HG10007781.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10007781.1
TypemRNA
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr10: 13014461 .. 13015441 (-)
Sequence length531
RNA-Seq ExpressionHG10007781.1
SyntenyHG10007781.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCGCAACCATGCGTCAAAGATTACATCAATGCATGGCTAATAAAGACAAAGCCTATGATTCTAGAAAATCCAACCATGATAGTTGTGCCAGAATATTTTCAGTACCATGAGCCGTTAGACAGAGACGACTGCGCGATCAGAAAGGACGGAGTCGAACGCGTTGTGGGCCCACCCTGCGCCAATATGAAAAGTACTACGATGAGGGCTATAAAATTCGCCCAAGAAGAGAAAAGAAAGCACCAAAAAATCATAAAGAAAAAAATAGGGTTAGCAGCAAACAATTTTGGGAGAGCGCCGCCACACTTCATCTTCTTCCTCCTCATAGCGATAGTTGAGAGGATCAGTTTTCACAGCCACCACAAGGAACGCGGTGAACCGAAGCTCGACAAGGAAGAGGATCTCACCGCTGCTTCCATTGCCATCTGCAATATCAGCGATACACCTTCACTGTCGGCGAGCAGGACACTCTTGCCGACAGCTTCTTCTTTCAATCTCTTTATTATTAAATGCACTGTCAGTGTATTATCATTGGATCAAGAACATCAAGTCTTTATCATTTTAATATATCGGAACTTCACATCTATCAGTTGTTCTTCACGTTTACAAGTATTTCACAACTCATTATGAGTAGCTAAACCTCCACGAGGGTTGGAGGCTGCTTTCATCAATCTTGTTGAATCAAGTTTAATAACTAGGTCATTTACAGCAATGTATTGTTAATCACGTGTCCTTATTTTAACGTGAGAACGTTGTTTTAGTTCTAGCGGTCGGCTACTCGAGAGAGCAAGTAACCATAGGCTACATTGTTGTAACTAAGAAGTTAATCTTAGAAATAGGATTCATCTTAGGCTCATTTAAACTAACACGCATCATAGACATATACTAGTGTGGCTTTTCTGCCGAAAGGTATGACCCAGTTGTGTTTGAAAGCATGATCGATGTAATTAAACCGATATTTGACAGGTTGATGAATGA

mRNA sequence

ATGTCATCGCAACCATGCGTCAAAGATTACATCAATGCATGGCTAATAAAGACAAAGCCTATGATTCTAGAAAATCCAACCATGATAGTTGTGCCAGAATATTTTCAGTACCATGAGCCGTTAGACAGAGACGACTGCGCGATCAGAAAGGACGGAGTCGAACGCGTTGTGGGCCCACCCTGCGCCAATATGAAAAGTACTACGATGAGGGCTATAAAATTCGCCCAAGAAGAGAAAAGAAAGCACCAAAAAATCATAAAGAAAAAAATAGGGTTAGCAGCAAACAATTTTGGGAGAGCGCCGCCACACTTCATCTTCTTCCTCCTCATAGCGATAGTTGAGAGGATCAGTTTTCACAGCCACCACAAGGAACGCGGTGAACCGAAGCTCGACAAGGAAGAGGATCTCACCGCTGCTTCCATTGCCATCTGCAATATCAGCGATACACCTTCACTGTCGGCGAGCAGGACACTCTTGCCGACAGCTTCTTCTTTCAATCTCTTTATTATTAAATGCACTGTTGATGAATGA

Coding sequence (CDS)

ATGTCATCGCAACCATGCGTCAAAGATTACATCAATGCATGGCTAATAAAGACAAAGCCTATGATTCTAGAAAATCCAACCATGATAGTTGTGCCAGAATATTTTCAGTACCATGAGCCGTTAGACAGAGACGACTGCGCGATCAGAAAGGACGGAGTCGAACGCGTTGTGGGCCCACCCTGCGCCAATATGAAAAGTACTACGATGAGGGCTATAAAATTCGCCCAAGAAGAGAAAAGAAAGCACCAAAAAATCATAAAGAAAAAAATAGGGTTAGCAGCAAACAATTTTGGGAGAGCGCCGCCACACTTCATCTTCTTCCTCCTCATAGCGATAGTTGAGAGGATCAGTTTTCACAGCCACCACAAGGAACGCGGTGAACCGAAGCTCGACAAGGAAGAGGATCTCACCGCTGCTTCCATTGCCATCTGCAATATCAGCGATACACCTTCACTGTCGGCGAGCAGGACACTCTTGCCGACAGCTTCTTCTTTCAATCTCTTTATTATTAAATGCACTGTTGATGAATGA

Protein sequence

MSSQPCVKDYINAWLIKTKPMILENPTMIVVPEYFQYHEPLDRDDCAIRKDGVERVVGPPCANMKSTTMRAIKFAQEEKRKHQKIIKKKIGLAANNFGRAPPHFIFFLLIAIVERISFHSHHKERGEPKLDKEEDLTAASIAICNISDTPSLSASRTLLPTASSFNLFIIKCTVDE
Homology
The following BLAST results are available for this feature:
BLAST of HG10007781.1 vs.
Match NameE-valueIdentityDescription
BLAST of HG10007781.1 vs.
Match NameE-valueIdentityDescription
BLAST of HG10007781.1 vs.
Match NameE-valueIdentityDescription
BLAST of HG10007781.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
HG10007781HG10007781gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
HG10007781.1-cdsHG10007781.1-cds-Chr10:13014461..13014472CDS
HG10007781.1-cdsHG10007781.1-cds-Chr10:13014923..13015441CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
HG10007781.1HG10007781.1-proteinpolypeptide