HG10000807.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10000807.1
Type	mRNA
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Glyco_hydro_18 domain-containing protein
Location	Chr09: 9671942 .. 9672742 (+)
Sequence length	801
RNA-Seq Expression	HG10000807.1
Synteny	HG10000807.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAGTACATCGGAGCGACAGGCATTCCGATCACATTTGATAACGTCCCGATCTTCGATGATATTGACTTCCATTTCATTCTCAGCTTCGCCATTGATGCAGATTCTTCTGCCATTCCTCAAAATGGGAAGTTCTCCCCATATTGGGAGCCCTCCCTAACCCCAGATTCAGTTGCAGCCATTAAAGCCCAACACCCCAACGTTAAAGCCCTAGCCAGCCTCTCCGGTTGGAGCCTCAACGACATCGTCCTCCGATGGCGCAACCCTCCAAACCCCAATCTCTGGATCTCCAATGCCTTCTCCACTCTCCAAGACCTCGTTGTCAAATACCACCTCGATGGCATTGACATCGACTACGAGAACTTCCCGAAACATGGCTCCAACTTCGCCTTCTGCATCGGCGAGCTCATAACCCTATTGAAGAACCAAAGCATAATCTCAGTAGCCACAATTGCACCGTATTACTCGACGGTTTCGCCGTACTTGGAGCTCTTTCATGGCTATGAGAAGGTGATTGATTTTGTGAACTACCAATTTTACACTGACAAGGTGACAACTGCAGAGGCATATTTGAAGAGATTTGAGGTTCGAGCTAAGGAGTTTGGAAGTGTAAAGTTATTGCCGAGCTATGAGGTGAATGGAAGAGGGATTCAAGGGGATGCTTTTTTTGAAGCTTTGAGTTTGTTGGATGAAAATGGATTTGATGTTAATGGAGTCATGATCTTCTCTGCAGATGCTTCCTTGTCCAATGACTTCCATTTCGAAACCAAATCTCAACAATTCTTGCTAAATATTTAA

mRNA sequence

ATGATGGAGTACATCGGAGCGACAGGCATTCCGATCACATTTGATAACGTCCCGATCTTCGATGATATTGACTTCCATTTCATTCTCAGCTTCGCCATTGATGCAGATTCTTCTGCCATTCCTCAAAATGGGAAGTTCTCCCCATATTGGGAGCCCTCCCTAACCCCAGATTCAGTTGCAGCCATTAAAGCCCAACACCCCAACGTTAAAGCCCTAGCCAGCCTCTCCGGTTGGAGCCTCAACGACATCGTCCTCCGATGGCGCAACCCTCCAAACCCCAATCTCTGGATCTCCAATGCCTTCTCCACTCTCCAAGACCTCGTTGTCAAATACCACCTCGATGGCATTGACATCGACTACGAGAACTTCCCGAAACATGGCTCCAACTTCGCCTTCTGCATCGGCGAGCTCATAACCCTATTGAAGAACCAAAGCATAATCTCAGTAGCCACAATTGCACCGTATTACTCGACGGTTTCGCCGTACTTGGAGCTCTTTCATGGCTATGAGAAGGTGATTGATTTTGTGAACTACCAATTTTACACTGACAAGGTGACAACTGCAGAGGCATATTTGAAGAGATTTGAGGTTCGAGCTAAGGAGTTTGGAAGTGTAAAGTTATTGCCGAGCTATGAGGTGAATGGAAGAGGGATTCAAGGGGATGCTTTTTTTGAAGCTTTGAGTTTGTTGGATGAAAATGGATTTGATGTTAATGGAGTCATGATCTTCTCTGCAGATGCTTCCTTGTCCAATGACTTCCATTTCGAAACCAAATCTCAACAATTCTTGCTAAATATTTAA

Coding sequence (CDS)

