HG10003514.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10003514.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	TMV resistance protein N-like
Location	Chr08: 2613759 .. 2615126 (+)
Sequence length	705
RNA-Seq Expression	HG10003514.1
Synteny	HG10003514.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAAGGAATGTACATTTTCATAAGTATGAACCCAAGCAAAAAGAAGATAAAAGAAGACAAGATTTGTGTATACAAGAGTGGGTAGAGGAACAAAATTCAAATGCTCATCCTCAAGAAGATTCAACTTCTACTTCAAATATGGAAAGCAGCCTCACTTTGCAACTCAAGGAAACCATTCCTTCTTTCCTTCAAAAGGATTTAAAGGTCCATTATCTCTCTCTCTCTTTCTTAATACTATTTCTTGTAGAATCTCTTTCTTTATTGTTGTTATGCATTTCCTCATTAATTAATATTCTTTCTCTTATGCTTAATGCATTCAATCATGGGTTAATATATCATTCGGTACCTATTTAGTTTTTAGTTATGAAAATTAACCCTATAAACACCTTTTTCTTATCTAAATTTCTTGCCTTTGTTATCTACCTTTCTACCAATGTTTTAAAAAACAAAACTAAATTTGGAAAACTAAAAAAAGTAGTTATTAATTTATTTATTTATTTAATTAGAATTTGGTTAAAAATTCAACTATTAGCTTTTACTTAATAAAGATGAAAACCATTATAGGCTTAATTTTAAAAAACCAAGTTTCCAATCAAGGTCTAAATTAATACATTTGCTTGCAACCTCTCTTTCGCCAAGGATTATTTGATGACATTAGAAATTATGGTGGATAATTTTATATTGTTAGATATACGAGAGAGACCAAAAATTATGATTTAACCATGTTTTATATGGAGCATGCAGCCACATTCAATAGACCTTCCTCTAATTTTCTCATTCTTATGCATATTATTAGACCATTCCTTAATTTTCTCATACTTATTATTCTTATACATTAACTAGTCAAATTACTTAACATTTTCACAGGATCGATTTGGAAATACGTTTGACTTTATTATTCCAAGGCAAAACTTCCCCCAGCTGTTTAATGAAACTTCTCCAAAGAAATATACAAGCATCCAACTGCCTCCAAATTTGTATACTAATAATGATTGGATGGGATTTGCAGTTTGCACACTCTTCCAAATCAACAAACATCCAACAGCAATTCTCAACAATCTTGGTTCAGTTTCAAGGAATGAACTCATTTGTCATTTTGCAATTGAGAATGGACTAATTGAACCATTACACGTTCATAGGATCACTGAGGACAGATTGATTTGGCTACATGAACGCCAGTTTGTTTGGCTTTATTACAGCCCAAGAAACATATATGGTAACATTTTTCGCCACAGGTCATATGTTTGTGCTATTATTGAAGCTGATACCCCTGACTTGATGGTAAGATGTAGTGGACTTCAATTAATGTACAAGCAAGATGTGGAAGTGATTGACAAGATATTGATGGAAGCCATACAATCGTAA

mRNA sequence

ATGTTAAGGAATGTACATTTTCATAAGTATGAACCCAAGCAAAAAGAAGATAAAAGAAGACAAGATTTGTGTATACAAGAGTGGGTAGAGGAACAAAATTCAAATGCTCATCCTCAAGAAGATTCAACTTCTACTTCAAATATGGAAAGCAGCCTCACTTTGCAACTCAAGGAAACCATTCCTTCTTTCCTTCAAAAGGATTTAAAGGATCGATTTGGAAATACGTTTGACTTTATTATTCCAAGGCAAAACTTCCCCCAGCTGTTTAATGAAACTTCTCCAAAGAAATATACAAGCATCCAACTGCCTCCAAATTTGTATACTAATAATGATTGGATGGGATTTGCAGTTTGCACACTCTTCCAAATCAACAAACATCCAACAGCAATTCTCAACAATCTTGGTTCAGTTTCAAGGAATGAACTCATTTGTCATTTTGCAATTGAGAATGGACTAATTGAACCATTACACGTTCATAGGATCACTGAGGACAGATTGATTTGGCTACATGAACGCCAGTTTGTTTGGCTTTATTACAGCCCAAGAAACATATATGGTAACATTTTTCGCCACAGGTCATATGTTTGTGCTATTATTGAAGCTGATACCCCTGACTTGATGGTAAGATGTAGTGGACTTCAATTAATGTACAAGCAAGATGTGGAAGTGATTGACAAGATATTGATGGAAGCCATACAATCGTAA

Coding sequence (CDS)

ATGTTAAGGAATGTACATTTTCATAAGTATGAACCCAAGCAAAAAGAAGATAAAAGAAGACAAGATTTGTGTATACAAGAGTGGGTAGAGGAACAAAATTCAAATGCTCATCCTCAAGAAGATTCAACTTCTACTTCAAATATGGAAAGCAGCCTCACTTTGCAACTCAAGGAAACCATTCCTTCTTTCCTTCAAAAGGATTTAAAGGATCGATTTGGAAATACGTTTGACTTTATTATTCCAAGGCAAAACTTCCCCCAGCTGTTTAATGAAACTTCTCCAAAGAAATATACAAGCATCCAACTGCCTCCAAATTTGTATACTAATAATGATTGGATGGGATTTGCAGTTTGCACACTCTTCCAAATCAACAAACATCCAACAGCAATTCTCAACAATCTTGGTTCAGTTTCAAGGAATGAACTCATTTGTCATTTTGCAATTGAGAATGGACTAATTGAACCATTACACGTTCATAGGATCACTGAGGACAGATTGATTTGGCTACATGAACGCCAGTTTGTTTGGCTTTATTACAGCCCAAGAAACATATATGGTAACATTTTTCGCCACAGGTCATATGTTTGTGCTATTATTGAAGCTGATACCCCTGACTTGATGGTAAGATGTAGTGGACTTCAATTAATGTACAAGCAAGATGTGGAAGTGATTGACAAGATATTGATGGAAGCCATACAATCGTAA

Protein sequence

MLRNVHFHKYEPKQKEDKRRQDLCIQEWVEEQNSNAHPQEDSTSTSNMESSLTLQLKETIPSFLQKDLKDRFGNTFDFIIPRQNFPQLFNETSPKKYTSIQLPPNLYTNNDWMGFAVCTLFQINKHPTAILNNLGSVSRNELICHFAIENGLIEPLHVHRITEDRLIWLHERQFVWLYYSPRNIYGNIFRHRSYVCAIIEADTPDLMVRCSGLQLMYKQDVEVIDKILMEAIQS

Homology

[Close]

BLAST of HG10003514.1 vs. NCBI nr
Match: XP_038889439.1 (TMV resistance protein N-like [Benincasa hispida])

HSP 1 Score: 395.6 bits (1015), Expect = 3.0e-106
Identity = 188/233 (80.69%), Postives = 209/233 (89.70%), Query Frame = 0


Query: 1    MLRNVHFHKYEPKQKEDKRRQDLCIQEWVEEQNSNAHPQEDSTSTSNMESSLTLQLKETI 60
            MLRNV FHKY+PK KE++ RQDL IQEW EEQNSNA+PQ+DSTS+ NME S  LQLKE+I
Sbjct: 1437 MLRNVQFHKYDPKNKEEETRQDLLIQEWEEEQNSNAYPQQDSTSSPNMERSHILQLKESI 1496

Query: 61   PSFLQKDLKDRFGNTFDFIIPRQNFPQLFNETSPKKYTSIQLPPNLYTNNDWMGFAVCTL 120
            PSFLQKD KDRF NTFDF+IPR+NFPQLFN+ SPK +T I+LPPNLYT NDWMGF VCTL
Sbjct: 1497 PSFLQKDSKDRFQNTFDFVIPRRNFPQLFNQLSPKNHTGIELPPNLYTTNDWMGFLVCTL 1556

Query: 121  FQINKHPTAILNNLGSVSRNELICHFAIENGLIEPLHVHRITEDRLIWLHERQFVWLYYS 180
            FQ+NKHPTAILNNLGS++R+ELIC FAIENGLIEPLH+H ITEDR IWLHERQFVWLYYS
Sbjct: 1557 FQVNKHPTAILNNLGSITRHELICQFAIENGLIEPLHLHSITEDRFIWLHERQFVWLYYS 1616

Query: 181  PRNIYGNIFRHRSYVCAIIEADTPDLMVRCSGLQLMYKQDVEVIDKILMEAIQ 234
            PRN YG IFRHRS + AIIEADTPDLMVRC GLQL+YKQD+EVIDKILM+AIQ
Sbjct: 1617 PRNTYGEIFRHRSCIWAIIEADTPDLMVRCCGLQLVYKQDMEVIDKILMKAIQ 1669

[Close]

BLAST of HG10003514.1 vs. NCBI nr
Match: XP_022141874.1 (TMV resistance protein N-like isoform X1 [Momordica charantia])

HSP 1 Score: 364.0 bits (933), Expect = 9.7e-97
Identity = 169/234 (72.22%), Postives = 201/234 (85.90%), Query Frame = 0


Query: 1    MLRNVHFHKYEPKQKEDKRRQDLCIQEWVEEQNSNAHPQEDSTSTSNMESSLTLQLKETI 60
            MLR +HFHKY+PK+KE++RRQDLC+++W  EQN N H  +D  S  N+  +  LQLKE+I
Sbjct: 1428 MLRMIHFHKYDPKEKEEQRRQDLCLEQWEAEQNLNGHSDQD-YSAQNLGGNHILQLKESI 1487

Query: 61   PSFLQKDLKDRFGNTFDFIIPRQNFPQLFNETSPKKYTSIQLPPNLYTNNDWMGFAVCTL 120
            PSFLQKDLKDRFG TFDF+IPR++ PQLFN+ S K YT+I+LPP+LYTN++W+GFAVCTL
Sbjct: 1488 PSFLQKDLKDRFGTTFDFVIPRRHIPQLFNQQSTKNYTAIELPPSLYTNSNWIGFAVCTL 1547

Query: 121  FQINKHPTAILNNLGSVSRNELICHFAIENGLIEPLHVHRITEDRLIWLHERQFVWLYYS 180
            FQ+NKHPTAILNNL S SR+ELIC FA+ENGLIEP H+H ITED  IWLHERQFVWLYYS
Sbjct: 1548 FQVNKHPTAILNNLRSASRHELICQFAVENGLIEPFHIHTITEDTFIWLHERQFVWLYYS 1607

Query: 181  PRNIYGNIFRHRSYVCAIIEADTPDLMVRCSGLQLMYKQDVEVIDKILMEAIQS 235
            P+N YGNIFRH+S++ AIIEADTPDL VRC GLQL+Y QDVE IDK+LMEAIQS
Sbjct: 1608 PKNTYGNIFRHKSHIWAIIEADTPDLTVRCCGLQLVYNQDVEKIDKMLMEAIQS 1660

[Close]

BLAST of HG10003514.1 vs. NCBI nr
Match: XP_022141875.1 (uncharacterized protein LOC111012131 isoform X2 [Momordica charantia])

HSP 1 Score: 364.0 bits (933), Expect = 9.7e-97
Identity = 169/234 (72.22%), Postives = 201/234 (85.90%), Query Frame = 0


Query: 1    MLRNVHFHKYEPKQKEDKRRQDLCIQEWVEEQNSNAHPQEDSTSTSNMESSLTLQLKETI 60
            MLR +HFHKY+PK+KE++RRQDLC+++W  EQN N H  +D  S  N+  +  LQLKE+I
Sbjct: 1218 MLRMIHFHKYDPKEKEEQRRQDLCLEQWEAEQNLNGHSDQD-YSAQNLGGNHILQLKESI 1277

Query: 61   PSFLQKDLKDRFGNTFDFIIPRQNFPQLFNETSPKKYTSIQLPPNLYTNNDWMGFAVCTL 120
            PSFLQKDLKDRFG TFDF+IPR++ PQLFN+ S K YT+I+LPP+LYTN++W+GFAVCTL
Sbjct: 1278 PSFLQKDLKDRFGTTFDFVIPRRHIPQLFNQQSTKNYTAIELPPSLYTNSNWIGFAVCTL 1337

Query: 121  FQINKHPTAILNNLGSVSRNELICHFAIENGLIEPLHVHRITEDRLIWLHERQFVWLYYS 180
            FQ+NKHPTAILNNL S SR+ELIC FA+ENGLIEP H+H ITED  IWLHERQFVWLYYS
Sbjct: 1338 FQVNKHPTAILNNLRSASRHELICQFAVENGLIEPFHIHTITEDTFIWLHERQFVWLYYS 1397

