HG10006101.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006101.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Auxin efflux carrier component
Location	Chr07: 13622878 .. 13623291 (-)
Sequence length	414
RNA-Seq Expression	HG10006101.1
Synteny	HG10006101.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAGCTGGGGAAATTTTAATAAGGTGCTGGAGGCCATGGTTCCTTTGTATTTTGCTTTGATTCTTGGCTATGTTTCTGGGAAGTGTAAGATCTTTGGCAATAAAGATCGCGACGCTATTAACAAATTTGTTTGTTTTTTCACTCTCCCTCTCTTCACATTTCAATTCATTTCCCAAGTCGACCCTTTTCATTTCAACTTACATTTCTTGGCCGCCGATGTCATTTCAAAGCTTATAATCCTTATTCCTTTGACCTTATGGGCTAAATACTGCCCCAAGGGAAGCTATGATTGGTCCATCACTGCCTTCTCTCTCTCCTCCCTCACTAATTCCCTCGTCATCGGTGTCCCGCTCGCTAAGGTCTTGTATGGCCAGACGGCTGTCGATCTCGTCGTCCAGGCAAGGATTTAG

mRNA sequence

ATGATAAGCTGGGGAAATTTTAATAAGGTGCTGGAGGCCATGGTTCCTTTGTATTTTGCTTTGATTCTTGGCTATGTTTCTGGGAAGTGTAAGATCTTTGGCAATAAAGATCGCGACGCTATTAACAAATTTGTTTGTTTTTTCACTCTCCCTCTCTTCACATTTCAATTCATTTCCCAAGTCGACCCTTTTCATTTCAACTTACATTTCTTGGCCGCCGATGTCATTTCAAAGCTTATAATCCTTATTCCTTTGACCTTATGGGCTAAATACTGCCCCAAGGGAAGCTATGATTGGTCCATCACTGCCTTCTCTCTCTCCTCCCTCACTAATTCCCTCGTCATCGGTGTCCCGCTCGCTAAGGTCTTGTATGGCCAGACGGCTGTCGATCTCGTCGTCCAGGCAAGGATTTAG

Coding sequence (CDS)

ATGATAAGCTGGGGAAATTTTAATAAGGTGCTGGAGGCCATGGTTCCTTTGTATTTTGCTTTGATTCTTGGCTATGTTTCTGGGAAGTGTAAGATCTTTGGCAATAAAGATCGCGACGCTATTAACAAATTTGTTTGTTTTTTCACTCTCCCTCTCTTCACATTTCAATTCATTTCCCAAGTCGACCCTTTTCATTTCAACTTACATTTCTTGGCCGCCGATGTCATTTCAAAGCTTATAATCCTTATTCCTTTGACCTTATGGGCTAAATACTGCCCCAAGGGAAGCTATGATTGGTCCATCACTGCCTTCTCTCTCTCCTCCCTCACTAATTCCCTCGTCATCGGTGTCCCGCTCGCTAAGGTCTTGTATGGCCAGACGGCTGTCGATCTCGTCGTCCAGGCAAGGATTTAG

Protein sequence

MISWGNFNKVLEAMVPLYFALILGYVSGKCKIFGNKDRDAINKFVCFFTLPLFTFQFISQVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPLAKVLYGQTAVDLVVQARI

Homology

[Close]

BLAST of HG10006101.1 vs. NCBI nr
Match: XP_023536981.1 (auxin efflux carrier component 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185.7 bits (470), Expect = 2.8e-43
Identity = 93/138 (67.39%), Postives = 108/138 (78.26%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MI W +  KVL AM PLYFAL+LGY S K  KIF  +  DAINK VC+FTLPLFTF+F S
Sbjct: 1   MIGWEDVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTS 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
            +DPFH N HF+AAD ISKL+I++ L  WAK   KGSY WSIT+FSLS+LTN+LVIGVPL
Sbjct: 61  HIDPFHLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPL 120

Query: 121 AKVLYGQTAVDLVVQARI 138
           AKV+YGQ AVDLVVQ  +
Sbjct: 121 AKVMYGQMAVDLVVQGSV 138

[Close]

BLAST of HG10006101.1 vs. NCBI nr
Match: XP_022966048.1 (auxin efflux carrier component 5 [Cucurbita maxima])