ATGATGGAGTACATCGGAGCGACAGGCATTCCGATCACATTTGATAACGTCCCGATCTTCGATGATATTGACTTCCATTTCATTCTCAGCTTCGCCATTGATGCAGATTCTTCTGCCATTCCTCAAAATGGGAAGTTCTCCCCATATTGGGAGCCCTCCCTAACCCCAGATTCAGTTGCAGCCATTAAAGCCCAACACCCCAACGTTAAAGCCCTAGCCAGCCTCTCCGGTTGGAGCCTCAACGACATCGTCCTCCGATGGCGCAACCCTCCAAACCCCAATCTCTGGATCTCCAATGCCTTCTCCACTCTCCAAGACCTCGTTGTCAAATACCACCTCGATGGCATTGACATCGACTACGAGAACTTCCCGAAACATGGCTCCAACTTCGCCTTCTGCATCGGCGAGCTCATAACCCTATTGAAGAACCAAAGCATAATCTCAGTAGCCACAATTGCACCGTATTACTCGACGGTTTCGCCGTACTTGGAGCTCTTTCATGGCTATGAGAAGGTGATTGATTTTGTGAACTACCAATTTTACACTGACAAGGTGACAACTGCAGAGGCATATTTGAAGAGATTTGAGGTTCGAGCTAAGGAGTTTGGAAGTGTAAAGTTATTGCCGAGCTATGAGGTGAATGGAAGAGGGATTCAAGGGGATGCTTTTTTTGAAGCTTTGAGTTTGTTGGATGAAAATGGATTTGATGTTAATGGAGTCATGATCTTCTCTGCAGATGCTTCCTTGTCCAATGACTTCCATTTCGAAACCAAATCTCAACAATTCTTGCTAAATATTTAA

Protein sequence

MMEYIGATGIPITFDNVPIFDDIDFHFILSFAIDADSSAIPQNGKFSPYWEPSLTPDSVAAIKAQHPNVKALASLSGWSLNDIVLRWRNPPNPNLWISNAFSTLQDLVVKYHLDGIDIDYENFPKHGSNFAFCIGELITLLKNQSIISVATIAPYYSTVSPYLELFHGYEKVIDFVNYQFYTDKVTTAEAYLKRFEVRAKEFGSVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVMIFSADASLSNDFHFETKSQQFLLNI

Homology

[Close]

BLAST of HG10000807.1 vs. NCBI nr
Match: XP_038900927.1 (chitinase 1-like [Benincasa hispida])

HSP 1 Score: 519.2 bits (1336), Expect = 2.0e-143
Identity = 251/265 (94.72%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MMEYIGATGIPITFDNVPIFDDIDFHFILSFAIDADSSAIPQNGKFSPYWEPSLTPDSVA 60
           MMEYIGATG+PITF+NVPIFDDIDFHFILSFAIDAD SA PQNGKFSPYWEPSLTP+SVA
Sbjct: 1   MMEYIGATGVPITFNNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWEPSLTPESVA 60

Query: 61  AIKAQHPNVKALASLSGWSLNDIVLRWRNPPNPNLWISNAFSTLQDLVVKYHLDGIDIDY 120
           AIKAQHPNVKALASLSGWSL++IVLRWRNPPNPNLWISNAFSTLQDLVVKYHLDGID+DY
Sbjct: 61  AIKAQHPNVKALASLSGWSLDNIVLRWRNPPNPNLWISNAFSTLQDLVVKYHLDGIDVDY 120

Query: 121 ENFPKHGSNFAFCIGELITLLKNQSIISVATIAPYYSTVSPYLELFHGYEKVIDFVNYQF 180
           ENFP+HGSNFAFCIGELITLLKNQS+ISVATIAPYYSTV PYLELFHGY KVIDFVNYQF
Sbjct: 121 ENFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQF 180

Query: 181 YTDKVTTAEAYLKRFEVRAKEFGSVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV 240
           YTDKVTTAEAYLKRFEVRAKEFG  KLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV
Sbjct: 181 YTDKVTTAEAYLKRFEVRAKEFGRGKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV 240

Query: 241 MIFSADASLSNDFHFETKSQQFLLN 266
           MIFSADASLSNDFHFETKSQQFLLN
Sbjct: 241 MIFSADASLSNDFHFETKSQQFLLN 265

[Close]

BLAST of HG10000807.1 vs. NCBI nr
Match: XP_008460896.1 (PREDICTED: chitinase 2-like [Cucumis melo])

HSP 1 Score: 513.1 bits (1320), Expect = 1.5e-141
Identity = 248/265 (93.58%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MMEYIGATGIPITFDNVPIFDDIDFHFILSFAIDADSSAIPQNGKFSPYWEPSLTPDSVA 60
           MMEYIGATGIP+TFDNVPIFDDIDFHFILSFAIDAD SA PQNGKFSPYWEPSLTP+SVA
Sbjct: 35  MMEYIGATGIPVTFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWEPSLTPESVA 94

Query: 61  AIKAQHPNVKALASLSGWSLNDIVLRWRNPPNPNLWISNAFSTLQDLVVKYHLDGIDIDY 120
           AIKAQHPNVKALASLSGWSL++IVLRWRNPP+PNLWISNAFSTLQDLV KYHLDGID+DY
Sbjct: 95  AIKAQHPNVKALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNKYHLDGIDVDY 154

Query: 121 ENFPKHGSNFAFCIGELITLLKNQSIISVATIAPYYSTVSPYLELFHGYEKVIDFVNYQF 180
           ENFP+HGSNFAFCIGELITLLKNQS+ISVATIAPYYSTV PYLELFHGY KVIDFVNYQF
Sbjct: 155 ENFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQF 214

Query: 181 YTDKVTTAEAYLKRFEVRAKEFGSVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV 240
           YTDKVTT EAYLKRFE+RAKEFGS KLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV
Sbjct: 215 YTDKVTTPEAYLKRFEIRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV 274

Query: 241 MIFSADASLSNDFHFETKSQQFLLN 266
           MIFSADASLSNDF FETKSQQFLLN
Sbjct: 275 MIFSADASLSNDFLFETKSQQFLLN 299

[Close]

BLAST of HG10000807.1 vs. NCBI nr
Match: NP_001315393.1 (chitinase 2-like [Cucumis melo] >KAA0040764.1 chitinase 2-like [Cucumis melo var. makuwa] >AMP41494.1 chitinase 1 [Cucumis melo] >ANB86002.1 chitinase 1 [Cucumis melo] >ANB86006.1 chitinase 1 [Cucumis melo] >AXM43888.1 chitinase A [Cucumis melo])

HSP 1 Score: 511.1 bits (1315), Expect = 5.6e-141
Identity = 247/264 (93.56%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 2   MEYIGATGIPITFDNVPIFDDIDFHFILSFAIDADSSAIPQNGKFSPYWEPSLTPDSVAA 61
           MEYIGATGIP+TFDNVPIFDDIDFHFILSFAIDAD SA PQNGKFSPYWEPSLTP+SVAA
Sbjct: 1   MEYIGATGIPVTFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWEPSLTPESVAA 60

Query: 62  IKAQHPNVKALASLSGWSLNDIVLRWRNPPNPNLWISNAFSTLQDLVVKYHLDGIDIDYE 121
           IKAQHPNVKALASLSGWSL++IVLRWRNPP+PNLWISNAFSTLQDLV KYHLDGID+DYE
Sbjct: 61  IKAQHPNVKALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNKYHLDGIDVDYE 120

Query: 122 NFPKHGSNFAFCIGELITLLKNQSIISVATIAPYYSTVSPYLELFHGYEKVIDFVNYQFY 181
           NFP+HGSNFAFCIGELITLLKNQS+ISVATIAPYYSTV PYLELFHGY KVIDFVNYQFY
Sbjct: 121 NFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQFY 180

Query: 182 TDKVTTAEAYLKRFEVRAKEFGSVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM 241
           TDKVTT EAYLKRFE+RAKEFGS KLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM
Sbjct: 181 TDKVTTPEAYLKRFEIRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM 240

Query: 242 IFSADASLSNDFHFETKSQQFLLN 266
           IFSADASLSNDF FETKSQQFLLN
Sbjct: 241 IFSADASLSNDFLFETKSQQFLLN 264

[Close]

BLAST of HG10000807.1 vs. NCBI nr
Match: KAE8651981.1 (hypothetical protein Csa_005942 [Cucumis sativus])

HSP 1 Score: 509.6 bits (1311), Expect = 1.6e-140
Identity = 246/265 (92.83%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MMEYIGATGIPITFDNVPIFDDIDFHFILSFAIDADSSAIPQNGKFSPYWEPSLTPDSVA 60
           MMEYIGATGIPITFDNVPIFDDIDFHFILSFAIDAD SA PQNGKFSPYW+PSLTP+SVA
Sbjct: 19  MMEYIGATGIPITFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWQPSLTPESVA 78

Query: 61  AIKAQHPNVKALASLSGWSLNDIVLRWRNPPNPNLWISNAFSTLQDLVVKYHLDGIDIDY 120
           AIKAQHPNVKALASLSGWSL++IVLRWRNPP+PNLWISNAFSTLQDLV +YHLDGID+DY
Sbjct: 79  AIKAQHPNVKALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNEYHLDGIDVDY 138

Query: 121 ENFPKHGSNFAFCIGELITLLKNQSIISVATIAPYYSTVSPYLELFHGYEKVIDFVNYQF 180
           ENFP+HGSNFAFCIGELITLLKNQS+ISVATIAPYYSTV PYLELFHGY KVIDFVNYQF
Sbjct: 139 ENFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQF 198

Query: 181 YTDKVTTAEAYLKRFEVRAKEFGSVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV 240
           YTDKVTTAEAYLKRF+ RAKEFGS KLLPSYEVNGRGIQGDAFFEALSLLDENGFD+NGV
Sbjct: 199 YTDKVTTAEAYLKRFKTRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDINGV 258

Query: 241 MIFSADASLSNDFHFETKSQQFLLN 266
           MIFSADASLSNDF FETKSQQFLLN
Sbjct: 259 MIFSADASLSNDFLFETKSQQFLLN 283

[Close]

BLAST of HG10000807.1 vs. NCBI nr
Match: XP_004147371.1 (chitinase 1 [Cucumis sativus])

HSP 1 Score: 509.6 bits (1311), Expect = 1.6e-140
Identity = 246/265 (92.83%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MMEYIGATGIPITFDNVPIFDDIDFHFILSFAIDADSSAIPQNGKFSPYWEPSLTPDSVA 60
           MMEYIGATGIPITFDNVPIFDDIDFHFILSFAIDAD SA PQNGKFSPYW+PSLTP+SVA
Sbjct: 1   MMEYIGATGIPITFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWQPSLTPESVA 60

Query: 61  AIKAQHPNVKALASLSGWSLNDIVLRWRNPPNPNLWISNAFSTLQDLVVKYHLDGIDIDY 120
           AIKAQHPNVKALASLSGWSL++IVLRWRNPP+PNLWISNAFSTLQDLV +YHLDGID+DY
Sbjct: 61  AIKAQHPNVKALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNEYHLDGIDVDY 120

Query: 121 ENFPKHGSNFAFCIGELITLLKNQSIISVATIAPYYSTVSPYLELFHGYEKVIDFVNYQF 180
           ENFP+HGSNFAFCIGELITLLKNQS+ISVATIAPYYSTV PYLELFHGY KVIDFVNYQF
Sbjct: 121 ENFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQF 180

Query: 181 YTDKVTTAEAYLKRFEVRAKEFGSVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV 240
           YTDKVTTAEAYLKRF+ RAKEFGS KLLPSYEVNGRGIQGDAFFEALSLLDENGFD+NGV
Sbjct: 181 YTDKVTTAEAYLKRFKTRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDINGV 240

Query: 241 MIFSADASLSNDFHFETKSQQFLLN 266
           MIFSADASLSNDF FETKSQQFLLN
Sbjct: 241 MIFSADASLSNDFLFETKSQQFLLN 265

[Close]

BLAST of HG10000807.1 vs. ExPASy Swiss-Prot
Match: Q9SLP4 (Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.2e-47
Identity = 110/274 (40.15%), Postives = 165/274 (60.22%), Query Frame = 0


Query: 3   EYIGATGIPITFDNVPIFDDIDFHFILSFAID--ADSSAIPQNGKFSPYWEP-SLTPDSV 62
           EYIG+    + F +VPI  D+DFHFIL+FAID  + SS  P NG F P+W+  +L+P  V
Sbjct: 31  EYIGSQFNDVKFSDVPINPDVDFHFILAFAIDYTSGSSPTPTNGNFKPFWDTNNLSPSQV 90

Query: 63  AAIKAQHPNVKALASLSGWSLNDIVLRWRNPPNPNLWISNAFSTLQDLVVKYHLDGIDID 122
           AA+K  H NVK   SL G S+    + + +P + + W+ NA S+L  ++ +YHLDGIDID
Sbjct: 91  AAVKRTHSNVKVSLSLGGDSVGGKNV-FFSPSSVSSWVENAVSSLTRIIKQYHLDGIDID 150

Query: 123 YENFPKHGSNFAFCIGELITLLKNQSIISVATIAPY--YSTVSPYLELFHGYEKVIDFVN 182
           YE+F    + FA CIG+L+T LK   ++S  +IAP+      S Y  L+  Y   ID+VN
Sbjct: 151 YEHFKGDPNTFAECIGQLVTRLKKNEVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVN 210

Query: 183 YQFYTDKV-TTAEAYLKRFEVRAKEFGSVKLLPSYEVNGRG--IQGDAFFEALSLLDENG 242
           +QFY     T+ E +LK FE ++  +   K+L S+  +  G     + FF A S+L + G
Sbjct: 211 FQFYAYSARTSVEQFLKYFEEQSSNYHGGKVLVSFSTDSSGGLKPDNGFFRACSILKKQG 270

Query: 243 FDVNGVMIFSADASL--SNDFHFETKSQQFLLNI 267
             ++G+ ++SAD SL  +N F +E ++Q  L ++
Sbjct: 271 -KLHGIFVWSADDSLMSNNVFRYEMQAQSMLASV 302

[Close]

BLAST of HG10000807.1 vs. ExPASy Swiss-Prot
Match: Q7M443 (Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-46
Identity = 112/271 (41.33%), Postives = 165/271 (60.89%), Query Frame = 0


Query: 3   EYIGATGIPITFDNVPIFDDIDFHFILSFAID--ADSSAIPQNGKFSPYWEP-SLTPDSV 62
           EYIGA    + F +VPI  ++DFHFIL+FAID  + SS  P NG F+P+W+  +L+P  V
Sbjct: 5   EYIGAQFNDVKFSDVPINPNVDFHFILAFAIDYTSGSSPTPTNGNFNPFWDTNNLSPSQV 64

Query: 63  AAIKAQHPNVKALASLSGWSLNDIVLRWRNPPNPNLWISNAFSTLQDLVVKYHLDGIDID 122
           AAIK  + NVK   SL G S+    + + NP + + W+ NA S+L  ++ +YHLDGIDID
Sbjct: 65  AAIKRTYNNVKVSVSLGGNSVGGERV-FFNPSSVSSWVDNAVSSLTKIIKQYHLDGIDID 124

Query: 123 YENFPKHGSNFAFCIGELITLLKNQSIISVATIAPY--YSTVSPYLELFHGYEKVIDFVN 182
           YE+F    + FA CIG+L+T LK   ++S  +IAP+      S Y  L+  Y   ID+VN
Sbjct: 125 YEHFKGDPNTFAECIGQLVTRLKKNGVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVN 184

Query: 183 YQFYT-DKVTTAEAYLKRFEVRAKEFGSVKLLPSYEVNGRG--IQGDAFFEALSLLDENG 242
           +QFY      + E +LK FE++   +   K+L S+  +  G     + FF+A S+L + G
Sbjct: 185 FQFYVYSSRMSVEQFLKYFEMQRSNYPGGKVLVSFSTDNSGGLKPRNGFFDACSILKKQG 244

Query: 243 FDVNGVMIFSADASL-SND-FHFETKSQQFL 264
             ++G+ ++SAD SL SND F +E ++Q  L
Sbjct: 245 -KLHGIFVWSADDSLMSNDVFKYEMQAQSLL 273

[Close]

BLAST of HG10000807.1 vs. ExPASy Swiss-Prot
Match: P39657 (RuBisCO-associated protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.0e-12
Identity = 43/135 (31.85%), Postives = 70/135 (51.85%), Query Frame = 0


Query: 24  DFHFILSFAIDADSSAIPQNGKFSPYWE-PSLTPDSVAAIKAQHP----NVKALASLSGW 83
           +F   LS A D D +    NGKF PYW+   +TP+ +   K ++      VK L S+ G 
Sbjct: 28  EFQVTLSLARDYDGNN-STNGKFIPYWDTEKVTPEVIKKFKKKYEPTALRVKVLVSI-GN 87

Query: 84  SLNDIVLRWRNPPNPNLWISNAFSTLQDLVVKYHLDGIDIDYENFPKHGSNFAFCIGELI 143
                     +  N   W+S A ++L+ ++  Y+LDGID+ YE+   + ++F   +G L+
Sbjct: 88  KNKQFPFTIGSDSNSEAWVSEATASLKSIIKTYNLDGIDVSYEDIAANEADFVNSVGGLV 147

Query: 144 TLLKNQSIISVATIA 154
             LK   +I+VA+ A
Sbjct: 148 RNLKQNKLITVASFA 160

[Close]

BLAST of HG10000807.1 vs. ExPASy TrEMBL
Match: A0A1S3CD03 (chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103499637 PE=3 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 7.1e-142
Identity = 248/265 (93.58%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MMEYIGATGIPITFDNVPIFDDIDFHFILSFAIDADSSAIPQNGKFSPYWEPSLTPDSVA 60
           MMEYIGATGIP+TFDNVPIFDDIDFHFILSFAIDAD SA PQNGKFSPYWEPSLTP+SVA
Sbjct: 35  MMEYIGATGIPVTFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWEPSLTPESVA 94

Query: 61  AIKAQHPNVKALASLSGWSLNDIVLRWRNPPNPNLWISNAFSTLQDLVVKYHLDGIDIDY 120
           AIKAQHPNVKALASLSGWSL++IVLRWRNPP+PNLWISNAFSTLQDLV KYHLDGID+DY
Sbjct: 95  AIKAQHPNVKALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNKYHLDGIDVDY 154

Query: 121 ENFPKHGSNFAFCIGELITLLKNQSIISVATIAPYYSTVSPYLELFHGYEKVIDFVNYQF 180
           ENFP+HGSNFAFCIGELITLLKNQS+ISVATIAPYYSTV PYLELFHGY KVIDFVNYQF
Sbjct: 155 ENFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQF 214

Query: 181 YTDKVTTAEAYLKRFEVRAKEFGSVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV 240
           YTDKVTT EAYLKRFE+RAKEFGS KLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV
Sbjct: 215 YTDKVTTPEAYLKRFEIRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV 274

Query: 241 MIFSADASLSNDFHFETKSQQFLLN 266
           MIFSADASLSNDF FETKSQQFLLN
Sbjct: 275 MIFSADASLSNDFLFETKSQQFLLN 299

[Close]

BLAST of HG10000807.1 vs. ExPASy TrEMBL
Match: A0A142BTQ6 (Chitinase 1 OS=Cucumis melo OX=3656 GN=cht1 PE=2 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 2.7e-141
Identity = 247/264 (93.56%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 2   MEYIGATGIPITFDNVPIFDDIDFHFILSFAIDADSSAIPQNGKFSPYWEPSLTPDSVAA 61
           MEYIGATGIP+TFDNVPIFDDIDFHFILSFAIDAD SA PQNGKFSPYWEPSLTP+SVAA
Sbjct: 1   MEYIGATGIPVTFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWEPSLTPESVAA 60

Query: 62  IKAQHPNVKALASLSGWSLNDIVLRWRNPPNPNLWISNAFSTLQDLVVKYHLDGIDIDYE 121
           IKAQHPNVKALASLSGWSL++IVLRWRNPP+PNLWISNAFSTLQDLV KYHLDGID+DYE
Sbjct: 61  IKAQHPNVKALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNKYHLDGIDVDYE 120

Query: 122 NFPKHGSNFAFCIGELITLLKNQSIISVATIAPYYSTVSPYLELFHGYEKVIDFVNYQFY 181
           NFP+HGSNFAFCIGELITLLKNQS+ISVATIAPYYSTV PYLELFHGY KVIDFVNYQFY
Sbjct: 121 NFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQFY 180

Query: 182 TDKVTTAEAYLKRFEVRAKEFGSVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM 241
           TDKVTT EAYLKRFE+RAKEFGS KLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM
Sbjct: 181 TDKVTTPEAYLKRFEIRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM 240

Query: 242 IFSADASLSNDFHFETKSQQFLLN 266
           IFSADASLSNDF FETKSQQFLLN
Sbjct: 241 IFSADASLSNDFLFETKSQQFLLN 264

[Close]

BLAST of HG10000807.1 vs. ExPASy TrEMBL
Match: A0A5D3BSJ5 (Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00670 PE=3 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 2.7e-141
Identity = 247/264 (93.56%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 2   MEYIGATGIPITFDNVPIFDDIDFHFILSFAIDADSSAIPQNGKFSPYWEPSLTPDSVAA 61
           MEYIGATGIP+TFDNVPIFDDIDFHFILSFAIDAD SA PQNGKFSPYWEPSLTP+SVAA
Sbjct: 1   MEYIGATGIPVTFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWEPSLTPESVAA 60

Query: 62  IKAQHPNVKALASLSGWSLNDIVLRWRNPPNPNLWISNAFSTLQDLVVKYHLDGIDIDYE 121
           IKAQHPNVKALASLSGWSL++IVLRWRNPP+PNLWISNAFSTLQDLV KYHLDGID+DYE
Sbjct: 61  IKAQHPNVKALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNKYHLDGIDVDYE 120

Query: 122 NFPKHGSNFAFCIGELITLLKNQSIISVATIAPYYSTVSPYLELFHGYEKVIDFVNYQFY 181
           NFP+HGSNFAFCIGELITLLKNQS+ISVATIAPYYSTV PYLELFHGY KVIDFVNYQFY
Sbjct: 121 NFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQFY 180

Query: 182 TDKVTTAEAYLKRFEVRAKEFGSVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM 241
           TDKVTT EAYLKRFE+RAKEFGS KLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM
Sbjct: 181 TDKVTTPEAYLKRFEIRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM 240

Query: 242 IFSADASLSNDFHFETKSQQFLLN 266
           IFSADASLSNDF FETKSQQFLLN
Sbjct: 241 IFSADASLSNDFLFETKSQQFLLN 264

[Close]

BLAST of HG10000807.1 vs. ExPASy TrEMBL
Match: A0A0A0LK30 (Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G302200 PE=3 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 3.0e-140
Identity = 245/264 (92.80%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 2   MEYIGATGIPITFDNVPIFDDIDFHFILSFAIDADSSAIPQNGKFSPYWEPSLTPDSVAA 61
           MEYIGATGIPITFDNVPIFDDIDFHFILSFAIDAD SA PQNGKFSPYW+PSLTP+SVAA
Sbjct: 1   MEYIGATGIPITFDNVPIFDDIDFHFILSFAIDADPSANPQNGKFSPYWQPSLTPESVAA 60

Query: 62  IKAQHPNVKALASLSGWSLNDIVLRWRNPPNPNLWISNAFSTLQDLVVKYHLDGIDIDYE 121
           IKAQHPNVKALASLSGWSL++IVLRWRNPP+PNLWISNAFSTLQDLV +YHLDGID+DYE
Sbjct: 61  IKAQHPNVKALASLSGWSLDNIVLRWRNPPDPNLWISNAFSTLQDLVNEYHLDGIDVDYE 120

Query: 122 NFPKHGSNFAFCIGELITLLKNQSIISVATIAPYYSTVSPYLELFHGYEKVIDFVNYQFY 181
           NFP+HGSNFAFCIGELITLLKNQS+ISVATIAPYYSTV PYLELFHGY KVIDFVNYQFY
Sbjct: 121 NFPRHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVLPYLELFHGYGKVIDFVNYQFY 180

Query: 182 TDKVTTAEAYLKRFEVRAKEFGSVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGVM 241
           TDKVTTAEAYLKRF+ RAKEFGS KLLPSYEVNGRGIQGDAFFEALSLLDENGFD+NGVM
Sbjct: 181 TDKVTTAEAYLKRFKTRAKEFGSAKLLPSYEVNGRGIQGDAFFEALSLLDENGFDINGVM 240

Query: 242 IFSADASLSNDFHFETKSQQFLLN 266
           IFSADASLSNDF FETKSQQFLLN
Sbjct: 241 IFSADASLSNDFLFETKSQQFLLN 264

[Close]

BLAST of HG10000807.1 vs. ExPASy TrEMBL
Match: A0A6J1I699 (chitinase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470313 PE=3 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 9.9e-136
Identity = 236/265 (89.06%), Postives = 252/265 (95.09%), Query Frame = 0


Query: 1   MMEYIGATGIPITFDNVPIFDDIDFHFILSFAIDADSSAIPQNGKFSPYWEPSLTPDSVA 60
           MMEYIGATGIPITFD+VPIFDDIDFHFILSFAIDAD S  PQNGKFS YWEPSLTP+SVA
Sbjct: 1   MMEYIGATGIPITFDSVPIFDDIDFHFILSFAIDADPSGNPQNGKFSNYWEPSLTPESVA 60

Query: 61  AIKAQHPNVKALASLSGWSLNDIVLRWRNPPNPNLWISNAFSTLQDLVVKYHLDGIDIDY 120
           AIKA+HPNVKALASLSGWSL D VLRW+NP NPNLWI+NAFSTL+ L++KYHLDGIDIDY
Sbjct: 61  AIKAEHPNVKALASLSGWSLGDTVLRWQNPRNPNLWITNAFSTLKALIIKYHLDGIDIDY 120

Query: 121 ENFPKHGSNFAFCIGELITLLKNQSIISVATIAPYYSTVSPYLELFHGYEKVIDFVNYQF 180
           ENFPKHGSNFAFCIGELITLLKNQS+ISVATIAPYYSTV+PYLELFHGY +VID+VNYQF
Sbjct: 121 ENFPKHGSNFAFCIGELITLLKNQSVISVATIAPYYSTVTPYLELFHGYGEVIDYVNYQF 180

Query: 181 YTDKVTTAEAYLKRFEVRAKEFGSVKLLPSYEVNGRGIQGDAFFEALSLLDENGFDVNGV 240
           YTDKV TA+AYLKRFEVRAKEFG  KLLPSYEVNGRGIQGDAFFEAL+LLDENGFD+NGV
Sbjct: 181 YTDKVRTAKAYLKRFEVRAKEFGGGKLLPSYEVNGRGIQGDAFFEALNLLDENGFDINGV 240

Query: 241 MIFSADASLSNDFHFETKSQQFLLN 266
           MIFSADASLSN FHFET+SQQFLLN
Sbjct: 241 MIFSADASLSNGFHFETRSQQFLLN 265

The following BLAST results are available for this feature:

BLAST of HG10000807.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900927.1	2.0e-143	94.72	chitinase 1-like [Benincasa hispida]	[more]
XP_008460896.1	1.5e-141	93.58	PREDICTED: chitinase 2-like [Cucumis melo]	[more]
NP_001315393.1	5.6e-141	93.56	chitinase 2-like [Cucumis melo] >KAA0040764.1 chitinase 2-like [Cucumis melo var...	[more]
KAE8651981.1	1.6e-140	92.83	hypothetical protein Csa_005942 [Cucumis sativus]	[more]
XP_004147371.1	1.6e-140	92.83	chitinase 1 [Cucumis sativus]	[more]

BLAST of HG10000807.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLP4	2.2e-47	40.15	Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1	[more]
Q7M443	1.4e-46	41.33	Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1	[more]
P39657	3.0e-12	31.85	RuBisCO-associated protein OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of HG10000807.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CD03	7.1e-142	93.58	chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103499637 PE=3 SV=1	[more]
A0A142BTQ6	2.7e-141	93.56	Chitinase 1 OS=Cucumis melo OX=3656 GN=cht1 PE=2 SV=1	[more]
A0A5D3BSJ5	2.7e-141	93.56	Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G006...	[more]
A0A0A0LK30	3.0e-140	92.80	Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G302...	[more]
A0A6J1I699	9.9e-136	89.06	chitinase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470313 PE=3 SV=1	[more]

BLAST of HG10000807.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000677	Chitinase-like	PRINTS	PR00551	2SGLOBULIN	coord: 59..77 score: 40.79 coord: 17..36 score: 37.5
IPR001223	Glycoside hydrolase family 18, catalytic domain	PFAM	PF00704	Glyco_hydro_18	coord: 28..194 e-value: 8.8E-14 score: 51.9
IPR001223	Glycoside hydrolase family 18, catalytic domain	PROSITE	PS51910	GH18_2	coord: 1..260 score: 19.298967
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 1..266 e-value: 2.3E-61 score: 209.7
None	No IPR available	PANTHER	PTHR46476	CHITINASE 2-LIKE	coord: 1..265
None	No IPR available	PANTHER	PTHR46476:SF9	CHITINASE 2-LIKE	coord: 1..265
IPR001579	Glycosyl hydrolases family 18 (GH18) active site	PROSITE	PS01095	GH18_1	coord: 113..121
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 18..260

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
HG10000807	HG10000807	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
HG10000807.1-cds	HG10000807.1-cds-Chr09:9671942..9672742	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
HG10000807.1	HG10000807.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0004568	chitinase activity