HG10012043.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012043.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NAC domain-containing protein
Location	Chr01: 16876571 .. 16878029 (-)
Sequence length	585
RNA-Seq Expression	HG10012043.1
Synteny	HG10012043.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAAAACTTTGGTTTTCTATAGAAATAGAGCTCCAAATGGGATCAAAACTGGATGGATTATGCATGAATTTAGGCTTGAGGCCCCTCATAGGCCCCCAAAGGTTGAATTTTTTATCTTTTTTTTTTTTTTTTTTCCTAATTATCTATATTTTAGACTATTTAGACATAAATTCCATGGTGTGAGCACATGCACACAATAAAAAATGGTTTTTTTTTTAATAATTTAATTTGGAAATATTTATATTCATGCATGTGCCCTTAAAGGATAACAACACAAAAGTTGGTGTCTTTTTCCACTTTGGTCATATTCACTTACATAGAGAAGGAGAGAGATCTCAATTTAATGAATCTTTCTTGGTTTAGAAATAGTTGCATTAACAGAGAATACATATAATTAACAATATAAATATAAATATACTATTATTATAATGTGCTTTGTTTTGTTTTTGTAAAACAGAAATTGAGAATCAAAATAATTATGAATGGTATTATTTAAAGTAATGGTACAAAGAAAAGTGAATATAATTTGGAATTATCTCTCTCTTTTTTTTCTTTTTTTTTTCAGTTATATAATTGTTTTTATGCAATACATTTGCTACTTTTGTGTTACATTCCATTGACAAACAAAAATTTCATCACTTAGTCTTTATTTCTTAATATTGTCATTTTCTATTCCTTCCAAGTTTGAAACTTTTCCTTTTCTTTTTTAATGTGCATTTCATTAGAATGTAGTTAGTTAATTACTTAATCTTAATTTTTATTATTAATCATCATTTCTCTCTTTAAGAATGCTATATTCAATTAGGACTTTTCAATGTTGTACTTAAAGTTATTCCTTTTTTCCTTCAAACCACCTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTGACAATATAATTCAAGAGTCACATTTTTACATGTTCTTATGCATTGATTTAACAAGAAAATGAACCAAAACTTTTATGTGGGTACAGGAGGATTGGGTTTTGTGTAGAGTGTTTCAAAAGGGGAAACAAGAAGAGTACAACACCAAACTGATCAACCAACATTTTACATTTGGAAACTTCGAGCGCGTTCCATCTGTCGTCATCCGAGCTGATCCATCTCCCCCTTTAAGTGACCCGAGCCAAACCACCACGATGCCTTGTGGCTACAATGTCGATATTGATATCGCTTCATTATCGTCCTCAATGACTCCTCATCACCAGATCACCCATACCCACACAGGCAGCTGTTCTTTTCTCCATCTCCTTCAACTTCCACAAGAGAAAGATGCCAATAATAATAATCATAATAATCCCAAAACTGATCAACTTTTCTGCCCCAAAAATAATGACTCTGATTATGGGGTTTTGTGGGATATGGATTTAGAAGAACATACCTTTCAAGATGGCGTCGGATCGAACTTGGATCAAATGGCATTCGACGTCGATAGCAGCTTGGTTTTCCTCTGA

mRNA sequence

ATGAGAAAAACTTTGGTTTTCTATAGAAATAGAGCTCCAAATGGGATCAAAACTGGATGGATTATGCATGAATTTAGGCTTGAGGCCCCTCATAGGCCCCCAAAGGAGGATTGGGTTTTGTGTAGAGTGTTTCAAAAGGGGAAACAAGAAGAGTACAACACCAAACTGATCAACCAACATTTTACATTTGGAAACTTCGAGCGCGTTCCATCTGTCGTCATCCGAGCTGATCCATCTCCCCCTTTAAGTGACCCGAGCCAAACCACCACGATGCCTTGTGGCTACAATGTCGATATTGATATCGCTTCATTATCGTCCTCAATGACTCCTCATCACCAGATCACCCATACCCACACAGGCAGCTGTTCTTTTCTCCATCTCCTTCAACTTCCACAAGAGAAAGATGCCAATAATAATAATCATAATAATCCCAAAACTGATCAACTTTTCTGCCCCAAAAATAATGACTCTGATTATGGGGTTTTGTGGGATATGGATTTAGAAGAACATACCTTTCAAGATGGCGTCGGATCGAACTTGGATCAAATGGCATTCGACGTCGATAGCAGCTTGGTTTTCCTCTGA

Coding sequence (CDS)

ATGAGAAAAACTTTGGTTTTCTATAGAAATAGAGCTCCAAATGGGATCAAAACTGGATGGATTATGCATGAATTTAGGCTTGAGGCCCCTCATAGGCCCCCAAAGGAGGATTGGGTTTTGTGTAGAGTGTTTCAAAAGGGGAAACAAGAAGAGTACAACACCAAACTGATCAACCAACATTTTACATTTGGAAACTTCGAGCGCGTTCCATCTGTCGTCATCCGAGCTGATCCATCTCCCCCTTTAAGTGACCCGAGCCAAACCACCACGATGCCTTGTGGCTACAATGTCGATATTGATATCGCTTCATTATCGTCCTCAATGACTCCTCATCACCAGATCACCCATACCCACACAGGCAGCTGTTCTTTTCTCCATCTCCTTCAACTTCCACAAGAGAAAGATGCCAATAATAATAATCATAATAATCCCAAAACTGATCAACTTTTCTGCCCCAAAAATAATGACTCTGATTATGGGGTTTTGTGGGATATGGATTTAGAAGAACATACCTTTCAAGATGGCGTCGGATCGAACTTGGATCAAATGGCATTCGACGTCGATAGCAGCTTGGTTTTCCTCTGA

Protein sequence

MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQHFTFGNFERVPSVVIRADPSPPLSDPSQTTTMPCGYNVDIDIASLSSSMTPHHQITHTHTGSCSFLHLLQLPQEKDANNNNHNNPKTDQLFCPKNNDSDYGVLWDMDLEEHTFQDGVGSNLDQMAFDVDSSLVFL

Homology

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BLAST of HG10012043.1 vs. NCBI nr
Match: XP_038888767.1 (NAC domain-containing protein 21/22-like [Benincasa hispida])

HSP 1 Score: 359.4 bits (921), Expect = 2.0e-95
Identity = 175/194 (90.21%), Postives = 185/194 (95.36%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH 60
           MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLI+QH
Sbjct: 111 MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLIDQH 170

Query: 61  FTFGNFERVPSVVIRADPSPPLSDPSQTTTMPCGYNVDIDIASLSSSMTPHHQITHTHTG 120
           FTFGNFERVPSVVIRA PSPP +DPSQTT MPCGYNVDIDIASLSSS+ P HQI+H+HTG
Sbjct: 171 FTFGNFERVPSVVIRA-PSPPPTDPSQTTVMPCGYNVDIDIASLSSSIAP-HQISHSHTG 230

Query: 121 SCSFLHLLQLPQEKDANNNNHNNPKTDQLFCPKNNDSDYGVLWDMDLEEHTFQDGVGSNL 180
           +CSFLHLLQLPQEK+ +NNN NN KTDQLFCPKNN+SDYGVLWDMDLEEHTFQDGVGSNL
Sbjct: 231 NCSFLHLLQLPQEKNDDNNN-NNLKTDQLFCPKNNESDYGVLWDMDLEEHTFQDGVGSNL 290

Query: 181 DQMAFDVDSSLVFL 195
           DQMAFD +SSLVFL
Sbjct: 291 DQMAFDDNSSLVFL 301

[Close]

BLAST of HG10012043.1 vs. NCBI nr
Match: XP_004152054.1 (protein CUP-SHAPED COTYLEDON 3 [Cucumis sativus] >KGN57897.1 hypothetical protein Csa_010961 [Cucumis sativus])

HSP 1 Score: 352.4 bits (903), Expect = 2.4e-93
Identity = 173/195 (88.72%), Postives = 180/195 (92.31%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH 60
           MRKTLVFY+NRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH
Sbjct: 111 MRKTLVFYKNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH 170

Query: 61  FTFGNFERVPSVVIRADPSPPLSDPSQTTTMPCGYNVDIDIASLSSSMTPHHQITHTHTG 120
           FTFGNFERVPSV+IRA PSP  SDPSQTTTMPCGYNVDIDI SLS SM P     H+HTG
Sbjct: 171 FTFGNFERVPSVIIRA-PSPLPSDPSQTTTMPCGYNVDIDITSLSPSMAP-----HSHTG 230

Query: 121 SCSFLHLLQLPQEKDANNNNHNNPKTDQLFCPKNNDSDYGVLWDMDLEEHTFQDGVGSNL 180
           SCSFLHLLQLP++KD NNNN NNPKTDQ+FCPKNN+SDYG LWDMDLEEHTFQDGVGSNL
Sbjct: 231 SCSFLHLLQLPRDKDDNNNN-NNPKTDQIFCPKNNESDYGALWDMDLEEHTFQDGVGSNL 290

Query: 181 DQMAF-DVDSSLVFL 195
           DQMAF DVDSSLVFL
Sbjct: 291 DQMAFDDVDSSLVFL 298

[Close]

BLAST of HG10012043.1 vs. NCBI nr
Match: XP_008447414.1 (PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis melo])

HSP 1 Score: 347.1 bits (889), Expect = 1.0e-91
Identity = 173/203 (85.22%), Postives = 180/203 (88.67%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH 60
           MRKTLVFY+NRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH
Sbjct: 111 MRKTLVFYKNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH 170

Query: 61  FTFGNFERVPSVVIRADPSPPLSDPSQTTTMPCGYNVDIDIASLSSSMTPHHQITHTHTG 120
           FTFGNFERVPSV +RA PSP  SDPSQTTTMP GYNVDIDI SLS SM P     H+HTG
Sbjct: 171 FTFGNFERVPSVFVRA-PSPLPSDPSQTTTMPSGYNVDIDITSLSPSMAP-----HSHTG 230

Query: 121 SCSFLHLLQLPQEKD--------ANNNNHNNPKTDQLFCPKNNDSDYGVLWDMDLEEHTF 180
           SCSFLHLLQLP++KD         NNNN+NNPKTDQ+FCPKNNDSDYGVLWDMDLEEHTF
Sbjct: 231 SCSFLHLLQLPRDKDDNNSNNNNNNNNNNNNPKTDQIFCPKNNDSDYGVLWDMDLEEHTF 290

Query: 181 QDGVGSNLDQMAF-DVDSSLVFL 195
           QDGVGSNLDQMAF DVDSSLVFL
Sbjct: 291 QDGVGSNLDQMAFDDVDSSLVFL 307

[Close]

BLAST of HG10012043.1 vs. NCBI nr
Match: XP_023554678.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.8 bits (800), Expect = 2.1e-81
Identity = 159/195 (81.54%), Postives = 171/195 (87.69%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH 60
           M+KTLVFYRNRAPNGIKTGWIMHEFRLEAPHR PKEDWVLCRVFQKGKQE+YN KL NQH
Sbjct: 111 MKKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRLPKEDWVLCRVFQKGKQEDYNNKL-NQH 170

Query: 61  FTFGNFERVPSVVIRADPSPPLSDPSQTTTMPCGYNVDIDIASLSSSMTPHHQITHTHTG 120
           FTFGNFE VPSV++RA PSPP SDPS+ T MP  YNVDIDIASLSSS+ P  QI+H+HTG
Sbjct: 171 FTFGNFEHVPSVLVRA-PSPPPSDPSK-TVMPSSYNVDIDIASLSSSIAP-EQISHSHTG 230

Query: 121 SCSFLHLL-QLPQEKDANNNNHNNPKTDQLFCPKNNDSDYGVLWDMDLEEHTFQDGVGSN 180
           SCSFLHLL QLPQEK       NNPKTDQLFCPKNN+SDYGV+W+MDLEEHTF+DGV SN
Sbjct: 231 SCSFLHLLQQLPQEK-----QDNNPKTDQLFCPKNNESDYGVMWEMDLEEHTFRDGVVSN 290

Query: 181 LDQMAFDVDSSLVFL 195
           LDQM FDVDSS VFL
Sbjct: 291 LDQMEFDVDSSQVFL 296

[Close]

BLAST of HG10012043.1 vs. NCBI nr
Match: KAG6571530.1 (Protein CUP-SHAPED COTYLEDON 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011274.1 Protein CUP-SHAPED COTYLEDON 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.5 bits (794), Expect = 1.1e-80
Identity = 158/195 (81.03%), Postives = 170/195 (87.18%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH 60
           M+KTLVFYRNRAPNGIKTGWIMHEFRLEAPHR PKEDWVLCRVFQKGKQE+YN KL NQH
Sbjct: 111 MKKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRLPKEDWVLCRVFQKGKQEDYNNKL-NQH 170

Query: 61  FTFGNFERVPSVVIRADPSPPLSDPSQTTTMPCGYNVDIDIASLSSSMTPHHQITHTHTG 120
           FTFGNFE VPSV++RA PSPP SDPS+ T MP  YNVDIDIASLSSS+ P  QI+H+HTG
Sbjct: 171 FTFGNFEHVPSVLVRA-PSPPPSDPSK-TVMPSSYNVDIDIASLSSSIAP-EQISHSHTG 230

Query: 121 SCSFLHLL-QLPQEKDANNNNHNNPKTDQLFCPKNNDSDYGVLWDMDLEEHTFQDGVGSN 180
           SCSFLHLL QLPQEK       NNPKTDQLFCPK N+SDYGV+W+MDLEEHTF+DGV SN
Sbjct: 231 SCSFLHLLQQLPQEK-----QDNNPKTDQLFCPKTNESDYGVMWEMDLEEHTFRDGVVSN 290

Query: 181 LDQMAFDVDSSLVFL 195
           LDQM FDVDSS VFL
Sbjct: 291 LDQMEFDVDSSQVFL 296

[Close]

BLAST of HG10012043.1 vs. ExPASy Swiss-Prot
Match: Q84TE6 (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana OX=3702 GN=NAC021 PE=1 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 1.8e-14
Identity = 59/163 (36.20%), Postives = 75/163 (46.01%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRP-------PKEDWVLCRVFQKGKQEEYN 60
           MRKTLVFY+ RAP G KT W+MHEFRL+  H P       PKEDWVLCRVF K      N
Sbjct: 119 MRKTLVFYQGRAPRGRKTDWVMHEFRLQGSHHPPNHSLSSPKEDWVLCRVFHK------N 178

Query: 61  TKLINQHFTFGN-FERVPSVVIRADPSPPLSDPSQTTTMPCGYNVDIDIASLSSSMTPHH 120
           T+ +      G+ F+   S  +     PPL DP           ++ D    S     HH
Sbjct: 179 TEGVICRDNMGSCFDETASASL-----PPLMDP----------YINFDQEPSSYLSDDHH 238

Query: 121 QITHTHTGSCSFLHLLQLPQEKDANNNNHNNPKTDQLFCPKNN 156
            I + H    S      L Q +  N+N  N+    ++ C   N
Sbjct: 239 YIINEHVPCFS-----NLSQNQTLNSNLTNSVSELKIPCKNPN 255

[Close]

BLAST of HG10012043.1 vs. ExPASy Swiss-Prot
Match: F4HYV5 (NAC domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=NAC026 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.2e-14
Identity = 58/169 (34.32%), Postives = 82/169 (48.52%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHR--PPKEDWVLCRVFQK------GKQEEY 60
           MRKTLVFY+ RAPNG K+ WIMHE+RLE      P +E WV+CRVF+K       K  +Y
Sbjct: 109 MRKTLVFYKGRAPNGQKSDWIMHEYRLETSENGTPQEEGWVVCRVFKKKLAATVRKMGDY 168

Query: 61  NTKLINQHFTFGNFERVPSVVIRADPSPPLSD-----PSQTTTMPCGYNV---------- 120
           ++   +QH+       + S +I + P   L +          T+PCG N           
Sbjct: 169 HSS-PSQHWYDDQLSFMASEIISSSPRQFLPNHHYNRHHHQQTLPCGLNAFNNNNPNLQC 228

Query: 121 DIDIASLSSSMTPHHQITHTHTGSCSFLHLLQLPQ-EKDANNNNHNNPK 146
             ++    + M  H Q  H H     FL L QL     + N++N+NN +
Sbjct: 229 KQELELHYNQMVQHQQQNH-HLRESMFLQLPQLESPTSNCNSDNNNNTR 275

[Close]

BLAST of HG10012043.1 vs. ExPASy Swiss-Prot
Match: Q9FK44 (NAC domain-containing protein 87 OS=Arabidopsis thaliana OX=3702 GN=NAC087 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.3e-12
Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPH------RPPKEDWVLCRVFQKGKQE---E 60
           M+KTLVFYR RAP G KT W+MHE+RLE  +      +  +++WV+CRVF K       +
Sbjct: 121 MKKTLVFYRGRAPKGEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQ 180

Query: 61  YNTKLINQHFT-FGNFERVPSVVIRADPSPPLSDPS--QTTTMPCGYNVDIDIASLSSSM 120
             T++  + FT   + E +   ++     PPL DPS    T  P    ++     +SS +
Sbjct: 181 PMTRIPVEDFTRMDSLENIDH-LLDFSSLPPLIDPSFMSQTEQPNFKPINPPTYDISSPI 240

Query: 121 TPHHQITHTHTGSCSFLHLLQLPQEKDANNNNHNNPKTDQ 149
            PH    H ++    F H +         NNN+   K +Q
Sbjct: 241 QPH----HFNSYQSIFNHQVFGSASGSTYNNNNEMIKMEQ 275

[Close]

BLAST of HG10012043.1 vs. ExPASy Swiss-Prot
Match: O65508 (NAC domain-containing protein 76 OS=Arabidopsis thaliana OX=3702 GN=NAC076 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-11
Identity = 31/48 (64.58%), Postives = 37/48 (77.08%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHR--PPKEDWVLCRVFQK 47
           MRKTLVFY+ RAPNG KT WIMHE+RLE+     P +E WV+CR F+K
Sbjct: 112 MRKTLVFYKGRAPNGQKTDWIMHEYRLESDENAPPQEEGWVVCRAFKK 159

[Close]

BLAST of HG10012043.1 vs. ExPASy Swiss-Prot
Match: Q9FWX2 (NAC domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=NAC007 PE=1 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-11
Identity = 31/48 (64.58%), Postives = 37/48 (77.08%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHR--PPKEDWVLCRVFQK 47
           MRKTLVFY+ RAPNG K+ WIMHE+RLE      P +E WV+CRVF+K
Sbjct: 109 MRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKK 156

[Close]

BLAST of HG10012043.1 vs. ExPASy TrEMBL
Match: A0A0A0LB56 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G379740 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.2e-93
Identity = 173/195 (88.72%), Postives = 180/195 (92.31%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH 60
           MRKTLVFY+NRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH
Sbjct: 111 MRKTLVFYKNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH 170

Query: 61  FTFGNFERVPSVVIRADPSPPLSDPSQTTTMPCGYNVDIDIASLSSSMTPHHQITHTHTG 120
           FTFGNFERVPSV+IRA PSP  SDPSQTTTMPCGYNVDIDI SLS SM P     H+HTG
Sbjct: 171 FTFGNFERVPSVIIRA-PSPLPSDPSQTTTMPCGYNVDIDITSLSPSMAP-----HSHTG 230

Query: 121 SCSFLHLLQLPQEKDANNNNHNNPKTDQLFCPKNNDSDYGVLWDMDLEEHTFQDGVGSNL 180
           SCSFLHLLQLP++KD NNNN NNPKTDQ+FCPKNN+SDYG LWDMDLEEHTFQDGVGSNL
Sbjct: 231 SCSFLHLLQLPRDKDDNNNN-NNPKTDQIFCPKNNESDYGALWDMDLEEHTFQDGVGSNL 290

Query: 181 DQMAF-DVDSSLVFL 195
           DQMAF DVDSSLVFL
Sbjct: 291 DQMAFDDVDSSLVFL 298

[Close]

BLAST of HG10012043.1 vs. ExPASy TrEMBL
Match: A0A1S3BIA3 (protein CUP-SHAPED COTYLEDON 3-like OS=Cucumis melo OX=3656 GN=LOC103489866 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.9e-92
Identity = 173/203 (85.22%), Postives = 180/203 (88.67%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH 60
           MRKTLVFY+NRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH
Sbjct: 111 MRKTLVFYKNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH 170

Query: 61  FTFGNFERVPSVVIRADPSPPLSDPSQTTTMPCGYNVDIDIASLSSSMTPHHQITHTHTG 120
           FTFGNFERVPSV +RA PSP  SDPSQTTTMP GYNVDIDI SLS SM P     H+HTG
Sbjct: 171 FTFGNFERVPSVFVRA-PSPLPSDPSQTTTMPSGYNVDIDITSLSPSMAP-----HSHTG 230

Query: 121 SCSFLHLLQLPQEKD--------ANNNNHNNPKTDQLFCPKNNDSDYGVLWDMDLEEHTF 180
           SCSFLHLLQLP++KD         NNNN+NNPKTDQ+FCPKNNDSDYGVLWDMDLEEHTF
Sbjct: 231 SCSFLHLLQLPRDKDDNNSNNNNNNNNNNNNPKTDQIFCPKNNDSDYGVLWDMDLEEHTF 290

Query: 181 QDGVGSNLDQMAF-DVDSSLVFL 195
           QDGVGSNLDQMAF DVDSSLVFL
Sbjct: 291 QDGVGSNLDQMAFDDVDSSLVFL 307

[Close]

BLAST of HG10012043.1 vs. ExPASy TrEMBL
Match: A0A6J1HFI6 (NAC domain-containing protein 21/22-like OS=Cucurbita moschata OX=3662 GN=LOC111463835 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.5e-80
Identity = 157/195 (80.51%), Postives = 170/195 (87.18%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH 60
           M+KTLVFYRNRAPNGIKTGWIMHEFRLEAPHR PKEDWVLCRVFQKGKQE+YN KL NQH
Sbjct: 111 MKKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRLPKEDWVLCRVFQKGKQEDYNNKL-NQH 170

Query: 61  FTFGNFERVPSVVIRADPSPPLSDPSQTTTMPCGYNVDIDIASLSSSMTPHHQITHTHTG 120
           FTFGNFE VPSV+++A PSPP SDPS+ T MP  YNVDIDIASLSSS+ P  QI+H+HTG
Sbjct: 171 FTFGNFEHVPSVLVQA-PSPPPSDPSK-TVMPSSYNVDIDIASLSSSIAP-EQISHSHTG 230

Query: 121 SCSFLHLL-QLPQEKDANNNNHNNPKTDQLFCPKNNDSDYGVLWDMDLEEHTFQDGVGSN 180
           SCSFLHLL QLPQEK       NNPKTDQLFCPK N+SDYGV+W+MDLEEHTF+DGV SN
Sbjct: 231 SCSFLHLLQQLPQEK-----QDNNPKTDQLFCPKTNESDYGVMWEMDLEEHTFRDGVVSN 290

Query: 181 LDQMAFDVDSSLVFL 195
           LDQM FDVDSS VFL
Sbjct: 291 LDQMEFDVDSSQVFL 296

[Close]

BLAST of HG10012043.1 vs. ExPASy TrEMBL
Match: A0A6J1HWP7 (protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita maxima OX=3661 GN=LOC111466974 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.9e-80
Identity = 158/195 (81.03%), Postives = 170/195 (87.18%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH 60
           M+KTLVFYRNRAPNGIKTGWIMHEFRLEAPHR PKEDWVLCRVFQKGKQE+YN KL NQH
Sbjct: 111 MKKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRLPKEDWVLCRVFQKGKQEDYNNKL-NQH 170

Query: 61  FTFGNFERVPSVVIRADPSPPLSDPSQTTTMPCGYNVDIDIASLSSSMTPHHQITHTHTG 120
           FTF NFE VPSV++RA PSPP SDPS+ T MP GYNVDIDIASLSSS+ P  QI+H+HTG
Sbjct: 171 FTFRNFEHVPSVLVRA-PSPPPSDPSK-TVMPSGYNVDIDIASLSSSIAP-EQISHSHTG 230

Query: 121 SCSFLHLL-QLPQEKDANNNNHNNPKTDQLFCPKNNDSDYGVLWDMDLEEHTFQDGVGSN 180
           SCSFLHLL QLPQEK       NNPKTDQLFCPKNN+SDYGV+W+MDLEE TF+DGV SN
Sbjct: 231 SCSFLHLLQQLPQEK-----QDNNPKTDQLFCPKNNESDYGVMWEMDLEEQTFRDGVISN 290

Query: 181 LDQMAFDVDSSLVFL 195
           LDQM FDVDSS VFL
Sbjct: 291 LDQMEFDVDSSQVFL 296

[Close]

BLAST of HG10012043.1 vs. ExPASy TrEMBL
Match: A0A6J1DMY9 (protein CUP-SHAPED COTYLEDON 3 OS=Momordica charantia OX=3673 GN=LOC111022717 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.9e-75
Identity = 156/194 (80.41%), Postives = 167/194 (86.08%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEYNTKLINQH 60
           MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEE+NTKL +Q 
Sbjct: 111 MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEHNTKLSHQ- 170

Query: 61  FTFGNFERVPSVVIRADPSPPLSDPSQTTTMPCGYNVDIDIASLSSSMTPHHQITHTHTG 120
           +TF N ER PS VIRA PSPPL+D +Q T MPCGYNV  DIASLSS+ TPH   +H+HTG
Sbjct: 171 YTFENSERAPS-VIRA-PSPPLTDLNQ-TNMPCGYNV--DIASLSST-TPHQ--SHSHTG 230

Query: 121 SCSFLHLLQLPQEKDANNNNHNNPKTDQLFCPKNNDSDYGVLWDMDLEEHTFQDGVGSNL 180
           SCSFLHLLQ PQ++       +NPK DQLFCPK NDSDYGVLWDMDLEE TFQDGVGSNL
Sbjct: 231 SCSFLHLLQFPQDQ-----KDDNPKADQLFCPK-NDSDYGVLWDMDLEEQTFQDGVGSNL 289

Query: 181 DQMAFDVDSSLVFL 195
           DQMAFDVDSSLVFL
Sbjct: 291 DQMAFDVDSSLVFL 289

[Close]

BLAST of HG10012043.1 vs. TAIR 10
Match: AT4G28530.1 (NAC domain containing protein 74 )

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-20
Identity = 42/48 (87.50%), Postives = 44/48 (91.67%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRPPKEDWVLCRVFQKGK 49
           MRKTLVFYRNRAPNGIKT WIMHEFRLE P+ PPKEDWVLCRVF KG+
Sbjct: 127 MRKTLVFYRNRAPNGIKTTWIMHEFRLECPNIPPKEDWVLCRVFNKGR 174

[Close]

BLAST of HG10012043.1 vs. TAIR 10
Match: AT1G56010.1 (NAC domain containing protein 1 )

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-15
Identity = 59/163 (36.20%), Postives = 75/163 (46.01%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRP-------PKEDWVLCRVFQKGKQEEYN 60
           MRKTLVFY+ RAP G KT W+MHEFRL+  H P       PKEDWVLCRVF K      N
Sbjct: 52  MRKTLVFYQGRAPRGRKTDWVMHEFRLQGSHHPPNHSLSSPKEDWVLCRVFHK------N 111

Query: 61  TKLINQHFTFGN-FERVPSVVIRADPSPPLSDPSQTTTMPCGYNVDIDIASLSSSMTPHH 120
           T+ +      G+ F+   S  +     PPL DP           ++ D    S     HH
Sbjct: 112 TEGVICRDNMGSCFDETASASL-----PPLMDP----------YINFDQEPSSYLSDDHH 171

Query: 121 QITHTHTGSCSFLHLLQLPQEKDANNNNHNNPKTDQLFCPKNN 156
            I + H    S      L Q +  N+N  N+    ++ C   N
Sbjct: 172 YIINEHVPCFS-----NLSQNQTLNSNLTNSVSELKIPCKNPN 188

[Close]

BLAST of HG10012043.1 vs. TAIR 10
Match: AT1G56010.2 (NAC domain containing protein 1 )

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-15
Identity = 59/163 (36.20%), Postives = 75/163 (46.01%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRP-------PKEDWVLCRVFQKGKQEEYN 60
           MRKTLVFY+ RAP G KT W+MHEFRL+  H P       PKEDWVLCRVF K      N
Sbjct: 119 MRKTLVFYQGRAPRGRKTDWVMHEFRLQGSHHPPNHSLSSPKEDWVLCRVFHK------N 178

Query: 61  TKLINQHFTFGN-FERVPSVVIRADPSPPLSDPSQTTTMPCGYNVDIDIASLSSSMTPHH 120
           T+ +      G+ F+   S  +     PPL DP           ++ D    S     HH
Sbjct: 179 TEGVICRDNMGSCFDETASASL-----PPLMDP----------YINFDQEPSSYLSDDHH 238

Query: 121 QITHTHTGSCSFLHLLQLPQEKDANNNNHNNPKTDQLFCPKNN 156
            I + H    S      L Q +  N+N  N+    ++ C   N
Sbjct: 239 YIINEHVPCFS-----NLSQNQTLNSNLTNSVSELKIPCKNPN 255

[Close]

BLAST of HG10012043.1 vs. TAIR 10
Match: AT1G62700.1 (Arabidopsis NAC domain containing protein 26 )

HSP 1 Score: 79.3 bits (194), Expect = 3.7e-15
Identity = 58/169 (34.32%), Postives = 82/169 (48.52%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLEAPHR--PPKEDWVLCRVFQK------GKQEEY 60
           MRKTLVFY+ RAPNG K+ WIMHE+RLE      P +E WV+CRVF+K       K  +Y
Sbjct: 109 MRKTLVFYKGRAPNGQKSDWIMHEYRLETSENGTPQEEGWVVCRVFKKKLAATVRKMGDY 168

Query: 61  NTKLINQHFTFGNFERVPSVVIRADPSPPLSD-----PSQTTTMPCGYNV---------- 120
           ++   +QH+       + S +I + P   L +          T+PCG N           
Sbjct: 169 HSS-PSQHWYDDQLSFMASEIISSSPRQFLPNHHYNRHHHQQTLPCGLNAFNNNNPNLQC 228

Query: 121 DIDIASLSSSMTPHHQITHTHTGSCSFLHLLQLPQ-EKDANNNNHNNPK 146
             ++    + M  H Q  H H     FL L QL     + N++N+NN +
Sbjct: 229 KQELELHYNQMVQHQQQNH-HLRESMFLQLPQLESPTSNCNSDNNNNTR 275

[Close]

BLAST of HG10012043.1 vs. TAIR 10
Match: AT5G61430.1 (NAC domain containing protein 100 )

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-12
Identity = 45/106 (42.45%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 1   MRKTLVFYRNRAPNGIKTGWIMHEFRLE---APHRPP---KEDWVLCRVFQK--GKQEEY 60
           M+KTLVFYR RAP G KT W+MHE+RLE   + H  P   K +WV+CRVFQK  G ++  
Sbjct: 115 MKKTLVFYRGRAPKGQKTNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQKSAGGKKIP 174

Query: 61  NTKLINQHFTFGNFERVPSVVIRADPSPPLSDPSQT--TTMPCGYN 97
            + LI       +F   PS++     S P +D ++T    +PC  N
Sbjct: 175 ISSLIRIGSLGTDFN--PSLLPSLTDSSPYNDKTKTEPVYVPCFSN 218

The following BLAST results are available for this feature:

BLAST of HG10012043.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888767.1	2.0e-95	90.21	NAC domain-containing protein 21/22-like [Benincasa hispida]	[more]
XP_004152054.1	2.4e-93	88.72	protein CUP-SHAPED COTYLEDON 3 [Cucumis sativus] >KGN57897.1 hypothetical protei...	[more]
XP_008447414.1	1.0e-91	85.22	PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis melo]	[more]
XP_023554678.1	2.1e-81	81.54	protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo]	[more]
KAG6571530.1	1.1e-80	81.03	Protein CUP-SHAPED COTYLEDON 3, partial [Cucurbita argyrosperma subsp. sororia] ...	[more]

BLAST of HG10012043.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84TE6	1.8e-14	36.20	NAC domain-containing protein 21/22 OS=Arabidopsis thaliana OX=3702 GN=NAC021 PE...	[more]
F4HYV5	5.2e-14	34.32	NAC domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=NAC026 PE=1 ...	[more]
Q9FK44	6.3e-12	32.50	NAC domain-containing protein 87 OS=Arabidopsis thaliana OX=3702 GN=NAC087 PE=2 ...	[more]
O65508	1.8e-11	64.58	NAC domain-containing protein 76 OS=Arabidopsis thaliana OX=3702 GN=NAC076 PE=1 ...	[more]
Q9FWX2	2.4e-11	64.58	NAC domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=NAC007 PE=1 S...	[more]

BLAST of HG10012043.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LB56	1.2e-93	88.72	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G379740 PE=4 SV...	[more]
A0A1S3BIA3	4.9e-92	85.22	protein CUP-SHAPED COTYLEDON 3-like OS=Cucumis melo OX=3656 GN=LOC103489866 PE=4...	[more]
A0A6J1HFI6	1.5e-80	80.51	NAC domain-containing protein 21/22-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1HWP7	1.9e-80	81.03	protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita maxima OX=3661 GN=LOC111466974 ...	[more]
A0A6J1DMY9	1.9e-75	80.41	protein CUP-SHAPED COTYLEDON 3 OS=Momordica charantia OX=3673 GN=LOC111022717 PE...	[more]

BLAST of HG10012043.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28530.1	1.3e-20	87.50	NAC domain containing protein 74	[more]
AT1G56010.1	1.3e-15	36.20	NAC domain containing protein 1	[more]
AT1G56010.2	1.3e-15	36.20	NAC domain containing protein 1	[more]
AT1G62700.1	3.7e-15	34.32	Arabidopsis NAC domain containing protein 26	[more]
AT5G61430.1	1.7e-12	42.45	NAC domain containing protein 100	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 1..27 e-value: 8.8E-5 score: 23.4
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 1..46 score: 21.396917
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 1..51 e-value: 2.0E-15 score: 58.9
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 1..46
None	No IPR available	PANTHER	PTHR31744	PROTEIN CUP-SHAPED COTYLEDON 2-RELATED	coord: 1..192
None	No IPR available	PANTHER	PTHR31744:SF133	NAC TRANSCRIPTION FACTOR-LIKE PROTEIN	coord: 1..192

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10012043	HG10012043	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10012043.1-cds	HG10012043.1-cds-Chr01:16876571..16877050	CDS
HG10012043.1-cds	HG10012043.1-cds-Chr01:16877925..16878029	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10012043.1	HG10012043.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding