HG10006445.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006445.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING-type domain-containing protein
Location	Chr07: 18641183 .. 18645218 (-)
Sequence length	840
RNA-Seq Expression	HG10006445.1
Synteny	HG10006445.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGAAAGGGCCATGGAACTGCAGAGCACGGCGCCAATGGAGATAACGACGAGCAGTTCCTCTTCCGACGATACGAACCCTTGCCCGATCTGCCTCGGACCCATAATTCAACCTTCCTATCTCGATAAATGCTTCCGTACGTCTTTCTTTCTCTCAATCTGATCCTTCTTTTGTTTTTCTTGAATTTTCCAGTCACCTAAACAGAAATTAATTAAGAAAAATTGTTCGTTCGTATGAATTGGGGTTTCATTTTTCCGATTATTATAGTGACCCACTTGGAAATAATCCATTATGTGTTACTGTATCATCTGAAGAAGTAAGAACCACTCTGTTGTCCTTTTAGGGAATTTCAGCTTTTAGCTCTTCCCCAATTATCAAGGTTTCTGCCACTGTTATTCCTATTTGATGAACGAAATTGTTTAATGATTATAGTATCTTGAAAGATAATTAACTGGATTCATTTGGTATAAAGATAAACTAGCTAATTCTTTAGCTTTGAATGGACATAAAGTTCTTCTGGAGATGCTTAATTTGATCCAATATACTAAGTTCTTTAGTGGTGTATGCTTTAAGCAAGCCATTTAGAGTGTTTATTATGGCATCTTCTTCTTCGAGGAAAACAGAAACACCACCGAGAATGCTTTAGATTTCCTTGATATGTTGAATGTAATCATCGATGAACTCTACTATCTTTGAGATGAATATGTTCATTTAATTTATTTTTAATATACTTCCTTATGTCTGGGCTTGAATATTAGTTTCGATTATGTTGTGCAATGCATGGAATATCAAAATGAAAGAGGAAATATCATTTATATTTTACATTTGGTATCATGTTGATTACCAATAATTTCCAAAGTTTAAGCCTTAAAGTTTGGGTGAATTTGATCATTTGATTAATTCTAAAGAATCTATTTGTTCATTCATGTTAAGTACAACATACCATGTAGGAAAAAAAAAAAAGGATCGTCGATAAACTTTGTTGAGGAGTTTGAATGGTTTTTAGGTTTTAACTCTATTTCTCTGTCTTGCAGATAAATTTTGTTACAATTGCATTGTACAATGGACCAAAGTGGTTTCTGGGAAGCACTCCTGCACACTTTCGTCCATTAAATGTCCTTTATGCAAGGTTCAATTTTCCTTCCCCTGTTAATCTTGTTTTATTGTAGCATTCTATACTTTCTGTATTCCATTTCTTATTTTCTTATAATTAATCACCAGACAGAAAGTTCTTCTATAATACATGGATTAGATGGACACTGTTTCCAAAGACATTATGTTAATCGGGATTTTCAGGATAGGTATCTTCCTGTTGATACTTCCCCTAGGTTTTCTATTCTTATTTTCTCTGCTTTAATTGACTGTGGTTTATAATCAATGCTATTTGCAGCTTTATCTTATCAAAAGCTCACAAGTATAGATTACAATGCTATTATACTGAACCAGGTTCGTCTTTTGTTTATCATTTCACTCATTATGTGATGATGCTCCGACATTTACATTCGGTTACTTGGGTTTATGAATTTCCCTAATTGTCTACATGTAGGTTTCTTGGATGACATATTTGATGTAAAGAGGTACTGGAAGTTACGGAAGTATCTCCAGGCAAACCAGTGGCTTGAAGTTTGGTTGAAAAGGGAACTTCAAGCTTTGATTCAGGTTCCTCTTAGTTTCTTACATCACATTTACACTTCTATGGGATATTGCTTCCTTTTGCCCCTTTTTTGTTCTTGGAGAATTGTTTACATCCAATATCAAACAACATTATCAAGAGTCAAGACCAAATAGTTGGGTGGAAAGGGACAAAGCTCTCCATTCCTCATTCCTACGTTCTCCTACGGTCAGATTCTTGGGGAATGAATTCTATTACTGCACCTAGTAGTTAATGAAATTCTTAATTCCAAAATGTCCTCAGTATCAAATAACGAAAAATAGGGTAGGCTCATACAAAGATAGGGGAGGGATGGGGTTTCTCCCATTTGTGGCATAGTGGCCCCTAGGAGGTTGTCTCCTCTAAGGAGGGTATATGTTGATTGAGGATTTGAGAACTCTTTTTTATTTCAATGGTGAGGAAAACTATGTGTACTGTGGCAAAATGAGGTAAAGATGCGTCACTTTTAACTGTGAGGATTTTGAGAACTCTGTTTTAGTAGAGAAGGGATTACTCTAGACAAAACAGGATAGCATTAGTAGATAGGGATATTGTCAAAAATAACCCTAAAATGTTTTCATTTGTCACAACTAGCACCCTTTTGGAGAACTTGTTGGAATAGTTTTTCTCGGTCCTTCTCGGTCGAGATAAACCTCGAGATCCGAATAAAAGTGTAACTTATTTCTATCGTACATCCAAACTATCGATTTTTTAGACTTTATTGGTGGATTTCCAGACAGGACGAAGACCGAGATTGTATGTAATCTTCTCGAATCTTATGTAATCTTTCCAAAATCTTGCGTAATCTTTCTCAAATCTTATGTAATCTTTTCAAATCTTCTTCAAAATCTCAAATATTACTCCCAATTAATGTTTCCACATTTGTCTGAATTGGGAATTTCAAATGGATCTACGAATATTTTGTTGTTTCCCCCTTTAATCGATTGTGTTGTGTGGCTGTCCACGAAAGAAAATCGAATCTCGAGGCAATCATTGTGTGGTTTCTTCTTTTTCAAAGAAGTTAAATTTTGGGAAAGATTAAATTTTGAGAAAGATTGTATAAGATTTGGAAAAATTACATATGTTTCGGGTCTTCATCTTAACCAAGATTCAACCAAGAAAGTCCAAAAAAAATTGATGGTTTGGACGTGTGATGAAAAGAAGTTGAACTTTTATTCAAATCTTGGGGTCGATCTTGGCCGGAAATGGCCGAGAAAAACTATTATAATGAATTGCCAAAAAGGGTGTTAATCGTAAAAGATGGAAATTTTTTGGGGTTATTTCTGATAATTTTCCTAGTAGATGTATGATACCATTTCTTTGGCATAGTTTCTTGATTTATCCACTCTATTTCTCTCCATTAGAGTTCATTGTGGTTGATGACTGATAGTGTCTCCTTCCCTTTGACAGGAAGAAGATGTTGACATAATTATGCACCACCTACATGGTTTAATTAATTCATTTTTTAGTAGGTAATAATCATTCGTTATTGCATTCTATACTTTGGTCAAATAGAAAATTGGATAAAAAACACGACTTTCGTAGATAGTCTCTAAACTTTAGTTTGTAACAAGTCTTTGTGAAATTTAGTATGTAACAATCTAGTTCTTGTACTTTCATTTTTGTAATAATATACTGCTCATATCATGAAAATTATTGCAAGATTTGATCTAATTCTTTACCCATGAAGAACGGTAAAATAATTAGGGACCAAATGTGTCTATAAATTATGAAGAACTAAGTCGTTACATAATTAAAATTGATGCTTAGTTTGATGAGAATTTTCATGGTAGAAACTAAATCATTACAATAAGTACAGAGACTAAATTGTTACGTGTTAAAGGTCAATGACTAAATTGTTACAAATTCGAAAGTATAGGGACAAAATTGTTACAAACCAAAGTTTAGGGATTTTTTTTTTTTTTAATGTTTTTCATTTCGGTTTGGCATGTAGAATCTGTTGAAAGCACCCATTTTCATTCATCTCTTTGACTATCACCTATCCTCATGAATGTAAATAAATATGCATGATATGGTACCTGATTACACTCTGAAACCTGCTTCTTGTTCTCTGTCTTTCCTCAAAGAAATGAACCTAGGTATCAAACAGAAACTCCTGAACTGAAGAGAGAAAAGTTTAGCCACGTGATCCTTGATGCAGCAAAGCCATTCCTGTCAGCAAGAGCAGACCGATTCGTGCTCGAGTTGGAGCTGTTTCTTGCTTCGGGTTTGAACATCGAAGCCTATGATTCGGTTTACTTGCAACGGTTAGGCTGGAACGAGCCTGTAGTCCCAAGTGTGGCTATCAAAGAAGATCTTGGACTCAAACCTGTAACTCCATACTTGTATATCTTTGAATATGACCCTGATGATGGTGATTAA

mRNA sequence

ATGTCGGAAAGGGCCATGGAACTGCAGAGCACGGCGCCAATGGAGATAACGACGAGCAGTTCCTCTTCCGACGATACGAACCCTTGCCCGATCTGCCTCGGACCCATAATTCAACCTTCCTATCTCGATAAATGCTTCCATAAATTTTGTTACAATTGCATTGTACAATGGACCAAAGTGGTTTCTGGGAAGCACTCCTGCACACTTTCGTCCATTAAATGTCCTTTATGCAAGACAGAAAGTTCTTCTATAATACATGGATTAGATGGACACTGTTTCCAAAGACATTATGTTAATCGGGATTTTCAGGATAGCTTTATCTTATCAAAAGCTCACAAGTATAGATTACAATGCTATTATACTGAACCAGGTTTCTTGGATGACATATTTGATGTAAAGAGGTACTGGAAGTTACGGAAGTATCTCCAGGCAAACCAGTGGCTTGAAGTTTGGTTGAAAAGGGAACTTCAAGCTTTGATTCAGGAAGAAGATGTTGACATAATTATGCACCACCTACATGGTTTAATTAATTCATTTTTTAGTAGAAATGAACCTAGGTATCAAACAGAAACTCCTGAACTGAAGAGAGAAAAGTTTAGCCACGTGATCCTTGATGCAGCAAAGCCATTCCTGTCAGCAAGAGCAGACCGATTCGTGCTCGAGTTGGAGCTGTTTCTTGCTTCGGGTTTGAACATCGAAGCCTATGATTCGGTTTACTTGCAACGGTTAGGCTGGAACGAGCCTGTAGTCCCAAGTGTGGCTATCAAAGAAGATCTTGGACTCAAACCTGTAACTCCATACTTGTATATCTTTGAATATGACCCTGATGATGGTGATTAA

Coding sequence (CDS)

ATGTCGGAAAGGGCCATGGAACTGCAGAGCACGGCGCCAATGGAGATAACGACGAGCAGTTCCTCTTCCGACGATACGAACCCTTGCCCGATCTGCCTCGGACCCATAATTCAACCTTCCTATCTCGATAAATGCTTCCATAAATTTTGTTACAATTGCATTGTACAATGGACCAAAGTGGTTTCTGGGAAGCACTCCTGCACACTTTCGTCCATTAAATGTCCTTTATGCAAGACAGAAAGTTCTTCTATAATACATGGATTAGATGGACACTGTTTCCAAAGACATTATGTTAATCGGGATTTTCAGGATAGCTTTATCTTATCAAAAGCTCACAAGTATAGATTACAATGCTATTATACTGAACCAGGTTTCTTGGATGACATATTTGATGTAAAGAGGTACTGGAAGTTACGGAAGTATCTCCAGGCAAACCAGTGGCTTGAAGTTTGGTTGAAAAGGGAACTTCAAGCTTTGATTCAGGAAGAAGATGTTGACATAATTATGCACCACCTACATGGTTTAATTAATTCATTTTTTAGTAGAAATGAACCTAGGTATCAAACAGAAACTCCTGAACTGAAGAGAGAAAAGTTTAGCCACGTGATCCTTGATGCAGCAAAGCCATTCCTGTCAGCAAGAGCAGACCGATTCGTGCTCGAGTTGGAGCTGTTTCTTGCTTCGGGTTTGAACATCGAAGCCTATGATTCGGTTTACTTGCAACGGTTAGGCTGGAACGAGCCTGTAGTCCCAAGTGTGGCTATCAAAGAAGATCTTGGACTCAAACCTGTAACTCCATACTTGTATATCTTTGAATATGACCCTGATGATGGTGATTAA

Protein sequence

MSERAMELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLHGLINSFFSRNEPRYQTETPELKREKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD

Homology

[Close]

BLAST of HG10006445.1 vs. NCBI nr
Match: XP_038889020.1 (uncharacterized protein LOC120078783 isoform X1 [Benincasa hispida])

HSP 1 Score: 539.3 bits (1388), Expect = 2.0e-149
Identity = 257/277 (92.78%), Postives = 266/277 (96.03%), Query Frame = 0


Query: 1   MSERAMELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKV 60
           MSERAMELQSTAP+E  TSSS SDDTNPCPICLG IIQPSYLDKCFHKFCYNCI+QWTKV
Sbjct: 1   MSERAMELQSTAPVETATSSSFSDDTNPCPICLGLIIQPSYLDKCFHKFCYNCILQWTKV 60

Query: 61  VSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYY 120
           VSGKHSC LSSIKCPLCKTESSSIIHGLDGHC QRHYVNRDFQDSFILSKAHKYRLQCYY
Sbjct: 61  VSGKHSCMLSSIKCPLCKTESSSIIHGLDGHCLQRHYVNRDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLHGLINSFF 180
           TEPGFLDDIF+V+RYWKLRKYLQANQWLEVWLKRELQALIQEED+DIIMHHL G INSFF
Sbjct: 121 TEPGFLDDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDIDIIMHHLLGFINSFF 180

Query: 181 SRNEPRYQTETPELKREKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYL 240
           SRNEPRYQTETPELKRE F+ ++LDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYL
Sbjct: 181 SRNEPRYQTETPELKRETFNRMVLDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDD 278
           QRLGWNEPVVP +AIKEDLGLKPVTPYLYIFEYDPDD
Sbjct: 241 QRLGWNEPVVPIMAIKEDLGLKPVTPYLYIFEYDPDD 277

[Close]

BLAST of HG10006445.1 vs. NCBI nr
Match: XP_022150768.1 (uncharacterized protein LOC111018833 [Momordica charantia])

HSP 1 Score: 520.8 bits (1340), Expect = 7.4e-144
Identity = 248/279 (88.89%), Postives = 264/279 (94.62%), Query Frame = 0


Query: 1   MSERAMELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKV 60
           MSE AMELQSTA  E+ T+SSS DDTNPCPICLG II+PSYLDKCFHKFCYNCIVQWTKV
Sbjct: 1   MSESAMELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKV 60

Query: 61  VSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYY 120
           VSGK SC LS IKCPLCKTESSSIIHGLDGHCFQRHYVN+DFQDSFILSKAHKYRLQCYY
Sbjct: 61  VSGKRSCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLHGLINSFF 180
           TEPGFL+DIF+V+RYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHL GLIN FF
Sbjct: 121 TEPGFLEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180

Query: 181 SRNEPRYQTETPELKREKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYL 240
           SRNE +YQTE+PE+K+EKFS ++ DAAKPFLSARADRFV ELELFLASGLNIEAYDSVYL
Sbjct: 181 SRNEQKYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD 280
           QRLGW+EPVVPSVAIKEDLGLKPVTPYLYIF+YDPDDG+
Sbjct: 241 QRLGWSEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE 279

[Close]

BLAST of HG10006445.1 vs. NCBI nr
Match: XP_022946760.1 (uncharacterized protein LOC111450733 [Cucurbita moschata])

HSP 1 Score: 518.8 bits (1335), Expect = 2.8e-143
Identity = 246/274 (89.78%), Postives = 262/274 (95.62%), Query Frame = 0


Query: 6   MELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 65
           MELQ TAP+E+ TSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  SCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYYTEPGF 125
           SCTLSSIKCPLCKTES SIIHGLDGHCFQRHYVN+DFQDSFILSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLHGLINSFFSRNEP 185
           LDDIF V++YWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHL G I+SFFSRNEP
Sbjct: 121 LDDIFSVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEP 180

Query: 186 RYQTETPELKREKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGW 245
           RYQTETP+LKRE+F+ +ILDAAKPFLS RADRFVLELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRERFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 NEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD 280
           N+PV PS+A+ EDLG +PVTPYL+IF+YDPDDGD
Sbjct: 241 NKPVGPSMAV-EDLGHEPVTPYLFIFDYDPDDGD 273

[Close]

BLAST of HG10006445.1 vs. NCBI nr
Match: KAG7030255.1 (E3 ubiquitin-protein ligase Topors [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 518.5 bits (1334), Expect = 3.7e-143
Identity = 246/274 (89.78%), Postives = 262/274 (95.62%), Query Frame = 0


Query: 6   MELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 65
           MELQ TAP+E+ TSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  SCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYYTEPGF 125
           SCTLSSIKCPLCKTES SIIHGLDGHCFQRHYVN+DFQDSFILSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLHGLINSFFSRNEP 185
           LDDIF VK+YWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHL G I+SFFSRNEP
Sbjct: 121 LDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEP 180

Query: 186 RYQTETPELKREKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGW 245
           RYQTETP+LKRE+F+ +ILDAAKPFLS RADRFVLELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRERFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 NEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD 280
           N+PV PS+A+ E+LG +PVTPYL+IF+YDPDDGD
Sbjct: 241 NKPVGPSMAV-ENLGHEPVTPYLFIFDYDPDDGD 273

[Close]

BLAST of HG10006445.1 vs. NCBI nr
Match: XP_023545827.1 (uncharacterized protein LOC111805146 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 517.7 bits (1332), Expect = 6.2e-143
Identity = 245/274 (89.42%), Postives = 262/274 (95.62%), Query Frame = 0


Query: 6   MELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 65
           MELQ TAP+E+ TSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  SCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYYTEPGF 125
           SCTLSSIKCPLCKTES SIIHGLDGHCFQRHYVN+DFQDSFILSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLHGLINSFFSRNEP 185
           LDDIF V++YWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHL G I+SFFSRNEP
Sbjct: 121 LDDIFSVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEP 180

Query: 186 RYQTETPELKREKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGW 245
           RYQTETP+LKR++F+ +ILDAAKPFLS RADRFVLELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRDRFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 NEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD 280
           N+PV PS+A+ EDLG +PVTPYL+IF+YDPDDGD
Sbjct: 241 NKPVGPSMAV-EDLGHEPVTPYLFIFDYDPDDGD 273

[Close]

BLAST of HG10006445.1 vs. ExPASy Swiss-Prot
Match: Q80Z37 (E3 ubiquitin-protein ligase Topors OS=Mus musculus OX=10090 GN=Topors PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.9e-10
Identity = 36/112 (32.14%), Postives = 56/112 (50.00%), Query Frame = 0


Query: 11  TAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLS 70
           T+ ++ T  + +S D+  CPICL      SYLD+C HKFC+ C+ +W+K          +
Sbjct: 87  TSKLQQTVPADASPDSK-CPICLDRFDNVSYLDRCLHKFCFRCVQEWSK----------N 146

Query: 71  SIKCPLCKTESSSIIHGLDGHCFQRHYVNR-DFQDSFILSKAHKYRLQCYYT 122
             +CPLCK    SI H +      + YV R  +  SF   +  ++R +   T
Sbjct: 147 KAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFTNPEVRRFRYRTTMT 187

[Close]

BLAST of HG10006445.1 vs. ExPASy Swiss-Prot
Match: Q9NS56 (E3 ubiquitin-protein ligase Topors OS=Homo sapiens OX=9606 GN=TOPORS PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.0e-10
Identity = 34/111 (30.63%), Postives = 55/111 (49.55%), Query Frame = 0


Query: 11  TAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLS 70
           T+ ++ T  + +S D+  CPICL      SYLD+C HKFC+ C+ +W+K          +
Sbjct: 86  TSKLQQTVPADASPDSK-CPICLDRFDNVSYLDRCLHKFCFRCVQEWSK----------N 145

Query: 71  SIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYYT 122
             +CPLCK    SI H +      + YV R   +   ++   ++R +   T
Sbjct: 146 KAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFVTPDRRFRYRTTLT 185

[Close]

BLAST of HG10006445.1 vs. ExPASy Swiss-Prot
Match: P29129 (E3 ubiquitin-protein ligase ICP0 OS=Suid herpesvirus 1 (strain Indiana-Funkhauser / Becker) OX=31523 GN=EP0 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.7e-05
Identity = 24/61 (39.34%), Postives = 31/61 (50.82%), Query Frame = 0


Query: 29 CPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGL 88
          CPICL      +    C HKFC +CI +W          TL+S  CPLC    +SI+H +
Sbjct: 46 CPICLDVAATEAQTLPCMHKFCLDCIQRW----------TLTSTACPLCNARVTSILHHV 96

Query: 89 D 90
          D
Sbjct: 106 D 96

[Close]

BLAST of HG10006445.1 vs. ExPASy Swiss-Prot
Match: Q9E1W2 (E3 ubiquitin-protein ligase IE61 OS=Cercopithecine herpesvirus 9 (strain DHV) OX=36348 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.7e-05
Identity = 28/85 (32.94%), Postives = 37/85 (43.53%), Query Frame = 0


Query: 13 PMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSI 72
          P   T++S S   T  C IC+  I        C H FC+ CI  WT           +S 
Sbjct: 3  PPAYTSTSGSVASTGNCAICMSAISGLGKTLPCLHDFCFVCIQTWTS----------TSA 62

Query: 73 KCPLCKTESSSIIHGLDGHCFQRHY 98
          +CPLC+T  SSI+H +        Y
Sbjct: 63 QCPLCRTVVSSILHNITSDANYEEY 77

[Close]

BLAST of HG10006445.1 vs. ExPASy TrEMBL
Match: A0A6J1DAB4 (uncharacterized protein LOC111018833 OS=Momordica charantia OX=3673 GN=LOC111018833 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 3.6e-144
Identity = 248/279 (88.89%), Postives = 264/279 (94.62%), Query Frame = 0


Query: 1   MSERAMELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKV 60
           MSE AMELQSTA  E+ T+SSS DDTNPCPICLG II+PSYLDKCFHKFCYNCIVQWTKV
Sbjct: 1   MSESAMELQSTAQKEMETASSSYDDTNPCPICLGSIIRPSYLDKCFHKFCYNCIVQWTKV 60

Query: 61  VSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYY 120
           VSGK SC LS IKCPLCKTESSSIIHGLDGHCFQRHYVN+DFQDSFILSKAHKYRLQCYY
Sbjct: 61  VSGKRSCILSPIKCPLCKTESSSIIHGLDGHCFQRHYVNQDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLHGLINSFF 180
           TEPGFL+DIF+V+RYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHL GLIN FF
Sbjct: 121 TEPGFLEDIFNVQRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGLINPFF 180

Query: 181 SRNEPRYQTETPELKREKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYL 240
           SRNE +YQTE+PE+K+EKFS ++ DAAKPFLSARADRFV ELELFLASGLNIEAYDSVYL
Sbjct: 181 SRNEQKYQTESPEVKQEKFSSIVHDAAKPFLSARADRFVHELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD 280
           QRLGW+EPVVPSVAIKEDLGLKPVTPYLYIF+YDPDDG+
Sbjct: 241 QRLGWSEPVVPSVAIKEDLGLKPVTPYLYIFDYDPDDGE 279

[Close]

BLAST of HG10006445.1 vs. ExPASy TrEMBL
Match: A0A6J1G4Z2 (uncharacterized protein LOC111450733 OS=Cucurbita moschata OX=3662 GN=LOC111450733 PE=4 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.4e-143
Identity = 246/274 (89.78%), Postives = 262/274 (95.62%), Query Frame = 0


Query: 6   MELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 65
           MELQ TAP+E+ TSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  SCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYYTEPGF 125
           SCTLSSIKCPLCKTES SIIHGLDGHCFQRHYVN+DFQDSFILSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLHGLINSFFSRNEP 185
           LDDIF V++YWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHL G I+SFFSRNEP
Sbjct: 121 LDDIFSVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEP 180

Query: 186 RYQTETPELKREKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGW 245
           RYQTETP+LKRE+F+ +ILDAAKPFLS RADRFVLELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRERFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 NEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD 280
           N+PV PS+A+ EDLG +PVTPYL+IF+YDPDDGD
Sbjct: 241 NKPVGPSMAV-EDLGHEPVTPYLFIFDYDPDDGD 273

[Close]

BLAST of HG10006445.1 vs. ExPASy TrEMBL
Match: A0A6J1KC78 (uncharacterized protein LOC111493604 OS=Cucurbita maxima OX=3661 GN=LOC111493604 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.5e-142
Identity = 244/274 (89.05%), Postives = 262/274 (95.62%), Query Frame = 0


Query: 6   MELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 65
           MELQ TAP+E+ TSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH
Sbjct: 1   MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKH 60

Query: 66  SCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYYTEPGF 125
           SCTLSSIKCPLCKTES SIIHGLDGHCFQRHYVN+DFQDSFILSKA KYRLQCYYTEPGF
Sbjct: 61  SCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQCYYTEPGF 120

Query: 126 LDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLHGLINSFFSRNEP 185
           LDDIF+V++YWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHL G I+SFFSRNE 
Sbjct: 121 LDDIFNVQKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEH 180

Query: 186 RYQTETPELKREKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGW 245
           RYQTETP+LKR++F+ +ILDAAKPFLS RADRFVLELELFLASGLNIEAYDSVYLQRLGW
Sbjct: 181 RYQTETPQLKRDRFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGW 240

Query: 246 NEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD 280
           N+P  PS+A+ EDLGL+PVTPYL+IF+YDPDDGD
Sbjct: 241 NKPFGPSMAV-EDLGLEPVTPYLFIFDYDPDDGD 273

[Close]

BLAST of HG10006445.1 vs. ExPASy TrEMBL
Match: A0A0A0LLN5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021620 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 2.4e-140
Identity = 243/279 (87.10%), Postives = 259/279 (92.83%), Query Frame = 0


Query: 1   MSERAMELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKV 60
           MS ++MELQSTA ME+ T +S+SD TNPCPICLGPI Q SYLDKCFH FCYNCIVQWTKV
Sbjct: 1   MSGKSMELQSTASMEMETRTSTSDYTNPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV 60

Query: 61  VSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYY 120
           VSGK SCTLSSIKCPLCKTESSSIIHGLDGH FQRHYVN DFQDSFILSKAH+YRLQCYY
Sbjct: 61  VSGKRSCTLSSIKCPLCKTESSSIIHGLDGHNFQRHYVNPDFQDSFILSKAHRYRLQCYY 120

Query: 121 TEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLHGLINSFF 180
           TEPGFL+DIFDV+RYWKL+KYLQANQWLEVWLKRELQALIQEEDVDIIMHH  GLINSFF
Sbjct: 121 TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFLGLINSFF 180

Query: 181 SRNEPRYQTETPELKREKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYL 240
            RNEP YQTETPELKR++FS  ILDAAKPFLSARADRF+LELELFLASGLNIEAYDSVYL
Sbjct: 181 RRNEPEYQTETPELKRKRFSQTILDAAKPFLSARADRFILELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD 280
           QRLGWN+P+VPSVA +EDLGLK VTPYLYIF+ DPDDGD
Sbjct: 241 QRLGWNKPIVPSVANEEDLGLKSVTPYLYIFDCDPDDGD 279

[Close]

BLAST of HG10006445.1 vs. ExPASy TrEMBL
Match: A0A5D3D454 (RING zinc finger protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00310 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 2.2e-138
Identity = 242/277 (87.36%), Postives = 257/277 (92.78%), Query Frame = 0


