2346), Expect = 1.3e-260
Identity = 469/469 (100.00%), Postives = 469/469 (100.00%), Query Frame = 0


Query: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60
           MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL
Sbjct: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60

Query: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120
           LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL
Sbjct: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120

Query: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180
           LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI
Sbjct: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180

Query: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240
           LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH
Sbjct: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240

Query: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300
           AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA
Sbjct: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300

Query: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360
           ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM
Sbjct: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360

Query: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420
           SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN
Sbjct: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420

Query: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 470
           SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR
Sbjct: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 469

[Close]

BLAST of HG10017393.1 vs. ExPASy TrEMBL
Match: A0A7T3QNQ2 (NADH-plastoquinone oxidoreductase subunit 4 OS=Benincasa hispida OX=102211 GN=ndhD PE=4 SV=1)

HSP 1 Score: 901.7 bits (2329), Expect = 1.3e-258
Identity = 465/469 (99.15%), Postives = 466/469 (99.36%), Query Frame = 0


Query: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60
           MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL
Sbjct: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60

Query: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120
           LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL
Sbjct: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120

Query: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180
           LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI
Sbjct: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180

Query: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240
           LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH
Sbjct: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240

Query: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300
           AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA
Sbjct: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300

Query: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360
           ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM
Sbjct: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360

Query: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420
           SGFVAELIVFFGIITSQKYL MTKILITLVMAIG+ILTPIYLLSMLRQMFYGYKLF AQN
Sbjct: 361 SGFVAELIVFFGIITSQKYLFMTKILITLVMAIGMILTPIYLLSMLRQMFYGYKLFNAQN 420

Query: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 470
           SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVE ILSNYFAR
Sbjct: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVEAILSNYFAR 469

[Close]

BLAST of HG10017393.1 vs. ExPASy TrEMBL
Match: A0A6H0ESW4 (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Trichosanthes tricuspidata OX=654837 GN=ndhD PE=3 SV=1)

HSP 1 Score: 901.4 bits (2328), Expect = 1.6e-258
Identity = 465/469 (99.15%), Postives = 466/469 (99.36%), Query Frame = 0


Query: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60
           MRWYTICICVLELLLTTYAFCYHFELDDPLIQL EDYKWIPFLDFYWRLGIDGLSIGPIL
Sbjct: 38  MRWYTICICVLELLLTTYAFCYHFELDDPLIQLTEDYKWIPFLDFYWRLGIDGLSIGPIL 97

Query: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120
           LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL
Sbjct: 98  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 157

Query: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180
           LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI
Sbjct: 158 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 217

Query: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240
           LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH
Sbjct: 218 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 277

Query: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300
           AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA
Sbjct: 278 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 337

Query: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360
           ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGG+AIPIPKIFTTFSILSMASLALPGM
Sbjct: 338 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAIPIPKIFTTFSILSMASLALPGM 397

Query: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420
           SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLF AQN
Sbjct: 398 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFNAQN 457

Query: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 470
           SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVE ILSNYFAR
Sbjct: 458 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVEAILSNYFAR 506

[Close]

BLAST of HG10017393.1 vs. ExPASy TrEMBL
Match: A0A6H0EU46 (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Trichosanthes nervifolia OX=1144448 GN=ndhD PE=3 SV=1)

HSP 1 Score: 901.4 bits (2328), Expect = 1.6e-258
Identity = 465/469 (99.15%), Postives = 466/469 (99.36%), Query Frame = 0


Query: 1   MRWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPIL 60
           MRWYTICICVLELLLTTYAFCYHFELDDPLIQL EDYKWIPFLDFYWRLGIDGLSIGPIL
Sbjct: 38  MRWYTICICVLELLLTTYAFCYHFELDDPLIQLTEDYKWIPFLDFYWRLGIDGLSIGPIL 97

Query: 61  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 120
           LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL
Sbjct: 98  LTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLL 157

Query: 121 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 180
           LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI
Sbjct: 158 LSMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEI 217

Query: 181 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 240
           LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH
Sbjct: 218 LFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPH 277

Query: 241 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 300
           AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA
Sbjct: 278 AHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGA 337

Query: 301 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGM 360
           ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGG+AIPIPKIFTTFSILSMASLALPGM
Sbjct: 338 ILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAIPIPKIFTTFSILSMASLALPGM 397

