Cucsat.G9520.T2 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G9520.T2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	transcription factor MYB1R1
Location	ctg1673: 1847614 .. 1849605 (-)
RNA-Seq Expression	Cucsat.G9520.T2
Synteny	Cucsat.G9520.T2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTAAATTTTTATTATTATTTAACCTTGTGAAGAAAAAAAAAAAAGGGATGGTGTTGGATTTTGATTGGTGGTTGTTGGGTTTAGGGATTCCGTGGACGGAGGAAGAGCATAGGCTGTTTTTGTTGGGATTACAGAAAGTTGGGAAGGGAGATTGGAGAGGGATTTCGAGGAATTTTGTGAAGACACGTACGCCGACTCAGGTTGCAAGTCATGCTCAGAAATATTTTCTCCGACGGAATAATTTTAATCGGCGACGCCGTAGATCCAGTCTTTTCGATATCACTACTCACACCGTAAGTCCCCTTACCTAAATACTATACACATTAAATTTATCTTTTATTAATATAAAGTTTAGTTACATGACCCCTTGTCTTAAAAGCTCCAAAGTTCGAATATCAGCGCTAAGAAAAAATTAAACTTTGAATAATGAATGATTTAACTGTTATACATTTTCTTGTTTACAATTATAAAAATACCTATTCAAAATATAAATTTGTTCAAAGTTACAAGCAATCTAGAATAAAATAGCAAAGTTTTGGATCTAGTTTTGGTCTTTTTTCTTCATCAGGTTCTTAAGCTTCATCTTTTATTTTAAAATTTTTATTTGGTAACATTGTAACTTTAAAAGATAATAGGTGGTTCTAAAGAAAATTTTATCTTAATTTTTTATATTATTTTAGACGACAAATTTGTAGAATTGATGGAGGATCAAAATATGTGTGTGGAAAGGCTGATTATTAATTTCTTTTTTCATTTTCACAAAATTCTTTCGACTTTGTTAATAATTAAGTGCGATTATGAAGATGACTTTAATTAATTTTGTCACGACAGTATGTTTAATCATGAGTTCAATGTTAATGCTAAGAAAATTGCCTTTTTGAGTGGTTAAAAATGTTTTCTGAAAGTGATTTTAATTATTTTAAAAATTCAATTAAAAAATGAGATTGAATCATAAGAATTTTTCATATATACTTATTATTAGAAGAAAGTTATGATCTGGAGTTTGATAATATTCTCTTCTCTTAAACAGTATATAACACTAACTTCTAATTTTTTCAAAACAATAAGGATAGGATTTAATTTGATCGAGATCAAACACTATCAGGGGTACATTTCTTTTAACATATATATAAACAAGTCTAAATCTTTTATAACTGTATTTGATTTTTCCCCCCTGTTTAATTCGACATATATGAAGTTCACGAGCTCATCCAAGGAAGACGATTTGATATTTTCCGGTCACGAGGCAACGCAGCCACCGCTGCCACCATCAACGCCCCAAAAAGACAACACTCCAGGGAATTTCTCGGTGAAAATTCATCAAGCGAAACCACCTCCAGCCGCGGTGGCCAGCGGCGTCGTTGATAGCAAAGCCGTCGAGAGTACATTAACACTAAATTCATCAAATTATCCGGCAAAGCCATGCAATTCCAAAATCATTCGTCCAATTCCAATGCTTCCTCTATCACCATACCCCAAATTTGCGGAATTAAATATTAACGAGAGAATCCCAGAAGACCCTTTGCCTCTAACTTTAAAGCTCTCAACTTCACAGTCGGAGGGACAGTCACCGGCGGCGGCTTCACAGTCGTCCGGCAGTTTCCAGACAATGTCCGGCGGCGGAGACAGTATAGACATTGTCAGTGTTGCTTGAAGATTATTGTTGGGGGCATCATAGATTTAATAAAGAATAATAATTGCTTGGATTCAATTGGACAGTGGATAAAAATTAAAAAGGGATTCTACTTTTCTTTTTTTGTACAGATGAAATTTAATTGGTCCATAAGAAAAAGAAAGGTTCATAAGTTTAGATGTGGGGGACTGTGGTTTGACTTATTTAGTTCCTCTCATGACAGCCTCCTTCACCTATATCTTTCATAATGTTGGTTGTATTTCTATATATTTTTTTTAGAATTATTATGTTAATGTTCCTGTAATTCTTCCTAATCTAATGCTTTGTAGCTTGGAAAGAAATAATTGTTTGTTTAAAT