Query: 1   MSERAMELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKV 60
           MSE++MELQS A MEI TS+S+SD T+PCPICLGPI Q SYLDKCFH FCYNCIVQWTKV
Sbjct: 1   MSEKSMELQSAASMEIKTSTSTSDYTDPCPICLGPINQSSYLDKCFHNFCYNCIVQWTKV 60

Query: 61  VSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYY 120
           VSGK SC LSSIKCPLCKTESSSIIHGLDGH FQRHYVN DFQDSFILSKAHKYRLQCYY
Sbjct: 61  VSGKRSCRLSSIKCPLCKTESSSIIHGLDGHHFQRHYVNPDFQDSFILSKAHKYRLQCYY 120

Query: 121 TEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLHGLINSFF 180
           TEPGFL+DIFDV+RYWKL+KYLQANQWLEVWLKRELQALIQEEDVDIIMHH  GLINSFF
Sbjct: 121 TEPGFLNDIFDVQRYWKLQKYLQANQWLEVWLKRELQALIQEEDVDIIMHHFVGLINSFF 180

Query: 181 SRNEPRYQTETPELKREKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYL 240
            RNEP+YQTETPELKR++FS  ILDAAKPFLSARADRF+LELELFLASGLNIEAYDSVYL
Sbjct: 181 RRNEPKYQTETPELKRKRFSQTILDAAKPFLSARADRFMLELELFLASGLNIEAYDSVYL 240

Query: 241 QRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDD 278
           QRLGWNEP+V SVA +EDLGLK VTPYLYIF+ DPDD
Sbjct: 241 QRLGWNEPIVLSVANEEDLGLKSVTPYLYIFDNDPDD 277

[Close]

BLAST of HG10006445.1 vs. TAIR 10
Match: AT3G05250.1 (RING/U-box superfamily protein )

HSP 1 Score: 298.9 bits (764), Expect = 4.2e-81
Identity = 152/277 (54.87%), Postives = 193/277 (69.68%), Query Frame = 0


Query: 12  APMEITTSSSSSD---DTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCT 71
           A  EI   S S D   D +PCPICLG  ++ SYLD CFHKFC+NCI QW KVVS K S  
Sbjct: 2   AAKEIAGGSGSIDDGSDFDPCPICLGQFLRESYLDTCFHKFCFNCIKQWIKVVSSKASKQ 61

Query: 72  LSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSKAHKYRLQCYYTEPGFLDD 131
            SS+ CPLCKTE+ SIIH  DG  F+RHY++ +  D F+L+K  +YRLQCYYTE GFL D
Sbjct: 62  RSSVTCPLCKTENLSIIHNYDGCSFERHYIDPNIPDGFVLTKEQRYRLQCYYTESGFLAD 121

Query: 132 IFDVKRYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLHGLINSFFSRNEPRYQ 191
           +FDV R+WKL+K+LQ N+ LE WL+RELQAL+QEEDVDI++HHL G++ SF  R + R +
Sbjct: 122 VFDVARFWKLQKFLQPNRCLEAWLRRELQALMQEEDVDIVLHHLVGVMESFCKRIKQRRK 181

Query: 192 TETPELK---REKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGW 251
            ET   +   +E+F  V+ +AA+PF+ AR DRFV ELELFLA+GLN+EAYD++Y Q L  
Sbjct: 182 QETRSAETTNQEQFKAVVSEAARPFVMARTDRFVDELELFLAAGLNLEAYDAIYKQGLEG 241

Query: 252 NEPVVPSVAIKEDLGLKP------VTPYLYIFEYDPD 277
           N       A +E   ++       VTPYL+IFE D D
Sbjct: 242 NNRREIGAASEEREEVEEHNVRTRVTPYLFIFEEDSD 278

[Close]

BLAST of HG10006445.1 vs. TAIR 10
Match: AT2G39100.1 (RING/U-box superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 6.3e-08
Identity = 64/270 (23.70%), Postives = 101/270 (37.41%), Query Frame = 0


Query: 29  CPICLGPIIQ---PSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIK--CPLCKT---- 88
           CPICL  + +    + +  C H +C  CI +W            SS K  CPLC T    
Sbjct: 39  CPICLENLTERRSAAVITVCKHGYCLACIRKW------------SSFKRNCPLCNTRFDS 98

Query: 89  ---------------------ESSSIIHGLDGHCFQRHYVNRD---FQDSFILSKAHKYR 148
                                +  ++ +  +    +R  + R     ++S   S+   +R
Sbjct: 99  WFIVSDFASRKYHKEQLPILRDRETLTYHRNNPSDRRRIIQRSRDVLENSSSRSRPLPWR 158

Query: 149 LQCYYTEPGFLDD--IFDVKRYWKLRKY-----------------LQANQW--------L 208
               +  PG + D  IF  K  W+   Y                 L  N +        +
Sbjct: 159 RS--FGRPGSVPDSVIFQRKLQWRASIYTKQLRAVRLHSRRLELSLAVNDYTKAKITERI 218

Query: 209 EVWLKRELQALIQEEDVDIIMHHLHGLINSFFSRNEPRYQTETPELKREKFSHVILDAAK 239
           E W++RELQA++ + D  +I+H    L      R   R   +T  L  ++ S     + +
Sbjct: 219 EPWIRRELQAVLGDPDPSVIVHFASALFIKRLERENNRQTGQTGMLVEDEVS-----SLR 278

[Close]

BLAST of HG10006445.1 vs. TAIR 10
Match: AT3G05670.1 (RING/U-box protein )

HSP 1 Score: 42.0 bits (97), Expect = 9.4e-04
Identity = 23/61 (37.70%), Postives = 29/61 (47.54%), Query Frame = 0


Query: 27  NPCPICLGPIIQ---PSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSS 85
           N C ICL           LD C H FC+ CI++W+KV S          +CPLCK    +
Sbjct: 411 NVCGICLSEEDMRRLKGTLDCCSHYFCFTCIMEWSKVES----------RCPLCKQRFRT 461

The following BLAST results are available for this feature:

BLAST of HG10006445.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889020.1	2.0e-149	92.78	uncharacterized protein LOC120078783 isoform X1 [Benincasa hispida]	[more]
XP_022150768.1	7.4e-144	88.89	uncharacterized protein LOC111018833 [Momordica charantia]	[more]
XP_022946760.1	2.8e-143	89.78	uncharacterized protein LOC111450733 [Cucurbita moschata]	[more]
KAG7030255.1	3.7e-143	89.78	E3 ubiquitin-protein ligase Topors [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023545827.1	6.2e-143	89.42	uncharacterized protein LOC111805146 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10006445.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q80Z37	2.9e-10	32.14	E3 ubiquitin-protein ligase Topors OS=Mus musculus OX=10090 GN=Topors PE=1 SV=1	[more]
Q9NS56	5.0e-10	30.63	E3 ubiquitin-protein ligase Topors OS=Homo sapiens OX=9606 GN=TOPORS PE=1 SV=1	[more]
P29129	1.7e-05	39.34	E3 ubiquitin-protein ligase ICP0 OS=Suid herpesvirus 1 (strain Indiana-Funkhause...	[more]
Q9E1W2	1.7e-05	32.94	E3 ubiquitin-protein ligase IE61 OS=Cercopithecine herpesvirus 9 (strain DHV) OX...	[more]

BLAST of HG10006445.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAB4	3.6e-144	88.89	uncharacterized protein LOC111018833 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1G4Z2	1.4e-143	89.78	uncharacterized protein LOC111450733 OS=Cucurbita moschata OX=3662 GN=LOC1114507...	[more]
A0A6J1KC78	1.5e-142	89.05	uncharacterized protein LOC111493604 OS=Cucurbita maxima OX=3661 GN=LOC111493604...	[more]
A0A0A0LLN5	2.4e-140	87.10	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021620 P...	[more]
A0A5D3D454	2.2e-138	87.36	RING zinc finger protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of HG10006445.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05250.1	4.2e-81	54.87	RING/U-box superfamily protein	[more]
AT2G39100.1	6.3e-08	23.70	RING/U-box superfamily protein	[more]
AT3G05670.1	9.4e-04	37.70	RING/U-box protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 29..77 e-value: 2.2E-4 score: 30.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 29..78 score: 11.95817
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 9..102 e-value: 4.9E-11 score: 43.9
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 29..77 e-value: 9.6E-9 score: 35.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR47692	RING/U-BOX SUPERFAMILY PROTEIN	coord: 12..277
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 24..85
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 45..54

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10006445	HG10006445	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10006445.1-cds	HG10006445.1-cds-Chr07:18641183..18641477	CDS
HG10006445.1-cds	HG10006445.1-cds-Chr07:18642093..18642154	CDS
HG10006445.1-cds	HG10006445.1-cds-Chr07:18643557..18643669	CDS
HG10006445.1-cds	HG10006445.1-cds-Chr07:18643770..18643825	CDS
HG10006445.1-cds	HG10006445.1-cds-Chr07:18643915..18643994	CDS
HG10006445.1-cds	HG10006445.1-cds-Chr07:18644087..18644181	CDS
HG10006445.1-cds	HG10006445.1-cds-Chr07:18645080..18645218	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10006445.1	HG10006445.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0046872	metal ion binding