Query: 361 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQN 420
           SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLF AQN
Sbjct: 398 SGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFNAQN 457

Query: 421 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYFAR 470
           SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVE ILSNYFAR
Sbjct: 458 SYFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVEAILSNYFAR 506

[Close]

BLAST of HG10017393.1 vs. TAIR 10
Match: ATCG01050.1 (NADH-Ubiquinone/plastoquinone (complex I) protein )

HSP 1 Score: 805.4 bits (2079), Expect = 2.3e-233
Identity = 409/466 (87.77%), Postives = 437/466 (93.78%), Query Frame = 0


Query: 2   RWYTICICVLELLLTTYAFCYHFELDDPLIQLMEDYKWIPFLDFYWRLGIDGLSIGPILL 61
           +WYTICIC+LELLLTTYAFCY+F++DDPLIQL EDYKWI F DFYWR+GIDGLSIG ILL
Sbjct: 39  KWYTICICILELLLTTYAFCYNFKMDDPLIQLSEDYKWIDFFDFYWRMGIDGLSIGTILL 98

Query: 62  TGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGSFSARDLLLFFIMWELELIPVYLLL 121
           TGFITTLATLAA+PVTRDSR FHFLMLAMYSGQIGSFS+RDLLLFFIMWELELIPVYLLL
Sbjct: 99  TGFITTLATLAAFPVTRDSRFFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLL 158

Query: 122 SMWGGKKRLYSATKFILYTAGGSIFLLMGVLGIGLYGSNEPTLNFETSANQSYPIALEIL 181
           SMWGGKKRLYSATKFILYTAG SIFLL+GVLGI LYGSNEPTLN E  AN+SYP+ LEIL
Sbjct: 159 SMWGGKKRLYSATKFILYTAGSSIFLLIGVLGISLYGSNEPTLNLELLANKSYPVTLEIL 218

Query: 182 FYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHA 241
           FYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHA
Sbjct: 219 FYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHA 278

Query: 242 HSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDTGLNGAI 301
           HS+FSPWL++VG IQIIYAASTS GQRNLKKRIAYSSVSHMGFIIIGI SI+D GLNGAI
Sbjct: 279 HSMFSPWLLVVGTIQIIYAASTSPGQRNLKKRIAYSSVSHMGFIIIGISSITDPGLNGAI 338

Query: 302 LQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGMS 361
           LQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGG+AI IPKIFT F+ILSMASLALPGMS
Sbjct: 339 LQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAISIPKIFTMFTILSMASLALPGMS 398

Query: 362 GFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFYGYKLFKAQNS 421
           GF+AE IVFFGIITSQKY L++KI I  VMAIG+ILTPIYLLSMLRQMFYGYKL   +N 
Sbjct: 399 GFIAEFIVFFGIITSQKYFLISKIFIIFVMAIGMILTPIYLLSMLRQMFYGYKLINIKNF 458

Query: 422 YFFDSGPRELFVAISILIPVIGIGIYPDFVFSLSVDKVETILSNYF 468
            FFDSGPRELF++ISIL+P+IGIGIYPDFV SL+ DKVE+ILSNYF
Sbjct: 459 SFFDSGPRELFLSISILLPIIGIGIYPDFVLSLASDKVESILSNYF 504

[Close]

BLAST of HG10017393.1 vs. TAIR 10
Match: ATMG00580.1 (NADH dehydrogenase subunit 4 )

HSP 1 Score: 214.2 bits (544), Expect = 2.3e-55
Identity = 136/419 (32.46%), Postives = 231/419 (55.13%), Query Frame = 0


Query: 32  QLMEDYKWIPFLDFYWRLGIDGLSIGPILLTGFITTLATLAAWPVTRD-SRLFHFLMLAM 91
           Q +E  +W+P+ +  + LGIDG+S+  ++LT F+  +     W   R   + +    L  
Sbjct: 67  QFVESLRWLPYENINFYLGIDGISLFFVILTTFLIPICISVGWSGMRSYGKEYITAFLIR 126

Query: 92  YSGQIGSFSARDLLLFFIMWELELIPVYLLLSMWGGKKR-LYSATKFILYTAGGSIFLLM 151
               I  F   DLLLF++  E   IP+++++ +WG ++R + +A +F LYT  GS+F+L+
Sbjct: 127 EFLMIAVFRMLDLLLFYVFPESVPIPMFIIIGVWGSRQRKIKAAYQFFLYTLLGSLFMLL 186

Query: 152 GVLGIGLYGSNEPTLNFETSANQSYPIALEILFYIGFLIAFAVKSPIIPLHTWLPDTHGE 211
            +L I L+ +   T + + S    +    +I  +I    +FAVK P++P+H WLP+ H E
Sbjct: 187 AILLI-LFQTG--TTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVE 246

Query: 212 AHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLIIVGIIQIIYAASTSSGQRN 271
           A  +  ++LAGI LK G +G +R ++ + P A    +P++  +  I IIY + T+S Q +
Sbjct: 247 APTAGSVILAGIPLKFGTHGFLRFSIPMFPEATLCSTPFIYTLSAIAIIYTSLTTSRQID 306

Query: 272 LKKRIAYSSVSHMGFIIIGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVY 331
           LKK IAYSSV+HM  + IG+ S +  G+ G+IL ++SHG + +ALF   G  YDR +   
Sbjct: 307 LKKIIAYSSVAHMNLVTIGMFSPNIQGIGGSILPMLSHGLVPSALFLCVGVLYDRHKTRL 366

Query: 332 LDEMGGLAIPIPKIFTTFSILSMASLALPGMSGFVAELIVFFGIITSQKYLLMTKILITL 391
           +   GGL   +P + T F   ++A+++ PG S F+ E ++  G             L+  
Sbjct: 367 VRYYGGLVSTMPNLSTIFFSFTLANMSSPGTSSFIGEFLILVGAFQRNS-------LVAT 426

Query: 392 VMAIGIILTPIYLLSMLRQMFYGYKLFKAQNSYFFDSGPRELFVAISILIPVIGIGIYP 449
           + A+G+IL   Y L +  ++  G  L       F DS  RE+ + I  L+ ++ +G++P
Sbjct: 427 LAALGMILGAAYSLWLYNRVVSG-NLKPDFLHKFSDSNGREVSIFIPFLVGLVRMGVHP 474

[Close]

BLAST of HG10017393.1 vs. TAIR 10
Match: ATCG01010.1 (NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein )

HSP 1 Score: 69.7 bits (169), Expect = 7.0e-12
Identity = 104/406 (25.62%), Postives = 181/406 (44.58%), Query Frame = 0


Query: 53  GLSIGPI--LLTGFITTLATLAAWPVTRDSRLFH---FLMLAMYSG-----QIGSFSARD 112
           G  I P+  +++  ITT+  L    +  D+ + H   +L    Y G      +G  ++ +
Sbjct: 86  GYFIDPLTSIMSILITTVGILVL--IYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSN 145

Query: 113 LLLFFIMWELELIPVYLLLSMWGGKKRLYSA-TKFILYTAGGSIFLLMGVLGI-GLYGSN 172
           L+  +  WEL  +  YLL+  W  +    +A  K  +    G   LL+G+LG+  + GS 
Sbjct: 146 LIQVYFFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWITGSF 205

Query: 173 EPTLNFETSANQSYPIALEILF--YIGFLIAFA--VKSPIIPLHTWLPDTHGEAHYSTCM 232
           E    FE   N      + +LF     FL+      KS   PLH WLPD        + +
Sbjct: 206 EFQDLFEIFNNLILNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISAL 265

Query: 233 LLAGILLKMGAYGLVRINMELLPHAHSIFSPWLII--VGIIQIIYAASTSSGQRNLKKRI 292
           + A  ++  G + + R    LLP    I S   II  +GII ++  A+ +  Q+++K+ +
Sbjct: 266 IHAATMVAAGIFLVAR----LLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGL 325

Query: 293 AYSSVSHMGFIIIGIGSISDTGLNGAILQIISHGFIGAALFF-----------LAGTSYD 352
           AYS++S +G++++ +G  S      A+  +I+H +  A LF            + G S D
Sbjct: 326 AYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPD 385

Query: 353 RIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPGMSGFVAELIVFFGIITSQKYLLMT 412
           + + + L  MGGL   +P   T F I +++   +P ++ F            S+  +L  
Sbjct: 386 KSQNMIL--MGGLTKHVPITKTAFLIGTLSLCGIPPLACF-----------WSKDEILND 445

