HG10001442.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001442.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	TOX high mobility group box family member 4-A, putative isoform 4
Location	Chr09: 17193650 .. 17194513 (-)
Sequence length	864
RNA-Seq Expression	HG10001442.1
Synteny	HG10001442.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCAAGTGAAGAAAGTATAAAGAACAAAGAGAAAGTGAAGAGCTTACTTCTTCTCCTGCAGGCAGCATATGAAGAAAGAGATGAAGCAAGAGATCAGCTGCAGAAACTGATGAACAAGTTTATGCCAACTACTGCAACTGAATTACCAGCTCTGCTTCATTTCCAACCTGAAAGCCCTCTCAACATACCCACCAAAGCAAATTCAAGCATCACAGAATCAAACAGTCTCTATGAAACTTATAATCACCATTCATATGGTTCTTCACCAGCAGATTCGTTCTTTGATGGAGTTTCATCACCAGATTTCTCCACTGCAAACATGGCTGATTCAAGCAGAATAAGTTTCGTAAATCAGCCCTTTGTCACAGAGTATAATCCCCCTCAGCCTCCTCTGGCCATAGGTCTAGACACTCCCAAAACAGAAAAGGCTGATCCATTTTCTGCAGTGATTGATAATCTTGTTAAGGGAAGAGCATTGCCTCAGAAAGGAAAGCTCCTGCAAGCTGTTACAGAAGCCGGTCCTTTACTTCAGACGCTTCTCGTTGCTGGGCCACTTCCGCAATGGCGTAATCCTCCTCCATTGCAAGCCTTCAAGATTCCTCCTCTTCTAGTGAATGGCTGCAACACTAAAAATATCAATCAAAACCCCACTTCAAAACCGAGCAGCGCTTCCCCAAAGCCACTGCGTTCTCTTTTACATGCTGAAATGGCCCGTGGATCTTCTCAAATTTGTTCAGCTTCCTCCATGTTGAGTTTCACAAATGGCCCTTCTGGTTCTTGCTTCAACAGTGCCTTGCTGATGGCTCAAAATGTTAACCACCCTCAGATTCTAGCAGTCAAGAGACAGAAAATTCAATGA

mRNA sequence

ATGGAAGCAAGTGAAGAAAGTATAAAGAACAAAGAGAAAGTGAAGAGCTTACTTCTTCTCCTGCAGGCAGCATATGAAGAAAGAGATGAAGCAAGAGATCAGCTGCAGAAACTGATGAACAAGTTTATGCCAACTACTGCAACTGAATTACCAGCTCTGCTTCATTTCCAACCTGAAAGCCCTCTCAACATACCCACCAAAGCAAATTCAAGCATCACAGAATCAAACAGTCTCTATGAAACTTATAATCACCATTCATATGGTTCTTCACCAGCAGATTCGTTCTTTGATGGAGTTTCATCACCAGATTTCTCCACTGCAAACATGGCTGATTCAAGCAGAATAAGTTTCGTAAATCAGCCCTTTGTCACAGAGTATAATCCCCCTCAGCCTCCTCTGGCCATAGGTCTAGACACTCCCAAAACAGAAAAGGCTGATCCATTTTCTGCAGTGATTGATAATCTTGTTAAGGGAAGAGCATTGCCTCAGAAAGGAAAGCTCCTGCAAGCTGTTACAGAAGCCGGTCCTTTACTTCAGACGCTTCTCGTTGCTGGGCCACTTCCGCAATGGCGTAATCCTCCTCCATTGCAAGCCTTCAAGATTCCTCCTCTTCTAGTGAATGGCTGCAACACTAAAAATATCAATCAAAACCCCACTTCAAAACCGAGCAGCGCTTCCCCAAAGCCACTGCGTTCTCTTTTACATGCTGAAATGGCCCGTGGATCTTCTCAAATTTGTTCAGCTTCCTCCATGTTGAGTTTCACAAATGGCCCTTCTGGTTCTTGCTTCAACAGTGCCTTGCTGATGGCTCAAAATGTTAACCACCCTCAGATTCTAGCAGTCAAGAGACAGAAAATTCAATGA

Coding sequence (CDS)

