Cucsat.G9496.T2 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ACCCAAACAAACAAACAAACAAACATGAAATTCAACTACTCAATTTTCATATTCAATCTTCTCATTTTGCAACATCTATCAACCCTTTGCCTTTCTCAAGACTTCGATTTCTTCTACTTTGTTCAACAGGTATATTAATTAGATTAGTGTAAGCTTCATTATCAATTTGTAAAAATTAATTACTATATATTAATCTTGTAGTGGCCGGGAGCATATTGTGATACAAAGAGACAACATTGTTGCTATCCAGAAACAGGAAGGCCTGCTGCAGATTTTGGGATCCATGGTCTTTGGCCTAATTACAAAGATGGATCCTATCCATCCAATTGCGATCCCGATAGCGTTTTTGATCGAACTCAGGTAATGTAATTCAATTAATTAGCACAATATGCAACAAGTGATTATATATATATATGCTAGTAATTTAATTTATATGTTCATATTATTAGATCTCAGAAGTGTTAAGCAGCATGGACAAACACTGGCCATCGTTAAGTTGTCCAAGCAGCAATGGGCTAAGGTTTTGGTCACACGAGTGGGAGAAACACGGGACGTGTTCTGAGTCGGAACTCGACCAGAAGGAATATTTCGAAGCGGCTATTAAACTGAAGGAGAAGGCCAATCTCCTTAAGGTTCTTAATAGTGCAGGAATTGAAGCAAATGATGAGATGTATAGTTTAGAGAGTGTGAAAAATGCAATAGAAGAAGGGATTGGATTTACTCCTGGGATTGAATGTAACAGAGATTCAGCTGGGAATGCTCAACTTTACCAAGTTTATTTATGTGTTGATACTTCGGGTTCTGAGTTCATCAAATGCCCAATTCTTCCCAGGACTAAATGTGCTTCCACCATTCAATTCCCTAAGTTTTAATTTAATCACTTGTAATTTCATTCCCCTAATTATTGTTTATGTTCAGCTTTGATTGCTAATAAAATTAATTGATTACTTTGATT ATGGACAAACACTGGCCATCGTTAAGTTGTCCAAGCAGCAATGGGCTAAGGTTTTGGTCACACGAGTGGGAGAAACACGGGACGTGTTCTGAGTCGGAACTCGACCAGAAGGAATATTTCGAAGCGGCTATTAAACTGAAGGAGAAGGCCAATCTCCTTAAGGTTCTTAATAGTGCAGGAATTGAAGCAAATGATGAGATGTATAGTTTAGAGAGTGTGAAAAATGCAATAGAAGAAGGGATTGGATTTACTCCTGGGATTGAATGTAACAGAGATTCAGCTGGGAATGCTCAACTTTACCAAGTTTATTTATGTGTTGATACTTCGGGTTCTGAGTTCATCAAATGCCCAATTCTTCCCAGGACTAAATGTGCTTCCACCATTCAATTCCCTAAGTTTTAA MDKHWPSLSCPSSNGLRFWSHEWEKHGTCSESELDQKEYFEAAIKLKEKANLLKVLNSAGIEANDEMYSLESVKNAIEEGIGFTPGIECNRDSAGNAQLYQVYLCVDTSGSEFIKCPILPRTKCASTIQFPKF Homology
BLAST of Cucsat.G9496.T2 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 3.1e-50 Identity = 80/133 (60.15%), Postives = 112/133 (84.21%), Query Frame = 0
BLAST of Cucsat.G9496.T2 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 5.4e-47 Identity = 81/133 (60.90%), Postives = 102/133 (76.69%), Query Frame = 0
BLAST of Cucsat.G9496.T2 vs. ExPASy Swiss-Prot
Match: P80196 (Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2) HSP 1 Score: 174.9 bits (442), Expect = 6.2e-43 Identity = 84/135 (62.22%), Postives = 104/135 (77.04%), Query Frame = 0
BLAST of Cucsat.G9496.T2 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2) HSP 1 Score: 166.0 bits (419), Expect = 2.9e-40 Identity = 73/134 (54.48%), Postives = 99/134 (73.88%), Query Frame = 0
BLAST of Cucsat.G9496.T2 vs. ExPASy Swiss-Prot
Match: P83618 (Ribonuclease-like storage protein OS=Panax ginseng OX=4054 PE=1 SV=2) HSP 1 Score: 85.1 bits (209), Expect = 6.5e-16 Identity = 36/113 (31.86%), Postives = 66/113 (58.41%), Query Frame = 0
BLAST of Cucsat.G9496.T2 vs. NCBI nr
Match: XP_004135175.1 (ribonuclease 3 [Cucumis sativus]) HSP 1 Score: 276 bits (706), Expect = 2.62e-92 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Cucsat.G9496.T2 vs. NCBI nr
Match: KAE8648743.1 (hypothetical protein Csa_009374 [Cucumis sativus]) HSP 1 Score: 276 bits (706), Expect = 8.42e-90 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Cucsat.G9496.T2 vs. NCBI nr
Match: XP_008446356.1 (PREDICTED: ribonuclease 3-like [Cucumis melo] >KAA0034421.1 ribonuclease 3-like [Cucumis melo var. makuwa]) HSP 1 Score: 266 bits (681), Expect = 1.68e-88 Identity = 126/133 (94.74%), Postives = 131/133 (98.50%), Query Frame = 0
BLAST of Cucsat.G9496.T2 vs. NCBI nr
Match: XP_038893027.1 (ribonuclease 3-like [Benincasa hispida]) HSP 1 Score: 256 bits (655), Expect = 1.57e-84 Identity = 118/133 (88.72%), Postives = 130/133 (97.74%), Query Frame = 0
BLAST of Cucsat.G9496.T2 vs. NCBI nr
Match: XP_022151194.1 (ribonuclease 3-like [Momordica charantia]) HSP 1 Score: 246 bits (628), Expect = 1.89e-80 Identity = 113/133 (84.96%), Postives = 124/133 (93.23%), Query Frame = 0
BLAST of Cucsat.G9496.T2 vs. ExPASy TrEMBL
Match: A0A0A0KVY9 (Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_5G605150 PE=3 SV=1) HSP 1 Score: 276 bits (706), Expect = 1.27e-92 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Cucsat.G9496.T2 vs. ExPASy TrEMBL
Match: A0A5A7SY93 (Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G004270 PE=3 SV=1) HSP 1 Score: 266 bits (681), Expect = 8.11e-89 Identity = 126/133 (94.74%), Postives = 131/133 (98.50%), Query Frame = 0
BLAST of Cucsat.G9496.T2 vs. ExPASy TrEMBL
Match: A0A1S3BEW0 (Ribonuclease T(2) OS=Cucumis melo OX=3656 GN=LOC103489123 PE=3 SV=1) HSP 1 Score: 266 bits (681), Expect = 8.11e-89 Identity = 126/133 (94.74%), Postives = 131/133 (98.50%), Query Frame = 0
BLAST of Cucsat.G9496.T2 vs. ExPASy TrEMBL
Match: A0A6J1DCA6 (Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111019173 PE=3 SV=1) HSP 1 Score: 246 bits (628), Expect = 9.14e-81 Identity = 113/133 (84.96%), Postives = 124/133 (93.23%), Query Frame = 0
BLAST of Cucsat.G9496.T2 vs. ExPASy TrEMBL
Match: A0A6J1K2J7 (Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111489512 PE=3 SV=1) HSP 1 Score: 241 bits (616), Expect = 6.33e-79 Identity = 111/133 (83.46%), Postives = 124/133 (93.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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