HSP 1 Score: 184.9 bits (468), Expect = 4.7e-43
Identity = 93/138 (67.39%), Postives = 107/138 (77.54%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MI W +  KVL AM PLYFAL+LGY S K  KIF  +  DAINK VC+FTLPLFTF F S
Sbjct: 1   MIGWEDVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFDFTS 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
            +DPFH N HF+AAD ISKL+I++ L  WAK   KGSY WSIT+FSLS+LTN+LVIGVPL
Sbjct: 61  HIDPFHLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPL 120

Query: 121 AKVLYGQTAVDLVVQARI 138
           AKV+YGQ AVDLVVQ  +
Sbjct: 121 AKVMYGQMAVDLVVQGSV 138

[Close]

BLAST of HG10006101.1 vs. NCBI nr
Match: XP_022937707.1 (auxin efflux carrier component 5 [Cucurbita moschata])

HSP 1 Score: 181.8 bits (460), Expect = 4.0e-42
Identity = 92/138 (66.67%), Postives = 107/138 (77.54%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MI W +  KVL AM PLYFAL+LGY S K  KIF  +  DAINK VC+FTLPLFTF+F S
Sbjct: 1   MIGWEDVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTS 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
            +DPFH N  F+AAD ISKL+I++ L  WAK   KGSY WSIT+FSLS+LTN+LVIGVPL
Sbjct: 61  HIDPFHLNFPFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPL 120

Query: 121 AKVLYGQTAVDLVVQARI 138
           AKV+YGQ AVDLVVQ  +
Sbjct: 121 AKVMYGQMAVDLVVQGSV 138

[Close]

BLAST of HG10006101.1 vs. NCBI nr
Match: KAG6586145.1 (Auxin efflux carrier component 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181.8 bits (460), Expect = 4.0e-42
Identity = 92/138 (66.67%), Postives = 107/138 (77.54%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MI W +  KVL AM PLYFAL+LGY S K  KIF  +  DAINK VC+FTLPLFTF+F S
Sbjct: 1   MIGWEDVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTS 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
            +DPFH N  F+AAD ISKL+I++ L  WAK   KGSY WSIT+FSLS+LTN+LVIGVPL
Sbjct: 61  HIDPFHLNFPFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPL 120

Query: 121 AKVLYGQTAVDLVVQARI 138
           AKV+YGQ AVDLVVQ  +
Sbjct: 121 AKVMYGQMAVDLVVQGSV 138

[Close]

BLAST of HG10006101.1 vs. NCBI nr
Match: KAA0049860.1 (putative auxin efflux carrier component 8 [Cucumis melo var. makuwa] >TYK02198.1 putative auxin efflux carrier component 8 [Cucumis melo var. makuwa])

HSP 1 Score: 179.5 bits (454), Expect = 2.0e-41
Identity = 91/137 (66.42%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MI W +  KV+ AM PLYFALILGY S K  KIF  +  DAINK VC+FTLPLFTF+F S
Sbjct: 1   MIGWEDVYKVVAAMAPLYFALILGYGSVKWWKIFSTQQCDAINKLVCYFTLPLFTFEFTS 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
            +DPFH N  F+AAD I KL+I++ L  W K   KGSY WSIT+FSLS+LTN+LVIGVPL
Sbjct: 61  HIDPFHLNFPFIAADAIGKLLIVLVLAFWTKCTTKGSYCWSITSFSLSTLTNALVIGVPL 120

Query: 121 AKVLYGQTAVDLVVQAR 137
           AKV+YG+ AVDLVVQAR
Sbjct: 121 AKVMYGEMAVDLVVQAR 137

[Close]

BLAST of HG10006101.1 vs. ExPASy Swiss-Prot
Match: Q9FFD0 (Auxin efflux carrier component 5 OS=Arabidopsis thaliana OX=3702 GN=PIN5 PE=2 SV=2)