ATGGAAGCAAGTGAAGAAAGTATAAAGAACAAAGAGAAAGTGAAGAGCTTACTTCTTCTCCTGCAGGCAGCATATGAAGAAAGAGATGAAGCAAGAGATCAGCTGCAGAAACTGATGAACAAGTTTATGCCAACTACTGCAACTGAATTACCAGCTCTGCTTCATTTCCAACCTGAAAGCCCTCTCAACATACCCACCAAAGCAAATTCAAGCATCACAGAATCAAACAGTCTCTATGAAACTTATAATCACCATTCATATGGTTCTTCACCAGCAGATTCGTTCTTTGATGGAGTTTCATCACCAGATTTCTCCACTGCAAACATGGCTGATTCAAGCAGAATAAGTTTCGTAAATCAGCCCTTTGTCACAGAGTATAATCCCCCTCAGCCTCCTCTGGCCATAGGTCTAGACACTCCCAAAACAGAAAAGGCTGATCCATTTTCTGCAGTGATTGATAATCTTGTTAAGGGAAGAGCATTGCCTCAGAAAGGAAAGCTCCTGCAAGCTGTTACAGAAGCCGGTCCTTTACTTCAGACGCTTCTCGTTGCTGGGCCACTTCCGCAATGGCGTAATCCTCCTCCATTGCAAGCCTTCAAGATTCCTCCTCTTCTAGTGAATGGCTGCAACACTAAAAATATCAATCAAAACCCCACTTCAAAACCGAGCAGCGCTTCCCCAAAGCCACTGCGTTCTCTTTTACATGCTGAAATGGCCCGTGGATCTTCTCAAATTTGTTCAGCTTCCTCCATGTTGAGTTTCACAAATGGCCCTTCTGGTTCTTGCTTCAACAGTGCCTTGCTGATGGCTCAAAATGTTAACCACCCTCAGATTCTAGCAGTCAAGAGACAGAAAATTCAATGA

Protein sequence

MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKFMPTTATELPALLHFQPESPLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSRISFVNQPFVTEYNPPQPPLAIGLDTPKTEKADPFSAVIDNLVKGRALPQKGKLLQAVTEAGPLLQTLLVAGPLPQWRNPPPLQAFKIPPLLVNGCNTKNINQNPTSKPSSASPKPLRSLLHAEMARGSSQICSASSMLSFTNGPSGSCFNSALLMAQNVNHPQILAVKRQKIQ

Homology

[Close]

BLAST of HG10001442.1 vs. NCBI nr
Match: XP_008448366.1 (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 509.6 bits (1311), Expect = 1.8e-140
Identity = 268/289 (92.73%), Postives = 274/289 (94.81%), Query Frame = 0


Query: 1   MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKFMPTTATELPALLHFQPES 60
           MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNK MPTTATELPALLHFQPES
Sbjct: 33  MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKIMPTTATELPALLHFQPES 92

Query: 61  PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSRISFVNQ 120
           PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSS+ISFVNQ
Sbjct: 93  PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSKISFVNQ 152

Query: 121 PFVTEY-NPPQPPLAIGLDTPKTEKADPFSAVIDNLVKGRALPQKGKLLQAVTEAGPLLQ 180
           PFV+EY N PQPPLA GLDTPKTEK DPFSAVIDNL KGRALPQKGKLLQAVTEAGPLLQ
Sbjct: 153 PFVSEYNNAPQPPLATGLDTPKTEKTDPFSAVIDNLAKGRALPQKGKLLQAVTEAGPLLQ 212

Query: 181 TLLVAGPLPQWRNPPPLQAFKIPPLLVNGCNTKNINQNPTSKPSSASPKPLRSLLHAEM- 240
           TLLVAGPLPQWRNPPPLQ FKIPPLLVNGCNTKNINQNP+SK SS+SPKPL SLLHAEM 
Sbjct: 213 TLLVAGPLPQWRNPPPLQTFKIPPLLVNGCNTKNINQNPSSKASSSSPKPLHSLLHAEMS 272

Query: 241 ARGSSQICSASSMLSFTNGPSGSCFNSALLMAQNVNHPQILAVKRQKIQ 288
           +RGSSQICSASS LSFTNGPSGSC NSAL+MA NVNH QILA KRQKIQ
Sbjct: 273 SRGSSQICSASSTLSFTNGPSGSCINSALMMAPNVNHTQILAAKRQKIQ 321

[Close]

BLAST of HG10001442.1 vs. NCBI nr
Match: KAA0061953.1 (TPRXL protein [Cucumis melo var. makuwa] >TYK23977.1 TPRXL protein [Cucumis melo var. makuwa])

HSP 1 Score: 509.6 bits (1311), Expect = 1.8e-140
Identity = 268/289 (92.73%), Postives = 274/289 (94.81%), Query Frame = 0


Query: 1   MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKFMPTTATELPALLHFQPES 60
           MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNK MPTTATELPALLHFQPES
Sbjct: 31  MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKIMPTTATELPALLHFQPES 90

Query: 61  PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSRISFVNQ 120
           PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSS+ISFVNQ
Sbjct: 91  PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSKISFVNQ 150

Query: 121 PFVTEY-NPPQPPLAIGLDTPKTEKADPFSAVIDNLVKGRALPQKGKLLQAVTEAGPLLQ 180
           PFV+EY N PQPPLA GLDTPKTEK DPFSAVIDNL KGRALPQKGKLLQAVTEAGPLLQ
Sbjct: 151 PFVSEYNNAPQPPLATGLDTPKTEKTDPFSAVIDNLAKGRALPQKGKLLQAVTEAGPLLQ 210

Query: 181 TLLVAGPLPQWRNPPPLQAFKIPPLLVNGCNTKNINQNPTSKPSSASPKPLRSLLHAEM- 240
           TLLVAGPLPQWRNPPPLQ FKIPPLLVNGCNTKNINQNP+SK SS+SPKPL SLLHAEM 
Sbjct: 211 TLLVAGPLPQWRNPPPLQTFKIPPLLVNGCNTKNINQNPSSKASSSSPKPLHSLLHAEMS 270

Query: 241 ARGSSQICSASSMLSFTNGPSGSCFNSALLMAQNVNHPQILAVKRQKIQ 288
           +RGSSQICSASS LSFTNGPSGSC NSAL+MA NVNH QILA KRQKIQ
Sbjct: 271 SRGSSQICSASSTLSFTNGPSGSCINSALMMAPNVNHTQILAAKRQKIQ 319

[Close]

BLAST of HG10001442.1 vs. NCBI nr
Match: XP_011657251.1 (uncharacterized protein LOC101217302 [Cucumis sativus] >KGN47356.1 hypothetical protein Csa_022991 [Cucumis sativus])

HSP 1 Score: 507.3 bits (1305), Expect = 8.7e-140
Identity = 266/289 (92.04%), Postives = 274/289 (94.81%), Query Frame = 0


Query: 1   MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKFMPTTATELPALLHFQPES 60
           MEA+EES+KNKEKVKSLLLLLQAAYEERDEARDQLQKLMNK MPTTATELPAL HFQPES
Sbjct: 33  MEANEESVKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKIMPTTATELPALRHFQPES 92

Query: 61  PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSRISFVNQ 120
           PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSS+ISFVNQ
Sbjct: 93  PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSKISFVNQ 152

Query: 121 PFVTEY-NPPQPPLAIGLDTPKTEKADPFSAVIDNLVKGRALPQKGKLLQAVTEAGPLLQ 180
           PFV EY N PQPPLA GLDTPKTEK DPFSAVIDNL KGRALPQKGKLLQAVTEAGPLLQ
Sbjct: 153 PFVPEYNNAPQPPLATGLDTPKTEKPDPFSAVIDNLAKGRALPQKGKLLQAVTEAGPLLQ 212

Query: 181 TLLVAGPLPQWRNPPPLQAFKIPPLLVNGCNTKNINQNPTSKPSSASPKPLRSLLHAEM- 240
           TLLVAGPLPQWRNPPPLQAFKIPPLLVNGCNTKNI+QNP+SK SS+S KPL SLLHAEM 
Sbjct: 213 TLLVAGPLPQWRNPPPLQAFKIPPLLVNGCNTKNIDQNPSSKASSSSQKPLHSLLHAEML 272

Query: 241 ARGSSQICSASSMLSFTNGPSGSCFNSALLMAQNVNHPQILAVKRQKIQ 288
           +RGSSQICSASSMLSFTNGPSGSCFNSAL+MA NVNHPQIL  KRQKIQ
Sbjct: 273 SRGSSQICSASSMLSFTNGPSGSCFNSALMMAPNVNHPQILGAKRQKIQ 321

[Close]

BLAST of HG10001442.1 vs. NCBI nr
Match: KAG6605486.1 (hypothetical protein SDJN03_02803, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 479.6 bits (1233), Expect = 1.9e-131
Identity = 258/288 (89.58%), Postives = 267/288 (92.71%), Query Frame = 0


Query: 1   MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKFMP-TTATELPALLHFQPE 60
           MEA+EESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLM+KF+P TTATELPALL FQ E
Sbjct: 33  MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMSKFVPTTTATELPALLLFQAE 92

Query: 61  SPLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSRISFVN 120
           SPLNIPTKANSSITESNSLYETYNH SYGSSPADSFFDGVSSPDFSTANMADS ++SFVN
Sbjct: 93  SPLNIPTKANSSITESNSLYETYNHQSYGSSPADSFFDGVSSPDFSTANMADSCKMSFVN 152

Query: 121 QPFVTEYNPPQPPLAIGLDTPKTEKADPFSAVIDNLVKGRALPQKGKLLQAVTEAGPLLQ 180
           QP+VTEYN PQ PLA G+DTPKTEK DPFSAVIDNLVKG+ALPQKGKLLQAVTEAGPLLQ
Sbjct: 153 QPYVTEYNAPQ-PLATGVDTPKTEKLDPFSAVIDNLVKGKALPQKGKLLQAVTEAGPLLQ 212

Query: 181 TLLVAGPLPQWRNPPPLQAFKIPPLLVNGCNTKNINQNPTSKPSSASPKPLRSLLHAEMA 240
           TLLVAGPLPQWRNPPPLQAFKIP LLVNGCNTKNINQN  SKPSS SPKPL SLLH EM+
Sbjct: 213 TLLVAGPLPQWRNPPPLQAFKIPSLLVNGCNTKNINQNLPSKPSSPSPKPLHSLLHTEMS 272

Query: 241 RGSSQICSASSMLSFTNGPSGSCFNSALLMAQNVNHPQILAVKRQKIQ 288
           RGSSQICSASSM SF NGPSGSCFNSALLMA NVN  QILA KRQKIQ
Sbjct: 273 RGSSQICSASSMFSFNNGPSGSCFNSALLMAPNVN-TQILAAKRQKIQ 318

[Close]

BLAST of HG10001442.1 vs. NCBI nr
Match: XP_022948173.1 (uncharacterized protein LOC111451829 [Cucurbita moschata] >KAG7035428.1 hypothetical protein SDJN02_02224, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 479.6 bits (1233), Expect = 1.9e-131
Identity = 258/288 (89.58%), Postives = 267/288 (92.71%), Query Frame = 0


Query: 1   MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKFMP-TTATELPALLHFQPE 60
           MEA+EESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLM+KF+P TTATELPALL FQ E
Sbjct: 61  MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMSKFVPTTTATELPALLLFQAE 120

Query: 61  SPLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSRISFVN 120
           SPLNIPTKANSSITESNSLYETYNH SYGSSPADSFFDGVSSPDFSTANMADS ++SFVN
Sbjct: 121 SPLNIPTKANSSITESNSLYETYNHQSYGSSPADSFFDGVSSPDFSTANMADSCKMSFVN 180

Query: 121 QPFVTEYNPPQPPLAIGLDTPKTEKADPFSAVIDNLVKGRALPQKGKLLQAVTEAGPLLQ 180
           QP+VTEYN PQ PLA G+DTPKTEK DPFSAVIDNLVKG+ALPQKGKLLQAVTEAGPLLQ
Sbjct: 181 QPYVTEYNAPQ-PLATGVDTPKTEKLDPFSAVIDNLVKGKALPQKGKLLQAVTEAGPLLQ 240

Query: 181 TLLVAGPLPQWRNPPPLQAFKIPPLLVNGCNTKNINQNPTSKPSSASPKPLRSLLHAEMA 240
           TLLVAGPLPQWRNPPPLQAFKIP LLVNGCNTKNINQN  SKPSS SPKPL SLLH EM+
Sbjct: 241 TLLVAGPLPQWRNPPPLQAFKIPSLLVNGCNTKNINQNLPSKPSSPSPKPLHSLLHTEMS 300

Query: 241 RGSSQICSASSMLSFTNGPSGSCFNSALLMAQNVNHPQILAVKRQKIQ 288
           RGSSQICSASSM SF NGPSGSCFNSALLMA NVN  QILA KRQKIQ
Sbjct: 301 RGSSQICSASSMFSFNNGPSGSCFNSALLMAPNVN-TQILAAKRQKIQ 346

[Close]

BLAST of HG10001442.1 vs. ExPASy TrEMBL
Match: A0A5A7V1C9 (TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00400 PE=4 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 8.5e-141
Identity = 268/289 (92.73%), Postives = 274/289 (94.81%), Query Frame = 0


Query: 1   MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKFMPTTATELPALLHFQPES 60
           MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNK MPTTATELPALLHFQPES
Sbjct: 31  MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKIMPTTATELPALLHFQPES 90

Query: 61  PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSRISFVNQ 120
           PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSS+ISFVNQ
Sbjct: 91  PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSKISFVNQ 150

Query: 121 PFVTEY-NPPQPPLAIGLDTPKTEKADPFSAVIDNLVKGRALPQKGKLLQAVTEAGPLLQ 180
           PFV+EY N PQPPLA GLDTPKTEK DPFSAVIDNL KGRALPQKGKLLQAVTEAGPLLQ
Sbjct: 151 PFVSEYNNAPQPPLATGLDTPKTEKTDPFSAVIDNLAKGRALPQKGKLLQAVTEAGPLLQ 210

Query: 181 TLLVAGPLPQWRNPPPLQAFKIPPLLVNGCNTKNINQNPTSKPSSASPKPLRSLLHAEM- 240
           TLLVAGPLPQWRNPPPLQ FKIPPLLVNGCNTKNINQNP+SK SS+SPKPL SLLHAEM 
Sbjct: 211 TLLVAGPLPQWRNPPPLQTFKIPPLLVNGCNTKNINQNPSSKASSSSPKPLHSLLHAEMS 270

Query: 241 ARGSSQICSASSMLSFTNGPSGSCFNSALLMAQNVNHPQILAVKRQKIQ 288
           +RGSSQICSASS LSFTNGPSGSC NSAL+MA NVNH QILA KRQKIQ
Sbjct: 271 SRGSSQICSASSTLSFTNGPSGSCINSALMMAPNVNHTQILAAKRQKIQ 319

[Close]

BLAST of HG10001442.1 vs. ExPASy TrEMBL
Match: A0A1S3BKE0 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103490578 PE=4 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 8.5e-141
Identity = 268/289 (92.73%), Postives = 274/289 (94.81%), Query Frame = 0


Query: 1   MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKFMPTTATELPALLHFQPES 60
           MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNK MPTTATELPALLHFQPES
Sbjct: 33  MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKIMPTTATELPALLHFQPES 92

Query: 61  PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSRISFVNQ 120
           PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSS+ISFVNQ
Sbjct: 93  PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSKISFVNQ 152

Query: 121 PFVTEY-NPPQPPLAIGLDTPKTEKADPFSAVIDNLVKGRALPQKGKLLQAVTEAGPLLQ 180
           PFV+EY N PQPPLA GLDTPKTEK DPFSAVIDNL KGRALPQKGKLLQAVTEAGPLLQ
Sbjct: 153 PFVSEYNNAPQPPLATGLDTPKTEKTDPFSAVIDNLAKGRALPQKGKLLQAVTEAGPLLQ 212

Query: 181 TLLVAGPLPQWRNPPPLQAFKIPPLLVNGCNTKNINQNPTSKPSSASPKPLRSLLHAEM- 240
           TLLVAGPLPQWRNPPPLQ FKIPPLLVNGCNTKNINQNP+SK SS+SPKPL SLLHAEM 
Sbjct: 213 TLLVAGPLPQWRNPPPLQTFKIPPLLVNGCNTKNINQNPSSKASSSSPKPLHSLLHAEMS 272

Query: 241 ARGSSQICSASSMLSFTNGPSGSCFNSALLMAQNVNHPQILAVKRQKIQ 288
           +RGSSQICSASS LSFTNGPSGSC NSAL+MA NVNH QILA KRQKIQ
Sbjct: 273 SRGSSQICSASSTLSFTNGPSGSCINSALMMAPNVNHTQILAAKRQKIQ 321

[Close]

BLAST of HG10001442.1 vs. ExPASy TrEMBL
Match: A0A0A0KHV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G303220 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 4.2e-140
Identity = 266/289 (92.04%), Postives = 274/289 (94.81%), Query Frame = 0


Query: 1   MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKFMPTTATELPALLHFQPES 60
           MEA+EES+KNKEKVKSLLLLLQAAYEERDEARDQLQKLMNK MPTTATELPAL HFQPES
Sbjct: 33  MEANEESVKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKIMPTTATELPALRHFQPES 92

Query: 61  PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSRISFVNQ 120
           PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSS+ISFVNQ
Sbjct: 93  PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSKISFVNQ 152

Query: 121 PFVTEY-NPPQPPLAIGLDTPKTEKADPFSAVIDNLVKGRALPQKGKLLQAVTEAGPLLQ 180
           PFV EY N PQPPLA GLDTPKTEK DPFSAVIDNL KGRALPQKGKLLQAVTEAGPLLQ
Sbjct: 153 PFVPEYNNAPQPPLATGLDTPKTEKPDPFSAVIDNLAKGRALPQKGKLLQAVTEAGPLLQ 212

Query: 181 TLLVAGPLPQWRNPPPLQAFKIPPLLVNGCNTKNINQNPTSKPSSASPKPLRSLLHAEM- 240
           TLLVAGPLPQWRNPPPLQAFKIPPLLVNGCNTKNI+QNP+SK SS+S KPL SLLHAEM 
Sbjct: 213 TLLVAGPLPQWRNPPPLQAFKIPPLLVNGCNTKNIDQNPSSKASSSSQKPLHSLLHAEML 272

Query: 241 ARGSSQICSASSMLSFTNGPSGSCFNSALLMAQNVNHPQILAVKRQKIQ 288
           +RGSSQICSASSMLSFTNGPSGSCFNSAL+MA NVNHPQIL  KRQKIQ
Sbjct: 273 SRGSSQICSASSMLSFTNGPSGSCFNSALMMAPNVNHPQILGAKRQKIQ 321

[Close]

BLAST of HG10001442.1 vs. ExPASy TrEMBL
Match: A0A6J1G8N0 (uncharacterized protein LOC111451829 OS=Cucurbita moschata OX=3662 GN=LOC111451829 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 9.4e-132
Identity = 258/288 (89.58%), Postives = 267/288 (92.71%), Query Frame = 0


Query: 1   MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKFMP-TTATELPALLHFQPE 60
           MEA+EESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLM+KF+P TTATELPALL FQ E
Sbjct: 61  MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMSKFVPTTTATELPALLLFQAE 120

Query: 61  SPLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSRISFVN 120
           SPLNIPTKANSSITESNSLYETYNH SYGSSPADSFFDGVSSPDFSTANMADS ++SFVN
Sbjct: 121 SPLNIPTKANSSITESNSLYETYNHQSYGSSPADSFFDGVSSPDFSTANMADSCKMSFVN 180

Query: 121 QPFVTEYNPPQPPLAIGLDTPKTEKADPFSAVIDNLVKGRALPQKGKLLQAVTEAGPLLQ 180
           QP+VTEYN PQ PLA G+DTPKTEK DPFSAVIDNLVKG+ALPQKGKLLQAVTEAGPLLQ
Sbjct: 181 QPYVTEYNAPQ-PLATGVDTPKTEKLDPFSAVIDNLVKGKALPQKGKLLQAVTEAGPLLQ 240

Query: 181 TLLVAGPLPQWRNPPPLQAFKIPPLLVNGCNTKNINQNPTSKPSSASPKPLRSLLHAEMA 240
           TLLVAGPLPQWRNPPPLQAFKIP LLVNGCNTKNINQN  SKPSS SPKPL SLLH EM+
Sbjct: 241 TLLVAGPLPQWRNPPPLQAFKIPSLLVNGCNTKNINQNLPSKPSSPSPKPLHSLLHTEMS 300

Query: 241 RGSSQICSASSMLSFTNGPSGSCFNSALLMAQNVNHPQILAVKRQKIQ 288
           RGSSQICSASSM SF NGPSGSCFNSALLMA NVN  QILA KRQKIQ
Sbjct: 301 RGSSQICSASSMFSFNNGPSGSCFNSALLMAPNVN-TQILAAKRQKIQ 346

[Close]

BLAST of HG10001442.1 vs. ExPASy TrEMBL
Match: A0A6J1L7E2 (uncharacterized protein LOC111499860 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499860 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 3.2e-124
Identity = 250/288 (86.81%), Postives = 258/288 (89.58%), Query Frame = 0


Query: 1   MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKFMP-TTATELPALLHFQPE 60
           MEA+EESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLM+KF+P TTATELPALL FQPE
Sbjct: 12  MEANEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMSKFVPSTTATELPALLLFQPE 71

Query: 61  SPLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSRISFVN 120
           SPLNIPTKANSSITESNSLYETYNH SYGSSPADSFFDGVSSPDFSTANMADS ++SFVN
Sbjct: 72  SPLNIPTKANSSITESNSLYETYNHQSYGSSPADSFFDGVSSPDFSTANMADSCKMSFVN 131

Query: 121 QPFVTEYNPPQPPLAIGLDTPKTEKADPFSAVIDNLVKGRALPQKGKLLQAVTEAGPLLQ 180
           QP+VTEYN PQ PLA G+DTPKTEK DPFSAVIDNLVKG+ALPQKGKLLQAVTEAGPLLQ
Sbjct: 132 QPYVTEYNAPQ-PLATGVDTPKTEKPDPFSAVIDNLVKGKALPQKGKLLQAVTEAGPLLQ 191

Query: 181 TLLVAGPLPQWRNPPPLQAFKIPPLLVNGCNTKNINQNPTSKPSSASPKPLRSLLHAEMA 240
           TLLVAGPLPQWRNPPPLQAFKIP LLVNGCNTKNINQN  SKPSS SPKPL SLLH EM 
Sbjct: 192 TLLVAGPLPQWRNPPPLQAFKIPSLLVNGCNTKNINQNLPSKPSSPSPKPLHSLLHTEMF 251

Query: 241 RGSSQICSASSMLSFTNGPSGSCFNSALLMAQNVNHPQILAVKRQKIQ 288
           RGSSQICSASSM S         FNSA LMA NVN  QILA KRQKIQ
Sbjct: 252 RGSSQICSASSMFS---------FNSAFLMAPNVN-TQILAAKRQKIQ 288

[Close]

BLAST of HG10001442.1 vs. TAIR 10
Match: AT2G28690.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 146.4 bits (368), Expect = 3.6e-35
Identity = 93/206 (45.15%), Postives = 125/206 (60.68%), Query Frame = 0


Query: 2   EASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKFMPTTATELPALLHFQPESP 61
           +A+EE+  ++E+VK+LL LL+ A +ERDEA+DQLQKL+                      
Sbjct: 34  KANEETKLHQEEVKNLLHLLKLARQERDEAKDQLQKLLT--------------------- 93

Query: 62  LNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADS--SRISFVN 121
                K NSSITESN         S+GSSP DSFF+ VSS +FS  NM     +++ F N
Sbjct: 94  ----IKTNSSITESN---------SHGSSPVDSFFEPVSSSEFSNFNMVPEPINQVKFKN 153

Query: 122 QPFVTEYNPPQPPLAIGLDTPKTEKADPFSAVIDNLVKGRALPQKGKLLQAVTEAGPLLQ 181
           +  +   N               +K DP  A++D ++KG+ALP+KGKLLQ V E+GPLLQ
Sbjct: 154 RQQLVNRN--------------LKKIDPVDALMDEIIKGKALPEKGKLLQTVMESGPLLQ 191

Query: 182 TLLVAGPLPQWRNPPPL-QAFKIPPL 205
           TLLVAGPLP+WRNPPPL Q+F++PP+
Sbjct: 214 TLLVAGPLPRWRNPPPLQQSFRVPPI 191

[Close]

BLAST of HG10001442.1 vs. TAIR 10
Match: AT5G22930.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 82.8 bits (203), Expect = 4.9e-16
Identity = 75/220 (34.09%), Postives = 105/220 (47.73%), Query Frame = 0


Query: 1   MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKFMPTTATELPALLHFQPES 60
           M A EE  K  E++  L  +L    +ERDEA ++ Q+LM       +  L    H  P  
Sbjct: 39  MFAYEEIRKRDEQLIHLKDILTKTIKERDEALEKCQRLM-----FDSHSLQQQKHMTP-- 98

Query: 61  PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSRISFVNQ 120
               P    SSI +     +                   S+  FS+++  +S     +  
Sbjct: 99  ----PLSGASSIEDEQVQPQQLR----------------SNKSFSSSDCEES-----IMS 158

Query: 121 PFVTEYNPPQPPLAIGLDTPKTEKADPFSAVIDNLVKGRALPQKGKLLQAVTEAGPLLQT 180
           P     NPP   L         E+      ++D L++ + LP+KGKLLQAV +AGPLLQT
Sbjct: 159 PTDHIMNPPPCQL---------EEVSGTEIIMDPLLQDKPLPEKGKLLQAVIKAGPLLQT 217

Query: 181 LLVAGPLPQWRN-PPPLQAFKIPPLLV------NGCNTKN 214
           LL+AGPLPQWR+ PPPL++F+IPP+ V      NGC   N
Sbjct: 219 LLLAGPLPQWRHPPPPLKSFEIPPVTVQCPIVNNGCGKFN 217

[Close]

BLAST of HG10001442.1 vs. TAIR 10
Match: AT5G59760.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 82.8 bits (203), Expect = 4.9e-16
Identity = 74/211 (35.07%), Postives = 105/211 (49.76%), Query Frame = 0


Query: 1   MEASEESIKNKEKVKSLLLLLQAAYEERDEARDQLQKLMNKFMPTTATELPALLHFQPES 60
           MEA+E+S  ++E+V  LL LL+   +ERDEAR QL +               + H Q ++
Sbjct: 34  MEANEKSRTHREEVNQLLNLLKFTQQERDEARQQLSQF--------------IFHTQ-QN 93

Query: 61  PLNIPTKANSSITESNSLYETYNHHSYGSSPADSFFDGVSSPDFSTANMADSSRISFVNQ 120
           P       + S+T+SNS   + +  S  SS   +F +    P     N+ D         
Sbjct: 94  P------NSRSLTKSNSFSHSQDVSSSSSSELSTFLNIHPQP---LTNLEDP-------- 153

Query: 121 PFVTEYNPPQPPLAIGLDTPKTEKADPFSAVIDNLVKGRALPQKGKLLQAVTEAGPLLQT 180
              T +N  Q             + DP    +D LV G+A P+ GKLL+AV EAGPLL+T
Sbjct: 154 ---TAHNHHQ-------------QIDP----LDVLVMGKAFPETGKLLKAVVEAGPLLET 192

Query: 181 LLVAGPLPQWRNPPP---LQAFKIPPLLVNG 209
           LL+AGPLP+W NPPP    Q F++P +   G
Sbjct: 214 LLLAGPLPKWINPPPQTQSQRFELPSISFRG 192

[Close]

BLAST of HG10001442.1 vs. TAIR 10
Match: AT3G44940.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 77.8 bits (190), Expect = 1.6e-14
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 0


Query: 151 VIDNLVKGRALPQKGKLLQAVTEAGPLLQTLLVAGPLPQWRN-PPPLQAFKIPPLLV--- 210
           ++  L+  + LP+KGKLLQAV +AGPLLQTLL+AGPLPQWR+ PPPL+  +IPP+ +   
Sbjct: 157 MLATLLPDKPLPEKGKLLQAVIKAGPLLQTLLLAGPLPQWRHPPPPLETSEIPPVTIPLP 216

Query: 211 ----NGCNTKN 214
               NGC   N
Sbjct: 217 QFQNNGCGNSN 227

[Close]

BLAST of HG10001442.1 vs. TAIR 10
Match: AT2G28140.1 (Protein of unknown function (DUF1635) )

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-13
Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 0


Query: 130 QPPLAIGLDTPKTEKADPFSAVIDNLVKGRALPQKGKLLQAVTEAGPLLQTLLVAGPLPQ 189
           +PP+ I LD P+                   LP+KGKLL+AV +AGPLLQTLL+AG LPQ
Sbjct: 116 EPPVEIELDFPE-----------------MTLPEKGKLLKAVVKAGPLLQTLLLAGQLPQ 175

Query: 190 WRNPPP-LQAFKIPPLLV 207
           WR+PPP L++F+IPP+++
Sbjct: 176 WRHPPPQLESFEIPPVII 176

The following BLAST results are available for this feature:

BLAST of HG10001442.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448366.1	1.8e-140	92.73	PREDICTED: putative protein TPRXL [Cucumis melo]	[more]
KAA0061953.1	1.8e-140	92.73	TPRXL protein [Cucumis melo var. makuwa] >TYK23977.1 TPRXL protein [Cucumis melo...	[more]
XP_011657251.1	8.7e-140	92.04	uncharacterized protein LOC101217302 [Cucumis sativus] >KGN47356.1 hypothetical ...	[more]
KAG6605486.1	1.9e-131	89.58	hypothetical protein SDJN03_02803, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022948173.1	1.9e-131	89.58	uncharacterized protein LOC111451829 [Cucurbita moschata] >KAG7035428.1 hypothet...	[more]

BLAST of HG10001442.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10001442.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V1C9	8.5e-141	92.73	TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00400 ...	[more]
A0A1S3BKE0	8.5e-141	92.73	Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103490578 PE=4 SV=1	[more]
A0A0A0KHV7	4.2e-140	92.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G303220 PE=4 SV=1	[more]
A0A6J1G8N0	9.4e-132	89.58	uncharacterized protein LOC111451829 OS=Cucurbita moschata OX=3662 GN=LOC1114518...	[more]
A0A6J1L7E2	3.2e-124	86.81	uncharacterized protein LOC111499860 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of HG10001442.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28690.1	3.6e-35	45.15	Protein of unknown function (DUF1635)	[more]
AT5G22930.1	4.9e-16	34.09	Protein of unknown function (DUF1635)	[more]
AT5G59760.1	4.9e-16	35.07	Protein of unknown function (DUF1635)	[more]
AT3G44940.1	1.6e-14	54.93	Protein of unknown function (DUF1635)	[more]
AT2G28140.1	1.8e-13	50.00	Protein of unknown function (DUF1635)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 14..41
None	No IPR available	PANTHER	PTHR33431:SF12	HIGH MOBILITY GROUP BOX PROTEIN, PUTATIVE (DUF1635)-RELATED	coord: 1..286
IPR012862	Protein of unknown function DUF1635	PFAM	PF07795	DUF1635	coord: 1..216 e-value: 5.4E-39 score: 134.4
IPR012862	Protein of unknown function DUF1635	PANTHER	PTHR33431	ENABLED-LIKE PROTEIN (DUF1635)	coord: 1..286

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10001442	HG10001442	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10001442.1-cds	HG10001442.1-cds-Chr09:17193650..17194513	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10001442.1	HG10001442.1-protein	polypeptide