Coding sequence (CDS)

GGTAAATTTTTATTATTATTTAACCTTGTGAAGAAAAAAAAAAAAGGGATGGTGTTGGATTTTGATTGGTGGTTGTTGGGTTTAGGGATTCCGTGGACGGAGGAAGAGCATAGGCTGTTTTTGTTGGGATTACAGAAAGTTGGGAAGGGAGATTGGAGAGGGATTTCGAGGAATTTTGTGAAGACACGTACGCCGACTCAGGTTGCAAGTCATGCTCAGAAATATTTTCTCCGACGGAATAATTTTAATCGGCGACGCCGTAGATCCAGTCTTTTCGATATCACTACTCACACCTTCACGAGCTCATCCAAGGAAGACGATTTGATATTTTCCGGTCACGAGGCAACGCAGCCACCGCTGCCACCATCAACGCCCCAAAAAGACAACACTCCAGGGAATTTCTCGGTGAAAATTCATCAAGCGAAACCACCTCCAGCCGCGGTGGCCAGCGGCGTCGTTGATAGCAAAGCCGTCGAGAGTACATTAACACTAAATTCATCAAATTATCCGGCAAAGCCATGCAATTCCAAAATCATTCGTCCAATTCCAATGCTTCCTCTATCACCATACCCCAAATTTGCGGAATTAAATATTAACGAGAGAATCCCAGAAGACCCTTTGCCTCTAACTTTAAAGCTCTCAACTTCACAGTCGGAGGGACAGTCACCGGCGGCGGCTTCACAGTCGTCCGGCAGTTTCCAGACAATGTCCGGCGGCGGAGACAGTATAGACATTGTCAGTGTTGCTTGA

Protein sequence

GKFLLLFNLVKKKKKGMVLDFDWWLLGLGIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTHTFTSSSKEDDLIFSGHEATQPPLPPSTPQKDNTPGNFSVKIHQAKPPPAAVASGVVDSKAVESTLTLNSSNYPAKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLPLTLKLSTSQSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA

Homology

[Close]

BLAST of Cucsat.G9520.T2 vs. ExPASy Swiss-Prot
Match: Q2V9B0 (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.7e-33
Identity = 99/222 (44.59%), Postives = 127/222 (57.21%), Query Frame = 0


Query: 29  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 88
           G+PWTEEEH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRR+N NRRRRR
Sbjct: 94  GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRR 153

Query: 89  SSLFDITTHTFTSSSKEDDLIFSGHEATQPPLPPSTPQKDNTPGNFSVKIHQAKPPPAAV 148
           SSLFDITT + +    E+      ++   P + P+T     T            P    +
Sbjct: 154 SSLFDITTDSVSVMPIEE----VENKQEIPVVAPATLPTTKT------NAFPVAPTVGPI 213

Query: 149 ASGVVDSKAVESTLTLNSSNYPAKPCNSKIIRPIPMLPLSPYPKFA-ELNINERIPEDPL 208
              V   K+ E    L   +      +S ++ P+PM  + P P  A +LN N     +P 
Sbjct: 214 IFPVQIDKSREYPTLLRHDH----GNSSMLVGPVPMFSM-PNPSTAIDLNANHNSTIEPS 273

Query: 209 PLTLKLSTSQSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA 250
            L+L+LS S  +GQ   A+S    ++  MS   +   I+ VA
Sbjct: 274 SLSLRLSLSLDQGQ---ASSTRHSAYNVMSSFSNGESIIRVA 297

[Close]

BLAST of Cucsat.G9520.T2 vs. ExPASy Swiss-Prot
Match: Q9LVS0 (Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.6e-28
Identity = 69/143 (48.25%), Postives = 90/143 (62.94%), Query Frame = 0


Query: 29  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 88
           G PWTEEEHR+FLLGLQK+GKGDWRGISRN+V TRTPTQVASHAQKYF+R++N +RR+RR
Sbjct: 95  GTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRR 154