Query: 181  PRNIYGNIFRHRSYVCAIIEADTPDLMVRCSGLQLMYKQDVEVIDKILMEAIQS 235
            P+N YGNIFRH+S++ AIIEADTPDL VRC GLQL+Y QDVE IDK+LMEAIQS
Sbjct: 1398 PKNTYGNIFRHKSHIWAIIEADTPDLTVRCCGLQLVYNQDVEKIDKMLMEAIQS 1450

[Close]

BLAST of HG10003514.1 vs. NCBI nr
Match: XP_038890618.1 (TMV resistance protein N-like [Benincasa hispida])

HSP 1 Score: 356.3 bits (913), Expect = 2.0e-94
Identity = 176/235 (74.89%), Postives = 198/235 (84.26%), Query Frame = 0


Query: 1    MLRNVHFHKYEPKQKEDKRRQDLCIQEWVEEQNSNAHPQEDSTSTSNMESSLTLQLKETI 60
            ML+NVH HKY+PK+KE++ RQD  I+EW  EQ SNAHPQE+    S ME S  LQLKE+I
Sbjct: 1436 MLKNVHSHKYDPKKKENESRQDFPIEEWEGEQKSNAHPQEE--DCSKMERSHILQLKESI 1495

Query: 61   PSFLQKDLKDRFGNTFDFIIPRQNF-PQLFNETSPKKYTSIQLPPNLYTNNDWMGFAVCT 120
            PSFLQKDLKDRF   FDF+IPR+N  PQL N+ SPK YTSIQLPPNLYTN DWMGFAV T
Sbjct: 1496 PSFLQKDLKDRFETPFDFVIPRRNVRPQLINQLSPKSYTSIQLPPNLYTNTDWMGFAVWT 1555

Query: 121  LFQINKHPTAILNNLGSVSRNELICHFAIENGLIEPLHVHRITEDRLIWLHERQFVWLYY 180
            LFQINKHPTAILNN+GSVSR+ELIC F IENGLI PLH+H I ED +IWLHERQFVWLYY
Sbjct: 1556 LFQINKHPTAILNNVGSVSRHELICQFGIENGLINPLHIHTIIEDTVIWLHERQFVWLYY 1615

Query: 181  SPRNIYGNIFRHRSYVCAIIEADTPDLMVRCSGLQLMYKQDVEVIDKILMEAIQS 235
            SPR  YG IFRHRS+V AIIEAD+PDLM +C GLQL+YKQ+V++IDKILMEAIQS
Sbjct: 1616 SPRKKYGQIFRHRSHVWAIIEADSPDLMAKCCGLQLVYKQNVQMIDKILMEAIQS 1668

[Close]

BLAST of HG10003514.1 vs. NCBI nr
Match: KAA0039319.1 (TMV resistance protein N-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 354.4 bits (908), Expect = 7.7e-94
Identity = 170/236 (72.03%), Postives = 200/236 (84.75%), Query Frame = 0


Query: 1    MLRNVHFHKYEPKQKEDKRRQDLCIQEWVEEQNSNAHPQEDSTS--TSNMESSLTLQLKE 60
            MLRN+HFHKY+PK KE++RRQDLCIQ+WVEEQNSN H  ++++S  +SNME SL LQLKE
Sbjct: 1442 MLRNIHFHKYDPKHKEEERRQDLCIQQWVEEQNSNPHHSQEASSSCSSNMEKSLILQLKE 1501

Query: 61   TIPSFLQKDLKDRFGNTFDFIIPRQNF-PQLFNETSPKKYTSIQLPPNLYTNNDWMGFAV 120
            +IPSFLQKD KDRFG+TFDF+ P++NF P L N+ SP+  T +QLPPNLYTNN W GF V
Sbjct: 1502 SIPSFLQKDSKDRFGSTFDFVFPKRNFPPTLLNQLSPENPTGVQLPPNLYTNNGWSGFLV 1561

Query: 121  CTLFQINKHPTAILNNLGSVSRNELICHFAIENGLIEPLHVHRITEDRLIWLHERQFVWL 180
            CTLFQINKHPTAIL+N+GS+SR++LIC FAIE+GLIEPLH H ITEDR IWL ERQFVWL
Sbjct: 1562 CTLFQINKHPTAILDNVGSISRHKLICQFAIESGLIEPLHTHDITEDRSIWLQERQFVWL 1621

Query: 181  YYSPRNIYGNIFRHRSYVCAIIEADTPDLMVRCSGLQLMYKQDVEVIDKILMEAIQ 234
            YY+PR+ YG I R  S + A+IEADTPDLMVRC G+ L+YKQDV VIDKILM AIQ
Sbjct: 1622 YYTPRHTYGKIIRQWSSIWAVIEADTPDLMVRCCGMSLVYKQDVAVIDKILMRAIQ 1677

[Close]

BLAST of HG10003514.1 vs. ExPASy TrEMBL
Match: A0A6J1CK08 (TMV resistance protein N-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012131 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.7e-97
Identity = 169/234 (72.22%), Postives = 201/234 (85.90%), Query Frame = 0


Query: 1    MLRNVHFHKYEPKQKEDKRRQDLCIQEWVEEQNSNAHPQEDSTSTSNMESSLTLQLKETI 60
            MLR +HFHKY+PK+KE++RRQDLC+++W  EQN N H  +D  S  N+  +  LQLKE+I
Sbjct: 1428 MLRMIHFHKYDPKEKEEQRRQDLCLEQWEAEQNLNGHSDQD-YSAQNLGGNHILQLKESI 1487

Query: 61   PSFLQKDLKDRFGNTFDFIIPRQNFPQLFNETSPKKYTSIQLPPNLYTNNDWMGFAVCTL 120
            PSFLQKDLKDRFG TFDF+IPR++ PQLFN+ S K YT+I+LPP+LYTN++W+GFAVCTL
Sbjct: 1488 PSFLQKDLKDRFGTTFDFVIPRRHIPQLFNQQSTKNYTAIELPPSLYTNSNWIGFAVCTL 1547

Query: 121  FQINKHPTAILNNLGSVSRNELICHFAIENGLIEPLHVHRITEDRLIWLHERQFVWLYYS 180
            FQ+NKHPTAILNNL S SR+ELIC FA+ENGLIEP H+H ITED  IWLHERQFVWLYYS
Sbjct: 1548 FQVNKHPTAILNNLRSASRHELICQFAVENGLIEPFHIHTITEDTFIWLHERQFVWLYYS 1607

Query: 181  PRNIYGNIFRHRSYVCAIIEADTPDLMVRCSGLQLMYKQDVEVIDKILMEAIQS 235
            P+N YGNIFRH+S++ AIIEADTPDL VRC GLQL+Y QDVE IDK+LMEAIQS
Sbjct: 1608 PKNTYGNIFRHKSHIWAIIEADTPDLTVRCCGLQLVYNQDVEKIDKMLMEAIQS 1660

[Close]

BLAST of HG10003514.1 vs. ExPASy TrEMBL
Match: A0A6J1CJB7 (uncharacterized protein LOC111012131 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012131 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.7e-97
Identity = 169/234 (72.22%), Postives = 201/234 (85.90%), Query Frame = 0


Query: 1    MLRNVHFHKYEPKQKEDKRRQDLCIQEWVEEQNSNAHPQEDSTSTSNMESSLTLQLKETI 60
            MLR +HFHKY+PK+KE++RRQDLC+++W  EQN N H  +D  S  N+  +  LQLKE+I
Sbjct: 1218 MLRMIHFHKYDPKEKEEQRRQDLCLEQWEAEQNLNGHSDQD-YSAQNLGGNHILQLKESI 1277

Query: 61   PSFLQKDLKDRFGNTFDFIIPRQNFPQLFNETSPKKYTSIQLPPNLYTNNDWMGFAVCTL 120
            PSFLQKDLKDRFG TFDF+IPR++ PQLFN+ S K YT+I+LPP+LYTN++W+GFAVCTL
Sbjct: 1278 PSFLQKDLKDRFGTTFDFVIPRRHIPQLFNQQSTKNYTAIELPPSLYTNSNWIGFAVCTL 1337

Query: 121  FQINKHPTAILNNLGSVSRNELICHFAIENGLIEPLHVHRITEDRLIWLHERQFVWLYYS 180
            FQ+NKHPTAILNNL S SR+ELIC FA+ENGLIEP H+H ITED  IWLHERQFVWLYYS
Sbjct: 1338 FQVNKHPTAILNNLRSASRHELICQFAVENGLIEPFHIHTITEDTFIWLHERQFVWLYYS 1397

Query: 181  PRNIYGNIFRHRSYVCAIIEADTPDLMVRCSGLQLMYKQDVEVIDKILMEAIQS 235
            P+N YGNIFRH+S++ AIIEADTPDL VRC GLQL+Y QDVE IDK+LMEAIQS
Sbjct: 1398 PKNTYGNIFRHKSHIWAIIEADTPDLTVRCCGLQLVYNQDVEKIDKMLMEAIQS 1450

[Close]

BLAST of HG10003514.1 vs. ExPASy TrEMBL
Match: A0A5D3BP39 (TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001120 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.7e-94
Identity = 170/236 (72.03%), Postives = 200/236 (84.75%), Query Frame = 0


Query: 1    MLRNVHFHKYEPKQKEDKRRQDLCIQEWVEEQNSNAHPQEDSTS--TSNMESSLTLQLKE 60
            MLRN+HFHKY+PK KE++RRQDLCIQ+WVEEQNSN H  ++++S  +SNME SL LQLKE
Sbjct: 1388 MLRNIHFHKYDPKHKEEERRQDLCIQQWVEEQNSNPHHSQEASSSCSSNMEKSLILQLKE 1447

Query: 61   TIPSFLQKDLKDRFGNTFDFIIPRQNF-PQLFNETSPKKYTSIQLPPNLYTNNDWMGFAV 120
            +IPSFLQKD KDRFG+TFDF+ P++NF P L N+ SP+  T +QLPPNLYTNN W GF V
Sbjct: 1448 SIPSFLQKDSKDRFGSTFDFVFPKRNFPPTLLNQLSPENPTGVQLPPNLYTNNGWSGFLV 1507

Query: 121  CTLFQINKHPTAILNNLGSVSRNELICHFAIENGLIEPLHVHRITEDRLIWLHERQFVWL 180
            CTLFQINKHPTAIL+N+GS+SR++LIC FAIE+GLIEPLH H ITEDR IWL ERQFVWL
Sbjct: 1508 CTLFQINKHPTAILDNVGSISRHKLICQFAIESGLIEPLHTHDITEDRSIWLQERQFVWL 1567

Query: 181  YYSPRNIYGNIFRHRSYVCAIIEADTPDLMVRCSGLQLMYKQDVEVIDKILMEAIQ 234
            YY+PR+ YG I R  S + A+IEADTPDLMVRC G+ L+YKQDV VIDKILM AIQ
Sbjct: 1568 YYTPRHTYGKIIRQWSSIWAVIEADTPDLMVRCCGMSLVYKQDVAVIDKILMRAIQ 1623

[Close]

BLAST of HG10003514.1 vs. ExPASy TrEMBL
Match: A0A5A7TDH4 (TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001160 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.7e-94
Identity = 170/236 (72.03%), Postives = 200/236 (84.75%), Query Frame = 0


Query: 1    MLRNVHFHKYEPKQKEDKRRQDLCIQEWVEEQNSNAHPQEDSTS--TSNMESSLTLQLKE 60
            MLRN+HFHKY+PK KE++RRQDLCIQ+WVEEQNSN H  ++++S  +SNME SL LQLKE
Sbjct: 1442 MLRNIHFHKYDPKHKEEERRQDLCIQQWVEEQNSNPHHSQEASSSCSSNMEKSLILQLKE 1501

Query: 61   TIPSFLQKDLKDRFGNTFDFIIPRQNF-PQLFNETSPKKYTSIQLPPNLYTNNDWMGFAV 120
            +IPSFLQKD KDRFG+TFDF+ P++NF P L N+ SP+  T +QLPPNLYTNN W GF V
Sbjct: 1502 SIPSFLQKDSKDRFGSTFDFVFPKRNFPPTLLNQLSPENPTGVQLPPNLYTNNGWSGFLV 1561

Query: 121  CTLFQINKHPTAILNNLGSVSRNELICHFAIENGLIEPLHVHRITEDRLIWLHERQFVWL 180
            CTLFQINKHPTAIL+N+GS+SR++LIC FAIE+GLIEPLH H ITEDR IWL ERQFVWL
Sbjct: 1562 CTLFQINKHPTAILDNVGSISRHKLICQFAIESGLIEPLHTHDITEDRSIWLQERQFVWL 1621

Query: 181  YYSPRNIYGNIFRHRSYVCAIIEADTPDLMVRCSGLQLMYKQDVEVIDKILMEAIQ 234
            YY+PR+ YG I R  S + A+IEADTPDLMVRC G+ L+YKQDV VIDKILM AIQ
Sbjct: 1622 YYTPRHTYGKIIRQWSSIWAVIEADTPDLMVRCCGMSLVYKQDVAVIDKILMRAIQ 1677

[Close]

BLAST of HG10003514.1 vs. ExPASy TrEMBL
Match: A0A1S3CAY0 (uncharacterized protein LOC103498653 OS=Cucumis melo OX=3656 GN=LOC103498653 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.1e-93
Identity = 169/236 (71.61%), Postives = 199/236 (84.32%), Query Frame = 0


Query: 1   MLRNVHFHKYEPKQKEDKRRQDLCIQEWVEEQNSNAHPQEDSTS--TSNMESSLTLQLKE 60
           MLRN+HFHKY+PK KE++RRQDLCIQ+W EEQNSN H  ++++S  +SNME SL LQLKE
Sbjct: 472 MLRNIHFHKYDPKHKEEERRQDLCIQQWAEEQNSNPHHSQEASSSCSSNMEKSLILQLKE 531

Query: 61  TIPSFLQKDLKDRFGNTFDFIIPRQNF-PQLFNETSPKKYTSIQLPPNLYTNNDWMGFAV 120
           +IPSFLQKD KDRFG+TFDF+ P++NF P L N+ SP+  T +QLPPNLYTNN W GF V
Sbjct: 532 SIPSFLQKDSKDRFGSTFDFVFPKRNFPPALLNQLSPENPTGVQLPPNLYTNNGWSGFLV 591

Query: 121 CTLFQINKHPTAILNNLGSVSRNELICHFAIENGLIEPLHVHRITEDRLIWLHERQFVWL 180
           CTLFQINKHPTAIL+N+GS+SR++LIC FAIE+GLIEPLH H ITEDR IWL ERQFVWL
Sbjct: 592 CTLFQINKHPTAILDNVGSISRHKLICQFAIESGLIEPLHTHDITEDRSIWLQERQFVWL 651

Query: 181 YYSPRNIYGNIFRHRSYVCAIIEADTPDLMVRCSGLQLMYKQDVEVIDKILMEAIQ 234
           YY+PR+ YG I R  S + A+IEADTPDLMVRC G+ L+YKQDV VIDKILM AIQ
Sbjct: 652 YYTPRHTYGKIIRQWSSIWAVIEADTPDLMVRCCGMSLVYKQDVAVIDKILMRAIQ 707

The following BLAST results are available for this feature:

BLAST of HG10003514.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889439.1	3.0e-106	80.69	TMV resistance protein N-like [Benincasa hispida]	[more]
XP_022141874.1	9.7e-97	72.22	TMV resistance protein N-like isoform X1 [Momordica charantia]	[more]
XP_022141875.1	9.7e-97	72.22	uncharacterized protein LOC111012131 isoform X2 [Momordica charantia]	[more]
XP_038890618.1	2.0e-94	74.89	TMV resistance protein N-like [Benincasa hispida]	[more]
KAA0039319.1	7.7e-94	72.03	TMV resistance protein N-like isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of HG10003514.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10003514.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CK08	4.7e-97	72.22	TMV resistance protein N-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1CJB7	4.7e-97	72.22	uncharacterized protein LOC111012131 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A5D3BP39	3.7e-94	72.03	TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7TDH4	3.7e-94	72.03	TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CAY0	1.1e-93	71.61	uncharacterized protein LOC103498653 OS=Cucumis melo OX=3656 GN=LOC103498653 PE=...	[more]

BLAST of HG10003514.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..51

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10003514	HG10003514	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10003514.1-cds	HG10003514.1-cds-Chr08:2613759..2613965	CDS
HG10003514.1-cds	HG10003514.1-cds-Chr08:2614629..2615126	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10003514.1	HG10003514.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0007165	signal transduction
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0003953	NAD+ nucleosidase activity