HSP 1 Score: 171.8 bits (434), Expect = 5.4e-42
Identity = 89/138 (64.49%), Postives = 107/138 (77.54%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MI+ G+  KV+EAMVPLY ALILGY S K   IF     DAIN+ VC+FTLPLFT +F +
Sbjct: 1   MINCGDVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTA 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
            VDPF+ N  F+AADV+SK+II+  L LWAKY  KGSY WSIT+FSL +LTNSLV+GVPL
Sbjct: 61  HVDPFNMNYRFIAADVLSKVIIVTVLALWAKYSNKGSYCWSITSFSLCTLTNSLVVGVPL 120

Query: 121 AKVLYGQTAVDLVVQARI 138
           AK +YGQ AVDLVVQ+ +
Sbjct: 121 AKAMYGQQAVDLVVQSSV 138

[Close]

BLAST of HG10006101.1 vs. ExPASy Swiss-Prot
Match: Q5JLM1 (Probable auxin efflux carrier component 5a OS=Oryza sativa subsp. japonica OX=39947 GN=PIN5A PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 7.8e-33
Identity = 73/140 (52.14%), Postives = 96/140 (68.57%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MI WG+  KV+ A VPLYFAL LGY S +  +IF  +  DA+N+ V FF LP FTF+F  
Sbjct: 1   MIGWGDVYKVVAATVPLYFALFLGYGSVRWWRIFTREQCDAVNRLVAFFALPFFTFEFTL 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKG--SYDWSITAFSLSSLTNSLVIGV 120
             DPF  N   +AADVISK +I+  +  WA++  KG  +  WSIT+FSLS+LTNSLV+GV
Sbjct: 61  HTDPFQVNYRAVAADVISKAVIVAVIGAWARFMSKGGCAVSWSITSFSLSTLTNSLVVGV 120

Query: 121 PLAKVLYGQTAVDLVVQARI 138
           P+A+ +YG+ A  LVVQ  +
Sbjct: 121 PMARAMYGEWAQQLVVQLSV 140

[Close]

BLAST of HG10006101.1 vs. ExPASy Swiss-Prot
Match: Q9S7Z8 (Auxin efflux carrier component 3 OS=Arabidopsis thaliana OX=3702 GN=PIN3 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.5e-28
Identity = 65/135 (48.15%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MISW +   VL A++PLY A+IL Y S +  KIF       IN+FV  F +PL +F FIS
Sbjct: 1   MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
             +P+  NL F+AAD + K+I+L  L LWA +   GS +WSIT FSLS+L N+LV+G+PL
Sbjct: 61  TNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 121 AKVLYGQTAVDLVVQ 135
              +YG+ +  L+VQ
Sbjct: 121 LIAMYGEYSGSLMVQ 135

[Close]

BLAST of HG10006101.1 vs. ExPASy Swiss-Prot
Match: Q67UL3 (Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica OX=39947 GN=PIN1C PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 5.8e-28
Identity = 66/135 (48.89%), Postives = 91/135 (67.41%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MI+  +F  V+ AMVPLY A+IL Y S K  +IF       IN+FV  F +PL +F FIS
Sbjct: 1   MITGADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
             +P+  NL F+AAD + KLI+L  LTLW+    +GS +W+IT FSLS+L N+LV+G+PL
Sbjct: 61  TNNPYTMNLRFIAADTLQKLIVLALLTLWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPL 120

Query: 121 AKVLYGQTAVDLVVQ 135
            K +YG+ +  L+VQ
Sbjct: 121 LKGMYGEFSGSLMVQ 135

[Close]

BLAST of HG10006101.1 vs. ExPASy Swiss-Prot
Match: Q940Y5 (Auxin efflux carrier component 7 OS=Arabidopsis thaliana OX=3702 GN=PIN7 PE=1 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 7.6e-28
Identity = 64/135 (47.41%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MI+W +   VL A++PLY A+IL Y S +  KIF       IN+FV  F +PL +F FIS
Sbjct: 1   MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
             +P+  NL F+AAD + KLI+L  L +WA +   GS +WSIT FSLS+L N+LV+G+PL
Sbjct: 61  SNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 121 AKVLYGQTAVDLVVQ 135
              +YG+ +  L+VQ
Sbjct: 121 LIAMYGEYSGSLMVQ 135

[Close]

BLAST of HG10006101.1 vs. ExPASy TrEMBL
Match: A0A6J1HQQ5 (Auxin efflux carrier component OS=Cucurbita maxima OX=3661 GN=LOC111465776 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.3e-43
Identity = 93/138 (67.39%), Postives = 107/138 (77.54%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MI W +  KVL AM PLYFAL+LGY S K  KIF  +  DAINK VC+FTLPLFTF F S
Sbjct: 1   MIGWEDVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFDFTS 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
            +DPFH N HF+AAD ISKL+I++ L  WAK   KGSY WSIT+FSLS+LTN+LVIGVPL
Sbjct: 61  HIDPFHLNFHFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPL 120

Query: 121 AKVLYGQTAVDLVVQARI 138
           AKV+YGQ AVDLVVQ  +
Sbjct: 121 AKVMYGQMAVDLVVQGSV 138

[Close]

BLAST of HG10006101.1 vs. ExPASy TrEMBL
Match: A0A6J1FBZ5 (Auxin efflux carrier component OS=Cucurbita moschata OX=3662 GN=LOC111444027 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.9e-42
Identity = 92/138 (66.67%), Postives = 107/138 (77.54%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MI W +  KVL AM PLYFAL+LGY S K  KIF  +  DAINK VC+FTLPLFTF+F S
Sbjct: 1   MIGWEDVFKVLSAMAPLYFALVLGYGSVKWWKIFSTEQCDAINKLVCYFTLPLFTFEFTS 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
            +DPFH N  F+AAD ISKL+I++ L  WAK   KGSY WSIT+FSLS+LTN+LVIGVPL
Sbjct: 61  HIDPFHLNFPFIAADAISKLVIVLVLAFWAKCSSKGSYCWSITSFSLSTLTNALVIGVPL 120

Query: 121 AKVLYGQTAVDLVVQARI 138
           AKV+YGQ AVDLVVQ  +
Sbjct: 121 AKVMYGQMAVDLVVQGSV 138

[Close]

BLAST of HG10006101.1 vs. ExPASy TrEMBL
Match: A0A5A7U3L3 (Putative auxin efflux carrier component 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold617G00010 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 9.6e-42
Identity = 91/137 (66.42%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MI W +  KV+ AM PLYFALILGY S K  KIF  +  DAINK VC+FTLPLFTF+F S
Sbjct: 1   MIGWEDVYKVVAAMAPLYFALILGYGSVKWWKIFSTQQCDAINKLVCYFTLPLFTFEFTS 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
            +DPFH N  F+AAD I KL+I++ L  W K   KGSY WSIT+FSLS+LTN+LVIGVPL
Sbjct: 61  HIDPFHLNFPFIAADAIGKLLIVLVLAFWTKCTTKGSYCWSITSFSLSTLTNALVIGVPL 120

Query: 121 AKVLYGQTAVDLVVQAR 137
           AKV+YG+ AVDLVVQAR
Sbjct: 121 AKVMYGEMAVDLVVQAR 137

[Close]

BLAST of HG10006101.1 vs. ExPASy TrEMBL
Match: A0A6J1D820 (Auxin efflux carrier component OS=Momordica charantia OX=3673 GN=LOC111018220 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.3e-41
Identity = 89/138 (64.49%), Postives = 106/138 (76.81%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MI W +  KV+ AM PLYFAL LGY S +  KIF  +  DAINK VC+FTLPLFTF F S
Sbjct: 1   MIGWEDAYKVVAAMAPLYFALALGYGSVRWWKIFSTEQCDAINKLVCYFTLPLFTFDFTS 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
            +DPFH N  F+AAD ISKL+I++ L  WA+  PKGSY WSIT+FSLS+LTNSLV+GVPL
Sbjct: 61  HIDPFHLNFPFIAADAISKLLIVVVLAFWARCTPKGSYCWSITSFSLSTLTNSLVVGVPL 120

Query: 121 AKVLYGQTAVDLVVQARI 138
           AK++YGQ AVDLVVQ  +
Sbjct: 121 AKIMYGQMAVDLVVQGSV 138

[Close]

BLAST of HG10006101.1 vs. ExPASy TrEMBL
Match: A0A1J3HZJ0 (Auxin efflux carrier component OS=Noccaea caerulescens OX=107243 GN=LE_TR7880_c0_g1_i1_g.27217 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.6e-41
Identity = 90/138 (65.22%), Postives = 109/138 (78.99%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MISWG+  KV+EAMVPLY ALILGY S K  KIF     DAINK VC+FTLPLFT +F +
Sbjct: 1   MISWGDVYKVVEAMVPLYVALILGYGSVKWWKIFTRDQCDAINKLVCYFTLPLFTIEFTA 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
            +DPF+ N  F+AADV+SK+II+  + +WAKY  KGSY WSIT+FSL +LTNSLV+GVPL
Sbjct: 61  HIDPFNMNYRFIAADVLSKVIIVTVIAVWAKYSNKGSYCWSITSFSLCTLTNSLVVGVPL 120

Query: 121 AKVLYGQTAVDLVVQARI 138
           AK +YGQ AVDLVVQ+ +
Sbjct: 121 AKAMYGQQAVDLVVQSSV 138

[Close]

BLAST of HG10006101.1 vs. TAIR 10
Match: AT5G16530.1 (Auxin efflux carrier family protein )

HSP 1 Score: 171.8 bits (434), Expect = 3.8e-43
Identity = 89/138 (64.49%), Postives = 107/138 (77.54%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MI+ G+  KV+EAMVPLY ALILGY S K   IF     DAIN+ VC+FTLPLFT +F +
Sbjct: 1   MINCGDVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTA 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
            VDPF+ N  F+AADV+SK+II+  L LWAKY  KGSY WSIT+FSL +LTNSLV+GVPL
Sbjct: 61  HVDPFNMNYRFIAADVLSKVIIVTVLALWAKYSNKGSYCWSITSFSLCTLTNSLVVGVPL 120

Query: 121 AKVLYGQTAVDLVVQARI 138
           AK +YGQ AVDLVVQ+ +
Sbjct: 121 AKAMYGQQAVDLVVQSSV 138

[Close]

BLAST of HG10006101.1 vs. TAIR 10
Match: AT1G70940.1 (Auxin efflux carrier family protein )

HSP 1 Score: 125.6 bits (314), Expect = 3.2e-29
Identity = 65/135 (48.15%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MISW +   VL A++PLY A+IL Y S +  KIF       IN+FV  F +PL +F FIS
Sbjct: 1   MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
             +P+  NL F+AAD + K+I+L  L LWA +   GS +WSIT FSLS+L N+LV+G+PL
Sbjct: 61  TNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 121 AKVLYGQTAVDLVVQ 135
              +YG+ +  L+VQ
Sbjct: 121 LIAMYGEYSGSLMVQ 135

[Close]

BLAST of HG10006101.1 vs. TAIR 10
Match: AT1G73590.1 (Auxin efflux carrier family protein )

HSP 1 Score: 124.8 bits (312), Expect = 5.4e-29
Identity = 68/135 (50.37%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MI+  +F  V+ AMVPLY A+IL Y S K  KIF       IN+FV  F +PL +F FI+
Sbjct: 1   MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
             +P+  NL FLAAD + K+I+L  L LW K    GS DW+IT FSLS+L N+LV+G+PL
Sbjct: 61  ANNPYAMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPL 120

Query: 121 AKVLYGQTAVDLVVQ 135
            K +YG  + DL+VQ
Sbjct: 121 LKGMYGNFSGDLMVQ 135

[Close]

BLAST of HG10006101.1 vs. TAIR 10
Match: AT1G23080.1 (Auxin efflux carrier family protein )

HSP 1 Score: 124.8 bits (312), Expect = 5.4e-29
Identity = 64/135 (47.41%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MI+W +   VL A++PLY A+IL Y S +  KIF       IN+FV  F +PL +F FIS
Sbjct: 1   MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
             +P+  NL F+AAD + KLI+L  L +WA +   GS +WSIT FSLS+L N+LV+G+PL
Sbjct: 61  SNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 121 AKVLYGQTAVDLVVQ 135
              +YG+ +  L+VQ
Sbjct: 121 LIAMYGEYSGSLMVQ 135

[Close]

BLAST of HG10006101.1 vs. TAIR 10
Match: AT1G23080.2 (Auxin efflux carrier family protein )

HSP 1 Score: 124.8 bits (312), Expect = 5.4e-29
Identity = 64/135 (47.41%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 1   MISWGNFNKVLEAMVPLYFALILGYVSGK-CKIFGNKDRDAINKFVCFFTLPLFTFQFIS 60
           MI+W +   VL A++PLY A+IL Y S +  KIF       IN+FV  F +PL +F FIS
Sbjct: 1   MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  QVDPFHFNLHFLAADVISKLIILIPLTLWAKYCPKGSYDWSITAFSLSSLTNSLVIGVPL 120
             +P+  NL F+AAD + KLI+L  L +WA +   GS +WSIT FSLS+L N+LV+G+PL
Sbjct: 61  SNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 121 AKVLYGQTAVDLVVQ 135
              +YG+ +  L+VQ
Sbjct: 121 LIAMYGEYSGSLMVQ 135

The following BLAST results are available for this feature:

BLAST of HG10006101.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536981.1	2.8e-43	67.39	auxin efflux carrier component 5 [Cucurbita pepo subsp. pepo]	[more]
XP_022966048.1	4.7e-43	67.39	auxin efflux carrier component 5 [Cucurbita maxima]	[more]
XP_022937707.1	4.0e-42	66.67	auxin efflux carrier component 5 [Cucurbita moschata]	[more]
KAG6586145.1	4.0e-42	66.67	Auxin efflux carrier component 5, partial [Cucurbita argyrosperma subsp. sororia...	[more]
KAA0049860.1	2.0e-41	66.42	putative auxin efflux carrier component 8 [Cucumis melo var. makuwa] >TYK02198.1...	[more]

BLAST of HG10006101.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFD0	5.4e-42	64.49	Auxin efflux carrier component 5 OS=Arabidopsis thaliana OX=3702 GN=PIN5 PE=2 SV...	[more]
Q5JLM1	7.8e-33	52.14	Probable auxin efflux carrier component 5a OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9S7Z8	4.5e-28	48.15	Auxin efflux carrier component 3 OS=Arabidopsis thaliana OX=3702 GN=PIN3 PE=1 SV...	[more]
Q67UL3	5.8e-28	48.89	Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica OX=39...	[more]
Q940Y5	7.6e-28	47.41	Auxin efflux carrier component 7 OS=Arabidopsis thaliana OX=3702 GN=PIN7 PE=1 SV...	[more]

BLAST of HG10006101.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQQ5	2.3e-43	67.39	Auxin efflux carrier component OS=Cucurbita maxima OX=3661 GN=LOC111465776 PE=3 ...	[more]
A0A6J1FBZ5	1.9e-42	66.67	Auxin efflux carrier component OS=Cucurbita moschata OX=3662 GN=LOC111444027 PE=...	[more]
A0A5A7U3L3	9.6e-42	66.42	Putative auxin efflux carrier component 8 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A6J1D820	1.3e-41	64.49	Auxin efflux carrier component OS=Momordica charantia OX=3673 GN=LOC111018220 PE...	[more]
A0A1J3HZJ0	1.6e-41	65.22	Auxin efflux carrier component OS=Noccaea caerulescens OX=107243 GN=LE_TR7880_c0...	[more]

BLAST of HG10006101.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16530.1	3.8e-43	64.49	Auxin efflux carrier family protein	[more]
AT1G70940.1	3.2e-29	48.15	Auxin efflux carrier family protein	[more]
AT1G73590.1	5.4e-29	50.37	Auxin efflux carrier family protein	[more]
AT1G23080.1	5.4e-29	47.41	Auxin efflux carrier family protein	[more]
AT1G23080.2	5.4e-29	47.41	Auxin efflux carrier family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004776	Membrane transport protein	PFAM	PF03547	Mem_trans	coord: 10..135 e-value: 1.1E-34 score: 119.6
None	No IPR available	PANTHER	PTHR31752:SF2	AUXIN EFFLUX CARRIER COMPONENT 5	coord: 1..136
None	No IPR available	PANTHER	PTHR31752	AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED	coord: 1..136

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10006101	HG10006101	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10006101.1-cds	HG10006101.1-cds-Chr07:13622878..13623291	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10006101.1	HG10006101.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0010315	auxin efflux
biological_process	GO:0010252	auxin homeostasis
biological_process	GO:0009926	auxin polar transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0010329	auxin efflux transmembrane transporter activity