Query: 89  SSLFDITTHTFTSSSKEDDLIFSGHEATQPPLPPSTPQKDNTPGNFSVK----IHQAKPP 148
           SSLFD+                   E    P+    P++DN P    ++    IHQ   P
Sbjct: 155 SSLFDMVP----------------DEVGDIPMDLQEPEEDNIPVETEMQGADSIHQTLAP 214

Query: 149 PAAVASGVVDSKAVESTLTLNSS 168
            +  A  +++ +  ES  + NS+
Sbjct: 215 SSLHAPSILEIEECESMDSTNST 221

[Close]

BLAST of Cucsat.G9520.T2 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.6e-26
Identity = 73/146 (50.00%), Postives = 83/146 (56.85%), Query Frame = 0


Query: 29  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 88
           GIPWTEEEHRLFLLGL K GKGDWR ISRNFV +RTPTQVASHAQKYF+R N+ NR RRR
Sbjct: 141 GIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRR 200

Query: 89  SSLFDITTHTFTSS-SKEDDLIFSGHEATQPP--------------------LPPSTPQK 148
           SS+ DIT+ T     + +     +GH+AT  P                     PP  P  
Sbjct: 201 SSIHDITSVTAGDQVAAQQGAPITGHQATGNPAAAALGPPGMKHHHHHHPGGAPPPMPMY 260

Query: 149 DNTPGNFSVKIHQAKPPPAAVASGVV 154
              P    V  H     PAAV + VV
Sbjct: 261 SAAPMGHPVAGHMV---PAAVGTPVV 283

[Close]

BLAST of Cucsat.G9520.T2 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.6e-26
Identity = 73/146 (50.00%), Postives = 83/146 (56.85%), Query Frame = 0


Query: 29  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 88
           GIPWTEEEHRLFLLGL K GKGDWR ISRNFV +RTPTQVASHAQKYF+R N+ NR RRR
Sbjct: 141 GIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRR 200

Query: 89  SSLFDITTHTFTSS-SKEDDLIFSGHEATQPP--------------------LPPSTPQK 148
           SS+ DIT+ T     + +     +GH+AT  P                     PP  P  
Sbjct: 201 SSIHDITSVTAGDQVAAQQGAPITGHQATGNPAAAALGPPGMKHHHHHHPGGAPPPMPMY 260

Query: 149 DNTPGNFSVKIHQAKPPPAAVASGVV 154
              P    V  H     PAAV + VV
Sbjct: 261 SAAPMGHPVAGHMV---PAAVGTPVV 283

[Close]

BLAST of Cucsat.G9520.T2 vs. ExPASy Swiss-Prot
Match: Q7XC57 (Transcription factor MYBS3 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS3 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.4e-26
Identity = 62/105 (59.05%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 29  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 88
           G+PWTEEEHR FLLGLQK+GKGDWRGISRNFV +RTPTQVASHAQKYF+R++N  RR+RR
Sbjct: 93  GVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNMTRRKRR 152

Query: 89  SSLFDITTHTFTSSSKEDDLIFSGHE-----ATQPPLPPSTPQKD 129
           SSLFD+        S +   +  G E       QP LPP   +++
Sbjct: 153 SSLFDMV----PDESMDLPPLPGGQEPETQVLNQPALPPPREEEE 193

[Close]

BLAST of Cucsat.G9520.T2 vs. NCBI nr
Match: XP_004135214.1 (transcription factor MYB1R1 [Cucumis sativus] >KGN51855.1 hypothetical protein Csa_008396 [Cucumis sativus])

HSP 1 Score: 434 bits (1116), Expect = 2.01e-151
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 29  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 88
           GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR
Sbjct: 92  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 151

Query: 89  SSLFDITTHTFTSSSKEDDLIFSGHEATQPPLPPSTPQKDNTPGNFSVKIHQAKPPPAAV 148
           SSLFDITTHTFTSSSKEDDLIFSGHEATQPPLPPSTPQKDNTPGNFSVKIHQAKPPPAAV
Sbjct: 152 SSLFDITTHTFTSSSKEDDLIFSGHEATQPPLPPSTPQKDNTPGNFSVKIHQAKPPPAAV 211

Query: 149 ASGVVDSKAVESTLTLNSSNYPAKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP 208
           ASGVVDSKAVESTLTLNSSNYPAKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP
Sbjct: 212 ASGVVDSKAVESTLTLNSSNYPAKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP 271

Query: 209 LTLKLSTSQSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA 249
           LTLKLSTSQSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA
Sbjct: 272 LTLKLSTSQSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA 312

[Close]

BLAST of Cucsat.G9520.T2 vs. NCBI nr
Match: XP_008446280.1 (PREDICTED: transcription factor MYB1R1 [Cucumis melo] >KAA0034355.1 transcription factor MYB1R1 [Cucumis melo var. makuwa] >TYK15564.1 transcription factor MYB1R1 [Cucumis melo var. makuwa])

HSP 1 Score: 392 bits (1008), Expect = 4.17e-135
Identity = 205/221 (92.76%), Postives = 206/221 (93.21%), Query Frame = 0


Query: 29  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 88
           GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR
Sbjct: 91  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 150

Query: 89  SSLFDITTHTFTSSSKEDDLIFSGHEATQPPLPPSTPQKDNTPGNFSVKIHQAKPPPAAV 148
           SSLFDITTHTFTSSSKED       EA QPPLPPS PQKDNTPGNFSVKIH AKPPPA+V
Sbjct: 151 SSLFDITTHTFTSSSKED-------EAMQPPLPPSPPQKDNTPGNFSVKIHAAKPPPASV 210

Query: 149 ASGVVDSKAVESTLTLNSSNYPAKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP 208
            SGVVDSKAV STLTLNSSNY  KPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP
Sbjct: 211 VSGVVDSKAVVSTLTLNSSNYRGKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP 270

Query: 209 LTLKLSTSQSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA 249
           LTLKLSTS SEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA
Sbjct: 271 LTLKLSTSHSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA 304

[Close]

BLAST of Cucsat.G9520.T2 vs. NCBI nr
Match: XP_038891397.1 (transcription factor MYB1R1 [Benincasa hispida])

HSP 1 Score: 382 bits (981), Expect = 6.82e-131
Identity = 196/221 (88.69%), Postives = 199/221 (90.05%), Query Frame = 0


Query: 29  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 88
           GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR
Sbjct: 91  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 150

Query: 89  SSLFDITTHTFTSSSKEDDLIFSGHEATQPPLPPSTPQKDNTPGNFSVKIHQAKPPPAAV 148
           SSLFDITTHTFT+SS EDDL+FSGHE   PPLPPS PQKDN PGNF VKIH AKPPPAAV
Sbjct: 151 SSLFDITTHTFTNSSTEDDLMFSGHEVMPPPLPPSQPQKDNNPGNFPVKIHPAKPPPAAV 210

Query: 149 ASGVVDSKAVESTLTLNSSNYPAKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP 208
           + G  DS AVESTLTL SSN  AK C SKI RPIPMLPLSPYPKFAELNINER PEDPLP
Sbjct: 211 SGGADDSNAVESTLTLRSSNSEAKTCGSKISRPIPMLPLSPYPKFAELNINERTPEDPLP 270

Query: 209 LTLKLSTSQSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA 249
           LTLKLST  SEGQSPAAASQSSGSFQ MSGGGDSIDIVSVA
Sbjct: 271 LTLKLSTQHSEGQSPAAASQSSGSFQAMSGGGDSIDIVSVA 311

[Close]

BLAST of Cucsat.G9520.T2 vs. NCBI nr
Match: XP_022991605.1 (transcription factor MYB1R1-like [Cucurbita maxima])

HSP 1 Score: 328 bits (841), Expect = 7.56e-110
Identity = 174/221 (78.73%), Postives = 184/221 (83.26%), Query Frame = 0


Query: 29  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 88
           GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR
Sbjct: 92  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 151

Query: 89  SSLFDITTHTFTSSSKEDDLIFSGHEATQPPLPPSTPQKDNTPGNFSVKIHQAKPPPAAV 148
           SSLFDITT TFTSSS EDDL+FSGHEA QPPLPPS   KD+ PGNF +KIH  KPPPAA 
Sbjct: 152 SSLFDITTDTFTSSSMEDDLVFSGHEALQPPLPPSQLLKDSKPGNFLLKIHPVKPPPAAG 211

Query: 149 ASGVVDSKAVESTLTLNSSNYPAKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP 208
                D    E+T++            SKI+RPIPMLPLSPYPKFA+LNIN+R PEDPLP
Sbjct: 212 -----DDSNAENTIS------------SKILRPIPMLPLSPYPKFAQLNINDRTPEDPLP 271

Query: 209 LTLKLSTSQSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA 249
           LTLKLSTS  E QSP AASQSSG+FQTMSGGGDSIDIVSVA
Sbjct: 272 LTLKLSTSHPEAQSPTAASQSSGNFQTMSGGGDSIDIVSVA 295

[Close]

BLAST of Cucsat.G9520.T2 vs. NCBI nr
Match: XP_022956453.1 (transcription factor MYB1R1 [Cucurbita moschata])

HSP 1 Score: 325 bits (833), Expect = 1.37e-108
Identity = 174/222 (78.38%), Postives = 182/222 (81.98%), Query Frame = 0


Query: 29  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 88
           GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR
Sbjct: 95  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 154

Query: 89  SSLFDITTHTFTSSSKEDDLIFSGHEATQPPLPPSTPQKDNTPGNFSVKIHQAKP-PPAA 148
           SSLFDITT TF SSS EDDL+FSGHEA  PPLPPS P KDN PGNF +KIH  KP PPA 
Sbjct: 155 SSLFDITTDTFPSSSMEDDLVFSGHEALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAG 214

Query: 149 VASGVVDSKAVESTLTLNSSNYPAKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPL 208
                 D    E+T++            SKI+RPIPMLPLSPYPKFA+LNIN+R PEDPL
Sbjct: 215 ------DDSNAENTIS------------SKILRPIPMLPLSPYPKFAQLNINDRTPEDPL 274

Query: 209 PLTLKLSTSQSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA 249
           PLTLKLSTS  E QSP AASQSSGSFQTMSGGGDSIDIVSVA
Sbjct: 275 PLTLKLSTSHPEAQSPTAASQSSGSFQTMSGGGDSIDIVSVA 298

[Close]

BLAST of Cucsat.G9520.T2 vs. ExPASy TrEMBL
Match: A0A0A0KQE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604000 PE=4 SV=1)

HSP 1 Score: 434 bits (1116), Expect = 9.75e-152
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 29  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 88
           GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR
Sbjct: 92  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 151

Query: 89  SSLFDITTHTFTSSSKEDDLIFSGHEATQPPLPPSTPQKDNTPGNFSVKIHQAKPPPAAV 148
           SSLFDITTHTFTSSSKEDDLIFSGHEATQPPLPPSTPQKDNTPGNFSVKIHQAKPPPAAV
Sbjct: 152 SSLFDITTHTFTSSSKEDDLIFSGHEATQPPLPPSTPQKDNTPGNFSVKIHQAKPPPAAV 211

Query: 149 ASGVVDSKAVESTLTLNSSNYPAKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP 208
           ASGVVDSKAVESTLTLNSSNYPAKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP
Sbjct: 212 ASGVVDSKAVESTLTLNSSNYPAKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP 271

Query: 209 LTLKLSTSQSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA 249
           LTLKLSTSQSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA
Sbjct: 272 LTLKLSTSQSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA 312

[Close]

BLAST of Cucsat.G9520.T2 vs. ExPASy TrEMBL
Match: A0A5A7SYS1 (Transcription factor MYB1R1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00580 PE=4 SV=1)

HSP 1 Score: 392 bits (1008), Expect = 2.02e-135
Identity = 205/221 (92.76%), Postives = 206/221 (93.21%), Query Frame = 0


Query: 29  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 88
           GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR
Sbjct: 91  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 150

Query: 89  SSLFDITTHTFTSSSKEDDLIFSGHEATQPPLPPSTPQKDNTPGNFSVKIHQAKPPPAAV 148
           SSLFDITTHTFTSSSKED       EA QPPLPPS PQKDNTPGNFSVKIH AKPPPA+V
Sbjct: 151 SSLFDITTHTFTSSSKED-------EAMQPPLPPSPPQKDNTPGNFSVKIHAAKPPPASV 210

Query: 149 ASGVVDSKAVESTLTLNSSNYPAKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP 208
            SGVVDSKAV STLTLNSSNY  KPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP
Sbjct: 211 VSGVVDSKAVVSTLTLNSSNYRGKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP 270

Query: 209 LTLKLSTSQSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA 249
           LTLKLSTS SEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA
Sbjct: 271 LTLKLSTSHSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA 304

[Close]

BLAST of Cucsat.G9520.T2 vs. ExPASy TrEMBL
Match: A0A1S3BE68 (transcription factor MYB1R1 OS=Cucumis melo OX=3656 GN=LOC103489055 PE=4 SV=1)

HSP 1 Score: 392 bits (1008), Expect = 2.02e-135
Identity = 205/221 (92.76%), Postives = 206/221 (93.21%), Query Frame = 0


Query: 29  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 88
           GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR
Sbjct: 91  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 150

Query: 89  SSLFDITTHTFTSSSKEDDLIFSGHEATQPPLPPSTPQKDNTPGNFSVKIHQAKPPPAAV 148
           SSLFDITTHTFTSSSKED       EA QPPLPPS PQKDNTPGNFSVKIH AKPPPA+V
Sbjct: 151 SSLFDITTHTFTSSSKED-------EAMQPPLPPSPPQKDNTPGNFSVKIHAAKPPPASV 210

Query: 149 ASGVVDSKAVESTLTLNSSNYPAKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP 208
            SGVVDSKAV STLTLNSSNY  KPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP
Sbjct: 211 VSGVVDSKAVVSTLTLNSSNYRGKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP 270

Query: 209 LTLKLSTSQSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA 249
           LTLKLSTS SEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA
Sbjct: 271 LTLKLSTSHSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA 304

[Close]

BLAST of Cucsat.G9520.T2 vs. ExPASy TrEMBL
Match: A0A6J1JTE9 (transcription factor MYB1R1-like OS=Cucurbita maxima OX=3661 GN=LOC111488166 PE=4 SV=1)

HSP 1 Score: 328 bits (841), Expect = 3.66e-110
Identity = 174/221 (78.73%), Postives = 184/221 (83.26%), Query Frame = 0


Query: 29  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 88
           GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR
Sbjct: 92  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 151

Query: 89  SSLFDITTHTFTSSSKEDDLIFSGHEATQPPLPPSTPQKDNTPGNFSVKIHQAKPPPAAV 148
           SSLFDITT TFTSSS EDDL+FSGHEA QPPLPPS   KD+ PGNF +KIH  KPPPAA 
Sbjct: 152 SSLFDITTDTFTSSSMEDDLVFSGHEALQPPLPPSQLLKDSKPGNFLLKIHPVKPPPAAG 211

Query: 149 ASGVVDSKAVESTLTLNSSNYPAKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPLP 208
                D    E+T++            SKI+RPIPMLPLSPYPKFA+LNIN+R PEDPLP
Sbjct: 212 -----DDSNAENTIS------------SKILRPIPMLPLSPYPKFAQLNINDRTPEDPLP 271

Query: 209 LTLKLSTSQSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA 249
           LTLKLSTS  E QSP AASQSSG+FQTMSGGGDSIDIVSVA
Sbjct: 272 LTLKLSTSHPEAQSPTAASQSSGNFQTMSGGGDSIDIVSVA 295

[Close]

BLAST of Cucsat.G9520.T2 vs. ExPASy TrEMBL
Match: A0A6J1GWW1 (transcription factor MYB1R1 OS=Cucurbita moschata OX=3662 GN=LOC111458182 PE=4 SV=1)

HSP 1 Score: 325 bits (833), Expect = 6.65e-109
Identity = 174/222 (78.38%), Postives = 182/222 (81.98%), Query Frame = 0


Query: 29  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 88
           GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR
Sbjct: 95  GIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRR 154

Query: 89  SSLFDITTHTFTSSSKEDDLIFSGHEATQPPLPPSTPQKDNTPGNFSVKIHQAKP-PPAA 148
           SSLFDITT TF SSS EDDL+FSGHEA  PPLPPS P KDN PGNF +KIH  KP PPA 
Sbjct: 155 SSLFDITTDTFPSSSMEDDLVFSGHEALPPPLPPSQPLKDNKPGNFLLKIHPVKPLPPAG 214

Query: 149 VASGVVDSKAVESTLTLNSSNYPAKPCNSKIIRPIPMLPLSPYPKFAELNINERIPEDPL 208
                 D    E+T++            SKI+RPIPMLPLSPYPKFA+LNIN+R PEDPL
Sbjct: 215 ------DDSNAENTIS------------SKILRPIPMLPLSPYPKFAQLNINDRTPEDPL 274

Query: 209 PLTLKLSTSQSEGQSPAAASQSSGSFQTMSGGGDSIDIVSVA 249
           PLTLKLSTS  E QSP AASQSSGSFQTMSGGGDSIDIVSVA
Sbjct: 275 PLTLKLSTSHPEAQSPTAASQSSGSFQTMSGGGDSIDIVSVA 298

The following BLAST results are available for this feature:

BLAST of Cucsat.G9520.T2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V9B0	3.7e-33	44.59	Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9LVS0	3.6e-28	48.25	Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1	[more]
B8A9B2	2.6e-26	50.00	Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ...	[more]
Q8LH59	2.6e-26	50.00	Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=...	[more]
Q7XC57	3.4e-26	59.05	Transcription factor MYBS3 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS3 PE=...	[more]

BLAST of Cucsat.G9520.T2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135214.1	2.01e-151	100.00	transcription factor MYB1R1 [Cucumis sativus] >KGN51855.1 hypothetical protein C...	[more]
XP_008446280.1	4.17e-135	92.76	PREDICTED: transcription factor MYB1R1 [Cucumis melo] >KAA0034355.1 transcriptio...	[more]
XP_038891397.1	6.82e-131	88.69	transcription factor MYB1R1 [Benincasa hispida]	[more]
XP_022991605.1	7.56e-110	78.73	transcription factor MYB1R1-like [Cucurbita maxima]	[more]
XP_022956453.1	1.37e-108	78.38	transcription factor MYB1R1 [Cucurbita moschata]	[more]

BLAST of Cucsat.G9520.T2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQE3	9.75e-152	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604000 PE=4 SV=1	[more]
A0A5A7SYS1	2.02e-135	92.76	Transcription factor MYB1R1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BE68	2.02e-135	92.76	transcription factor MYB1R1 OS=Cucumis melo OX=3656 GN=LOC103489055 PE=4 SV=1	[more]
A0A6J1JTE9	3.66e-110	78.73	transcription factor MYB1R1-like OS=Cucurbita maxima OX=3661 GN=LOC111488166 PE=...	[more]
A0A6J1GWW1	6.65e-109	78.38	transcription factor MYB1R1 OS=Cucurbita moschata OX=3662 GN=LOC111458182 PE=4 S...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 28..78 e-value: 8.7E-9 score: 45.2
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 31..76 score: 7.154646
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 31..75 e-value: 6.67593E-10 score: 51.4222
None	No IPR available	GENE3D	1.10.10.60		coord: 30..82 e-value: 1.3E-14 score: 56.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..241
None	No IPR available	PANTHER	PTHR12374:SF69	KIN2	coord: 29..249
None	No IPR available	PANTHER	PTHR12374	TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED	coord: 29..249
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 30..78 e-value: 1.5E-16 score: 58.4
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 31..75 e-value: 1.2E-10 score: 41.4
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 31..80 score: 14.755382
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 32..80 score: 11.095315
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 30..81

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G9520	Cucsat.G9520	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9520.T2.E1	Cucsat.G9520.T2.E1	exon
Cucsat.G9520.T2.E2	Cucsat.G9520.T2.E2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9520.T2.C2	Cucsat.G9520.T2.C2	CDS
Cucsat.G9520.T2.C1	Cucsat.G9520.T2.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9520.T2	Cucsat.G9520.T2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009723	response to ethylene
biological_process	GO:0009733	response to auxin
biological_process	GO:0009739	response to gibberellin
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding