HG10013566.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCGTCAAGGCGCTTATTCCAATGCTGGCTACTGCAGCAATGGTGAGAAGAAGAGTACGAGCCAGGTTCAACAGTTAGGTAATGCGATCTTCCATGATTTTCTTGGCATTAAGACCAAAGATGCTTCCGTACTCTTGGCCGCGAAGACGCCGGATGTAAGCTTCTCGGAGGCATCGACGCCGCCGTCGGCTTTGGCTTCTTCCAGTGGTGGCCGTGGACTCCTCTCCGCTGCCTCCGATCTTGCTTCTGGTCTGTTTGTTAACAGTCGTTGTCTTGAATTTGCATTTTTCTAGGTTATTTAGTATTTATCTGGCTTTTATTTTAATGATTTTGTTGAATTGCTTCTCCTTTTGGCCTGAATGACTTCCAATTTTTTTGGTTTTCCTTTTGTTTTGACGAATATTCCGATCATTATACTTCTTCTGATGGTTTTTCGATCCTCATTGAGCGTGATTGTTCATTTTTTGTTACATTCTTTGATTAGGTAGCTTTTGATTATAAAATATTGATTTTCATGTGTGAACTCGTCTTTTCTGTATAAAGTTGACTTCCGTGGTTTTATTCAATTTTTCTTCCTGCAACGTAGAATTTCTGTCTGCAACCCTCTTTCCCTTTGCTCTTTATATCACTGTAAAGTGTAAAGGATTGGTGTCTTTGAGGTCACCATTGGTTAGAAGCTTTCTGAAAGACCTCTTTTCCATTTGACTATCTCTTTTCTTTCAGTTTTTTAAAACTATGTGCAATTCTGAAATAGAAACTACAATTATTTTTTTCTAGAATCTTCCTTTCCCATTGTTAATTTCTTCCTACTCAGGCTAGAAATCTCATTCGGCTTGTATATTTTTCCTTGAACTGAGTGTTGTGACGTGCATGTTTTATTTTGATTTATCTATGAAGTTGGAACTGAACTTACTGATGTATGTGGTTTTGAATCCTTACCGTGGCTGTTTGCTATCAAGCGTGTCATATGTCTGATTTGAGCATTGAAGTCTTATTTGACGTAAAATTTACTCTGTTCTTTCTTCACTTTTGATAGAAAACCAGGTTGGACATTACCTTGAAGGGGTTCCATTCTACAGTCCAAGGAATGATATATCTGGACCTGAAAATGGTAACCGAATAGCAGGGATTAAGCGCAGTAATCCAGATTCTGCTTTCATGGGGTCATATAGAAACCAAATTCCTCATGTAAGCCTCTGACTCTCTTGAGAGTCATATGCAGTGAAGGTTTTGACAGCTTTTAATTTCTTTAGTCATATCCACATGGAAGTGAAAAGGACTTTAGTGGGTAATTTGATATAATTTTCTTTAATCTTCTATCAGATACTACAAAATGGAGCTAGTGGAGATCGACCAAGATACAATGATAATGAGACGGTGTACAGTATGCAGCCACCAAGAATTGCTTCTTCTTCCCTCACACAACATTCACTTGGCACTAGATTTAATCCTAGTGTTTCCAAATGGGAGAGACCTATTCTGTCGAACATGAGTTCTGCACCAAATTCTCCACTCGGGAGTCAGTTCGTGCCTCGTGTTCATCAAGTAGCTTCCAATTCTTCCAGAGAATTTAATGTTGCTCCTCCCAGTATTTCTCAGTCTGCTGCTGATGAAGGGTCTAGAACTGGGAAGAAAAGCCCTGGACTTTTAAGTAGCTTTAATGCTGGACATGATGGGAGACACTCATCTCAAATGTTGCTAAGTTGTGACAAGCAGAAAACCAACACTGAAGGTGTAGCATACAAATCTTCTAACCCTCCAAGGTAAATTCCAGACCGCTCATCATTTTCATTTTCATTTGTCCTACAACAATTTATCATCTTGTTTGATTGCCACTTAGTTTTTGAAAACTGTGCTTTTTTTTTAACAATTTTTTACAAATGTTTTCATCTTTCTCAAGTAAACATTTGCATTTTTAATAAATTTCCAAAAGCAAATACATGTTTTTTAAAACCTGATTTTGAAAATATTTGTAAAAATTAGATAACAAAACAAAGAAACTAATAAGTGGGAGTAGTTGATAGTGTCTAAAACTTGATTTTAAAAACCAAATGGTTATCAAACGGGGTCTTAAGAGTGTTGTGTGTTTAAATCTATTGTGACAGTCAACCGGGTCTCGATTCTAACAACAGACAGATGACTATTTTCTATGGTGGTCAAGCTCATGTTTTTGATGATGTCCATCCAAACAAGGTATTTTCTCCTATATGGCAAATGCTTCATTTGAAACCACTAGATTCATAAGTATTCATTATACTATTTTCATTTTTGCTTGTACTTTTGAACTGATAAGCTCACCATTCATGCTTCAAAAAGATTTATCAACTTTGGCTATAAAGATTTATCGACTTTGGCTATAAAGATTTATCGACTTTGGCTATGATAAAAGTTTGAATCAAATGGACAGTTGTGAATATACTATCCAGCAAACTTACCGAGACTTAGCTATGATAAAATTTTGAATCGAATGAGTTAATGACACCTTTTAATTACAAGTCAAGATGCATGTATAAACTTTGTTCCATGTCTTTGTTCGAAAATATTTCGTTTTGGAGTTAGTATATTGAGCAGCTGACCAAGCTTTAGAATGAAGAATTATGTATGCATGTTTAATCTCCTAAATGAAGATGTTTTAGTTAAAATTTTGGGACTTCACTCATGTTGAAATTCTGTTTTTTGTTAATTATCCATTAATCTCAGTAGTAGCTGCTGGATATTTTTCAGGCTGATATTATAATGGCCTTAGCTGGATCAAATGGGGGCTCTTGGTCAACAACCTTAGGACCTAAATTAAATGTAACTGGAATACCTAGTGACCAGGAATCAGCTAAAGATTATCATGGAAAGTTATATCATAGTTTGATATCCACCACTCGTGGACTTGGCGATACTCCTATCTTGACGCAAGCAGGTGATTCTAACTTAAAGAAGATTGGATTAACTAATTAAGTATGATTAACAAAAAAATATATTAGTATATTTGGTCTCGGACTTTTGCAGCTATCAGGTTTTCAAGACTCAAGAGTAAGATTTTACTTTGTTAAAAGTTGTTTCCAAGTTTGCTGATGCAATCTTTCCTTTTAATGCCTTTTATACATTATAATTGACAAACCAAAGCCAACATTCTGTCTATAGCTGTAGGTGATCATCCACGCAGCATTGCAGCGAAAGAGACCCGAGAACTTGTTCGTGCAGCAGATCCCAATGCTGAACAGTGA ATGGCTCGTCAAGGCGCTTATTCCAATGCTGGCTACTGCAGCAATGGTGAGAAGAAGAGTACGAGCCAGGTTCAACAGTTAGGTAATGCGATCTTCCATGATTTTCTTGGCATTAAGACCAAAGATGCTTCCGTACTCTTGGCCGCGAAGACGCCGGATGTAAGCTTCTCGGAGGCATCGACGCCGCCGTCGGCTTTGGCTTCTTCCAGTGGTGGCCGTGGACTCCTCTCCGCTGCCTCCGATCTTGCTTCTGAAAACCAGGTTGGACATTACCTTGAAGGGGTTCCATTCTACAGTCCAAGGAATGATATATCTGGACCTGAAAATGGTAACCGAATAGCAGGGATTAAGCGCAGTAATCCAGATTCTGCTTTCATGGGGTCATATAGAAACCAAATTCCTCATATACTACAAAATGGAGCTAGTGGAGATCGACCAAGATACAATGATAATGAGACGGTGTACAGTATGCAGCCACCAAGAATTGCTTCTTCTTCCCTCACACAACATTCACTTGGCACTAGATTTAATCCTAGTGTTTCCAAATGGGAGAGACCTATTCTGTCGAACATGAGTTCTGCACCAAATTCTCCACTCGGGAGTCAGTTCGTGCCTCGTGTTCATCAAGTAGCTTCCAATTCTTCCAGAGAATTTAATGTTGCTCCTCCCAGTATTTCTCAGTCTGCTGCTGATGAAGGGTCTAGAACTGGGAAGAAAAGCCCTGGACTTTTAAGTAGCTTTAATGCTGGACATGATGGGAGACACTCATCTCAAATGTTGCTAAGTTGTGACAAGCAGAAAACCAACACTGAAGGTGTAGCATACAAATCTTCTAACCCTCCAAGTCAACCGGGTCTCGATTCTAACAACAGACAGATGACTATTTTCTATGGTGGTCAAGCTCATGTTTTTGATGATGTCCATCCAAACAAGGCTGATATTATAATGGCCTTAGCTGGATCAAATGGGGGCTCTTGGTCAACAACCTTAGGACCTAAATTAAATGTAACTGGAATACCTAGTGACCAGGAATCAGCTAAAGATTATCATGGAAAGTTATATCATAGTTTGATATCCACCACTCGTGGACTTGGCGATACTCCTATCTTGACGCAAGCAGCTGTAGGTGATCATCCACGCAGCATTGCAGCGAAAGAGACCCGAGAACTTGTTCGTGCAGCAGATCCCAATGCTGAACAGTGA ATGGCTCGTCAAGGCGCTTATTCCAATGCTGGCTACTGCAGCAATGGTGAGAAGAAGAGTACGAGCCAGGTTCAACAGTTAGGTAATGCGATCTTCCATGATTTTCTTGGCATTAAGACCAAAGATGCTTCCGTACTCTTGGCCGCGAAGACGCCGGATGTAAGCTTCTCGGAGGCATCGACGCCGCCGTCGGCTTTGGCTTCTTCCAGTGGTGGCCGTGGACTCCTCTCCGCTGCCTCCGATCTTGCTTCTGAAAACCAGGTTGGACATTACCTTGAAGGGGTTCCATTCTACAGTCCAAGGAATGATATATCTGGACCTGAAAATGGTAACCGAATAGCAGGGATTAAGCGCAGTAATCCAGATTCTGCTTTCATGGGGTCATATAGAAACCAAATTCCTCATATACTACAAAATGGAGCTAGTGGAGATCGACCAAGATACAATGATAATGAGACGGTGTACAGTATGCAGCCACCAAGAATTGCTTCTTCTTCCCTCACACAACATTCACTTGGCACTAGATTTAATCCTAGTGTTTCCAAATGGGAGAGACCTATTCTGTCGAACATGAGTTCTGCACCAAATTCTCCACTCGGGAGTCAGTTCGTGCCTCGTGTTCATCAAGTAGCTTCCAATTCTTCCAGAGAATTTAATGTTGCTCCTCCCAGTATTTCTCAGTCTGCTGCTGATGAAGGGTCTAGAACTGGGAAGAAAAGCCCTGGACTTTTAAGTAGCTTTAATGCTGGACATGATGGGAGACACTCATCTCAAATGTTGCTAAGTTGTGACAAGCAGAAAACCAACACTGAAGGTGTAGCATACAAATCTTCTAACCCTCCAAGTCAACCGGGTCTCGATTCTAACAACAGACAGATGACTATTTTCTATGGTGGTCAAGCTCATGTTTTTGATGATGTCCATCCAAACAAGGCTGATATTATAATGGCCTTAGCTGGATCAAATGGGGGCTCTTGGTCAACAACCTTAGGACCTAAATTAAATGTAACTGGAATACCTAGTGACCAGGAATCAGCTAAAGATTATCATGGAAAGTTATATCATAGTTTGATATCCACCACTCGTGGACTTGGCGATACTCCTATCTTGACGCAAGCAGCTGTAGGTGATCATCCACGCAGCATTGCAGCGAAAGAGACCCGAGAACTTGTTCGTGCAGCAGATCCCAATGCTGAACAGTGA MARQGAYSNAGYCSNGEKKSTSQVQQLGNAIFHDFLGIKTKDASVLLAAKTPDVSFSEASTPPSALASSSGGRGLLSAASDLASENQVGHYLEGVPFYSPRNDISGPENGNRIAGIKRSNPDSAFMGSYRNQIPHILQNGASGDRPRYNDNETVYSMQPPRIASSSLTQHSLGTRFNPSVSKWERPILSNMSSAPNSPLGSQFVPRVHQVASNSSREFNVAPPSISQSAADEGSRTGKKSPGLLSSFNAGHDGRHSSQMLLSCDKQKTNTEGVAYKSSNPPSQPGLDSNNRQMTIFYGGQAHVFDDVHPNKADIIMALAGSNGGSWSTTLGPKLNVTGIPSDQESAKDYHGKLYHSLISTTRGLGDTPILTQAAVGDHPRSIAAKETRELVRAADPNAEQ Homology
BLAST of HG10013566.1 vs. NCBI nr
Match: XP_038899259.1 (protein TIFY 8-like [Benincasa hispida] >XP_038899260.1 protein TIFY 8-like [Benincasa hispida]) HSP 1 Score: 714.5 bits (1843), Expect = 5.0e-202 Identity = 361/400 (90.25%), Postives = 377/400 (94.25%), Query Frame = 0
BLAST of HG10013566.1 vs. NCBI nr
Match: XP_004136338.1 (protein TIFY 8 isoform X1 [Cucumis sativus]) HSP 1 Score: 705.3 bits (1819), Expect = 3.0e-199 Identity = 360/400 (90.00%), Postives = 375/400 (93.75%), Query Frame = 0
BLAST of HG10013566.1 vs. NCBI nr
Match: KAA0038794.1 (protein TIFY 8-like isoform X1 [Cucumis melo var. makuwa] >TYK31415.1 protein TIFY 8-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 700.7 bits (1807), Expect = 7.5e-198 Identity = 359/400 (89.75%), Postives = 372/400 (93.00%), Query Frame = 0
BLAST of HG10013566.1 vs. NCBI nr
Match: XP_008466376.1 (PREDICTED: protein TIFY 8-like isoform X1 [Cucumis melo]) HSP 1 Score: 700.7 bits (1807), Expect = 7.5e-198 Identity = 359/400 (89.75%), Postives = 372/400 (93.00%), Query Frame = 0
BLAST of HG10013566.1 vs. NCBI nr
Match: XP_011652493.1 (protein TIFY 8 isoform X2 [Cucumis sativus]) HSP 1 Score: 697.6 bits (1799), Expect = 6.3e-197 Identity = 358/400 (89.50%), Postives = 373/400 (93.25%), Query Frame = 0
BLAST of HG10013566.1 vs. ExPASy Swiss-Prot
Match: Q84MB2 (Protein TIFY 8 OS=Arabidopsis thaliana OX=3702 GN=TIFY8 PE=1 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.7e-40 Identity = 121/311 (38.91%), Postives = 163/311 (52.41%), Query Frame = 0
BLAST of HG10013566.1 vs. ExPASy TrEMBL
Match: A0A0A0LJC4 (Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G878900 PE=3 SV=1) HSP 1 Score: 705.3 bits (1819), Expect = 1.5e-199 Identity = 360/400 (90.00%), Postives = 375/400 (93.75%), Query Frame = 0
BLAST of HG10013566.1 vs. ExPASy TrEMBL
Match: A0A5D3E7X9 (Protein TIFY 8-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007240 PE=3 SV=1) HSP 1 Score: 700.7 bits (1807), Expect = 3.6e-198 Identity = 359/400 (89.75%), Postives = 372/400 (93.00%), Query Frame = 0
BLAST of HG10013566.1 vs. ExPASy TrEMBL
Match: A0A1S3CR31 (protein TIFY 8-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503802 PE=3 SV=1) HSP 1 Score: 700.7 bits (1807), Expect = 3.6e-198 Identity = 359/400 (89.75%), Postives = 372/400 (93.00%), Query Frame = 0
BLAST of HG10013566.1 vs. ExPASy TrEMBL
Match: A0A1S3CRA0 (protein TIFY 8-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503802 PE=3 SV=1) HSP 1 Score: 693.0 bits (1787), Expect = 7.5e-196 Identity = 357/400 (89.25%), Postives = 370/400 (92.50%), Query Frame = 0
BLAST of HG10013566.1 vs. ExPASy TrEMBL
Match: A0A1S3CSF5 (protein TIFY 8-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103503802 PE=3 SV=1) HSP 1 Score: 662.1 bits (1707), Expect = 1.4e-186 Identity = 338/372 (90.86%), Postives = 348/372 (93.55%), Query Frame = 0
BLAST of HG10013566.1 vs. TAIR 10
Match: AT4G32570.1 (TIFY domain protein 8 ) HSP 1 Score: 168.3 bits (425), Expect = 1.2e-41 Identity = 121/311 (38.91%), Postives = 163/311 (52.41%), Query Frame = 0
BLAST of HG10013566.1 vs. TAIR 10
Match: AT1G70700.1 (TIFY domain/Divergent CCT motif family protein ) HSP 1 Score: 43.5 bits (101), Expect = 4.6e-04 Identity = 29/87 (33.33%), Postives = 42/87 (48.28%), Query Frame = 0
BLAST of HG10013566.1 vs. TAIR 10
Match: AT3G17860.1 (jasmonate-zim-domain protein 3 ) HSP 1 Score: 42.7 bits (99), Expect = 7.9e-04 Identity = 25/56 (44.64%), Postives = 28/56 (50.00%), Query Frame = 0
BLAST of HG10013566.1 vs. TAIR 10
Match: AT3G17860.2 (jasmonate-zim-domain protein 3 ) HSP 1 Score: 42.7 bits (99), Expect = 7.9e-04 Identity = 25/56 (44.64%), Postives = 28/56 (50.00%), Query Frame = 0
BLAST of HG10013566.1 vs. TAIR 10
Match: AT3G17860.3 (jasmonate-zim-domain protein 3 ) HSP 1 Score: 42.7 bits (99), Expect = 7.9e-04 Identity = 25/56 (44.64%), Postives = 28/56 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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