HG10008963.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008963.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	SKP1-like protein 21 isoform X1
Location	Chr06: 1127265 .. 1130772 (-)
Sequence length	1071
RNA-Seq Expression	HG10008963.1
Synteny	HG10008963.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTCTTACATTTGGCTTCAAACGGCTGACGGCTCAATACAGCAAGTTGAAGAAGAGGTTGCTATGTTTTGCCCTATGATATGTCGGGAAATACTACAAACAGGGATGGGATCCTCCAAAAATTATGCAATATCTCTTCCACAGCGAGTGAATCCTGCTATATTAGGTTTAATTCTTGACTATTGCAGGTTTCATCAAGTACCAGGTCGCTCCAATAAGGTCAGTATTTCTCTGAACCTGCTCTGACCTCTAACCACTATCATCCATTATGGAGCTGTGGAGATTTAATGGATGCTGTTACTTATGGACAACTCAGTAGTCATTTTACAAATGAACATGGGTTATTCTTTGCCATAGGAGCGTAAAACATTTGATGAAAAATTCATTCGCATGGATACAAAAAAGCTGTGTGAGTTGACGTCTGCTGCTGACAGCCTCCAATTGAAACCTTTGGTTGATCTAACTAGTCGAGCACTTGCACGAATTATTGAAGGAAAGACTCCAGAGGAGATAAGGGAGACATTTCATCTACCTGATGATCTCACAGAGGTGTGTCCTACACACACACACACACACACCCAGACACCAACACACACACGCACATATTCAGTTTTGAGTGTCTCACTCAGGTTTAATTCTACAGGAGGAAAAGCTGGAGCCCCTACGAAACATAACAGATGATCCACGCATTCGGCTCTTAAATCGATTATATGCACGGAAGAGGAAAGAATTAAGAGAAAGAGAGAAATTGAAGGTGCATTGCCTTTTTTAATGGGAAACAATACTGATATTCATATATTACTGGACTTTTTTTTATTATTATTTAAAAAAGAAAAAAAAGAAGCAAATTACAGGAGAAAGAGGATTAGGTATTCTCTAATAAAGAAAAAGAAAAATACAAGATCAAAAGAGCCTATAATTATCCCAAAATCTATACTTTTTGCTATTTTGTTCATATCCTTGTTTTTTAGCCCTTTCCGAGGCTCTGAGTAGTATACTAATCTGACCTTGAGTTATGTTATTCAATTGTAGTCCCCCGTTAGTAATTTAGCATGTCAATTTTCACAACTTTCAGAATGTTGAGATTGAGGAGCGGGTGGATGATAGATCAGTCGATGACCTTTTGTCTTTTATAAATGGAGGAGACGGAGGTACTTGAGAATTATTCACTTGTTCTTGATTTCTGTCTCATTTCATTCTGTTAACTTTTAACTGGGCTGTCTTCTTCTTTTCATGCTATAGATTTCATATTGCACCTTGAATTTTACTGTCCTTGTCAAGTGGATTTTGCAATGTATAAGATTTTGCAACAATTTACCTGTAAACAAGTTGCTATTTATCTATATCTTCTGAAATTTTCAGTGCTAAATGTCTTTTATTTATTCTTTGTAATTCAACAACTATTATTCCACATGCAGATTCAAAGGCAGTTAAAACAAACAAAAACAAAAAGAAAAATCGGAGGAGAAAAGATCAACAAAAGGATTCTTCTTCAACCAATGAAAATGGGAACCATGATAAAATAGGGGTTTGCATCTGTTCATGGTTTTTTGTTTTTGGCTTATCTAAATATGTTGCCTTTTGTCTTAAAAAAAAGTTCCCTTTTTCCCATCAGAAGTAGCTCTGATTATTAAATTCTGCTATCTTATATTGTTTAGGAGTTGGATGTTCTTCCTTGTTGCCAGAATAATGAGTTTAACAAGATTTTGGCGGCATCTCCGAGTAGAACTGTGAAATCACAGGATTCAGCAGCTGCCATGTATTCATCTAAGATTGACTACGATGATGCGGATATTTATGATGATCTAGATCCTGCAATGAAAGAGGAACTTGACAGGTTAGATATGCCAAGTGAATGTTGTACTGAACCCTCTTTTCAAAATACTTCATTCAGCAGTCGGGCAAGTGTTAAATGTTAGTTGATATGAGCCCTTTCCCTCACGTTTTAGTGCTTGCTTCTTCTGCATACGCATATGCCATAAGGTTATAGATGATATTTGATTTTGATTCTGATTTGTGAAATATTTCAGTTTTCCTCTCTTTACCGTTAATTAATGAGTGAAATGTTCTAATCTGGCTTTGTGAGATAAGCAAAATGATCCAAAAAAAAAGGAGAGGAAAATTTAGGTCTTGAGGATTAGTACTGGGCTCAATTTTAGTTTGCTGTGTAATCTTCTTATAGAAAAAAACAACTTAAAAAATTTTGGGTTTTTTTTTTAGTTGGGGGAGTGGCTTGTGGAGATTCTTTCAGGATAGTGGTTGAAGGGCAAGGGCAGAATTTTGTGGTCAAACGCTTCTAAAGCTCGTTTGTAGTTTATATGGAAAAAATGCAAGAACTTTCGTTGATAAGTTGAATTCTTTTGAATCTTTATGTGATTATTTATTCTTCAGGGCCTCTAATCCGAGTGCCCCATTACAACCCTTTTTGTTTCCTACTGCTACTCTTCTTTCACTTTGAAATTAGATTGGAGGGCTTTTATTTGATCCTCAGTTGGGCCAAGTGTTGGCTGGCTTCTTTCTTCAATGAGACATCTTGACCTGTTTCTTATTAAAAAAAATGTGTAACAAAAAATTAAAAGCCTATTGAAACCATAAACCATCTAGCCTACAACAAGACATCATTCTTTCCAAAATTTCATGGGGTGGGGAAACCATGTCTTAGACGTTATTTGATTAGTCTTTGAAGCCGAATAGCATGAAAATAGTGGAACTATCTCAATCCAGGATTTCATATTCTCTTTTATCACGAGACAACTGTCATGAATATTTTGAATCACAAAAATCTTTCATCGATGTTACACACTACTTCAGGTTACTGTTTACGTGGTTAGCAGTCCCTTGTATTAACCATATTGACTCAAATGGATGTCTTTGATTTTATAAAAAAAATGTTATTTTTCTTGTACTAGTCTTCTGCCATATTGAAAATCATATTTTCTAGTAGTGTGTCTGCTAACAGCAGTCGTCTTCAAAATGCACTTCTTTCTATCACCATCTTAGTTAGTCAATCTCTTGGATGCAGGGAAGTAGAAGACTTCGCTAGAAGATTGAATTCAGATTGGCCAGAAAGAGTGCAAGAAATTTTATCGCTAGGCCAAGAACGAAAACTGGTGACAGTATTAACTGGCAATGGCTCATCACCCAGATTCACAAGTAAGTTTTGTGTTAATTATTTCTTTTACTTAGAAGAGAGAGAGATTGTCTTGAACCGTGGTAATATCATATTTTAAGTACGGGCCTGGCTGTTATTAGTTGAGAATTAAATATCCGATATTTATCGTCTACCAAATATTGTATTACATATGGGACGATACTATCGAAATTGGTCTCCACAAACATTTGAGGGGTGGAGCATTTCGGTTTTAGATAATCGCTAAACTAAACCGTAACATGAAGTTCCAAGTTTTTGAAGTAGAGCTATTGGAGTGACTGGTGCATTTATTTGATATGTCTAGAACAGGTGCTGATAGGAGGTAGTAGTCTTCCTATCAGAGTTCGGAGGTAG

mRNA sequence

ATGAAGTCTTACATTTGGCTTCAAACGGCTGACGGCTCAATACAGCAAGTTGAAGAAGAGGTTGCTATGTTTTGCCCTATGATATGTCGGGAAATACTACAAACAGGGATGGGATCCTCCAAAAATTATGCAATATCTCTTCCACAGCGAGTGAATCCTGCTATATTAGGTTTAATTCTTGACTATTGCAGGTTTCATCAAGTACCAGGTCGCTCCAATAAGGAGCGTAAAACATTTGATGAAAAATTCATTCGCATGGATACAAAAAAGCTGTGTGAGTTGACGTCTGCTGCTGACAGCCTCCAATTGAAACCTTTGGTTGATCTAACTAGTCGAGCACTTGCACGAATTATTGAAGGAAAGACTCCAGAGGAGATAAGGGAGACATTTCATCTACCTGATGATCTCACAGAGGAGGAAAAGCTGGAGCCCCTACGAAACATAACAGATGATCCACGCATTCGGCTCTTAAATCGATTATATGCACGGAAGAGGAAAGAATTAAGAGAAAGAGAGAAATTGAAGAATGTTGAGATTGAGGAGCGGGTGGATGATAGATCAGTCGATGACCTTTTGTCTTTTATAAATGGAGGAGACGGAGATTCAAAGGCAGTTAAAACAAACAAAAACAAAAAGAAAAATCGGAGGAGAAAAGATCAACAAAAGGATTCTTCTTCAACCAATGAAAATGGGAACCATGATAAAATAGGGGAGTTGGATGTTCTTCCTTGTTGCCAGAATAATGAGTTTAACAAGATTTTGGCGGCATCTCCGAGTAGAACTGTGAAATCACAGGATTCAGCAGCTGCCATGTATTCATCTAAGATTGACTACGATGATGCGGATATTTATGATGATCTAGATCCTGCAATGAAAGAGGAACTTGACAGGGAAGTAGAAGACTTCGCTAGAAGATTGAATTCAGATTGGCCAGAAAGAGTGCAAGAAATTTTATCGCTAGGCCAAGAACGAAAACTGGTGACAGTATTAACTGGCAATGGCTCATCACCCAGATTCACAAAACAGGTGCTGATAGGAGGTAGTAGTCTTCCTATCAGAGTTCGGAGGTAG

Coding sequence (CDS)

ATGAAGTCTTACATTTGGCTTCAAACGGCTGACGGCTCAATACAGCAAGTTGAAGAAGAGGTTGCTATGTTTTGCCCTATGATATGTCGGGAAATACTACAAACAGGGATGGGATCCTCCAAAAATTATGCAATATCTCTTCCACAGCGAGTGAATCCTGCTATATTAGGTTTAATTCTTGACTATTGCAGGTTTCATCAAGTACCAGGTCGCTCCAATAAGGAGCGTAAAACATTTGATGAAAAATTCATTCGCATGGATACAAAAAAGCTGTGTGAGTTGACGTCTGCTGCTGACAGCCTCCAATTGAAACCTTTGGTTGATCTAACTAGTCGAGCACTTGCACGAATTATTGAAGGAAAGACTCCAGAGGAGATAAGGGAGACATTTCATCTACCTGATGATCTCACAGAGGAGGAAAAGCTGGAGCCCCTACGAAACATAACAGATGATCCACGCATTCGGCTCTTAAATCGATTATATGCACGGAAGAGGAAAGAATTAAGAGAAAGAGAGAAATTGAAGAATGTTGAGATTGAGGAGCGGGTGGATGATAGATCAGTCGATGACCTTTTGTCTTTTATAAATGGAGGAGACGGAGATTCAAAGGCAGTTAAAACAAACAAAAACAAAAAGAAAAATCGGAGGAGAAAAGATCAACAAAAGGATTCTTCTTCAACCAATGAAAATGGGAACCATGATAAAATAGGGGAGTTGGATGTTCTTCCTTGTTGCCAGAATAATGAGTTTAACAAGATTTTGGCGGCATCTCCGAGTAGAACTGTGAAATCACAGGATTCAGCAGCTGCCATGTATTCATCTAAGATTGACTACGATGATGCGGATATTTATGATGATCTAGATCCTGCAATGAAAGAGGAACTTGACAGGGAAGTAGAAGACTTCGCTAGAAGATTGAATTCAGATTGGCCAGAAAGAGTGCAAGAAATTTTATCGCTAGGCCAAGAACGAAAACTGGTGACAGTATTAACTGGCAATGGCTCATCACCCAGATTCACAAAACAGGTGCTGATAGGAGGTAGTAGTCTTCCTATCAGAGTTCGGAGGTAG

Protein sequence

MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELDVLPCCQNNEFNKILAASPSRTVKSQDSAAAMYSSKIDYDDADIYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLTGNGSSPRFTKQVLIGGSSLPIRVRR

Homology

[Close]

BLAST of HG10008963.1 vs. NCBI nr
Match: XP_038874848.1 (SKP1-like protein 21 isoform X2 [Benincasa hispida])

HSP 1 Score: 668.3 bits (1723), Expect = 3.7e-188
Identity = 347/357 (97.20%), Postives = 352/357 (98.60%), Query Frame = 0


Query: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60
           MKSYIWLQTADGSIQQVEEEVA FCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL
Sbjct: 13  MKSYIWLQTADGSIQQVEEEVATFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 72

Query: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120
           DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG
Sbjct: 73  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 132

Query: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180
           KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE
Sbjct: 133 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 192

Query: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELD 240
           ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSS+NENGNHDKIGELD
Sbjct: 193 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSSNENGNHDKIGELD 252

Query: 241 VLP-CCQNNEFNKILAASPSRTVKSQDSAAAMYSSKIDYDDADIYDDLDPAMKEELDREV 300
            LP CCQNNEFNKIL ASPSRTVKSQDSAAAMY+SKI++DDADIYDDLDPAMKEELDREV
Sbjct: 253 ALPSCCQNNEFNKILGASPSRTVKSQDSAAAMYASKIEFDDADIYDDLDPAMKEELDREV 312

Query: 301 EDFARRLNSDWPERVQEILSLGQERKLVTVLTGNGSSPRFTKQVLIGGSSLPIRVRR 357
           EDFARRLNSDWPERVQEILSLGQER LVTVLTGNGSSPRFTKQVLIGGSSLP+RVRR
Sbjct: 313 EDFARRLNSDWPERVQEILSLGQERNLVTVLTGNGSSPRFTKQVLIGGSSLPVRVRR 369

[Close]

BLAST of HG10008963.1 vs. NCBI nr
Match: XP_008437512.1 (PREDICTED: SKP1-like protein 21 isoform X1 [Cucumis melo] >XP_008437513.1 PREDICTED: SKP1-like protein 21 isoform X1 [Cucumis melo])

HSP 1 Score: 661.4 bits (1705), Expect = 4.5e-186
Identity = 347/358 (96.93%), Postives = 351/358 (98.04%), Query Frame = 0


Query: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60
           MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL
Sbjct: 13  MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 72

Query: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120
           DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG
Sbjct: 73  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 132

Query: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180
           KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE
Sbjct: 133 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 192

Query: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSS-TNENGNHDKIGEL 240
           ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSS TNENGNHDKI EL
Sbjct: 193 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTTNENGNHDKIEEL 252

Query: 241 DVLP-CCQNNEFNKILAASPSRTVKSQDSAAAMYSSKIDYDDADIYDDLDPAMKEELDRE 300
           D LP CCQNNEFNKIL ASPSRTVKSQDSAAAMYSSKI++DDADIYDDLDPAMKEELDRE
Sbjct: 253 DALPSCCQNNEFNKILGASPSRTVKSQDSAAAMYSSKIEFDDADIYDDLDPAMKEELDRE 312

Query: 301 VEDFARRLNSDWPERVQEILSLGQERKLVTVLTGNGSSPRFTKQVLIGGSSLPIRVRR 357
           VEDFARRLNSDWPERVQEILSLGQER LVTVLTGNGSSPRFTKQVLIGGSSLP+ V+R
Sbjct: 313 VEDFARRLNSDWPERVQEILSLGQERNLVTVLTGNGSSPRFTKQVLIGGSSLPVGVQR 370

[Close]

BLAST of HG10008963.1 vs. NCBI nr
Match: XP_022158934.1 (SKP1-like protein 21 isoform X1 [Momordica charantia])

HSP 1 Score: 659.8 bits (1701), Expect = 1.3e-185
Identity = 343/356 (96.35%), Postives = 347/356 (97.47%), Query Frame = 0


Query: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60
           MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL
Sbjct: 13  MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 72

Query: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120
           DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG
Sbjct: 73  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 132

Query: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180
           KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE
Sbjct: 133 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 192

Query: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELD 240
           ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELD
Sbjct: 193 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELD 252

Query: 241 VLPCCQNNEFNKILAASPSRTVKSQDSAAAMYSSKIDYDDADIYDDLDPAMKEELDREVE 300
            LP C+ NE NKIL ASPSRTVKSQDSAAA+YS KI++DD DIYDDLDPAMKEELDREVE
Sbjct: 253 ALPSCRQNECNKILGASPSRTVKSQDSAAAIYSPKIEFDDGDIYDDLDPAMKEELDREVE 312

Query: 301 DFARRLNSDWPERVQEILSLGQERKLVTVLTGNGSSPRFTKQVLIGGSSLPIRVRR 357
           DFARRLNSDWPERVQEILSLGQERKLVTVL GNGSSPRFTKQVLIGGSSLPI VRR
Sbjct: 313 DFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSPRFTKQVLIGGSSLPIGVRR 368

[Close]

BLAST of HG10008963.1 vs. NCBI nr
Match: XP_022158945.1 (SKP1-like protein 21 isoform X3 [Momordica charantia])

HSP 1 Score: 659.8 bits (1701), Expect = 1.3e-185
Identity = 343/356 (96.35%), Postives = 347/356 (97.47%), Query Frame = 0


Query: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60
           MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL
Sbjct: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60

Query: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120
           DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG
Sbjct: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120

Query: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180
           KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE
Sbjct: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180

Query: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELD 240
           ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELD
Sbjct: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELD 240

Query: 241 VLPCCQNNEFNKILAASPSRTVKSQDSAAAMYSSKIDYDDADIYDDLDPAMKEELDREVE 300
            LP C+ NE NKIL ASPSRTVKSQDSAAA+YS KI++DD DIYDDLDPAMKEELDREVE
Sbjct: 241 ALPSCRQNECNKILGASPSRTVKSQDSAAAIYSPKIEFDDGDIYDDLDPAMKEELDREVE 300

Query: 301 DFARRLNSDWPERVQEILSLGQERKLVTVLTGNGSSPRFTKQVLIGGSSLPIRVRR 357
           DFARRLNSDWPERVQEILSLGQERKLVTVL GNGSSPRFTKQVLIGGSSLPI VRR
Sbjct: 301 DFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSPRFTKQVLIGGSSLPIGVRR 356

[Close]

BLAST of HG10008963.1 vs. NCBI nr
Match: XP_011654651.1 (SKP1-like protein 21 isoform X1 [Cucumis sativus] >XP_031742131.1 SKP1-like protein 21 isoform X1 [Cucumis sativus])

HSP 1 Score: 659.8 bits (1701), Expect = 1.3e-185
Identity = 346/358 (96.65%), Postives = 351/358 (98.04%), Query Frame = 0


Query: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60
           MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL
Sbjct: 13  MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 72

Query: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120
           DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG
Sbjct: 73  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 132

Query: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180
           KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE
Sbjct: 133 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 192

Query: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSS-TNENGNHDKIGEL 240
           ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSS TNENGNHDKI EL
Sbjct: 193 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTTNENGNHDKIEEL 252

Query: 241 DVLP-CCQNNEFNKILAASPSRTVKSQDSAAAMYSSKIDYDDADIYDDLDPAMKEELDRE 300
           D LP CCQNNEFN+IL ASPSRTVKSQDSAAAMYSSKI++DDADIYDDLDPAMKEELDRE
Sbjct: 253 DALPSCCQNNEFNQILGASPSRTVKSQDSAAAMYSSKIEFDDADIYDDLDPAMKEELDRE 312

Query: 301 VEDFARRLNSDWPERVQEILSLGQERKLVTVLTGNGSSPRFTKQVLIGGSSLPIRVRR 357
           VEDFARRLNSDWPERVQEILSLGQER LVTVLTGNGSSPRFTKQVLIGGSSLP+ V+R
Sbjct: 313 VEDFARRLNSDWPERVQEILSLGQERNLVTVLTGNGSSPRFTKQVLIGGSSLPVGVQR 370

[Close]

BLAST of HG10008963.1 vs. ExPASy Swiss-Prot
Match: Q8LF97 (SKP1-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=ASK21 PE=2 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 3.9e-116
Identity = 231/341 (67.74%), Postives = 270/341 (79.18%), Query Frame = 0


Query: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60
           MKSYIWL+TADGSIQQVE+EVAMFCPMIC+E++Q G+GSSKNYAISLPQRVNPA+L LI 
Sbjct: 14  MKSYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIF 73

Query: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120
           DYCRFHQVPGRSNKERK +DEKFIRMDTK+LCELTSAADSLQLKPLVDLTSRALARIIEG
Sbjct: 74  DYCRFHQVPGRSNKERKVYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEG 133

Query: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180
           KTPEEIRE FHLPDDLTEEEKLEPL+N  DDPRIRLLNRLYA+KRKEL+EREKLK+VE+E
Sbjct: 134 KTPEEIREIFHLPDDLTEEEKLEPLKNTMDDPRIRLLNRLYAKKRKELKEREKLKSVEVE 193

Query: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELD 240
           E VD+RSVDDLLSFING   D K VKT+K+KKKN++RK+Q+  SS+         +  LD
Sbjct: 194 EHVDERSVDDLLSFING--RDPKVVKTSKSKKKNKKRKEQKNGSSNGTCEALEKDLHNLD 253

Query: 241 VLPCCQNNEFNKILAASPSRTVKSQDSAAAMYSSKIDYDDADIYDDLDPAMKEELDREVE 300
                Q+ E     A+              +++ K +++D  I D++DPA+KE LDREVE
Sbjct: 254 --SKSQSAEIVDNTASCLGDVSNLPSMEDDIFTPKTEFEDGYIDDEIDPALKELLDREVE 313

Query: 301 DFARRLNSDWPERVQEILSLGQERKLVTV-LTGNGSSPRFT 341
           DFARRLNS W      +LS+GQER+ V   + GNG+S R T
Sbjct: 314 DFARRLNSSW------VLSIGQERQPVNFSINGNGTSRRLT 344

[Close]

BLAST of HG10008963.1 vs. ExPASy Swiss-Prot
Match: A8MQG7 (SKP1-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=ASK20 PE=2 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 6.8e-113
Identity = 232/347 (66.86%), Postives = 270/347 (77.81%), Query Frame = 0


Query: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60
           MKSYIWLQTADGSIQQVE+EVAMFCPMIC+E++Q G+GSSKN+AISLPQRVNPA+  LIL
Sbjct: 14  MKSYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLIL 73

Query: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120
           DYCRFHQ+PGRSNKERKT+DE+FIRMDTK+LCELTSAADSLQLKPLVDLTSRALARIIEG
Sbjct: 74  DYCRFHQLPGRSNKERKTYDERFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEG 133

Query: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180
           K PEEIRE FHLPDDLTEEEKLEPL+N  DDPRIRLLNRLYA+KRKEL+ERE+LKNVE+E
Sbjct: 134 KNPEEIREIFHLPDDLTEEEKLEPLKNSMDDPRIRLLNRLYAKKRKELKERERLKNVEVE 193

Query: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIG-EL 240
           E VD+RSVDDLLSFING   D KAVK +K KKK +++KDQ+  SS    N  HDK   +L
Sbjct: 194 EHVDERSVDDLLSFING--RDHKAVKMSKGKKKKKKKKDQKIVSS----NNIHDKESHDL 253

Query: 241 DVLPCCQNNEFNKILAASPSRTVKSQDSAAAMYSSKIDYDDADIYDDLDPAMKEELDREV 300
                C   E    +   P+      D +     S    +D DI D++DPAM+E LDREV
Sbjct: 254 RSKQQCV-EEIGSSMREVPNLLSAEDDISTPNAGS----EDEDIDDEIDPAMRELLDREV 313

Query: 301 EDFARRLNSDWPERVQEILSLGQERKLVTV-LTGNGSSPRFTKQVLI 346
           EDFA+RLNS+W      + SLG+ER+ V   + GNG++ R T  V I
Sbjct: 314 EDFAQRLNSNW------VRSLGKERRPVHFSINGNGTTRRHTGMVSI 343

[Close]

BLAST of HG10008963.1 vs. ExPASy Swiss-Prot
Match: Q3ZCF3 (S-phase kinase-associated protein 1 OS=Bos taurus OX=9913 GN=SKP1 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 4.6e-16
Identity = 55/150 (36.67%), Postives = 89/150 (59.33%), Query Frame = 0


Query: 5   IWLQTADGSIQQVEEEVAMFCPMICREILQTGM-GSSKNYAISLPQRVNPAILGLILDYC 64
           I LQ++DG I +V+ E+A     I   +   GM     +  + LP  VN AIL  ++ +C
Sbjct: 4   IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLP-NVNAAILKKVIQWC 63

Query: 65  RFHQ-----VPGRSNKERKT-----FDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 124
             H+          NKE++T     +D++F+++D   L EL  AA+ L +K L+D+T + 
Sbjct: 64  THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 123

Query: 125 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 144
           +A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 124 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152

[Close]

BLAST of HG10008963.1 vs. ExPASy Swiss-Prot
Match: P63209 (S-phase kinase-associated protein 1 OS=Cavia porcellus OX=10141 GN=SKP1 PE=2 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 4.6e-16
Identity = 55/150 (36.67%), Postives = 89/150 (59.33%), Query Frame = 0


Query: 5   IWLQTADGSIQQVEEEVAMFCPMICREILQTGM-GSSKNYAISLPQRVNPAILGLILDYC 64
           I LQ++DG I +V+ E+A     I   +   GM     +  + LP  VN AIL  ++ +C
Sbjct: 4   IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLP-NVNAAILKKVIQWC 63

Query: 65  RFHQ-----VPGRSNKERKT-----FDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 124
             H+          NKE++T     +D++F+++D   L EL  AA+ L +K L+D+T + 
Sbjct: 64  THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 123

Query: 125 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 144
           +A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 124 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152

[Close]

BLAST of HG10008963.1 vs. ExPASy Swiss-Prot
Match: Q5ZKF5 (S-phase kinase-associated protein 1 OS=Gallus gallus OX=9031 GN=SKP1 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 4.6e-16
Identity = 55/150 (36.67%), Postives = 89/150 (59.33%), Query Frame = 0


Query: 5   IWLQTADGSIQQVEEEVAMFCPMICREILQTGM-GSSKNYAISLPQRVNPAILGLILDYC 64
           I LQ++DG I +V+ E+A     I   +   GM     +  + LP  VN AIL  ++ +C
Sbjct: 4   IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLP-NVNAAILKKVIQWC 63

Query: 65  RFHQ-----VPGRSNKERKT-----FDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRA 124
             H+          NKE++T     +D++F+++D   L EL  AA+ L +K L+D+T + 
Sbjct: 64  THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 123

Query: 125 LARIIEGKTPEEIRETFHLPDDLTEEEKLE 144
           +A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 124 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152

[Close]

BLAST of HG10008963.1 vs. ExPASy TrEMBL
Match: A0A1S3AU79 (SKP1-like protein 21 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482906 PE=3 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 2.2e-186
Identity = 347/358 (96.93%), Postives = 351/358 (98.04%), Query Frame = 0


Query: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60
           MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL
Sbjct: 13  MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 72

Query: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120
           DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG
Sbjct: 73  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 132

Query: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180
           KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE
Sbjct: 133 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 192

Query: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSS-TNENGNHDKIGEL 240
           ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSS TNENGNHDKI EL
Sbjct: 193 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTTNENGNHDKIEEL 252

Query: 241 DVLP-CCQNNEFNKILAASPSRTVKSQDSAAAMYSSKIDYDDADIYDDLDPAMKEELDRE 300
           D LP CCQNNEFNKIL ASPSRTVKSQDSAAAMYSSKI++DDADIYDDLDPAMKEELDRE
Sbjct: 253 DALPSCCQNNEFNKILGASPSRTVKSQDSAAAMYSSKIEFDDADIYDDLDPAMKEELDRE 312

Query: 301 VEDFARRLNSDWPERVQEILSLGQERKLVTVLTGNGSSPRFTKQVLIGGSSLPIRVRR 357
           VEDFARRLNSDWPERVQEILSLGQER LVTVLTGNGSSPRFTKQVLIGGSSLP+ V+R
Sbjct: 313 VEDFARRLNSDWPERVQEILSLGQERNLVTVLTGNGSSPRFTKQVLIGGSSLPVGVQR 370

[Close]

BLAST of HG10008963.1 vs. ExPASy TrEMBL
Match: A0A0A0KM48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G141080 PE=3 SV=1)

HSP 1 Score: 659.8 bits (1701), Expect = 6.3e-186
Identity = 346/358 (96.65%), Postives = 351/358 (98.04%), Query Frame = 0


Query: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60
           MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL
Sbjct: 13  MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 72

Query: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120
           DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG
Sbjct: 73  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 132

Query: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180
           KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE
Sbjct: 133 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 192

Query: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSS-TNENGNHDKIGEL 240
           ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSS TNENGNHDKI EL
Sbjct: 193 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTTNENGNHDKIEEL 252

Query: 241 DVLP-CCQNNEFNKILAASPSRTVKSQDSAAAMYSSKIDYDDADIYDDLDPAMKEELDRE 300
           D LP CCQNNEFN+IL ASPSRTVKSQDSAAAMYSSKI++DDADIYDDLDPAMKEELDRE
Sbjct: 253 DALPSCCQNNEFNQILGASPSRTVKSQDSAAAMYSSKIEFDDADIYDDLDPAMKEELDRE 312

Query: 301 VEDFARRLNSDWPERVQEILSLGQERKLVTVLTGNGSSPRFTKQVLIGGSSLPIRVRR 357
           VEDFARRLNSDWPERVQEILSLGQER LVTVLTGNGSSPRFTKQVLIGGSSLP+ V+R
Sbjct: 313 VEDFARRLNSDWPERVQEILSLGQERNLVTVLTGNGSSPRFTKQVLIGGSSLPVGVQR 370

[Close]

BLAST of HG10008963.1 vs. ExPASy TrEMBL
Match: A0A6J1DX90 (SKP1-like protein 21 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111025387 PE=3 SV=1)

HSP 1 Score: 659.8 bits (1701), Expect = 6.3e-186
Identity = 343/356 (96.35%), Postives = 347/356 (97.47%), Query Frame = 0


Query: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60
           MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL
Sbjct: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60

Query: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120
           DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG
Sbjct: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120

Query: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180
           KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE
Sbjct: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180

Query: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELD 240
           ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELD
Sbjct: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELD 240

Query: 241 VLPCCQNNEFNKILAASPSRTVKSQDSAAAMYSSKIDYDDADIYDDLDPAMKEELDREVE 300
            LP C+ NE NKIL ASPSRTVKSQDSAAA+YS KI++DD DIYDDLDPAMKEELDREVE
Sbjct: 241 ALPSCRQNECNKILGASPSRTVKSQDSAAAIYSPKIEFDDGDIYDDLDPAMKEELDREVE 300

Query: 301 DFARRLNSDWPERVQEILSLGQERKLVTVLTGNGSSPRFTKQVLIGGSSLPIRVRR 357
           DFARRLNSDWPERVQEILSLGQERKLVTVL GNGSSPRFTKQVLIGGSSLPI VRR
Sbjct: 301 DFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSPRFTKQVLIGGSSLPIGVRR 356

[Close]

BLAST of HG10008963.1 vs. ExPASy TrEMBL
Match: A0A6J1E0W6 (SKP1-like protein 21 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025387 PE=3 SV=1)

HSP 1 Score: 659.8 bits (1701), Expect = 6.3e-186
Identity = 343/356 (96.35%), Postives = 347/356 (97.47%), Query Frame = 0


Query: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60
           MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL
Sbjct: 13  MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 72

Query: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120
           DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG
Sbjct: 73  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 132

Query: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180
           KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE
Sbjct: 133 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 192

Query: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELD 240
           ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELD
Sbjct: 193 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELD 252

Query: 241 VLPCCQNNEFNKILAASPSRTVKSQDSAAAMYSSKIDYDDADIYDDLDPAMKEELDREVE 300
            LP C+ NE NKIL ASPSRTVKSQDSAAA+YS KI++DD DIYDDLDPAMKEELDREVE
Sbjct: 253 ALPSCRQNECNKILGASPSRTVKSQDSAAAIYSPKIEFDDGDIYDDLDPAMKEELDREVE 312

Query: 301 DFARRLNSDWPERVQEILSLGQERKLVTVLTGNGSSPRFTKQVLIGGSSLPIRVRR 357
           DFARRLNSDWPERVQEILSLGQERKLVTVL GNGSSPRFTKQVLIGGSSLPI VRR
Sbjct: 313 DFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSPRFTKQVLIGGSSLPIGVRR 368

[Close]

BLAST of HG10008963.1 vs. ExPASy TrEMBL
Match: A0A6J1E2N5 (SKP1-like protein 21 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430276 PE=3 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 9.1e-185
Identity = 342/357 (95.80%), Postives = 348/357 (97.48%), Query Frame = 0


Query: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60
           MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL
Sbjct: 13  MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 72

Query: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120
           DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG
Sbjct: 73  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 132

Query: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180
           KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE
Sbjct: 133 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 192

Query: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELD 240
           ERVDDRSVDDLLSFINGGDGDSKAVK NKNKKKNRRRKDQQKDSSSTNENGNHDKI ELD
Sbjct: 193 ERVDDRSVDDLLSFINGGDGDSKAVKANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELD 252

Query: 241 VLP-CCQNNEFNKILAASPSRTVKSQDSAAAMYSSKIDYDDADIYDDLDPAMKEELDREV 300
            LP CCQNNEF+KI  ASPSRTVKSQDSA ++YSSKI++DDAD+YDDLDPAMKEELDREV
Sbjct: 253 ALPSCCQNNEFDKISGASPSRTVKSQDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREV 312

Query: 301 EDFARRLNSDWPERVQEILSLGQERKLVTVLTGNGSSPRFTKQVLIGGSSLPIRVRR 357
           EDFARRLNSDWPERVQEILSLGQERKLVTVL GNGSS RFTKQVLIGGSSLPIRVRR
Sbjct: 313 EDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSTRFTKQVLIGGSSLPIRVRR 369

[Close]

BLAST of HG10008963.1 vs. TAIR 10
Match: AT3G61415.1 (SKP1-like 21 )

HSP 1 Score: 419.5 bits (1077), Expect = 2.8e-117
Identity = 231/341 (67.74%), Postives = 270/341 (79.18%), Query Frame = 0


Query: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60
           MKSYIWL+TADGSIQQVE+EVAMFCPMIC+E++Q G+GSSKNYAISLPQRVNPA+L LI 
Sbjct: 14  MKSYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIF 73

Query: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120
           DYCRFHQVPGRSNKERK +DEKFIRMDTK+LCELTSAADSLQLKPLVDLTSRALARIIEG
Sbjct: 74  DYCRFHQVPGRSNKERKVYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEG 133

Query: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180
           KTPEEIRE FHLPDDLTEEEKLEPL+N  DDPRIRLLNRLYA+KRKEL+EREKLK+VE+E
Sbjct: 134 KTPEEIREIFHLPDDLTEEEKLEPLKNTMDDPRIRLLNRLYAKKRKELKEREKLKSVEVE 193

Query: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELD 240
           E VD+RSVDDLLSFING   D K VKT+K+KKKN++RK+Q+  SS+         +  LD
Sbjct: 194 EHVDERSVDDLLSFING--RDPKVVKTSKSKKKNKKRKEQKNGSSNGTCEALEKDLHNLD 253

Query: 241 VLPCCQNNEFNKILAASPSRTVKSQDSAAAMYSSKIDYDDADIYDDLDPAMKEELDREVE 300
                Q+ E     A+              +++ K +++D  I D++DPA+KE LDREVE
Sbjct: 254 --SKSQSAEIVDNTASCLGDVSNLPSMEDDIFTPKTEFEDGYIDDEIDPALKELLDREVE 313

Query: 301 DFARRLNSDWPERVQEILSLGQERKLVTV-LTGNGSSPRFT 341
           DFARRLNS W      +LS+GQER+ V   + GNG+S R T
Sbjct: 314 DFARRLNSSW------VLSIGQERQPVNFSINGNGTSRRLT 344

[Close]

BLAST of HG10008963.1 vs. TAIR 10
Match: AT3G61415.2 (SKP1-like 21 )

HSP 1 Score: 419.5 bits (1077), Expect = 2.8e-117
Identity = 231/342 (67.54%), Postives = 271/342 (79.24%), Query Frame = 0


Query: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60
           MKSYIWL+TADGSIQQVE+EVAMFCPMIC+E++Q G+GSSKNYAISLPQRVNPA+L LI 
Sbjct: 14  MKSYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIF 73

Query: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120
           DYCRFHQVPGRSNKERK +DEKFIRMDTK+LCELTSAADSLQLKPLVDLTSRALARIIEG
Sbjct: 74  DYCRFHQVPGRSNKERKVYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEG 133

Query: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180
           KTPEEIRE FHLPDDLTEEEKLEPL+N  DDPRIRLLNRLYA+KRKEL+EREKLK+VE+E
Sbjct: 134 KTPEEIREIFHLPDDLTEEEKLEPLKNTMDDPRIRLLNRLYAKKRKELKEREKLKSVEVE 193

Query: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIGELD 240
           E VD+RSVDDLLSFING   D K VKT+K+KKKN++RK+Q+  SS+         +  LD
Sbjct: 194 EHVDERSVDDLLSFING--RDPKVVKTSKSKKKNKKRKEQKNGSSNGTCEALEKDLHNLD 253

Query: 241 VLPCCQNNEFNKILAASPSRTVKSQDSAAAMYSSKIDYDDADIYDDLDPAMKEELDREVE 300
                Q+ E     A+              +++ K +++D  I D++DPA+KE LDREVE
Sbjct: 254 --SKSQSAEIVDNTASCLGDVSNLPSMEDDIFTPKTEFEDGYIDDEIDPALKELLDREVE 313

Query: 301 DFARRLNSDWPERVQEILSLGQERKLVTV-LTGNGSSPRFTK 342
           DFARRLNS W      +LS+GQER+ V   + GNG+S R T+
Sbjct: 314 DFARRLNSSW------VLSIGQERQPVNFSINGNGTSRRLTE 345

[Close]

BLAST of HG10008963.1 vs. TAIR 10
Match: AT2G45950.2 (SKP1-like 20 )

HSP 1 Score: 408.7 bits (1049), Expect = 4.9e-114
Identity = 232/347 (66.86%), Postives = 270/347 (77.81%), Query Frame = 0


Query: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60
           MKSYIWLQTADGSIQQVE+EVAMFCPMIC+E++Q G+GSSKN+AISLPQRVNPA+  LIL
Sbjct: 14  MKSYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLIL 73

Query: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120
           DYCRFHQ+PGRSNKERKT+DE+FIRMDTK+LCELTSAADSLQLKPLVDLTSRALARIIEG
Sbjct: 74  DYCRFHQLPGRSNKERKTYDERFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEG 133

Query: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180
           K PEEIRE FHLPDDLTEEEKLEPL+N  DDPRIRLLNRLYA+KRKEL+ERE+LKNVE+E
Sbjct: 134 KNPEEIREIFHLPDDLTEEEKLEPLKNSMDDPRIRLLNRLYAKKRKELKERERLKNVEVE 193

Query: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIG-EL 240
           E VD+RSVDDLLSFING   D KAVK +K KKK +++KDQ+  SS    N  HDK   +L
Sbjct: 194 EHVDERSVDDLLSFING--RDHKAVKMSKGKKKKKKKKDQKIVSS----NNIHDKESHDL 253

Query: 241 DVLPCCQNNEFNKILAASPSRTVKSQDSAAAMYSSKIDYDDADIYDDLDPAMKEELDREV 300
                C   E    +   P+      D +     S    +D DI D++DPAM+E LDREV
Sbjct: 254 RSKQQCV-EEIGSSMREVPNLLSAEDDISTPNAGS----EDEDIDDEIDPAMRELLDREV 313

Query: 301 EDFARRLNSDWPERVQEILSLGQERKLVTV-LTGNGSSPRFTKQVLI 346
           EDFA+RLNS+W      + SLG+ER+ V   + GNG++ R T  V I
Sbjct: 314 EDFAQRLNSNW------VRSLGKERRPVHFSINGNGTTRRHTGMVSI 343

[Close]

BLAST of HG10008963.1 vs. TAIR 10
Match: AT2G45950.1 (SKP1-like 20 )

HSP 1 Score: 408.3 bits (1048), Expect = 6.3e-114
Identity = 231/344 (67.15%), Postives = 269/344 (78.20%), Query Frame = 0


Query: 1   MKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLIL 60
           MKSYIWLQTADGSIQQVE+EVAMFCPMIC+E++Q G+GSSKN+AISLPQRVNPA+  LIL
Sbjct: 14  MKSYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLIL 73

Query: 61  DYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEG 120
           DYCRFHQ+PGRSNKERKT+DE+FIRMDTK+LCELTSAADSLQLKPLVDLTSRALARIIEG
Sbjct: 74  DYCRFHQLPGRSNKERKTYDERFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEG 133

Query: 121 KTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIE 180
           K PEEIRE FHLPDDLTEEEKLEPL+N  DDPRIRLLNRLYA+KRKEL+ERE+LKNVE+E
Sbjct: 134 KNPEEIREIFHLPDDLTEEEKLEPLKNSMDDPRIRLLNRLYAKKRKELKERERLKNVEVE 193

Query: 181 ERVDDRSVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTNENGNHDKIG-EL 240
           E VD+RSVDDLLSFING   D KAVK +K KKK +++KDQ+  SS    N  HDK   +L
Sbjct: 194 EHVDERSVDDLLSFING--RDHKAVKMSKGKKKKKKKKDQKIVSS----NNIHDKESHDL 253

Query: 241 DVLPCCQNNEFNKILAASPSRTVKSQDSAAAMYSSKIDYDDADIYDDLDPAMKEELDREV 300
                C   E    +   P+      D +     S    +D DI D++DPAM+E LDREV
Sbjct: 254 RSKQQCV-EEIGSSMREVPNLLSAEDDISTPNAGS----EDEDIDDEIDPAMRELLDREV 313

Query: 301 EDFARRLNSDWPERVQEILSLGQERKLVTV-LTGNGSSPRFTKQ 343
           EDFA+RLNS+W      + SLG+ER+ V   + GNG++ R T Q
Sbjct: 314 EDFAQRLNSNW------VRSLGKERRPVHFSINGNGTTRRHTGQ 340

[Close]

BLAST of HG10008963.1 vs. TAIR 10
Match: AT3G21850.1 (SKP1-like 9 )

HSP 1 Score: 86.7 bits (213), Expect = 4.2e-17
Identity = 52/140 (37.14%), Postives = 80/140 (57.14%), Query Frame = 0


Query: 5   IWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLPQRVNPAILGLILDYCR 64
           I L+++DG   +VEEE A  C +I   I         +  I LP  V   IL ++++YC 
Sbjct: 6   IILKSSDGHSFEVEEEAARQCQII---IAHMSENDCTDNGIPLP-NVTGKILAMVIEYCN 65

Query: 65  FHQVPGR---SNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGK 124
            H V      S+ + K +D++F+  DT  + +L  AA+ L +K L DL  + +A II+G 
Sbjct: 66  KHHVDAANPCSDDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGN 125

Query: 125 TPEEIRETFHLPDDLTEEEK 142
           TPE+IRE F++ +DLT EE+
Sbjct: 126 TPEQIREFFNIENDLTPEEE 141

The following BLAST results are available for this feature:

BLAST of HG10008963.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874848.1	3.7e-188	97.20	SKP1-like protein 21 isoform X2 [Benincasa hispida]	[more]
XP_008437512.1	4.5e-186	96.93	PREDICTED: SKP1-like protein 21 isoform X1 [Cucumis melo] >XP_008437513.1 PREDIC...	[more]
XP_022158934.1	1.3e-185	96.35	SKP1-like protein 21 isoform X1 [Momordica charantia]	[more]
XP_022158945.1	1.3e-185	96.35	SKP1-like protein 21 isoform X3 [Momordica charantia]	[more]
XP_011654651.1	1.3e-185	96.65	SKP1-like protein 21 isoform X1 [Cucumis sativus] >XP_031742131.1 SKP1-like prot...	[more]

BLAST of HG10008963.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LF97	3.9e-116	67.74	SKP1-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=ASK21 PE=2 SV=1	[more]
A8MQG7	6.8e-113	66.86	SKP1-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=ASK20 PE=2 SV=1	[more]
Q3ZCF3	4.6e-16	36.67	S-phase kinase-associated protein 1 OS=Bos taurus OX=9913 GN=SKP1 PE=2 SV=1	[more]
P63209	4.6e-16	36.67	S-phase kinase-associated protein 1 OS=Cavia porcellus OX=10141 GN=SKP1 PE=2 SV=...	[more]
Q5ZKF5	4.6e-16	36.67	S-phase kinase-associated protein 1 OS=Gallus gallus OX=9031 GN=SKP1 PE=2 SV=1	[more]

BLAST of HG10008963.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AU79	2.2e-186	96.93	SKP1-like protein 21 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482906 PE=3 SV=...	[more]
A0A0A0KM48	6.3e-186	96.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G141080 PE=3 SV=1	[more]
A0A6J1DX90	6.3e-186	96.35	SKP1-like protein 21 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111025387 P...	[more]
A0A6J1E0W6	6.3e-186	96.35	SKP1-like protein 21 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025387 P...	[more]
A0A6J1E2N5	9.1e-185	95.80	SKP1-like protein 21 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430276 PE...	[more]

BLAST of HG10008963.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61415.1	2.8e-117	67.74	SKP1-like 21	[more]
AT3G61415.2	2.8e-117	67.54	SKP1-like 21	[more]
AT2G45950.2	4.9e-114	66.86	SKP1-like 20	[more]
AT2G45950.1	6.3e-114	67.15	SKP1-like 20	[more]
AT3G21850.1	4.2e-17	37.14	SKP1-like 9	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 157..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..236
None	No IPR available	PANTHER	PTHR11165:SF140	OS03G0107000 PROTEIN	coord: 1..253
IPR001232	S-phase kinase-associated protein 1-like	SMART	SM00512	skp1_3	coord: 2..103 e-value: 3.2E-23 score: 93.1
IPR016072	SKP1 component, dimerisation	PFAM	PF01466	Skp1	coord: 104..141 e-value: 6.4E-13 score: 48.5
IPR016073	SKP1 component, POZ domain	PFAM	PF03931	Skp1_POZ	coord: 5..67 e-value: 1.7E-5 score: 24.9
IPR011333	SKP1/BTB/POZ domain superfamily	GENE3D	3.30.710.10	Potassium Channel Kv1.1; Chain A	coord: 1..148 e-value: 8.8E-33 score: 115.6
IPR011333	SKP1/BTB/POZ domain superfamily	SUPERFAMILY	54695	POZ domain	coord: 3..67
IPR016897	S-phase kinase-associated protein 1	PANTHER	PTHR11165	SKP1	coord: 1..253
IPR036296	SKP1-like, dimerisation domain superfamily	SUPERFAMILY	81382	Skp1 dimerisation domain-like	coord: 78..145

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10008963	HG10008963	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10008963.1-cds	HG10008963.1-cds-Chr06:1127265..1127314	CDS
HG10008963.1-cds	HG10008963.1-cds-Chr06:1127617..1127747	CDS
HG10008963.1-cds	HG10008963.1-cds-Chr06:1128933..1129111	CDS
HG10008963.1-cds	HG10008963.1-cds-Chr06:1129242..1129351	CDS
HG10008963.1-cds	HG10008963.1-cds-Chr06:1129619..1129694	CDS
HG10008963.1-cds	HG10008963.1-cds-Chr06:1130016..1130126	CDS
HG10008963.1-cds	HG10008963.1-cds-Chr06:1130221..1130412	CDS
HG10008963.1-cds	HG10008963.1-cds-Chr06:1130551..1130772	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10008963.1	HG10008963.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0097602	cullin family protein binding