HG10008820.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008820.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Heme exporter protein C
Location	Chr06: 65421 .. 70356 (+)
Sequence length	1560
RNA-Seq Expression	HG10008820.1
Synteny	HG10008820.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACAGAGGAACAGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTGAAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTCCGCATTACTCATTTTAAAGTTTCCCACGGTGATCTAATATCTTTTCAAGAAAATGACGCGAGAATCCGCGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGAAAAAATCATAGGCAAATTCCTGGATCACCCGGTAAGAATGTGGAGAAGAACTAAAACAGAATGGTTCCACCTACTCAAAACTAAGAGGGGATGCCGCCTACTACTAAAATCCCGGTTTTTGCAACAGTTGCGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAACAGAATGAAGAGGAATTTGTATCATTTGAAATCCCTATTCTTATCGAATAGAAGGAACGAGAAAAACCGAAATCTTCCTACTCGAACAAGAAGTCCTATAGTTGACAACTCTTCTTTATATAGTAATTCGACCTATTGCTCCGCATCCCCCCATCAGTTTACTATGAAGAGAAAAATCAAAAGGATCGAACTACCTACTCATTATTCGGAGGTGAATCATAGAACACTAAAAGCTGTGGTATCTTATGGACCTAACATAGGTCACATCCCTCACGACATAAGATTGAAAGATCCAAACCTTCCTCTTCGGAGCGGAAACGGACGTGGCCAAAACATCTAAAGTAAAGATCGGCGTAGTCGCTCATAGGGACATATCTATCCGTCTCGAGTCTCGTCTAGATCGATTCATAGATCGATTTCTATCCATATGTATCGGTATCTCCGTGGATAGAGATAAAGATAGGGAGTGAATCAAAAAGCGTGACGAGAATTCTCAACTCGAAATGCAGCGGGAAGAATTCGTCAACCTAACTTCGAACCTGGTTTCCTACATAGAACGAAGCCACGATGAAAGCCTTAAGCGAGAGACTCTGCATTCGCTGGACGGCCAGTATTGATGGGAGTGTAGGAAACCTCCTACAGGAACGGGGTCTCGAAATTCCCGATAACAGGACACTTCCGGAGATATCATCTTCGCTCATCGGGGAGGCCGGAAATGAAATAATGTTTCTTATCTCAACGATATAATTCGCGATCTGGGGGGGACACCCCAGTCGACACGTCATGGTTTTTAAATGACGTGATCGACTTCATCCAAGTGGTTGGATGTTATAGTGTCTGTACCTTCCAAAATTTGATGGAAGTTTATGAAACGTGAAATCAAAGTGCTAAAGCACGAACCCCCATTACTGATGGACAAATCTGTTTGGATCGATAGATCTACTTTAACATTTGAATTTCTCTGACATTCTACGTTCCCGAAACGGATCCTATCAAATATTTCACATTTTCTATGATCATCTCTATTTTAGGTATTCGGGGAATCCTCCTTAATAGACGAAATATTCCTATTATGTCAATGCCAATTGAATCAATGTTATTAGCTGTGAATTCGAACTTTTTGGTATTTTCCGTTTCTTCGGATGATATGATGGGTCAATCATTTGCTTCATTGGTTCCAACGGTGGCAGCTGCGGAATCCGCTATTGGGTTAGCCATTTTCGTTATTACTTTCCGAGTCCGAGGGACTATTGCTGTAGAATTTATTAATAGCATTCAAGGTTAAACATGACTCCTAGAGAATTACCAAAATACGAAGTTCTCTTCTCCTTAGCACAAGCACTAAGTAAGCAAGCTACCTTTCGTTCTCTTCTTTCTTTTTGATTTGGACTTGGTTGGCAGGGTCAGGGCCTTTCTCGCTGGGCGAGCGCATCCGATTCGAAAGTCCTTTCCTAAACCACTTCCCGTTCAGTTGCTGAAATCTCGAGAAAAGCTTGATAAATGAGATGGAGTTCCACGAATATGCAGGCTAGAAAGATGCTATTTGCTGCTATTCTATCTATTTGTGCATTAAGTTCGAAGAAGATCTCAATCTATAATGAAGAAATGATAGTAGCTCGTTGTTTTATAGGCTTTATTATATTCAGTCGGAAGAGTTTAGGTAATACTTTCAAAGCGACTCTCGACGGGAGAATCCAGGCTATTCAGGAAGAATCGCAGCAATTTCCCAATCCTAACGAAGTAGTTCCTCCGGAATCCAATGAACAACAACGATTACTTAGGATCAGTTTGCGAATTTGTGGCACCGTAGTCGAATCATTACCAATGGCGCGCTATGCGCCTAAGTGCGAAAAGACAGTGCAAGCTTTGTTATGCCGAAACCTAAATGTTAAGTCAGCAACACTTCCAAATGCCACTTCTTCCCGTCGCATCCGTCTTCAGGACGATCTAGTCACAGGTTTTCACTTCTCAGTGAGTGAAAGATTTGTCCCCGGGTGTACGTTGAAAGCTTCTATAGTCGAACTCATTCGAGAGGGCTTGGTGGTCTTAAGAATGGTTCGGGTGGGGGGTTCTCTTAAGAATAAAGAAGACAAATAGAATCGAATTCATGTTCATGCTAACAGAAGAGCGAATCCAATACCAAGACGACTTCTTTCTCAGGAAGTGCAGCAAGTACTTGAGTCATTTTTGGGTATCATGCCCCACGAGTGAGTTGCCAAGTGCCCCCTAGCCTAGAAGGGCAGTCTACCACAAGATCGAGTGGAAGCCTGGAGCCAAACCCCCTTGTTGGGGAGCCCCTGTTTGTTTGATTTATTCCAGAAAAAGCGGTAGCCTTGTGCATTGATTATCGGGCGCTCAACAAGGTAACCTAACCATCAAGAACAAGTATCCACTTTGATTGCGGACTTCTTCGCCCTAATCAATAAACGCGAGATACTTCGAGAAGTTGGATCTACGGTCGGGCAACTACCAAGTGCGTATCGCGGAAGGAGACGAGCCAAAGACGACCTGTGTGACAAGCAAGCAACCTTACTAATAAAGGGGCATTTGATTTGGTTATGCCTTTTGGACTCACCAATGCCCCTGCCACGTTCTGCACCCTCCACAATGAGCTATTCCACCCGTACTTAGACGACTGGTGATATACTTTGATCGTGGGCTATAGCTATTCGTTAAACGACCACGTTAGCCACCTCCGGACCGTAAGGTGGTATTAAGGAAGAATCACCTCTATGTAAAGACGGAGATCCTATTCCTAGGGCATTGGATGAGCATCAGAGCCATCGAGGAGTGGCAAGCACCTACCAAGGTGAGTGAGCTAAGATCGTTTTTAGGGCTCGTGAACTATTACCGAAGATTCATGGTAAGTTACTCGAAGAGGTCTGCTCAACTCAAAAATCTCCTAAACTAAAGAAGGACGTACGGACCGATCATGGCATTTCACTGATCGGAAAAGTGTCAAAGAGCTTTTGAGGACAACAAGCAGGCAGTGATTGATGACTCCGTATTGCAGTTGCCAGATTACACTAAGCCATTTGAAGTACACACGGATGCGTCAGACTATGCCATAGGCGGTGTGCTAGTACAATAAGGTAACCCAGTAGCATATGAGAGCCGAAAGCTCAATGAGACCGAAAGGCGTGGTCCAAGAGAAGGAGATGACAGCAATAGTGCACTACTTGAGAACGTGGAGGCGGGTCGCGATTTCTGGTCAAGACGGATAATGTGGCGACGAGTGACTTCCTGACCCAGAAGAAACTCACGCCAAAACGGGGACGATGGCAAGCAAGACAAACTTGCCAAGTTTGATTGATATGGTGCGTCAGTCTGCCGCTTTGACGGACCAACCAGGTCGCGGATGCCTTAAGCTTAAGTAGGAAGACAGAGCTGGCGGCATTTAAGTGTGAGGCAGTGGCAGCCACCAGCAGGGTCACGAGTACCATACCGCATCGTATTCGAGATGGGCTTGAAAAAGGACCCGCGAGAAGCCTTTTGCACCAAGCTAAGGAATGAAAAACTCGGCTTGGATCAAGGATGGGGCTCTTGGTCACAAAAGGGAATCCACTTTTTTTTTCTTTCAAAACCTTTCTTTTTTCGGTATGCCGCTCCGCGAGCAAGGAGTGCCACGCACGAGCGGAGCGAAAACAAAGCCAAAGCAGGGGGAATTCTTCGTTAAGGGAAATCCTTTGATTGTGTATTGAATATAGATGTCTTTCTTGTTCCACTAGCTAGGACCAAATTCTCACATGTCTCTTTCGTTATTACAACCTTCTTTTTTGATGTCAAAGACCAGAAGCTATGCGCAAATTCTCATTGGATCTCGGTTGTTCTTAACAGCGATGGCTATTCATTTAAGTCTTCGGGTAGCACCACTAGATCTTCAACAAGGTGGAAATTCTCGTATTCTGTATGTACATGTTCCTGCGGCTCGGATGAGTATTCTTGTTTATATCGCTACGGCTATAAACACTTTCTTGTTCCTATTAACAAAACATCCCCTTTTTCTTCGCTCTTCCGGAACCGGTACAGAAATGGGTGCTTTTTTTACGTTGTTTACTTTAGTGACTGGGGGGTTTCGGGGAAGACCTATGTGGGGCACCTTTTGGGTGTGGGATGCTCGTTTAACCTCTGTATTCATCTCGTTCCTTATTTACCTGGGTGCACTGCGTTTTCAAAAGCTTCCTGTCGAACCGGCTTCTATTTCAATCCGTGTTGGACCGATCGATATACCAATAATCAAGTTTTCAGTCAACTGGTGGAATACATCGCATCAACCTGGGAGCATTAGCAGATCTGGTACATCAATACATGTTCCTATGCCCATTCCAATCTTGTCTAACTTTGCTAACTTCCCCTTCTCAACCCGTATCTTGTTCGTTTTGGAAACACGTCTTCCTATTCCATCTTTTCCCGAATCTCCTTTAACGGAAGAAATAGAAGCTTGA

mRNA sequence

ATGCACAGAGGAACAGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTGAAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTCCGCATTACTCATTTTAAAGTTTCCCACGGTGATCTAATATCTTTTCAAGAAAATGACGCGAGAATCCGCGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGAAAAAATCATAGGCAAATTCCTGGATCACCCGTTGCGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAACAGAATGAAGAGGAATTTGTATCATTTGAAATCCCTATTCTTATCGAATAGAAGGAACGAGAAAAACCGAAATCTTCCTACTCGAACAAGAAGTCCTATAGTTGACAACTCTTCTTTATATAGTATTCGGGGAATCCTCCTTAATAGACGAAATATTCCTATTATGTCAATGCCAATTGAATCAATGTTATTAGCTGTGAATTCGAACTTTTTGGTATTTTCCGTTTCTTCGGATGATATGATGGGTCAATCATTTGCTTCATTGGTTCCAACGGTGGCAGCTGCGGAATCCGCTATTGGGTTAGCCATTTTCGTTATTACTTTCCGAGTCCGAGGGACTATTGCTGTAGAATTTATTAATAGCATTCAAGTCGAATCATTACCAATGGCGCGCTATGCGCCTAAGTGCGAAAAGACAGTGCAAGCTTTGTTATGCCGAAACCTAAATGTTAAGTCAGCAACACTTCCAAATGCCACTTCTTCCCGTCGCATCCGTCTTCAGGACGATCTAGTCACAGGTTTTCACTTCTCAGTGAGTGAAAGATTTGTCCCCGGGTCGATGGCTATTCATTTAAGTCTTCGGGTAGCACCACTAGATCTTCAACAAGGTGGAAATTCTCGTATTCTGTATGTACATGTTCCTGCGGCTCGGATGAGTATTCTTGTTTATATCGCTACGGCTATAAACACTTTCTTGTTCCTATTAACAAAACATCCCCTTTTTCTTCGCTCTTCCGGAACCGGTACAGAAATGGGTGCTTTTTTTACGTTGTTTACTTTAGTGACTGGGGGGTTTCGGGGAAGACCTATGTGGGGCACCTTTTGGGTGTGGGATGCTCGTTTAACCTCTGTATTCATCTCGTTCCTTATTTACCTGGGTGCACTGCGTTTTCAAAAGCTTCCTGTCGAACCGGCTTCTATTTCAATCCGTGTTGGACCGATCGATATACCAATAATCAAGTTTTCAGTCAACTGGTGGAATACATCGCATCAACCTGGGAGCATTAGCAGATCTGGTACATCAATACATGTTCCTATGCCCATTCCAATCTTGTCTAACTTTGCTAACTTCCCCTTCTCAACCCGTATCTTGTTCGTTTTGGAAACACGTCTTCCTATTCCATCTTTTCCCGAATCTCCTTTAACGGAAGAAATAGAAGCTTGA

Coding sequence (CDS)

ATGCACAGAGGAACAGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGTCTCCATTTTAGTGAAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTCCGCATTACTCATTTTAAAGTTTCCCACGGTGATCTAATATCTTTTCAAGAAAATGACGCGAGAATCCGCGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGAAAAAATCATAGGCAAATTCCTGGATCACCCGTTGCGTTCTTCTATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAACAGAATGAAGAGGAATTTGTATCATTTGAAATCCCTATTCTTATCGAATAGAAGGAACGAGAAAAACCGAAATCTTCCTACTCGAACAAGAAGTCCTATAGTTGACAACTCTTCTTTATATAGTATTCGGGGAATCCTCCTTAATAGACGAAATATTCCTATTATGTCAATGCCAATTGAATCAATGTTATTAGCTGTGAATTCGAACTTTTTGGTATTTTCCGTTTCTTCGGATGATATGATGGGTCAATCATTTGCTTCATTGGTTCCAACGGTGGCAGCTGCGGAATCCGCTATTGGGTTAGCCATTTTCGTTATTACTTTCCGAGTCCGAGGGACTATTGCTGTAGAATTTATTAATAGCATTCAAGTCGAATCATTACCAATGGCGCGCTATGCGCCTAAGTGCGAAAAGACAGTGCAAGCTTTGTTATGCCGAAACCTAAATGTTAAGTCAGCAACACTTCCAAATGCCACTTCTTCCCGTCGCATCCGTCTTCAGGACGATCTAGTCACAGGTTTTCACTTCTCAGTGAGTGAAAGATTTGTCCCCGGGTCGATGGCTATTCATTTAAGTCTTCGGGTAGCACCACTAGATCTTCAACAAGGTGGAAATTCTCGTATTCTGTATGTACATGTTCCTGCGGCTCGGATGAGTATTCTTGTTTATATCGCTACGGCTATAAACACTTTCTTGTTCCTATTAACAAAACATCCCCTTTTTCTTCGCTCTTCCGGAACCGGTACAGAAATGGGTGCTTTTTTTACGTTGTTTACTTTAGTGACTGGGGGGTTTCGGGGAAGACCTATGTGGGGCACCTTTTGGGTGTGGGATGCTCGTTTAACCTCTGTATTCATCTCGTTCCTTATTTACCTGGGTGCACTGCGTTTTCAAAAGCTTCCTGTCGAACCGGCTTCTATTTCAATCCGTGTTGGACCGATCGATATACCAATAATCAAGTTTTCAGTCAACTGGTGGAATACATCGCATCAACCTGGGAGCATTAGCAGATCTGGTACATCAATACATGTTCCTATGCCCATTCCAATCTTGTCTAACTTTGCTAACTTCCCCTTCTCAACCCGTATCTTGTTCGTTTTGGAAACACGTCTTCCTATTCCATCTTTTCCCGAATCTCCTTTAACGGAAGAAATAGAAGCTTGA

Protein sequence

MHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVRITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHLKSLFLSNRRNEKNRNLPTRTRSPIVDNSSLYSIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQVESLPMARYAPKCEKTVQALLCRNLNVKSATLPNATSSRRIRLQDDLVTGFHFSVSERFVPGSMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTKHPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRFQKLPVEPASISIRVGPIDIPIIKFSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANFPFSTRILFVLETRLPIPSFPESPLTEEIEA

Homology

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BLAST of HG10008820.1 vs. NCBI nr
Match: GEX42648.1 (cytochrome c biogenesis C, mitochondrial [Tanacetum cinerariifolium])

HSP 1 Score: 567.4 bits (1461), Expect = 1.3e-157
Identity = 323/442 (73.08%), Postives = 326/442 (73.76%), Query Frame = 0


Query: 174  IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGL 233
            IRGIL NR+NIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGL
Sbjct: 690  IRGILFNRQNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGL 749

Query: 234  AIFVITFRVRGTIAVEFINSIQ-------------------------------------- 293
            AIFVITFRVRGTIAVE INSIQ                                      
Sbjct: 750  AIFVITFRVRGTIAVESINSIQGFIIFSRKSLGKTFQETLDGRIQAIQEESQQFLNPNEV 809

Query: 294  ----------------------VESLPMARYAPKCEKTVQALLCRNLNVKSATLPNATSS 353
                                  VESLPMAR APKCEKTVQALLCRNLNVKSATLPNATSS
Sbjct: 810  VPPESNEQQRLLRISLRICGTVVESLPMARSAPKCEKTVQALLCRNLNVKSATLPNATSS 869

Query: 354  RRIRLQDDLVTGFHFSVSERFVPGS----------------------------------- 413
            RRIRLQDDLVTGFHFSVSERFVPGS                                   
Sbjct: 870  RRIRLQDDLVTGFHFSVSERFVPGSTLKASIVELIREGLVVLRMTRSYAKIFIGSRLFLT 929

Query: 414  -MAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTKHPLFLRSS 473
             MAIHLSLRVAPLDLQQGGNSRI YVHVPAARMSILVYIATAINTFLFLLTKHPLFLRS 
Sbjct: 930  AMAIHLSLRVAPLDLQQGGNSRIPYVHVPAARMSILVYIATAINTFLFLLTKHPLFLRSF 989

Query: 474  GTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRFQKLPVEPA 520
            GTG EMGAF TLFTLVTGGFRGRPMWGTFWVWDARLTSV ISFLIY+GAL FQKLP+EPA
Sbjct: 990  GTGIEMGAFSTLFTLVTGGFRGRPMWGTFWVWDARLTSVLISFLIYMGALCFQKLPIEPA 1049

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BLAST of HG10008820.1 vs. NCBI nr
Match: KAF7117260.1 (hypothetical protein RHSIM_RhsimMtG0003100 [Rhododendron simsii])

HSP 1 Score: 477.6 bits (1228), Expect = 1.3e-130
Identity = 319/639 (49.92%), Postives = 327/639 (51.17%), Query Frame = 0


Query: 174 IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGL 233
           IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIG 
Sbjct: 105 IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGS 164

Query: 234 AIFVITFRVRGTIA---------------------------------------------- 293
           AIFVITFRVRGTIA                                              
Sbjct: 165 AIFVITFRVRGTIAGQGLSRWASASDSKARKMLFAAILSICASSSKKISIYNEEMIVARC 224

Query: 294 -------------------------------VEFINSIQ--------------------- 353
                                           +F+N  +                     
Sbjct: 225 FIGFIIFSRKSLGNTFKVTLDGRIQAIQEESQQFLNPNEVVPPESNEQQRLLRISLRICG 284

Query: 354 --VESLPMARYAPKCEKTVQALLCRNLNVKSATLPNATSSRRIRLQDDLVT--------- 413
             VESLPMAR APKCEKTVQALLCRNLNVKSATLPNA SSRRIRLQDDLVT         
Sbjct: 285 TVVESLPMARCAPKCEKTVQALLCRNLNVKSATLPNAISSRRIRLQDDLVTEERIQYQDD 344

Query: 414 ---------------------------------------------------------GF- 473
                                                                    G+ 
Sbjct: 345 FLSQEVQQVLEEFWDIMPHEAFDDLVMTFGLTNAPATFCTLYNELFHPYDGWYTLIVGYS 404

Query: 474 ------------------------------------------------------------ 520
                                                                       
Sbjct: 405 HSLNDHVSHLRTFFKALRKNHLYVKKEKCSFRQTEILFLGHWMGIRAIEEWQAPTKAVMD 464

[Close]

BLAST of HG10008820.1 vs. NCBI nr
Match: KAF7117263.1 (hypothetical protein RHSIM_RhsimMtG0007900 [Rhododendron simsii])

HSP 1 Score: 477.6 bits (1228), Expect = 1.3e-130
Identity = 319/639 (49.92%), Postives = 327/639 (51.17%), Query Frame = 0


Query: 174 IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGL 233
           IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIG 
Sbjct: 156 IRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGS 215

Query: 234 AIFVITFRVRGTIA---------------------------------------------- 293
           AIFVITFRVRGTIA                                              
Sbjct: 216 AIFVITFRVRGTIAGQGLSRWASASDSKARKMLFAAILSICASSSKKISIYNEEMIVARC 275

Query: 294 -------------------------------VEFINSIQ--------------------- 353
                                           +F+N  +                     
Sbjct: 276 FIGFIIFSRKSLGNTFKVTLDGRIQAIQEESQQFLNPNEVVPPESNEQQRLLRISLRICG 335

Query: 354 --VESLPMARYAPKCEKTVQALLCRNLNVKSATLPNATSSRRIRLQDDLVT--------- 413
             VESLPMAR APKCEKTVQALLCRNLNVKSATLPNA SSRRIRLQDDLVT         
Sbjct: 336 TVVESLPMARCAPKCEKTVQALLCRNLNVKSATLPNAISSRRIRLQDDLVTEERIQYQDD 395

Query: 414 ---------------------------------------------------------GF- 473
                                                                    G+ 
Sbjct: 396 FLSQEVQQVLEEFWDIMPHEAFDDLVMTFGLTNAPATFCTLYNELFHPYDGWYTLIVGYS 455

Query: 474 ------------------------------------------------------------ 520
                                                                       
Sbjct: 456 HSLNDHVSHLRTFFKALRKNHLYVKKEKCSFRQTEILFLGHWMGIRAIEEWQAPTKAVMD 515

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BLAST of HG10008820.1 vs. NCBI nr
Match: THG22239.1 (hypothetical protein TEA_006991 [Camellia sinensis var. sinensis])

HSP 1 Score: 458.0 bits (1177), Expect = 1.1e-124
Identity = 246/296 (83.11%), Postives = 251/296 (84.80%), Query Frame = 0


Query: 224 VAAAESAIGLAIFVITFRVRGTIAVEFINSIQVESLPMARYAPKCEKTVQALLCRNLNVK 283
           V   ES     +  I+ R+ GT+         VESLPMAR APKCEK VQALLCRNLNVK
Sbjct: 74  VVPTESNEQQRLLRISLRICGTV---------VESLPMARCAPKCEKIVQALLCRNLNVK 133

Query: 284 SATLPNATSSRRIRLQDDLVTGFHFSVSERFVPGSMAIHLSLRVAPLDLQQGGNSRILYV 343
           SATLPNATSSRRIRLQDDLVT             +MAIH SLRVAPLDLQQGGNS I YV
Sbjct: 134 SATLPNATSSRRIRLQDDLVT-------------AMAIHFSLRVAPLDLQQGGNSCIPYV 193

Query: 344 HVPAARMSILVYIATAINTFLFLLTKHPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMW 403
           HVPAARMSILVYIATAINTFLFLLTKHPLFLRSSGTGTEMGAF TLFTLVTGGFRGRPMW
Sbjct: 194 HVPAARMSILVYIATAINTFLFLLTKHPLFLRSSGTGTEMGAFSTLFTLVTGGFRGRPMW 253

Query: 404 GTFWVWDARLTSVFISFLIYLGALRFQKLPVEPASISIRVGPIDIPIIKFSVNWWNTSHQ 463
           GTFWVWDARLTSVFISFLIYLGALRFQKLPVEPA ISIR GPIDIPIIK SVNWWNTSHQ
Sbjct: 254 GTFWVWDARLTSVFISFLIYLGALRFQKLPVEPAPISIRAGPIDIPIIKSSVNWWNTSHQ 313

Query: 464 PGSISRSGTSIHVPMPIPILSNFANFPFSTRILFVLETRLPIPSFPESPLTEEIEA 520
           PGSISRSGTSIHVPMPIPILSNFAN PFSTRILFVLETRLPIPSF ESPLTEEIEA
Sbjct: 314 PGSISRSGTSIHVPMPIPILSNFANSPFSTRILFVLETRLPIPSFLESPLTEEIEA 347

[Close]

BLAST of HG10008820.1 vs. NCBI nr
Match: YP_009913608.1 (cytochrome c biogenesis C [Luffa acutangula] >QLJ93005.1 cytochrome c biogenesis C [Luffa acutangula])

HSP 1 Score: 401.7 bits (1031), Expect = 9.3e-108
Identity = 201/210 (95.71%), Postives = 203/210 (96.67%), Query Frame = 0


Query: 310 VSERFVPGSMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTK 369
           +  R    +MAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTK
Sbjct: 23  IGSRLFLTAMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTK 82

Query: 370 HPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRF 429
           HPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGAL F
Sbjct: 83  HPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALCF 142

Query: 430 QKLPVEPASISIRVGPIDIPIIKFSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANF 489
           QKLPVEPASISIRVGPIDIPIIKFSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANF
Sbjct: 143 QKLPVEPASISIRVGPIDIPIIKFSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANF 202

Query: 490 PFSTRILFVLETRLPIPSFPESPLTEEIEA 520
           PFSTRILFVLETRLPIPSFPESPLTEEIEA
Sbjct: 203 PFSTRILFVLETRLPIPSFPESPLTEEIEA 232

[Close]

BLAST of HG10008820.1 vs. ExPASy Swiss-Prot
Match: P92527 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Arabidopsis thaliana OX=3702 GN=CCMC PE=2 SV=4)

HSP 1 Score: 326.2 bits (835), Expect = 6.5e-88
Identity = 172/202 (85.15%), Postives = 177/202 (87.62%), Query Frame = 0


Query: 318 SMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTKHPLFLRSS 377
           +MAI+LSL VAPLD QQGGNSRILYVHVP A MSI+VYIATAINTFLFLLTKHPL+L SS
Sbjct: 31  AMAIYLSLGVAPLDFQQGGNSRILYVHVPVAWMSIIVYIATAINTFLFLLTKHPLYLCSS 90

Query: 378 GTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRFQKLPVEPA 437
           GTG EMGAFFTLFTLVTGGF GRPMWGTFWVWDARLTSVFI F IYLGAL FQKLPVE A
Sbjct: 91  GTGIEMGAFFTLFTLVTGGFWGRPMWGTFWVWDARLTSVFILFFIYLGALCFQKLPVELA 150

Query: 438 SISIRVGPIDIPIIKFSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANFPFSTRILF 497
           SI I VG IDIPIIKFSVNWWNT HQPGSISR GTSIHV M IPILSNFANF F T ILF
Sbjct: 151 SILICVGLIDIPIIKFSVNWWNTLHQPGSISRFGTSIHVSMLIPILSNFANFLFLTCILF 210

Query: 498 VLETRLPIPSFPESPLTEEIEA 520
           VLETRL I SF ES +TEEIEA
Sbjct: 211 VLETRLLILSFLESSITEEIEA 232

[Close]

BLAST of HG10008820.1 vs. ExPASy Swiss-Prot
Match: Q31708 (Ribosomal protein S4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS4 PE=1 SV=2)

HSP 1 Score: 255.8 bits (652), Expect = 1.1e-66
Identity = 144/203 (70.94%), Postives = 151/203 (74.38%), Query Frame = 0


Query: 1   MHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVRITHFKV 60
           MHRGT+RTSYIPF LN ETR DVIP+RL+F ETIPQARQ ISHRRVCVNKGMV ITHFK+
Sbjct: 87  MHRGTKRTSYIPFLLNLETRFDVIPLRLYFLETIPQARQLISHRRVCVNKGMVSITHFKL 146

Query: 61  SHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHP------------------- 120
           SHGD+ISFQEN+A IRGEEIRRSFY EI VEKIIGK L  P                   
Sbjct: 147 SHGDIISFQENNAIIRGEEIRRSFYKEILVEKIIGKLLHQPLRMWRRSKTEWFHLLKTKR 206

Query: 121 -------------LRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHLKSLFLSN 172
                        LRSSMQEEDLERTKKFGSEKVCLGSSFAEH RMKRNL  LKSLFLS 
Sbjct: 207 GCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNL--LKSLFLSK 266

[Close]

BLAST of HG10008820.1 vs. ExPASy Swiss-Prot
Match: P38453 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Marchantia polymorpha OX=3197 GN=CCMC PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.1e-66
Identity = 131/191 (68.59%), Postives = 150/191 (78.53%), Query Frame = 0


Query: 318 SMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTKHPLFLRSS 377
           +MAI+LS+ VAP D QQG N RI+YVHVPAA MS+L+YIA AI++ LFLLTKHPLF   S
Sbjct: 31  AMAIYLSIWVAPSDFQQGENYRIIYVHVPAAWMSLLIYIAMAISSVLFLLTKHPLFQLFS 90

Query: 378 GTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRFQKLPVEPA 437
            T  ++GA FTLFTLVTGGF G+PMWGTFWVWDARLTSV I F IYLGALRFQ+   + A
Sbjct: 91  KTAAKIGALFTLFTLVTGGFWGKPMWGTFWVWDARLTSVLILFFIYLGALRFQEFSADVA 150

Query: 438 SISIRVGPIDIPIIKFSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANFPFSTRILF 497
           SI I +G I+IPIIKFSVNWWNT HQP SIS+ GTSIH+ M IPI   FA+F F T I F
Sbjct: 151 SIFICIGLINIPIIKFSVNWWNTLHQPSSISQFGTSIHISMLIPIFLIFASFFFLTGIFF 210

Query: 498 VLETRLPIPSF 509
           +LETR  I SF
Sbjct: 211 ILETRQIILSF 221

[Close]

BLAST of HG10008820.1 vs. ExPASy Swiss-Prot
Match: P30962 (Heme exporter protein C OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=cycZ PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.5e-31
Identity = 73/164 (44.51%), Postives = 103/164 (62.80%), Query Frame = 0


Query: 327 VAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTKHPLFLRSSGTGTEMGAF 386
           +AP D QQG   +I+++HVP A +S+ V+   +I +   L+ +HPL   ++     +GA 
Sbjct: 40  LAPDDYQQGATVKIMFIHVPNAWLSMFVWGVMSIASLGTLVWRHPLADVAAKAAAPIGAA 99

Query: 387 FTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRFQKLPVEP------ASIS 446
           FT   L+TG   GRPMWGT+W WDARLTSV I FL+YLG +   +   +P      A++ 
Sbjct: 100 FTFLALLTGSLWGRPMWGTYWEWDARLTSVLILFLMYLGLMALWRAVDDPSRAARAAAVL 159

Query: 447 IRVGPIDIPIIKFSVNWWNTSHQPGSISR-SGTSIHVPMPIPIL 484
             VG I++PIIKFSV+WWNT HQP S+ R  G+S+     IP+L
Sbjct: 160 TLVGAINLPIIKFSVDWWNTLHQPASVMRMGGSSLDKSFLIPLL 203

[Close]

BLAST of HG10008820.1 vs. ExPASy Swiss-Prot
Match: Q04614 (NADH-ubiquinone oxidoreductase chain 4L OS=Arabidopsis thaliana OX=3702 GN=ND4L PE=1 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 1.1e-26
Identity = 73/85 (85.88%), Postives = 74/85 (87.06%), Query Frame = 0


Query: 171 LYSIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESA 230
           +  I GILLNRRNI IM M IE MLLAVNSNFLVFSVS DDMMGQ FA LV TVAAAESA
Sbjct: 15  ILGIWGILLNRRNILIMLMSIELMLLAVNSNFLVFSVSLDDMMGQVFALLVLTVAAAESA 74

Query: 231 IGLAIFVITFRVRGTIAVEFINSIQ 256
           IGLAIFVITFRVRGTIAVEFINSIQ
Sbjct: 75  IGLAIFVITFRVRGTIAVEFINSIQ 99

[Close]

BLAST of HG10008820.1 vs. ExPASy TrEMBL
Match: A0A4S4EYT9 (ATP synthase protein MI25 OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_006991 PE=3 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 5.3e-125
Identity = 246/296 (83.11%), Postives = 251/296 (84.80%), Query Frame = 0


Query: 224 VAAAESAIGLAIFVITFRVRGTIAVEFINSIQVESLPMARYAPKCEKTVQALLCRNLNVK 283
           V   ES     +  I+ R+ GT+         VESLPMAR APKCEK VQALLCRNLNVK
Sbjct: 74  VVPTESNEQQRLLRISLRICGTV---------VESLPMARCAPKCEKIVQALLCRNLNVK 133

Query: 284 SATLPNATSSRRIRLQDDLVTGFHFSVSERFVPGSMAIHLSLRVAPLDLQQGGNSRILYV 343
           SATLPNATSSRRIRLQDDLVT             +MAIH SLRVAPLDLQQGGNS I YV
Sbjct: 134 SATLPNATSSRRIRLQDDLVT-------------AMAIHFSLRVAPLDLQQGGNSCIPYV 193

Query: 344 HVPAARMSILVYIATAINTFLFLLTKHPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMW 403
           HVPAARMSILVYIATAINTFLFLLTKHPLFLRSSGTGTEMGAF TLFTLVTGGFRGRPMW
Sbjct: 194 HVPAARMSILVYIATAINTFLFLLTKHPLFLRSSGTGTEMGAFSTLFTLVTGGFRGRPMW 253

Query: 404 GTFWVWDARLTSVFISFLIYLGALRFQKLPVEPASISIRVGPIDIPIIKFSVNWWNTSHQ 463
           GTFWVWDARLTSVFISFLIYLGALRFQKLPVEPA ISIR GPIDIPIIK SVNWWNTSHQ
Sbjct: 254 GTFWVWDARLTSVFISFLIYLGALRFQKLPVEPAPISIRAGPIDIPIIKSSVNWWNTSHQ 313

Query: 464 PGSISRSGTSIHVPMPIPILSNFANFPFSTRILFVLETRLPIPSFPESPLTEEIEA 520
           PGSISRSGTSIHVPMPIPILSNFAN PFSTRILFVLETRLPIPSF ESPLTEEIEA
Sbjct: 314 PGSISRSGTSIHVPMPIPILSNFANSPFSTRILFVLETRLPIPSFLESPLTEEIEA 347

[Close]

BLAST of HG10008820.1 vs. ExPASy TrEMBL
Match: A0A7D6BYD9 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Luffa acutangula OX=56866 GN=ccmC PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 4.5e-108
Identity = 201/210 (95.71%), Postives = 203/210 (96.67%), Query Frame = 0


Query: 310 VSERFVPGSMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTK 369
           +  R    +MAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTK
Sbjct: 23  IGSRLFLTAMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTK 82

Query: 370 HPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRF 429
           HPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGAL F
Sbjct: 83  HPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALCF 142

Query: 430 QKLPVEPASISIRVGPIDIPIIKFSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANF 489
           QKLPVEPASISIRVGPIDIPIIKFSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANF
Sbjct: 143 QKLPVEPASISIRVGPIDIPIIKFSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANF 202

Query: 490 PFSTRILFVLETRLPIPSFPESPLTEEIEA 520
           PFSTRILFVLETRLPIPSFPESPLTEEIEA
Sbjct: 203 PFSTRILFVLETRLPIPSFPESPLTEEIEA 232

[Close]

BLAST of HG10008820.1 vs. ExPASy TrEMBL
Match: A0A5J6NGL6 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Cercis canadensis OX=49801 GN=ccmC PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 1.4e-106
Identity = 198/210 (94.29%), Postives = 201/210 (95.71%), Query Frame = 0


Query: 310 VSERFVPGSMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTK 369
           +  R    +MAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTK
Sbjct: 23  IGSRLFLTAMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTK 82

Query: 370 HPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRF 429
           HPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRF
Sbjct: 83  HPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRF 142

Query: 430 QKLPVEPASISIRVGPIDIPIIKFSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANF 489
           QKLPVEPASISIR GPIDIPIIK SVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANF
Sbjct: 143 QKLPVEPASISIRAGPIDIPIIKSSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANF 202

Query: 490 PFSTRILFVLETRLPIPSFPESPLTEEIEA 520
           PFSTRILFVLETRLPIPSFPESPL +EIEA
Sbjct: 203 PFSTRILFVLETRLPIPSFPESPLRDEIEA 232

[Close]

BLAST of HG10008820.1 vs. ExPASy TrEMBL
Match: A0A2Z4HGQ1 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Senna occidentalis OX=126820 GN=ccmC PE=3 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 5.5e-106
Identity = 197/210 (93.81%), Postives = 200/210 (95.24%), Query Frame = 0


Query: 310 VSERFVPGSMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTK 369
           +  R    +MAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTK
Sbjct: 23  IGSRLFLTAMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTK 82

Query: 370 HPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRF 429
           HPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRF
Sbjct: 83  HPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRF 142

Query: 430 QKLPVEPASISIRVGPIDIPIIKFSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANF 489
           QKLPVEPA ISIR GPIDIPIIK SVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANF
Sbjct: 143 QKLPVEPAPISIRAGPIDIPIIKSSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANF 202

Query: 490 PFSTRILFVLETRLPIPSFPESPLTEEIEA 520
           PFSTRILFVLETRLPIPSFPESPL +EIEA
Sbjct: 203 PFSTRILFVLETRLPIPSFPESPLRDEIEA 232

[Close]

BLAST of HG10008820.1 vs. ExPASy TrEMBL
Match: A0A6B9QI56 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Castanospermum australe OX=24962 GN=ccmC PE=3 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 5.5e-106
Identity = 197/210 (93.81%), Postives = 200/210 (95.24%), Query Frame = 0


Query: 310 VSERFVPGSMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTK 369
           +  R    +MAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTK
Sbjct: 23  IGSRLFLTAMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTK 82

Query: 370 HPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRF 429
           HPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRF
Sbjct: 83  HPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRF 142

Query: 430 QKLPVEPASISIRVGPIDIPIIKFSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANF 489
           QKLPVEPA ISIR GPIDIPIIK SVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANF
Sbjct: 143 QKLPVEPAPISIRAGPIDIPIIKSSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANF 202

Query: 490 PFSTRILFVLETRLPIPSFPESPLTEEIEA 520
           PFSTRILFVLETRLPIPSFPESPL +EIEA
Sbjct: 203 PFSTRILFVLETRLPIPSFPESPLRDEIEA 232

[Close]

BLAST of HG10008820.1 vs. TAIR 10
Match: AT2G07771.2 (Cytochrome C assembly protein )

HSP 1 Score: 387.9 bits (995), Expect = 1.3e-107
Identity = 193/202 (95.54%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 318 SMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTKHPLFLRSS 377
           +MAIHLSL VAPLDLQQGGNSRILYVHVPAARMSI+VYIATAINTFLFLLTKHPL+LRSS
Sbjct: 31  AMAIHLSLGVAPLDLQQGGNSRILYVHVPAARMSIIVYIATAINTFLFLLTKHPLYLRSS 90

Query: 378 GTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRFQKLPVEPA 437
           GTG EMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRFQKLPVEPA
Sbjct: 91  GTGIEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRFQKLPVEPA 150

Query: 438 SISIRVGPIDIPIIKFSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANFPFSTRILF 497
           SISIR GPIDIPIIK SVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANFPFSTRILF
Sbjct: 151 SISIRAGPIDIPIIKSSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANFPFSTRILF 210

Query: 498 VLETRLPIPSFPESPLTEEIEA 520
           VLETRLPIPSF ESP+TEEIEA
Sbjct: 211 VLETRLPIPSFLESPITEEIEA 232

[Close]

BLAST of HG10008820.1 vs. TAIR 10
Match: ATMG00900.1 (cytochrome C biogenesis 256 )

HSP 1 Score: 387.9 bits (995), Expect = 1.3e-107
Identity = 193/202 (95.54%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 318 SMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTKHPLFLRSS 377
           +MAIHLSL VAPLDLQQGGNSRILYVHVPAARMSI+VYIATAINTFLFLLTKHPL+LRSS
Sbjct: 31  AMAIHLSLGVAPLDLQQGGNSRILYVHVPAARMSIIVYIATAINTFLFLLTKHPLYLRSS 90

Query: 378 GTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRFQKLPVEPA 437
           GTG EMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRFQKLPVEPA
Sbjct: 91  GTGIEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRFQKLPVEPA 150

Query: 438 SISIRVGPIDIPIIKFSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANFPFSTRILF 497
           SISIR GPIDIPIIK SVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANFPFSTRILF
Sbjct: 151 SISIRAGPIDIPIIKSSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANFPFSTRILF 210

Query: 498 VLETRLPIPSFPESPLTEEIEA 520
           VLETRLPIPSF ESP+TEEIEA
Sbjct: 211 VLETRLPIPSFLESPITEEIEA 232

[Close]

BLAST of HG10008820.1 vs. TAIR 10
Match: AT2G07681.1 (Cytochrome C assembly protein )

HSP 1 Score: 355.5 bits (911), Expect = 7.1e-98
Identity = 181/201 (90.05%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 318 SMAIHLSLRVAPLDLQQGGNSRILYVHVPAARMSILVYIATAINTFLFLLTKHPLFLRSS 377
           +MAIHLSL VAPLDLQQGGNSRILYVHVPAARMSI+VYIATAINTFLFLLTKHPL+LRSS
Sbjct: 411 AMAIHLSLGVAPLDLQQGGNSRILYVHVPAARMSIIVYIATAINTFLFLLTKHPLYLRSS 470

Query: 378 GTGTEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRFQKLPVEPA 437
           GTG EMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRFQKLPVEPA
Sbjct: 471 GTGIEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFLIYLGALRFQKLPVEPA 530

Query: 438 SISIRVGPIDIPIIKFSVNWWNTSHQPGSISRSGTSIHVPMPIPILSNFANFPFSTRILF 497
           SISIR GPIDIPIIK SVNWWNTSHQPGSISRS TSIHVPMPIPILSNFANFPFSTRILF
Sbjct: 531 SISIRAGPIDIPIIKSSVNWWNTSHQPGSISRSSTSIHVPMPIPILSNFANFPFSTRILF 590

Query: 498 VLETRLPIPSFPESPLTEEIE 519
           VLET        +S LTE  E
Sbjct: 591 VLETL-------QSQLTESKE 604

[Close]

BLAST of HG10008820.1 vs. TAIR 10
Match: AT2G07734.1 (Alpha-L RNA-binding motif/Ribosomal protein S4 family protein )

HSP 1 Score: 271.9 bits (694), Expect = 1.0e-72
Identity = 149/203 (73.40%), Postives = 155/203 (76.35%), Query Frame = 0


Query: 1   MHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVRITHFKV 60
           MHRGT+RTSYIPFPLNPETR DVIP+RLHF ETIPQARQPISHRRVCVNKGMV ITHFK+
Sbjct: 87  MHRGTKRTSYIPFPLNPETRFDVIPLRLHFLETIPQARQPISHRRVCVNKGMVSITHFKL 146

Query: 61  SHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHP------------------- 120
           SHGD+ISFQEN+A IRGEEIRRSFY EISVEKIIGK L  P                   
Sbjct: 147 SHGDIISFQENNAIIRGEEIRRSFYKEISVEKIIGKLLHQPLRMWRRSKTEWFHLLKTKR 206

Query: 121 -------------LRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHLKSLFLSN 172
                        LRSSMQEEDLERTKKFGSEKVCLGSSFAEH RMKRNL  LKSLFLS 
Sbjct: 207 GCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNL--LKSLFLSK 266

[Close]

BLAST of HG10008820.1 vs. TAIR 10
Match: ATMG00290.1 (mitochondrial ribosomal protein S4 )

HSP 1 Score: 271.9 bits (694), Expect = 1.0e-72
Identity = 149/203 (73.40%), Postives = 155/203 (76.35%), Query Frame = 0


Query: 1   MHRGTERTSYIPFPLNPETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVRITHFKV 60
           MHRGT+RTSYIPFPLNPETR DVIP+RLHF ETIPQARQPISHRRVCVNKGMV ITHFK+
Sbjct: 87  MHRGTKRTSYIPFPLNPETRFDVIPLRLHFLETIPQARQPISHRRVCVNKGMVSITHFKL 146

Query: 61  SHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHP------------------- 120
           SHGD+ISFQEN+A IRGEEIRRSFY EISVEKIIGK L  P                   
Sbjct: 147 SHGDIISFQENNAIIRGEEIRRSFYKEISVEKIIGKLLHQPLRMWRRSKTEWFHLLKTKR 206

Query: 121 -------------LRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHLKSLFLSN 172
                        LRSSMQEEDLERTKKFGSEKVCLGSSFAEH RMKRNL  LKSLFLS 
Sbjct: 207 GCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNL--LKSLFLSK 266

The following BLAST results are available for this feature:

BLAST of HG10008820.1 vs. NCBI nr


Match Name	E-value	Identity	Description
GEX42648.1	1.3e-157	73.08	cytochrome c biogenesis C, mitochondrial [Tanacetum cinerariifolium]	[more]
KAF7117260.1	1.3e-130	49.92	hypothetical protein RHSIM_RhsimMtG0003100 [Rhododendron simsii]	[more]
KAF7117263.1	1.3e-130	49.92	hypothetical protein RHSIM_RhsimMtG0007900 [Rhododendron simsii]	[more]
THG22239.1	1.1e-124	83.11	hypothetical protein TEA_006991 [Camellia sinensis var. sinensis]	[more]
YP_009913608.1	9.3e-108	95.71	cytochrome c biogenesis C [Luffa acutangula] >QLJ93005.1 cytochrome c biogenesis...	[more]

BLAST of HG10008820.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92527	6.5e-88	85.15	Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Arabidopsi...	[more]
Q31708	1.1e-66	70.94	Ribosomal protein S4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS4 PE=1...	[more]
P38453	4.1e-66	68.59	Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Marchantia...	[more]
P30962	1.5e-31	44.51	Heme exporter protein C OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCR...	[more]
Q04614	1.1e-26	85.88	NADH-ubiquinone oxidoreductase chain 4L OS=Arabidopsis thaliana OX=3702 GN=ND4L ...	[more]

BLAST of HG10008820.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4S4EYT9	5.3e-125	83.11	ATP synthase protein MI25 OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_00...	[more]
A0A7D6BYD9	4.5e-108	95.71	Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Luffa acut...	[more]
A0A5J6NGL6	1.4e-106	94.29	Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Cercis can...	[more]
A0A2Z4HGQ1	5.5e-106	93.81	Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Senna occi...	[more]
A0A6B9QI56	5.5e-106	93.81	Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Castanospe...	[more]

BLAST of HG10008820.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07771.2	1.3e-107	95.54	Cytochrome C assembly protein	[more]
ATMG00900.1	1.3e-107	95.54	cytochrome C biogenesis 256	[more]
AT2G07681.1	7.1e-98	90.05	Cytochrome C assembly protein	[more]
AT2G07734.1	1.0e-72	73.40	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein	[more]
ATMG00290.1	1.0e-72	73.40	mitochondrial ribosomal protein S4	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003557	Cytochrome c-type biogenesis protein CcmC	PRINTS	PR01386	CCMCBIOGNSIS	coord: 346..366 score: 50.16 coord: 434..460 score: 56.54 coord: 481..505 score: 46.4 coord: 384..404 score: 70.48 coord: 329..346 score: 66.3 coord: 405..425 score: 74.29
IPR003557	Cytochrome c-type biogenesis protein CcmC	TIGRFAM	TIGR01191	TIGR01191	coord: 329..505 e-value: 1.9E-71 score: 237.8
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 19..80 e-value: 8.5E-6 score: 35.3
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 22..66 e-value: 4.1E-8 score: 32.8
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 20..71 e-value: 1.58496E-10 score: 54.9482
IPR008688	ATP synthase, F0 complex, subunit B/MI25	PFAM	PF05405	Mt_ATP-synt_B	coord: 253..315 e-value: 1.5E-15 score: 57.2
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 18..106 e-value: 7.6E-13 score: 50.7
IPR002541	Cytochrome c assembly protein	PFAM	PF01578	Cytochrom_C_asm	coord: 326..459 e-value: 1.0E-22 score: 81.0
None	No IPR available	GENE3D	1.10.287.3510		coord: 169..255 e-value: 2.2E-19 score: 70.9
None	No IPR available	PANTHER	PTHR11831:SF30	RIBOSOMAL PROTEIN S4-RELATED	coord: 104..171
None	No IPR available	PANTHER	PTHR11831:SF30	RIBOSOMAL PROTEIN S4-RELATED	coord: 1..103
None	No IPR available	PROSITE	PS50889	S4	coord: 22..90 score: 9.4095
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 13..104
IPR039428	NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like	PFAM	PF00420	Oxidored_q2	coord: 174..250 e-value: 1.0E-9 score: 37.9
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 1..103
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 104..171

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10008820	HG10008820	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10008820.1-cds	HG10008820.1-cds-Chr06:65421..65723	CDS
HG10008820.1-cds	HG10008820.1-cds-Chr06:65820..66033	CDS
HG10008820.1-cds	HG10008820.1-cds-Chr06:66943..67191	CDS
HG10008820.1-cds	HG10008820.1-cds-Chr06:67722..67907	CDS
HG10008820.1-cds	HG10008820.1-cds-Chr06:69749..70356	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10008820.1	HG10008820.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0017004	cytochrome complex assembly
biological_process	GO:0015886	heme transport
cellular_component	GO:0016020	membrane
cellular_component	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0020037	heme binding
molecular_function	GO:0015232	heme transmembrane transporter activity
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0003723	RNA binding