Query: 413 KILITLVMAIGII----LTPIYLLSMLRQMFYGYKLFKAQNSYFFD 426
            +L + + AI       LT  Y+  +    F G+      N+YF +
Sbjct: 446 SLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEGH-----LNTYFLN 464

[Close]

BLAST of HG10017393.1 vs. TAIR 10
Match: ATMG00285.1 (NADH dehydrogenase 2A )

HSP 1 Score: 64.3 bits (155), Expect = 3.0e-10
Identity = 77/356 (21.63%), Postives = 147/356 (41.29%), Query Frame = 0


Query: 83  FHFLMLAMY--SGQIGSFSARDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT 142
           F F++L      G +   SA DL+  ++  E + +  Y++ +         S  K    T
Sbjct: 123 FEFIVLIPLPTRGMLFMISAHDLIAMYLAIEPQSLCFYVIAA---------SKRKSEFST 182

Query: 143 AGGSIFLLMGVLGIG--------LYGSNEPT---------LNFETSANQSYPIALEILFY 202
             GS +L++G    G        +YGS   T           +E +  +S  I + IL  
Sbjct: 183 EAGSKYLILGAFSSGILLFGCSMIYGSTGATHFDQLAKILTGYEITGARSSGIFMGIL-- 242

Query: 203 IGFLIAFAVKSPIIPLHTWLPDTH-GEAHYSTCML-------LAGILLKMGAYGLVRINM 262
               + F  K   +P H W PD + G     T  L       ++  +L++  YG     +
Sbjct: 243 -SIAVGFLFKITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISISANILRVSIYGSYGATL 302

Query: 263 ELLPHAHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDT 322
           + +               I  +I  A  +  Q  +K+ +A+SS+ H+G+I  G    +  
Sbjct: 303 QQI----------FFFCSIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIE 362

Query: 323 GLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASL 382
           G+   ++ I  +  +    F +  ++  + R+ Y+ ++G LA   P    TFSI   +  
Sbjct: 363 GIQSLLIGIFIYALMTMDAFAIV-SALRQTRVKYIADLGALAKTNPISAITFSITMFSYA 422

Query: 383 ALPGMSGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFY 412
            +P ++GF ++  +FF  +    Y L    ++T V+         Y + ++++MF+
Sbjct: 423 GIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIG------RFYYIRLVKRMFF 449

[Close]

BLAST of HG10017393.1 vs. TAIR 10
Match: ATMG01320.1 (NADH dehydrogenase 2B )

HSP 1 Score: 64.3 bits (155), Expect = 3.0e-10
Identity = 77/356 (21.63%), Postives = 147/356 (41.29%), Query Frame = 0


Query: 83  FHFLMLAMY--SGQIGSFSARDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT 142
           F F++L      G +   SA DL+  ++  E + +  Y++ +         S  K    T
Sbjct: 123 FEFIVLIPLPTRGMLFMISAHDLIAMYLAIEPQSLCFYVIAA---------SKRKSEFST 182

Query: 143 AGGSIFLLMGVLGIG--------LYGSNEPT---------LNFETSANQSYPIALEILFY 202
             GS +L++G    G        +YGS   T           +E +  +S  I + IL  
Sbjct: 183 EAGSKYLILGAFSSGILLFGCSMIYGSTGATHFDQLAKILTGYEITGARSSGIFMGIL-- 242

Query: 203 IGFLIAFAVKSPIIPLHTWLPDTH-GEAHYSTCML-------LAGILLKMGAYGLVRINM 262
               + F  K   +P H W PD + G     T  L       ++  +L++  YG     +
Sbjct: 243 -SIAVGFLFKITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISISANILRVSIYGSYGATL 302

Query: 263 ELLPHAHSIFSPWLIIVGIIQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSISDT 322
           + +               I  +I  A  +  Q  +K+ +A+SS+ H+G+I  G    +  
Sbjct: 303 QQI----------FFFCSIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIE 362

Query: 323 GLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASL 382
           G+   ++ I  +  +    F +  ++  + R+ Y+ ++G LA   P    TFSI   +  
Sbjct: 363 GIQSLLIGIFIYALMTMDAFAIV-SALRQTRVKYIADLGALAKTNPISAITFSITMFSYA 422

Query: 383 ALPGMSGFVAELIVFFGIITSQKYLLMTKILITLVMAIGIILTPIYLLSMLRQMFY 412
            +P ++GF ++  +FF  +    Y L    ++T V+         Y + ++++MF+
Sbjct: 423 GIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIG------RFYYIRLVKRMFF 449

The following BLAST results are available for this feature:

BLAST of HG10017393.1 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009456197.1	2.8e-260	100.00	NADH dehydrogenase subunit 4 [Lagenaria siceraria] >AUJ21962.1 NADH dehydrogenas...	[more]
QZL38645.1	8.9e-259	99.36	NADH dehydrogenase subunit D [Citrullus naudinianus]	[more]
QSQ72361.1	2.6e-258	99.15	NADH dehydrogenase subunit D [Benincasa hispida]	[more]
YP_010131148.1	2.6e-258	99.15	NADH-plastoquinone oxidoreductase subunit 4 [Benincasa hispida] >QPZ75796.1 NADH...	[more]
YP_009752461.1	3.4e-258	99.15	NADH dehydrogenase subunit D [Trichosanthes tricuspidata] >YP_009753754.1 NADH d...	[more]

BLAST of HG10017393.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZL8	1.1e-259	98.51	NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Cucumis sativus OX=3659...	[more]
Q0ZIW8	3.8e-244	91.68	NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Vitis vinifera OX=29760...	[more]
A0ZZ85	7.1e-243	91.26	NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Gossypium barbadense OX...	[more]
Q2L955	7.1e-243	91.26	NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Gossypium hirsutum OX=3...	[more]
B1A984	2.7e-242	91.04	NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Carica papaya OX=3649 G...	[more]

BLAST of HG10017393.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2I6C0D3	1.3e-260	100.00	NADH dehydrogenase subunit 4 OS=Lagenaria siceraria OX=3668 GN=ndhD PE=3 SV=1	[more]
A0A7G9IT88	1.3e-260	100.00	NADH-plastoquinone oxidoreductase subunit 4 OS=Lagenaria siceraria var. microcar...	[more]
A0A7T3QNQ2	1.3e-258	99.15	NADH-plastoquinone oxidoreductase subunit 4 OS=Benincasa hispida OX=102211 GN=nd...	[more]
A0A6H0ESW4	1.6e-258	99.15	NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Trichosanthes tricuspid...	[more]
A0A6H0EU46	1.6e-258	99.15	NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Trichosanthes nervifoli...	[more]

BLAST of HG10017393.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01050.1	2.3e-233	87.77	NADH-Ubiquinone/plastoquinone (complex I) protein	[more]
ATMG00580.1	2.3e-55	32.46	NADH dehydrogenase subunit 4	[more]
ATCG01010.1	7.0e-12	25.62	NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein	[more]
ATMG00285.1	3.0e-10	21.63	NADH dehydrogenase 2A	[more]
ATMG01320.1	3.0e-10	21.63	NADH dehydrogenase 2B	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003918	NADH:ubiquinone oxidoreductase	PRINTS	PR01437	NUOXDRDTASE4	coord: 106..125 score: 43.59 coord: 136..160 score: 33.69 coord: 348..374 score: 30.38 coord: 208..232 score: 51.79 coord: 296..315 score: 43.69
IPR003918	NADH:ubiquinone oxidoreductase	PANTHER	PTHR43507	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4	coord: 1..464
IPR010227	NADH-quinone oxidoreductase, chain M/4	TIGRFAM	TIGR01972	TIGR01972	coord: 2..464 e-value: 1.8E-144 score: 480.0
IPR001750	NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit	PFAM	PF00361	Proton_antipo_M	coord: 100..388 e-value: 7.7E-59 score: 199.3
None	No IPR available	PANTHER	PTHR43507:SF12	NAD(P)H-QUINONE OXIDOREDUCTASE CHAIN 4, CHLOROPLASTIC	coord: 1..464

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10017393	HG10017393	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10017393.1-cds	HG10017393.1-cds-Chr03:13970917..13972326	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10017393.1	HG10017393.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042773	ATP synthesis coupled electron transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding