HG10013361.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTTGGGGAAGAGGTCACGTGCTCCGATGAGAAAAACGCCGAGCATGACGGAGATCACCTTCGATCTGGGTGGCTCCGCCGGTGAACAATTGCCGCCTTCGCTCGGTTATCCGACAAACAACCAAAAATCAGGGTACCAACAAATGATATCTCCAAGAAATTACAGAAGGCATTCGGTTGATCTACAAGAGAACGCTAATTTCCTCAGAGCTTGTTCTCTTTGCTCTCGCCCCCTCGTTCCTGGTCGAGATATTTACATGTACAGGTAAATCAATTTCAATCTAATTTAATCCAATAATCCCAAAATTTATATTCTATTTATGATTTTCTTTTCCTGTGGGTATTGAGTTTTGTAATGAAACTGAAGGGGACTCTGTTTTTAGGGGGGACAGGGGATTTTGTAGCGACGAATGTAGGCAAAAGCAAATGAAGCAAGATGAGAGAATGGAGAAGTGCAGTTTAGCAACAAAGAAAGCAGCAGCGGCGGCGGCGGCGGCCGCAGCTGTGGCGGTGGTTTCTACATCGGCCGCCGTTACATCTCAGATCTCCGGCAAGGGAGAAACAGTAGCTGCTTCATAG ATGTCTTTGGGGAAGAGGTCACGTGCTCCGATGAGAAAAACGCCGAGCATGACGGAGATCACCTTCGATCTGGGTGGCTCCGCCGGTGAACAATTGCCGCCTTCGCTCGGTTATCCGACAAACAACCAAAAATCAGGGTACCAACAAATGATATCTCCAAGAAATTACAGAAGGCATTCGGTTGATCTACAAGAGAACGCTAATTTCCTCAGAGCTTGTTCTCTTTGCTCTCGCCCCCTCGTTCCTGGTCGAGATATTTACATGTACAGGGGGGACAGGGGATTTTGTAGCGACGAATGTAGGCAAAAGCAAATGAAGCAAGATGAGAGAATGGAGAAGTGCAGTTTAGCAACAAAGAAAGCAGCAGCGGCGGCGGCGGCGGCCGCAGCTGTGGCGGTGGTTTCTACATCGGCCGCCGTTACATCTCAGATCTCCGGCAAGGGAGAAACAGTAGCTGCTTCATAG ATGTCTTTGGGGAAGAGGTCACGTGCTCCGATGAGAAAAACGCCGAGCATGACGGAGATCACCTTCGATCTGGGTGGCTCCGCCGGTGAACAATTGCCGCCTTCGCTCGGTTATCCGACAAACAACCAAAAATCAGGGTACCAACAAATGATATCTCCAAGAAATTACAGAAGGCATTCGGTTGATCTACAAGAGAACGCTAATTTCCTCAGAGCTTGTTCTCTTTGCTCTCGCCCCCTCGTTCCTGGTCGAGATATTTACATGTACAGGGGGGACAGGGGATTTTGTAGCGACGAATGTAGGCAAAAGCAAATGAAGCAAGATGAGAGAATGGAGAAGTGCAGTTTAGCAACAAAGAAAGCAGCAGCGGCGGCGGCGGCGGCCGCAGCTGTGGCGGTGGTTTCTACATCGGCCGCCGTTACATCTCAGATCTCCGGCAAGGGAGAAACAGTAGCTGCTTCATAG MSLGKRSRAPMRKTPSMTEITFDLGGSAGEQLPPSLGYPTNNQKSGYQQMISPRNYRRHSVDLQENANFLRACSLCSRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERMEKCSLATKKAAAAAAAAAAVAVVSTSAAVTSQISGKGETVAAS Homology
BLAST of HG10013361.1 vs. NCBI nr
Match: XP_038898979.1 (FCS-Like Zinc finger 6-like [Benincasa hispida]) HSP 1 Score: 272.3 bits (695), Expect = 2.5e-69 Identity = 144/156 (92.31%), Postives = 149/156 (95.51%), Query Frame = 0
BLAST of HG10013361.1 vs. NCBI nr
Match: XP_008444103.1 (PREDICTED: uncharacterized protein LOC103487542 [Cucumis melo]) HSP 1 Score: 255.0 bits (650), Expect = 4.2e-64 Identity = 138/156 (88.46%), Postives = 141/156 (90.38%), Query Frame = 0
BLAST of HG10013361.1 vs. NCBI nr
Match: XP_004150522.1 (FCS-Like Zinc finger 6 [Cucumis sativus] >KGN54618.1 hypothetical protein Csa_012886 [Cucumis sativus]) HSP 1 Score: 253.8 bits (647), Expect = 9.3e-64 Identity = 137/156 (87.82%), Postives = 140/156 (89.74%), Query Frame = 0
BLAST of HG10013361.1 vs. NCBI nr
Match: XP_022975921.1 (uncharacterized protein LOC111476480 [Cucurbita maxima]) HSP 1 Score: 236.9 bits (603), Expect = 1.2e-58 Identity = 130/155 (83.87%), Postives = 139/155 (89.68%), Query Frame = 0
BLAST of HG10013361.1 vs. NCBI nr
Match: KAG7024632.1 (hypothetical protein SDJN02_13450 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 232.3 bits (591), Expect = 2.9e-57 Identity = 132/158 (83.54%), Postives = 141/158 (89.24%), Query Frame = 0
BLAST of HG10013361.1 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.0e-21 Identity = 72/162 (44.44%), Postives = 90/162 (55.56%), Query Frame = 0
BLAST of HG10013361.1 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.4e-17 Identity = 66/149 (44.30%), Postives = 79/149 (53.02%), Query Frame = 0
BLAST of HG10013361.1 vs. ExPASy Swiss-Prot
Match: F4JW68 (FCS-Like Zinc finger 7 OS=Arabidopsis thaliana OX=3702 GN=FLZ7 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 8.3e-15 Identity = 46/114 (40.35%), Postives = 66/114 (57.89%), Query Frame = 0
BLAST of HG10013361.1 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 8.6e-12 Identity = 46/120 (38.33%), Postives = 61/120 (50.83%), Query Frame = 0
BLAST of HG10013361.1 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.1e-10 Identity = 37/80 (46.25%), Postives = 51/80 (63.75%), Query Frame = 0
BLAST of HG10013361.1 vs. ExPASy TrEMBL
Match: A0A1S3B9M7 (uncharacterized protein LOC103487542 OS=Cucumis melo OX=3656 GN=LOC103487542 PE=3 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 2.0e-64 Identity = 138/156 (88.46%), Postives = 141/156 (90.38%), Query Frame = 0
BLAST of HG10013361.1 vs. ExPASy TrEMBL
Match: A0A0A0KYN7 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G378780 PE=3 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 4.5e-64 Identity = 137/156 (87.82%), Postives = 140/156 (89.74%), Query Frame = 0
BLAST of HG10013361.1 vs. ExPASy TrEMBL
Match: A0A6J1IFI1 (uncharacterized protein LOC111476480 OS=Cucurbita maxima OX=3661 GN=LOC111476480 PE=3 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 5.7e-59 Identity = 130/155 (83.87%), Postives = 139/155 (89.68%), Query Frame = 0
BLAST of HG10013361.1 vs. ExPASy TrEMBL
Match: A0A5D3DC40 (Senescence-associated family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45680G00010 PE=3 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 1.0e-55 Identity = 123/140 (87.86%), Postives = 125/140 (89.29%), Query Frame = 0
BLAST of HG10013361.1 vs. ExPASy TrEMBL
Match: A0A6J1FAL0 (uncharacterized protein LOC111443579 OS=Cucurbita moschata OX=3662 GN=LOC111443579 PE=3 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 1.0e-55 Identity = 127/156 (81.41%), Postives = 136/156 (87.18%), Query Frame = 0
BLAST of HG10013361.1 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 103.6 bits (257), Expect = 1.4e-22 Identity = 72/162 (44.44%), Postives = 90/162 (55.56%), Query Frame = 0
BLAST of HG10013361.1 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 90.9 bits (224), Expect = 9.7e-19 Identity = 66/149 (44.30%), Postives = 79/149 (53.02%), Query Frame = 0
BLAST of HG10013361.1 vs. TAIR 10
Match: AT4G39795.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 81.6 bits (200), Expect = 5.9e-16 Identity = 46/114 (40.35%), Postives = 66/114 (57.89%), Query Frame = 0
BLAST of HG10013361.1 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 71.6 bits (174), Expect = 6.1e-13 Identity = 46/120 (38.33%), Postives = 61/120 (50.83%), Query Frame = 0
BLAST of HG10013361.1 vs. TAIR 10
Match: AT5G47060.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-11 Identity = 37/80 (46.25%), Postives = 51/80 (63.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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