HG10006831.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCCTGTTTGGAAGCTTGTGAGTGAATTCTACATAAATGTAGCTGCCGAAAATTTTTACAAAATCTTCAAAGAACAAAGTTTCCATCTTCCAAATATTTCCCCAAAATTCGTCAAACAAGTTGAAGTTGATGAAGGTGATTGGGATAATCATGGTCACGGCTCTATTAAGATATGGAATTACACTACTGCTGGTAAGTTTACAAGCGAAAACGACCACTTAAAACATGTTTGTGAGTGATTTTAAAATGATTTAAATATCTTTTTCATATATTAGAAATCACTTTCTAACTTCTCGTTGATCATTCAAAAAAAAAAAAAAATTATGTCTGATTTTATAGCCTTATTCAAGATTTCCATTAACTCAAAAGTGATTTTAAATGATTAAAGTGTGTTTTGGAGTGATTTCGAAGATGACAAATGTGTGTATATTAATCATTTGAAAATCACTCCAAACATGTCTCTACAAAATCAATTTTGATTGTATGAAAATTGAATGTAAGATCAGTGTATAATCAAATAATAACATGATTTTAAATAATTAAATATATGTTTGGACATGATGATTTCAACCATTTCAAAATCATTCCAAATATTCTCTAATTTTTATTTCAATTTGTTAAATTAATGAATAATCTTCATCTTCTAAGCTCATGCATTCCATTTCAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCATGTGTGATTTGTTTAGATGGTAAAGCTGAAGTTTTAAAAGAGCAAGTGGAACTCGACGATGAGAAACTAATGGTAATGAAGATTGGATTAGAAGGGGATGTCCTCAATTATAACAAAACCATCAAAGCTATATATCAAGTCGTGCCAAAGGGTCAAAAACTTAGCTTATTAATTCTGACAATTGAATATGAGAAACTCAATGATGACTCTCCTCATCCTTACAAATATATCGATTTTATGATCGGTGTGACCAAAGATATCGAAACTCACCTCAAATAA ATGTCTCCTGTTTGGAAGCTTGTGAGTGAATTCTACATAAATGTAGCTGCCGAAAATTTTTACAAAATCTTCAAAGAACAAAGTTTCCATCTTCCAAATATTTCCCCAAAATTCGTCAAACAAGTTGAAGTTGATGAAGGTGATTGGGATAATCATGGTCACGGCTCTATTAAGATATGGAATTACACTACTGCTGATGGTAAAGCTGAAGTTTTAAAAGAGCAAGTGGAACTCGACGATGAGAAACTAATGGTAATGAAGATTGGATTAGAAGGGGATGTCCTCAATTATAACAAAACCATCAAAGCTATATATCAAGTCGTGCCAAAGGGTCAAAAACTTAGCTTATTAATTCTGACAATTGAATATGAGAAACTCAATGATGACTCTCCTCATCCTTACAAATATATCGATTTTATGATCGGTGTGACCAAAGATATCGAAACTCACCTCAAATAA ATGTCTCCTGTTTGGAAGCTTGTGAGTGAATTCTACATAAATGTAGCTGCCGAAAATTTTTACAAAATCTTCAAAGAACAAAGTTTCCATCTTCCAAATATTTCCCCAAAATTCGTCAAACAAGTTGAAGTTGATGAAGGTGATTGGGATAATCATGGTCACGGCTCTATTAAGATATGGAATTACACTACTGCTGATGGTAAAGCTGAAGTTTTAAAAGAGCAAGTGGAACTCGACGATGAGAAACTAATGGTAATGAAGATTGGATTAGAAGGGGATGTCCTCAATTATAACAAAACCATCAAAGCTATATATCAAGTCGTGCCAAAGGGTCAAAAACTTAGCTTATTAATTCTGACAATTGAATATGAGAAACTCAATGATGACTCTCCTCATCCTTACAAATATATCGATTTTATGATCGGTGTGACCAAAGATATCGAAACTCACCTCAAATAA MSPVWKLVSEFYINVAAENFYKIFKEQSFHLPNISPKFVKQVEVDEGDWDNHGHGSIKIWNYTTADGKAEVLKEQVELDDEKLMVMKIGLEGDVLNYNKTIKAIYQVVPKGQKLSLLILTIEYEKLNDDSPHPYKYIDFMIGVTKDIETHLK Homology
BLAST of HG10006831.1 vs. NCBI nr
Match: XP_008464726.1 (PREDICTED: MLP-like protein 329 [Cucumis melo] >KAA0041020.1 MLP-like protein 329 [Cucumis melo var. makuwa] >TYK20379.1 MLP-like protein 329 [Cucumis melo var. makuwa]) HSP 1 Score: 240.7 bits (613), Expect = 8.0e-60 Identity = 114/146 (78.08%), Postives = 130/146 (89.04%), Query Frame = 0
BLAST of HG10006831.1 vs. NCBI nr
Match: XP_038893022.1 (MLP-like protein 328 [Benincasa hispida]) HSP 1 Score: 239.2 bits (609), Expect = 2.3e-59 Identity = 116/147 (78.91%), Postives = 130/147 (88.44%), Query Frame = 0
BLAST of HG10006831.1 vs. NCBI nr
Match: XP_022155164.1 (MLP-like protein 329 [Momordica charantia]) HSP 1 Score: 214.2 bits (544), Expect = 8.1e-52 Identity = 99/152 (65.13%), Postives = 121/152 (79.61%), Query Frame = 0
BLAST of HG10006831.1 vs. NCBI nr
Match: XP_022155179.1 (MLP-like protein 328 [Momordica charantia]) HSP 1 Score: 213.4 bits (542), Expect = 1.4e-51 Identity = 102/152 (67.11%), Postives = 122/152 (80.26%), Query Frame = 0
BLAST of HG10006831.1 vs. NCBI nr
Match: XP_022150052.1 (MLP-like protein 328 [Momordica charantia]) HSP 1 Score: 210.7 bits (535), Expect = 8.9e-51 Identity = 99/152 (65.13%), Postives = 119/152 (78.29%), Query Frame = 0
BLAST of HG10006831.1 vs. ExPASy Swiss-Prot
Match: Q9ZVF3 (MLP-like protein 328 OS=Arabidopsis thaliana OX=3702 GN=MLP328 PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 5.8e-21 Identity = 53/144 (36.81%), Postives = 84/144 (58.33%), Query Frame = 0
BLAST of HG10006831.1 vs. ExPASy Swiss-Prot
Match: Q9ZVF2 (MLP-like protein 329 OS=Arabidopsis thaliana OX=3702 GN=MLP329 PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 2.9e-20 Identity = 53/144 (36.81%), Postives = 84/144 (58.33%), Query Frame = 0
BLAST of HG10006831.1 vs. ExPASy Swiss-Prot
Match: Q9SSK5 (MLP-like protein 43 OS=Arabidopsis thaliana OX=3702 GN=MLP43 PE=1 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.0e-17 Identity = 55/152 (36.18%), Postives = 86/152 (56.58%), Query Frame = 0
BLAST of HG10006831.1 vs. ExPASy Swiss-Prot
Match: Q941R6 (MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2) HSP 1 Score: 90.1 bits (222), Expect = 2.3e-17 Identity = 53/148 (35.81%), Postives = 86/148 (58.11%), Query Frame = 0
BLAST of HG10006831.1 vs. ExPASy Swiss-Prot
Match: Q9SSK7 (MLP-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=MLP34 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.1e-17 Identity = 52/147 (35.37%), Postives = 84/147 (57.14%), Query Frame = 0
BLAST of HG10006831.1 vs. ExPASy TrEMBL
Match: A0A5D3DA48 (MLP-like protein 329 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00840 PE=3 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 3.9e-60 Identity = 114/146 (78.08%), Postives = 130/146 (89.04%), Query Frame = 0
BLAST of HG10006831.1 vs. ExPASy TrEMBL
Match: A0A1S3CM84 (MLP-like protein 329 OS=Cucumis melo OX=3656 GN=LOC103502542 PE=3 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 3.9e-60 Identity = 114/146 (78.08%), Postives = 130/146 (89.04%), Query Frame = 0
BLAST of HG10006831.1 vs. ExPASy TrEMBL
Match: A0A6J1DPG0 (MLP-like protein 329 OS=Momordica charantia OX=3673 GN=LOC111022305 PE=3 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.9e-52 Identity = 99/152 (65.13%), Postives = 121/152 (79.61%), Query Frame = 0
BLAST of HG10006831.1 vs. ExPASy TrEMBL
Match: A0A6J1DPH9 (MLP-like protein 328 OS=Momordica charantia OX=3673 GN=LOC111022314 PE=3 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 6.6e-52 Identity = 102/152 (67.11%), Postives = 122/152 (80.26%), Query Frame = 0
BLAST of HG10006831.1 vs. ExPASy TrEMBL
Match: A0A6J1D9N8 (MLP-like protein 328 OS=Momordica charantia OX=3673 GN=LOC111018321 PE=3 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 4.3e-51 Identity = 99/152 (65.13%), Postives = 119/152 (78.29%), Query Frame = 0
BLAST of HG10006831.1 vs. TAIR 10
Match: AT1G14950.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 111.3 bits (277), Expect = 6.8e-25 Identity = 59/144 (40.97%), Postives = 89/144 (61.81%), Query Frame = 0
BLAST of HG10006831.1 vs. TAIR 10
Match: AT1G14930.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 107.5 bits (267), Expect = 9.9e-24 Identity = 57/146 (39.04%), Postives = 88/146 (60.27%), Query Frame = 0
BLAST of HG10006831.1 vs. TAIR 10
Match: AT3G26460.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 103.6 bits (257), Expect = 1.4e-22 Identity = 51/144 (35.42%), Postives = 83/144 (57.64%), Query Frame = 0
BLAST of HG10006831.1 vs. TAIR 10
Match: AT4G23680.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 102.4 bits (254), Expect = 3.2e-22 Identity = 55/144 (38.19%), Postives = 84/144 (58.33%), Query Frame = 0
BLAST of HG10006831.1 vs. TAIR 10
Match: AT2G01520.1 (MLP-like protein 328 ) HSP 1 Score: 102.1 bits (253), Expect = 4.2e-22 Identity = 53/144 (36.81%), Postives = 84/144 (58.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|