HG10012024.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012024.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING-H2 finger protein ATL16-like
Location	Chr01: 16674986 .. 16676044 (-)
Sequence length	1059
RNA-Seq Expression	HG10012024.1
Synteny	HG10012024.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACTAACCCAGAAAAACCTCCATAGCTTCGAGTCTCAAGCTTTTTTACCCATCAAAAACCAACAGGTTCCAACTTATCAGTCTCCTTTCTCTACTGTTTCAGATTCTGCTTCTCCTGTTTTAGCTGTTGCAGTTCTAAGTGTGATGGGCACAGCTTTCTTGTTATTGGGTTACTACATTTTCATCAGCAAATGCTGCTCTAACTGGCACCAGTTTAGTTTGCTGAGGAGGTTTTCAAGTTTTCATACCCAACAACATGAAGATCCTTTCATAGCTCTCTCTCCAACAACAATGTGGAATCGCGGTCTTGAAGAGTCGATGATTCGCCAAATCCCAGCTTTTCAATTCGAAAGAGACGGTGAAGGTAGCGGTATCTATGGCTGCGTGGTTTGTTTAAGCGAGTTTCAAGAGAACGAAATGCTAAGAGTTTTACCAAAATGCAGCCACACATTTCACTTGGACTGCATTGATATCTGGTTACAAAGCAACTCCAATTGCCCTCTTTGTAGAACAAGCATTTCAGGCATAACAAAGCTTCCAATTGATCAAATTGTAGCTCCAAGTTCTTCTCCTCAAAACTCACAGCTTCTTTCCAACAGCATAATGGGAAGTGATGAAGATTTTGTAGTCATTGAACTGGGAAGTGAAGATGAAGCAGTTTTCTCAGCAGGGCAACAAGAGGGTAATGCTTCAAGAGAAGTAGTATTTCAGCAGCCCAGATACCATTCTCCGAAAAAAACCGAGAACAAGGTCGGCAAACCGAAAACTCGAAAGTGTCACCATGTTTCGATCATGGGAGACGAGGGCATCGATGTTAGAGAAAAAGATGATCAATTCTTTACTCAACCCATCAGAAGATCCTTTTCCATGGATTCTGCAGCTGATCAGCAGCTCTACTTAACCGTTCAAATGATTATACATCAAGGTAGGCAAATCACTGAATCCAGTAGTAGTAGTAGTGCAGAAATTGACAGCAGAAACCGAAGATCTTTCTTCCCGTTCCGATCGGGACGAGGATGCAAAAATGCAATTCTTCCACTTGAGTCTGATATGTAA

mRNA sequence

ATGGAACTAACCCAGAAAAACCTCCATAGCTTCGAGTCTCAAGCTTTTTTACCCATCAAAAACCAACAGGTTCCAACTTATCAGTCTCCTTTCTCTACTGTTTCAGATTCTGCTTCTCCTGTTTTAGCTGTTGCAGTTCTAAGTGTGATGGGCACAGCTTTCTTGTTATTGGGTTACTACATTTTCATCAGCAAATGCTGCTCTAACTGGCACCAGTTTAGTTTGCTGAGGAGGTTTTCAAGTTTTCATACCCAACAACATGAAGATCCTTTCATAGCTCTCTCTCCAACAACAATGTGGAATCGCGGTCTTGAAGAGTCGATGATTCGCCAAATCCCAGCTTTTCAATTCGAAAGAGACGGTGAAGGTAGCGGTATCTATGGCTGCGTGGTTTGTTTAAGCGAGTTTCAAGAGAACGAAATGCTAAGAGTTTTACCAAAATGCAGCCACACATTTCACTTGGACTGCATTGATATCTGGTTACAAAGCAACTCCAATTGCCCTCTTTGTAGAACAAGCATTTCAGGCATAACAAAGCTTCCAATTGATCAAATTGTAGCTCCAAGTTCTTCTCCTCAAAACTCACAGCTTCTTTCCAACAGCATAATGGGAAGTGATGAAGATTTTGTAGTCATTGAACTGGGAAGTGAAGATGAAGCAGTTTTCTCAGCAGGGCAACAAGAGGGTAATGCTTCAAGAGAAGTAGTATTTCAGCAGCCCAGATACCATTCTCCGAAAAAAACCGAGAACAAGGTCGGCAAACCGAAAACTCGAAAGTGTCACCATGTTTCGATCATGGGAGACGAGGGCATCGATGTTAGAGAAAAAGATGATCAATTCTTTACTCAACCCATCAGAAGATCCTTTTCCATGGATTCTGCAGCTGATCAGCAGCTCTACTTAACCGTTCAAATGATTATACATCAAGGTAGGCAAATCACTGAATCCAGTAGTAGTAGTAGTGCAGAAATTGACAGCAGAAACCGAAGATCTTTCTTCCCGTTCCGATCGGGACGAGGATGCAAAAATGCAATTCTTCCACTTGAGTCTGATATGTAA

Coding sequence (CDS)

ATGGAACTAACCCAGAAAAACCTCCATAGCTTCGAGTCTCAAGCTTTTTTACCCATCAAAAACCAACAGGTTCCAACTTATCAGTCTCCTTTCTCTACTGTTTCAGATTCTGCTTCTCCTGTTTTAGCTGTTGCAGTTCTAAGTGTGATGGGCACAGCTTTCTTGTTATTGGGTTACTACATTTTCATCAGCAAATGCTGCTCTAACTGGCACCAGTTTAGTTTGCTGAGGAGGTTTTCAAGTTTTCATACCCAACAACATGAAGATCCTTTCATAGCTCTCTCTCCAACAACAATGTGGAATCGCGGTCTTGAAGAGTCGATGATTCGCCAAATCCCAGCTTTTCAATTCGAAAGAGACGGTGAAGGTAGCGGTATCTATGGCTGCGTGGTTTGTTTAAGCGAGTTTCAAGAGAACGAAATGCTAAGAGTTTTACCAAAATGCAGCCACACATTTCACTTGGACTGCATTGATATCTGGTTACAAAGCAACTCCAATTGCCCTCTTTGTAGAACAAGCATTTCAGGCATAACAAAGCTTCCAATTGATCAAATTGTAGCTCCAAGTTCTTCTCCTCAAAACTCACAGCTTCTTTCCAACAGCATAATGGGAAGTGATGAAGATTTTGTAGTCATTGAACTGGGAAGTGAAGATGAAGCAGTTTTCTCAGCAGGGCAACAAGAGGGTAATGCTTCAAGAGAAGTAGTATTTCAGCAGCCCAGATACCATTCTCCGAAAAAAACCGAGAACAAGGTCGGCAAACCGAAAACTCGAAAGTGTCACCATGTTTCGATCATGGGAGACGAGGGCATCGATGTTAGAGAAAAAGATGATCAATTCTTTACTCAACCCATCAGAAGATCCTTTTCCATGGATTCTGCAGCTGATCAGCAGCTCTACTTAACCGTTCAAATGATTATACATCAAGGTAGGCAAATCACTGAATCCAGTAGTAGTAGTAGTGCAGAAATTGACAGCAGAAACCGAAGATCTTTCTTCCCGTTCCGATCGGGACGAGGATGCAAAAATGCAATTCTTCCACTTGAGTCTGATATGTAA

Protein sequence

MELTQKNLHSFESQAFLPIKNQQVPTYQSPFSTVSDSASPVLAVAVLSVMGTAFLLLGYYIFISKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTTMWNRGLEESMIRQIPAFQFERDGEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGITKLPIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELGSEDEAVFSAGQQEGNASREVVFQQPRYHSPKKTENKVGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMDSAADQQLYLTVQMIIHQGRQITESSSSSSAEIDSRNRRSFFPFRSGRGCKNAILPLESDM

Homology

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BLAST of HG10012024.1 vs. NCBI nr
Match: XP_038889009.1 (RING-H2 finger protein ATL16-like [Benincasa hispida])

HSP 1 Score: 624.0 bits (1608), Expect = 7.8e-175
Identity = 318/342 (92.98%), Postives = 325/342 (95.03%), Query Frame = 0


Query: 1   MELTQKNLHSFESQAFLPIKNQQVPTYQSPFSTVSDSASPVLAVAVLSVMGTAFLLLGYY 60
           ME TQK+LHSFE QAFLPIKNQQ+P+YQSPFSTVSDS SPVLAVAVLSVMGTAFLLLGYY
Sbjct: 1   MEPTQKSLHSFEFQAFLPIKNQQIPSYQSPFSTVSDSTSPVLAVAVLSVMGTAFLLLGYY 60

Query: 61  IFISKCCSNWHQFSLLRRFSSFHT-QQHEDPFIALSPTTMWNRGLEESMIRQIPAFQFER 120
           IFISKCCSNWHQFSLLRRFSSFHT QQ EDPFIALSPTTMWNRGLEESMIRQIPAFQFER
Sbjct: 61  IFISKCCSNWHQFSLLRRFSSFHTPQQDEDPFIALSPTTMWNRGLEESMIRQIPAFQFER 120

Query: 121 DGEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGITK 180
           DGEGSGIY CVVCLS+F+ENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGITK
Sbjct: 121 DGEGSGIYSCVVCLSKFRENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGITK 180

Query: 181 LPIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELGSEDEAVFSAGQQEGNASREVVFQQ 240
            PIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELG EDE VFS GQ EGNASREV+ QQ
Sbjct: 181 PPIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELGREDEEVFSPGQHEGNASREVLVQQ 240

Query: 241 PRYHSPKKTENKVGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMDSAADQQL 300
           PRYHSPKK ENKVGKPKTRKCHHVSIMGDEGI+VR  DDQFFTQPIRRSFSMDSAADQQL
Sbjct: 241 PRYHSPKKLENKVGKPKTRKCHHVSIMGDEGINVRANDDQFFTQPIRRSFSMDSAADQQL 300

Query: 301 YLTVQMIIHQGRQITESSSS-SSAEIDSRNRRSFFPFRSGRG 341
           YLTVQMIIHQ RQITESSSS SSAEIDSRNRRSFFPFRSGRG
Sbjct: 301 YLTVQMIIHQDRQITESSSSGSSAEIDSRNRRSFFPFRSGRG 342

[Close]

BLAST of HG10012024.1 vs. NCBI nr
Match: XP_023533032.1 (RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 599.0 bits (1543), Expect = 2.7e-167
Identity = 301/352 (85.51%), Postives = 317/352 (90.06%), Query Frame = 0


Query: 1   MELTQKNLHSFESQAFLPIKNQQVPTYQSPFSTVSDSASPVLAVAVLSVMGTAFLLLGYY 60
           ME TQK+LH FES AF  +  QQ+ +Y SPFS+VSDSASP+LAVAVLSVMGT FLLLGYY
Sbjct: 1   MEPTQKSLHIFESPAFESLTKQQISSYHSPFSSVSDSASPILAVAVLSVMGTVFLLLGYY 60

Query: 61  IFISKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTTMWNRGLEESMIRQIPAFQFERD 120
           IFISKCCSNWH FSLLRRFSSFH+QQHEDPFIALSP TMWNRGLE+SMI QIP F+FE+D
Sbjct: 61  IFISKCCSNWHHFSLLRRFSSFHSQQHEDPFIALSP-TMWNRGLEQSMIGQIPTFRFEKD 120

Query: 121 GEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGITKL 180
            EGSG+YGCVVCLSEFQENEMLRVLPKCSHTFHLDCID+WLQSNSNCPLCRTSISG TK 
Sbjct: 121 DEGSGLYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDVWLQSNSNCPLCRTSISGTTKP 180

Query: 181 PIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELGSEDEAVFSAGQQEGNASREVVFQQP 240
           PID IVAPSSSPQNSQLLSNS+MGSDEDFVVIELGSEDE V S GQQE   SRE + QQP
Sbjct: 181 PIDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGSEDEVVSSTGQQESTISREALVQQP 240

Query: 241 RYHSPKKTENKVGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMDSAADQQLY 300
           RYHSPKK ENKVGK KTRKCHHVSIMGDEGI+VR KD+QFF QPIRRSFSMDSAADQQLY
Sbjct: 241 RYHSPKKLENKVGKSKTRKCHHVSIMGDEGINVRAKDEQFFIQPIRRSFSMDSAADQQLY 300

Query: 301 LTVQMIIHQGRQITESSSSSSAEIDSRNRRSFFPFRSGRGCKNAILPLESDM 353
           LTVQMIIHQ RQI ESSSSSSAE DSRNRRSFFPFRSGRG KN ILPLESDM
Sbjct: 301 LTVQMIIHQDRQINESSSSSSAENDSRNRRSFFPFRSGRGFKNTILPLESDM 351

[Close]

BLAST of HG10012024.1 vs. NCBI nr
Match: XP_031737606.1 (RING-H2 finger protein ATL16 isoform X1 [Cucumis sativus] >KGN57928.1 hypothetical protein Csa_011620 [Cucumis sativus])

HSP 1 Score: 598.6 bits (1542), Expect = 3.5e-167
Identity = 312/355 (87.89%), Postives = 324/355 (91.27%), Query Frame = 0


Query: 1   MELTQKNLHSFESQAFLPIKNQQVPT-YQSPFSTVSDSASPVLAVAVLSVMGTAFLLLGY 60
           ME TQK LHSFE QAFLPIK+QQ+PT Y+S FSTVSDSASPVLAV +LSVMGTAFLLL Y
Sbjct: 1   MESTQKTLHSFEFQAFLPIKDQQIPTSYRSSFSTVSDSASPVLAVVILSVMGTAFLLLSY 60

Query: 61  YIFISKCCSNWHQFSLLRRFSSFHT-QQHEDPFIALSPTTMWNRGLEESMIRQIPAFQFE 120
           YIFI+KCC N HQFSLLRRFSSF T QQ EDPFIALSPTTMWN GLEESMIRQIPAF+FE
Sbjct: 61  YIFITKCCYNCHQFSLLRRFSSFLTPQQREDPFIALSPTTMWNCGLEESMIRQIPAFRFE 120

Query: 121 RDGEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGIT 180
           RDGE SGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGIT
Sbjct: 121 RDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGIT 180

Query: 181 KLPIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELGSEDEAVFSAGQQEGNASREVVFQ 240
           K PIDQ VAPSSSPQNSQLLSN +MGSDEDFVVIELGSEDE VFS GQQEGNASREV+ Q
Sbjct: 181 KPPIDQTVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQEGNASREVLVQ 240

Query: 241 QPRYHSPKKTENKVGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMDSAADQQ 300
           Q    + KKTENK+ KPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMDSAADQQ
Sbjct: 241 Q----TSKKTENKIRKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMDSAADQQ 300

Query: 301 LYLTVQMIIHQGRQITESSSSSS-AEIDSRNRRSFFPFRSGRGCKNAILPLESDM 353
           LYLTV+MIIHQGRQIT SSSSSS AE DSRNRRSF P RSGRGCKNAILPLESD+
Sbjct: 301 LYLTVEMIIHQGRQITRSSSSSSGAESDSRNRRSFLPSRSGRGCKNAILPLESDL 351

[Close]

BLAST of HG10012024.1 vs. NCBI nr
Match: XP_022931044.1 (RING-H2 finger protein ATL16-like [Cucurbita moschata])

HSP 1 Score: 597.4 bits (1539), Expect = 7.8e-167
Identity = 300/352 (85.23%), Postives = 316/352 (89.77%), Query Frame = 0


Query: 1   MELTQKNLHSFESQAFLPIKNQQVPTYQSPFSTVSDSASPVLAVAVLSVMGTAFLLLGYY 60
           ME TQK+LH FES AF  +  QQ+ +Y SPFS+VSDSASP+LAVAVLSVMGT FLLLGYY
Sbjct: 1   MEPTQKSLHIFESPAFASLTKQQISSYHSPFSSVSDSASPILAVAVLSVMGTVFLLLGYY 60

Query: 61  IFISKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTTMWNRGLEESMIRQIPAFQFERD 120
           IFISKCCSNWH FSLLRRFSSFH+QQHEDPFIALSP TMWNRGLE+SMI QIP F+FE+D
Sbjct: 61  IFISKCCSNWHHFSLLRRFSSFHSQQHEDPFIALSP-TMWNRGLEQSMIGQIPTFRFEKD 120

Query: 121 GEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGITKL 180
            EGSG+YGCVVCLSEFQENE LRVLPKCSHTFHLDCID+WLQSNSNCPLCRTSISG TK 
Sbjct: 121 DEGSGLYGCVVCLSEFQENETLRVLPKCSHTFHLDCIDVWLQSNSNCPLCRTSISGTTKP 180

Query: 181 PIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELGSEDEAVFSAGQQEGNASREVVFQQP 240
           PID IVAPSSSPQNSQLLSNS+MGSDEDFVVIELGSEDE V S GQQE   SRE + QQP
Sbjct: 181 PIDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGSEDEVVSSTGQQESTISREALVQQP 240

Query: 241 RYHSPKKTENKVGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMDSAADQQLY 300
           RYHSPKK ENKVGK KTRKCHHVSIMGDEGI+VR KD+QFF QPIRRSFSMDSAADQQLY
Sbjct: 241 RYHSPKKLENKVGKSKTRKCHHVSIMGDEGINVRAKDEQFFIQPIRRSFSMDSAADQQLY 300

Query: 301 LTVQMIIHQGRQITESSSSSSAEIDSRNRRSFFPFRSGRGCKNAILPLESDM 353
           LTVQMIIHQ RQI ESSSSSSAE DSRNRRSFFPFRSGRG KN ILPLESDM
Sbjct: 301 LTVQMIIHQDRQINESSSSSSAENDSRNRRSFFPFRSGRGFKNTILPLESDM 351

[Close]

BLAST of HG10012024.1 vs. NCBI nr
Match: KAG6606381.1 (RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036321.1 RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 594.3 bits (1531), Expect = 6.6e-166
Identity = 299/352 (84.94%), Postives = 315/352 (89.49%), Query Frame = 0


Query: 1   MELTQKNLHSFESQAFLPIKNQQVPTYQSPFSTVSDSASPVLAVAVLSVMGTAFLLLGYY 60
           ME TQK+LH FES AF  +  QQ+ +Y SPFS+VSDSASP+LAVAVLSVMGT  LLLGYY
Sbjct: 1   MEPTQKSLHIFESPAFESLTKQQISSYHSPFSSVSDSASPILAVAVLSVMGTVLLLLGYY 60

Query: 61  IFISKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTTMWNRGLEESMIRQIPAFQFERD 120
           IFISKCCSNWH FSLLRRFSSFH+QQHEDPFIALSP TMWNRGLE+SMI QIP F+FE+D
Sbjct: 61  IFISKCCSNWHHFSLLRRFSSFHSQQHEDPFIALSP-TMWNRGLEQSMIGQIPTFRFEKD 120

Query: 121 GEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGITKL 180
            EGSG+YGCVVCLSEFQE EMLRVLPKCSHTFHLDCID+WLQSNSNCPLCRTSISG TK 
Sbjct: 121 DEGSGLYGCVVCLSEFQEKEMLRVLPKCSHTFHLDCIDVWLQSNSNCPLCRTSISGTTKP 180

Query: 181 PIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELGSEDEAVFSAGQQEGNASREVVFQQP 240
           PID IVAPSSSPQNSQLLSNS+MGSDEDFVVIELGSEDE V S GQQE   SRE + QQP
Sbjct: 181 PIDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGSEDEVVSSTGQQESTISREALVQQP 240

Query: 241 RYHSPKKTENKVGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMDSAADQQLY 300
           RYHSPKK ENKVGK KTRKCHHVSIMGDEGI+VR KD+QFF QPIRRSFSMDSAADQQLY
Sbjct: 241 RYHSPKKLENKVGKSKTRKCHHVSIMGDEGINVRAKDEQFFIQPIRRSFSMDSAADQQLY 300

Query: 301 LTVQMIIHQGRQITESSSSSSAEIDSRNRRSFFPFRSGRGCKNAILPLESDM 353
           LTVQMIIHQ RQI ESSSSSSAE DSRNRRSFFPFRSGRG KN ILPLESDM
Sbjct: 301 LTVQMIIHQDRQINESSSSSSAENDSRNRRSFFPFRSGRGFKNTILPLESDM 351

[Close]

BLAST of HG10012024.1 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 8.4e-63
Identity = 166/382 (43.46%), Postives = 217/382 (56.81%), Query Frame = 0


Query: 1   MELTQKNLHSFESQAFLPIKNQQVPTYQSP-FSTVSDSAS--PVLAVAVLSVMGTAFLLL 60
           M+LT +  + F +  F P       T+ SP F   S S +  P+LA+AV+ ++ TAFLL+
Sbjct: 1   MDLTDRR-NPFNNLVFPPPPPPPSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLV 60

Query: 61  GYYIFISKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTTMWNRGLEESMIRQIPAFQF 120
            YYIF+ KCC NWHQ  + RR         ++P +  SP  + NRGL+ES IR IP F+F
Sbjct: 61  SYYIFVIKCCLNWHQIDIFRR---RRRSSDQNPLMIYSPHEV-NRGLDESAIRAIPVFKF 120

Query: 121 ER-------DGEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLC 180
           ++       + +      C VCL+EFQE+E LR++P C H FH+DCIDIWLQ N+NCPLC
Sbjct: 121 KKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLC 180

Query: 181 RTSISGITKLPIDQIVAPSSSPQNS------QLLSNSIMGSDEDFVVIELGSED----EA 240
           RTS+S      +D I APSS  +NS       L    ++G D+DFVVIELG+ +    E+
Sbjct: 181 RTSVSCEASFTLDLISAPSSPRENSPHSRNRNLEPGLVLGGDDDFVVIELGASNGNNRES 240

Query: 241 VFSAG---QQEGNASREV-VFQQPRYHSPK--KTENKVGKPKTRKCHHVSIMGDEGIDVR 300
           V +     +QE   S EV     P+  SP   K  N+    K RK H V+ MGDE ID R
Sbjct: 241 VRNIDFLTEQERVTSNEVSTGNSPKSVSPLPIKFGNRGMYKKERKFHKVTSMGDECIDTR 300

Query: 301 EKDDQF-FTQPIRRSFSMDSAADQQLYLTVQ-MIIHQGRQIT-----ESSSSSSAEIDSR 349
            KD  F   QPIRRS SMDS+ D+QLYL VQ  I  + RQI      E SSSS       
Sbjct: 301 GKDGHFGEIQPIRRSISMDSSVDRQLYLAVQEEISRRNRQIPVAGDGEDSSSSGGGNSRV 360

[Close]

BLAST of HG10012024.1 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.1e-62
Identity = 155/369 (42.01%), Postives = 216/369 (58.54%), Query Frame = 0


Query: 18  PIKNQQVPTYQSP--FSTVSDSAS--PVLAVAVLSVMGTAFLLLGYYIFISKCCSNWHQF 77
           P+++   P    P  F   S + +  P+LAVAV+ ++ TAFLL+ YY+F+ KCC NWH+ 
Sbjct: 9   PLRDLSFPPPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRI 68

Query: 78  SLLRRFS-SFHTQQHEDPFIALSPTTMWNRGLEESMIRQIPAFQF-ERDGEGSGIY---- 137
            +L RFS S   +  +DP +  SP  + +RGL+ES+IR IP F+F +R  +  G++    
Sbjct: 69  DILGRFSLSRRRRNDQDPLMVYSP-ELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEG 128

Query: 138 ---------GCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGIT 197
                     C VCLSEFQ+ E LR++P CSH FH+DCID+WLQ+N+NCPLCRT +S  T
Sbjct: 129 EEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDT 188

Query: 198 KLPIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELGSE--------DEAVFSAGQQEGN 257
             P D++ APS+SP+N  +L       + ++VVIELGS                GQ+  N
Sbjct: 189 SFPPDRVSAPSTSPENLVMLR-----GENEYVVIELGSSIGSDRDSPRHGRLLTGQERSN 248

Query: 258 AS--REVVFQQPRYHSPKKTENKVGKPKTRKCHHVSIMGDEGIDVRE-KDDQFFT-QPIR 317
           +        Q     SPKK +      K RK H ++ MGDE ID+R  KD+QF + QPIR
Sbjct: 249 SGYLLNENTQNSISPSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIR 308

Query: 318 RSFSMDSAADQQLYLTVQMIIHQGRQIT------ESSSSSSAEIDSRNRRSFFPFRSGRG 349
           RS SMDS+AD+QLYL VQ  I + R++         SSSS    +S+ +RSFF F S R 
Sbjct: 309 RSISMDSSADRQLYLAVQEAIRKNREVLVVGDGGGCSSSSGNVSNSKVKRSFFSFGSSRR 368

[Close]

BLAST of HG10012024.1 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.8e-25
Identity = 65/147 (44.22%), Postives = 91/147 (61.90%), Query Frame = 0


Query: 32  STVSDSASPVLAVAVLSVMGTAFLLLGYYIFISKCCSNWHQFSLLRRFSSFHTQQHEDPF 91
           S+ S S SP+L +A++ ++ +A +L+ YY  ISK C   HQ S     +  H    E  F
Sbjct: 48  SSSSSSFSPLL-IALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNH--NGEGFF 107

Query: 92  IALSPTTMWNRGLEESMIRQIPAFQFER-DGEGSGIYGCVVCLSEFQENEMLRVLPKCSH 151
            +    +    GL ESMI+ I  ++++  DG   G   C VCLSEF+ENE LR+LPKC+H
Sbjct: 108 SSTQRISTNGDGLNESMIKSITVYKYKSGDGFVDG-SDCSVCLSEFEENESLRLLPKCNH 167

Query: 152 TFHLDCIDIWLQSNSNCPLCRTSISGI 178
            FHL CID WL+S+SNCPLCR  ++G+
Sbjct: 168 AFHLPCIDTWLKSHSNCPLCRAFVTGV 190

[Close]

BLAST of HG10012024.1 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 2.0e-24
Identity = 77/222 (34.68%), Postives = 117/222 (52.70%), Query Frame = 0


Query: 35  SDSASPVLAVAVLSVMGTAFLLLGYYIFISKCC------SNWHQFSLLRRFSSFHTQQ-- 94
           S   SP+L +A++ ++ +AF+L+ YY  ISK C      S+    + + R SS +T Q  
Sbjct: 53  SSDFSPLL-IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGT 112

Query: 95  -HEDPFIALSPTTM----WNRGLEESMIRQIPAFQFERDGEGSGIYGCVVCLSEFQENEM 154
            + +   A +P          GL+ES+I+ I  +++ +         C VCLSEFQENE 
Sbjct: 113 NNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENES 172

Query: 155 LRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGITKLPIDQIVAPSSSPQNSQLL--S 214
           LR+LPKC+H FH+ CID WL+S+SNCPLCR  I   + + I  +        N Q++  +
Sbjct: 173 LRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLT-------NQQIVTEN 232

Query: 215 NSIMGSDEDFVVIELGSEDEAVFSAGQQEGNASREVVFQQPR 242
           NSI   D+  VV+ L  E+    +    EG+  +    Q  R
Sbjct: 233 NSISTGDDSVVVVNLDLENSRSRNETVNEGSTPKPPEMQDSR 266

[Close]

BLAST of HG10012024.1 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 7.7e-24
Identity = 70/196 (35.71%), Postives = 106/196 (54.08%), Query Frame = 0


Query: 42  LAVAVLSVMGTAFLLLGYYIFISKCCSN---------WHQFSLLRRFSSFHTQQHEDPFI 101
           L +A+  +  TAFLL  YY  +SK C+N           +  ++   +S      +DPF 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 102 ALSPTTMWNRGLEESMIRQIPAFQFERDGEGSGIYG--CVVCLSEFQENEMLRVLPKCSH 161
             S T     GL++++I++I  F+ ++   G  I G  C +CL EF E+E LR+LPKC+H
Sbjct: 121 LESSTA----GLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNH 180

Query: 162 TFHLDCIDIWLQSNSNCPLCRTSISGITKLPIDQIVAPSSSPQNSQLLSN-----SIMGS 221
           TFH+ CID WL+S+SNCPLCR  I          IV  +  P++  ++ N     S +GS
Sbjct: 181 TFHVVCIDRWLKSHSNCPLCRAKI----------IVPTTQQPEHHVVVMNLDRFTSNVGS 240

[Close]

BLAST of HG10012024.1 vs. ExPASy TrEMBL
Match: A0A0A0L809 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G393910 PE=4 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.7e-167
Identity = 312/355 (87.89%), Postives = 324/355 (91.27%), Query Frame = 0


Query: 1   MELTQKNLHSFESQAFLPIKNQQVPT-YQSPFSTVSDSASPVLAVAVLSVMGTAFLLLGY 60
           ME TQK LHSFE QAFLPIK+QQ+PT Y+S FSTVSDSASPVLAV +LSVMGTAFLLL Y
Sbjct: 1   MESTQKTLHSFEFQAFLPIKDQQIPTSYRSSFSTVSDSASPVLAVVILSVMGTAFLLLSY 60

Query: 61  YIFISKCCSNWHQFSLLRRFSSFHT-QQHEDPFIALSPTTMWNRGLEESMIRQIPAFQFE 120
           YIFI+KCC N HQFSLLRRFSSF T QQ EDPFIALSPTTMWN GLEESMIRQIPAF+FE
Sbjct: 61  YIFITKCCYNCHQFSLLRRFSSFLTPQQREDPFIALSPTTMWNCGLEESMIRQIPAFRFE 120

Query: 121 RDGEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGIT 180
           RDGE SGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGIT
Sbjct: 121 RDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGIT 180

Query: 181 KLPIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELGSEDEAVFSAGQQEGNASREVVFQ 240
           K PIDQ VAPSSSPQNSQLLSN +MGSDEDFVVIELGSEDE VFS GQQEGNASREV+ Q
Sbjct: 181 KPPIDQTVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQEGNASREVLVQ 240

Query: 241 QPRYHSPKKTENKVGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMDSAADQQ 300
           Q    + KKTENK+ KPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMDSAADQQ
Sbjct: 241 Q----TSKKTENKIRKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMDSAADQQ 300

Query: 301 LYLTVQMIIHQGRQITESSSSSS-AEIDSRNRRSFFPFRSGRGCKNAILPLESDM 353
           LYLTV+MIIHQGRQIT SSSSSS AE DSRNRRSF P RSGRGCKNAILPLESD+
Sbjct: 301 LYLTVEMIIHQGRQITRSSSSSSGAESDSRNRRSFLPSRSGRGCKNAILPLESDL 351

[Close]

BLAST of HG10012024.1 vs. ExPASy TrEMBL
Match: A0A6J1ET78 (RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111437354 PE=4 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 3.8e-167
Identity = 300/352 (85.23%), Postives = 316/352 (89.77%), Query Frame = 0


Query: 1   MELTQKNLHSFESQAFLPIKNQQVPTYQSPFSTVSDSASPVLAVAVLSVMGTAFLLLGYY 60
           ME TQK+LH FES AF  +  QQ+ +Y SPFS+VSDSASP+LAVAVLSVMGT FLLLGYY
Sbjct: 1   MEPTQKSLHIFESPAFASLTKQQISSYHSPFSSVSDSASPILAVAVLSVMGTVFLLLGYY 60

Query: 61  IFISKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTTMWNRGLEESMIRQIPAFQFERD 120
           IFISKCCSNWH FSLLRRFSSFH+QQHEDPFIALSP TMWNRGLE+SMI QIP F+FE+D
Sbjct: 61  IFISKCCSNWHHFSLLRRFSSFHSQQHEDPFIALSP-TMWNRGLEQSMIGQIPTFRFEKD 120

Query: 121 GEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGITKL 180
            EGSG+YGCVVCLSEFQENE LRVLPKCSHTFHLDCID+WLQSNSNCPLCRTSISG TK 
Sbjct: 121 DEGSGLYGCVVCLSEFQENETLRVLPKCSHTFHLDCIDVWLQSNSNCPLCRTSISGTTKP 180

Query: 181 PIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELGSEDEAVFSAGQQEGNASREVVFQQP 240
           PID IVAPSSSPQNSQLLSNS+MGSDEDFVVIELGSEDE V S GQQE   SRE + QQP
Sbjct: 181 PIDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGSEDEVVSSTGQQESTISREALVQQP 240

Query: 241 RYHSPKKTENKVGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMDSAADQQLY 300
           RYHSPKK ENKVGK KTRKCHHVSIMGDEGI+VR KD+QFF QPIRRSFSMDSAADQQLY
Sbjct: 241 RYHSPKKLENKVGKSKTRKCHHVSIMGDEGINVRAKDEQFFIQPIRRSFSMDSAADQQLY 300

Query: 301 LTVQMIIHQGRQITESSSSSSAEIDSRNRRSFFPFRSGRGCKNAILPLESDM 353
           LTVQMIIHQ RQI ESSSSSSAE DSRNRRSFFPFRSGRG KN ILPLESDM
Sbjct: 301 LTVQMIIHQDRQINESSSSSSAENDSRNRRSFFPFRSGRGFKNTILPLESDM 351

[Close]

BLAST of HG10012024.1 vs. ExPASy TrEMBL
Match: A0A6J1K6J7 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111491128 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 1.6e-165
Identity = 298/352 (84.66%), Postives = 314/352 (89.20%), Query Frame = 0


Query: 1   MELTQKNLHSFESQAFLPIKNQQVPTYQSPFSTVSDSASPVLAVAVLSVMGTAFLLLGYY 60
           ME TQK+LH FES AF  +  QQ+ +Y SPFS+VSDSASP+LAVAVLSVMGT  LLLGYY
Sbjct: 1   MEPTQKSLHIFESPAFESLTKQQISSYHSPFSSVSDSASPILAVAVLSVMGTVLLLLGYY 60

Query: 61  IFISKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTTMWNRGLEESMIRQIPAFQFERD 120
           IFI+KCCSNWH FSLLRRFSSFH+QQHEDPFIALSP TMWNRGLE+SMI QIP F+FE D
Sbjct: 61  IFITKCCSNWHHFSLLRRFSSFHSQQHEDPFIALSP-TMWNRGLEQSMIGQIPTFRFEGD 120

Query: 121 GEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGITKL 180
            EGSG+YGCVVCLSEFQENEMLRVLPKCSHTFHLDCID+WLQSNSNCPLCRTSISG TK 
Sbjct: 121 DEGSGLYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDVWLQSNSNCPLCRTSISGTTKP 180

Query: 181 PIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELGSEDEAVFSAGQQEGNASREVVFQQP 240
           PID IVAPSSSPQNSQLLSNS+MGSDEDFVVIELG EDE V S GQQE   SRE + QQP
Sbjct: 181 PIDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGREDEVVSSTGQQESTISREALVQQP 240

Query: 241 RYHSPKKTENKVGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMDSAADQQLY 300
           RYHSPKK ENKVGK KTRKCHHVSIMGDEGI+VR KD+QFF QPIRRSFSMDSAADQQLY
Sbjct: 241 RYHSPKKLENKVGKSKTRKCHHVSIMGDEGINVRAKDEQFFIQPIRRSFSMDSAADQQLY 300

Query: 301 LTVQMIIHQGRQITESSSSSSAEIDSRNRRSFFPFRSGRGCKNAILPLESDM 353
           LTVQMIIHQ RQI ESSSSSSAE DSRNRRSFFPFRSGRG KN ILPLESDM
Sbjct: 301 LTVQMIIHQDRQINESSSSSSAENDSRNRRSFFPFRSGRGFKNTILPLESDM 351

[Close]

BLAST of HG10012024.1 vs. ExPASy TrEMBL
Match: A0A6J1CXJ5 (RING-H2 finger protein ATL16-like OS=Momordica charantia OX=3673 GN=LOC111015355 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 3.7e-146
Identity = 268/301 (89.04%), Postives = 278/301 (92.36%), Query Frame = 0


Query: 53  AFLLLGYYIFISKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTTMWNRGLEESMIRQI 112
           +FLLLGYYIFI+KCCSNWHQFSLLRRFSSFHTQQHEDPFIALSP TMWNRGLEESMIR+I
Sbjct: 225 SFLLLGYYIFINKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSP-TMWNRGLEESMIREI 284

Query: 113 PAFQFERDGEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRT 172
           PAFQFERDG G GIYGCVVCLSEFQ++EMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRT
Sbjct: 285 PAFQFERDGGGRGIYGCVVCLSEFQDDEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRT 344

Query: 173 SISGITKLPIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELGSEDEAVFSAGQQEGNAS 232
           SISG TK PID IVAPSSSPQNSQLLSNS+MGSDEDFVVIELG EDE V SAGQQE   S
Sbjct: 345 SISGTTKPPIDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGGEDEVVSSAGQQERTVS 404

Query: 233 REV-VFQQPRYHSPKKTENKVGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSM 292
           REV V QQPR HSPKK ENKVGK KTRKCHHVSIMGDEGI+VREKDDQFF QPIRRSFSM
Sbjct: 405 REVLVQQQPRNHSPKKFENKVGKSKTRKCHHVSIMGDEGINVREKDDQFFIQPIRRSFSM 464

Query: 293 DSAADQQLYLTVQMIIHQGRQITESSSSSSAEIDSRNRRSFFPFRSGRGCKNAILPLESD 352
           DSAADQQLYLTVQMIIHQG QITE SSS++AE DSRNRRSF PFRSGRG KNAILPLESD
Sbjct: 465 DSAADQQLYLTVQMIIHQGSQITE-SSSTTAESDSRNRRSFLPFRSGRGFKNAILPLESD 523

[Close]

BLAST of HG10012024.1 vs. ExPASy TrEMBL
Match: A0A5A7T7A7 (RING-H2 finger protein ATL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00990 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 1.3e-127
Identity = 236/255 (92.55%), Postives = 240/255 (94.12%), Query Frame = 0


Query: 99  MWNRGLEESMIRQIPAFQFERDGEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCID 158
           MWNRGLEESMIRQIPAF+FERDGE SGIYGCVVCLSEFQENEMLR LPKCSHTFHLDCID
Sbjct: 1   MWNRGLEESMIRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRALPKCSHTFHLDCID 60

Query: 159 IWLQSNSNCPLCRTSISGITKLPIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELGSED 218
           IWLQSNSNCPLCRTSISGITK PI QIVAPSSSPQNSQLLSNS+MGSDEDFVVIELGSED
Sbjct: 61  IWLQSNSNCPLCRTSISGITKPPIHQIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGSED 120

Query: 219 EAVFSAGQQEGNASREVVFQQPRYHSPKKTENKVGKPKTRKCHHVSIMGDEGIDVREKDD 278
           E VFS GQQEGNASR V  QQ    +PKKTENK+GKPKTRKCHHVSIMGDEGIDVREKDD
Sbjct: 121 EVVFSEGQQEGNASRNVPVQQ----TPKKTENKIGKPKTRKCHHVSIMGDEGIDVREKDD 180

Query: 279 QFFTQPIRRSFSMDSAADQQLYLTVQMIIHQGRQITE-SSSSSSAEIDSRNRRSFFPFRS 338
           QFFTQPIRRSFSMDSAADQQLYLTVQMIIHQGRQITE SSSSSSAE DSRNRRSFFPFRS
Sbjct: 181 QFFTQPIRRSFSMDSAADQQLYLTVQMIIHQGRQITESSSSSSSAESDSRNRRSFFPFRS 240

Query: 339 GRGCKNAILPLESDM 353
           GRGCKNAILPLESDM
Sbjct: 241 GRGCKNAILPLESDM 251

[Close]

BLAST of HG10012024.1 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 242.3 bits (617), Expect = 6.0e-64
Identity = 166/382 (43.46%), Postives = 217/382 (56.81%), Query Frame = 0


Query: 1   MELTQKNLHSFESQAFLPIKNQQVPTYQSP-FSTVSDSAS--PVLAVAVLSVMGTAFLLL 60
           M+LT +  + F +  F P       T+ SP F   S S +  P+LA+AV+ ++ TAFLL+
Sbjct: 1   MDLTDRR-NPFNNLVFPPPPPPPSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLV 60

Query: 61  GYYIFISKCCSNWHQFSLLRRFSSFHTQQHEDPFIALSPTTMWNRGLEESMIRQIPAFQF 120
            YYIF+ KCC NWHQ  + RR         ++P +  SP  + NRGL+ES IR IP F+F
Sbjct: 61  SYYIFVIKCCLNWHQIDIFRR---RRRSSDQNPLMIYSPHEV-NRGLDESAIRAIPVFKF 120

Query: 121 ER-------DGEGSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLC 180
           ++       + +      C VCL+EFQE+E LR++P C H FH+DCIDIWLQ N+NCPLC
Sbjct: 121 KKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLC 180

Query: 181 RTSISGITKLPIDQIVAPSSSPQNS------QLLSNSIMGSDEDFVVIELGSED----EA 240
           RTS+S      +D I APSS  +NS       L    ++G D+DFVVIELG+ +    E+
Sbjct: 181 RTSVSCEASFTLDLISAPSSPRENSPHSRNRNLEPGLVLGGDDDFVVIELGASNGNNRES 240

Query: 241 VFSAG---QQEGNASREV-VFQQPRYHSPK--KTENKVGKPKTRKCHHVSIMGDEGIDVR 300
           V +     +QE   S EV     P+  SP   K  N+    K RK H V+ MGDE ID R
Sbjct: 241 VRNIDFLTEQERVTSNEVSTGNSPKSVSPLPIKFGNRGMYKKERKFHKVTSMGDECIDTR 300

Query: 301 EKDDQF-FTQPIRRSFSMDSAADQQLYLTVQ-MIIHQGRQIT-----ESSSSSSAEIDSR 349
            KD  F   QPIRRS SMDS+ D+QLYL VQ  I  + RQI      E SSSS       
Sbjct: 301 GKDGHFGEIQPIRRSISMDSSVDRQLYLAVQEEISRRNRQIPVAGDGEDSSSSGGGNSRV 360

[Close]

BLAST of HG10012024.1 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 241.9 bits (616), Expect = 7.8e-64
Identity = 155/369 (42.01%), Postives = 216/369 (58.54%), Query Frame = 0


Query: 18  PIKNQQVPTYQSP--FSTVSDSAS--PVLAVAVLSVMGTAFLLLGYYIFISKCCSNWHQF 77
           P+++   P    P  F   S + +  P+LAVAV+ ++ TAFLL+ YY+F+ KCC NWH+ 
Sbjct: 9   PLRDLSFPPPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRI 68

Query: 78  SLLRRFS-SFHTQQHEDPFIALSPTTMWNRGLEESMIRQIPAFQF-ERDGEGSGIY---- 137
            +L RFS S   +  +DP +  SP  + +RGL+ES+IR IP F+F +R  +  G++    
Sbjct: 69  DILGRFSLSRRRRNDQDPLMVYSP-ELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEG 128

Query: 138 ---------GCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGIT 197
                     C VCLSEFQ+ E LR++P CSH FH+DCID+WLQ+N+NCPLCRT +S  T
Sbjct: 129 EEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDT 188

Query: 198 KLPIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELGSE--------DEAVFSAGQQEGN 257
             P D++ APS+SP+N  +L       + ++VVIELGS                GQ+  N
Sbjct: 189 SFPPDRVSAPSTSPENLVMLR-----GENEYVVIELGSSIGSDRDSPRHGRLLTGQERSN 248

Query: 258 AS--REVVFQQPRYHSPKKTENKVGKPKTRKCHHVSIMGDEGIDVRE-KDDQFFT-QPIR 317
           +        Q     SPKK +      K RK H ++ MGDE ID+R  KD+QF + QPIR
Sbjct: 249 SGYLLNENTQNSISPSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIR 308

Query: 318 RSFSMDSAADQQLYLTVQMIIHQGRQIT------ESSSSSSAEIDSRNRRSFFPFRSGRG 349
           RS SMDS+AD+QLYL VQ  I + R++         SSSS    +S+ +RSFF F S R 
Sbjct: 309 RSISMDSSADRQLYLAVQEAIRKNREVLVVGDGGGCSSSSGNVSNSKVKRSFFSFGSSRR 368

[Close]

BLAST of HG10012024.1 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-26
Identity = 65/147 (44.22%), Postives = 91/147 (61.90%), Query Frame = 0


Query: 32  STVSDSASPVLAVAVLSVMGTAFLLLGYYIFISKCCSNWHQFSLLRRFSSFHTQQHEDPF 91
           S+ S S SP+L +A++ ++ +A +L+ YY  ISK C   HQ S     +  H    E  F
Sbjct: 48  SSSSSSFSPLL-IALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNH--NGEGFF 107

Query: 92  IALSPTTMWNRGLEESMIRQIPAFQFER-DGEGSGIYGCVVCLSEFQENEMLRVLPKCSH 151
            +    +    GL ESMI+ I  ++++  DG   G   C VCLSEF+ENE LR+LPKC+H
Sbjct: 108 SSTQRISTNGDGLNESMIKSITVYKYKSGDGFVDG-SDCSVCLSEFEENESLRLLPKCNH 167

Query: 152 TFHLDCIDIWLQSNSNCPLCRTSISGI 178
            FHL CID WL+S+SNCPLCR  ++G+
Sbjct: 168 AFHLPCIDTWLKSHSNCPLCRAFVTGV 190

[Close]

BLAST of HG10012024.1 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 1.4e-25
Identity = 77/222 (34.68%), Postives = 117/222 (52.70%), Query Frame = 0


Query: 35  SDSASPVLAVAVLSVMGTAFLLLGYYIFISKCC------SNWHQFSLLRRFSSFHTQQ-- 94
           S   SP+L +A++ ++ +AF+L+ YY  ISK C      S+    + + R SS +T Q  
Sbjct: 53  SSDFSPLL-IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGT 112

Query: 95  -HEDPFIALSPTTM----WNRGLEESMIRQIPAFQFERDGEGSGIYGCVVCLSEFQENEM 154
            + +   A +P          GL+ES+I+ I  +++ +         C VCLSEFQENE 
Sbjct: 113 NNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENES 172

Query: 155 LRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGITKLPIDQIVAPSSSPQNSQLL--S 214
           LR+LPKC+H FH+ CID WL+S+SNCPLCR  I   + + I  +        N Q++  +
Sbjct: 173 LRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLT-------NQQIVTEN 232

Query: 215 NSIMGSDEDFVVIELGSEDEAVFSAGQQEGNASREVVFQQPR 242
           NSI   D+  VV+ L  E+    +    EG+  +    Q  R
Sbjct: 233 NSISTGDDSVVVVNLDLENSRSRNETVNEGSTPKPPEMQDSR 266

[Close]

BLAST of HG10012024.1 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 112.8 bits (281), Expect = 5.4e-25
Identity = 70/196 (35.71%), Postives = 106/196 (54.08%), Query Frame = 0


Query: 42  LAVAVLSVMGTAFLLLGYYIFISKCCSN---------WHQFSLLRRFSSFHTQQHEDPFI 101
           L +A+  +  TAFLL  YY  +SK C+N           +  ++   +S      +DPF 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 102 ALSPTTMWNRGLEESMIRQIPAFQFERDGEGSGIYG--CVVCLSEFQENEMLRVLPKCSH 161
             S T     GL++++I++I  F+ ++   G  I G  C +CL EF E+E LR+LPKC+H
Sbjct: 121 LESSTA----GLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNH 180

Query: 162 TFHLDCIDIWLQSNSNCPLCRTSISGITKLPIDQIVAPSSSPQNSQLLSN-----SIMGS 221
           TFH+ CID WL+S+SNCPLCR  I          IV  +  P++  ++ N     S +GS
Sbjct: 181 TFHVVCIDRWLKSHSNCPLCRAKI----------IVPTTQQPEHHVVVMNLDRFTSNVGS 240

The following BLAST results are available for this feature:

BLAST of HG10012024.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889009.1	7.8e-175	92.98	RING-H2 finger protein ATL16-like [Benincasa hispida]	[more]
XP_023533032.1	2.7e-167	85.51	RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo]	[more]
XP_031737606.1	3.5e-167	87.89	RING-H2 finger protein ATL16 isoform X1 [Cucumis sativus] >KGN57928.1 hypothetic...	[more]
XP_022931044.1	7.8e-167	85.23	RING-H2 finger protein ATL16-like [Cucurbita moschata]	[more]
KAG6606381.1	6.6e-166	84.94	RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]

BLAST of HG10012024.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93823	8.4e-63	43.46	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q9LSW9	1.1e-62	42.01	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
Q9LF64	1.8e-25	44.22	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9SRQ8	2.0e-24	34.68	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
P0C041	7.7e-24	35.71	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]

BLAST of HG10012024.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L809	1.7e-167	87.89	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G393910 P...	[more]
A0A6J1ET78	3.8e-167	85.23	RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111437354 ...	[more]
A0A6J1K6J7	1.6e-165	84.66	RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111491128 PE...	[more]
A0A6J1CXJ5	3.7e-146	89.04	RING-H2 finger protein ATL16-like OS=Momordica charantia OX=3673 GN=LOC111015355...	[more]
A0A5A7T7A7	1.3e-127	92.55	RING-H2 finger protein ATL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of HG10012024.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04360.1	6.0e-64	43.46	RING/U-box superfamily protein	[more]
AT5G43420.1	7.8e-64	42.01	RING/U-box superfamily protein	[more]
AT5G17600.1	1.3e-26	44.22	RING/U-box superfamily protein	[more]
AT3G03550.1	1.4e-25	34.68	RING/U-box superfamily protein	[more]
AT4G17905.1	5.4e-25	35.71	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 129..170 e-value: 1.6E-7 score: 41.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 129..171 e-value: 8.4E-13 score: 48.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 129..171 score: 12.917115
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 103..178 e-value: 4.2E-22 score: 79.1
None	No IPR available	PIRSR	PIRSR004030-1	PIRSR004030-1	coord: 124..183 e-value: 0.0048 score: 14.9
None	No IPR available	PANTHER	PTHR46913:SF8	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 1..349
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 129..171 e-value: 9.9173E-18 score: 73.8753
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 128..176
IPR044600	RING-H2 finger protein ATL1/ATL16	PANTHER	PTHR46913	RING-H2 FINGER PROTEIN ATL16	coord: 1..349

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10012024	HG10012024	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10012024.1-cds	HG10012024.1-cds-Chr01:16674986..16676044	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10012024.1	HG10012024.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity