Cucsat.G9436.T6 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G9436.T6
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	CTL-like protein DDB_G0274487
Location	ctg1673: 694769 .. 698852 (-)
RNA-Seq Expression	Cucsat.G9436.T6
Synteny	Cucsat.G9436.T6

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCTTTCACGCTGTTAGTCAGTGCGTGTCCTTTAAACTCTTTCATGAGTGGAAATTGAAGTGTCCCAAAGTGAATAACCCATATATTCCCTTTTCCGAATTTCACAGTGATTCTGTCCAAATTGTTCTGTTTCTCACTTCTTCTTTTTCTCTCTCAAATCTCCTCCACTTCCTGACGATTTTCAATTTCTCACACTTGTTTTCTGTAAAAGAAAGCCCTAAAAAAATCCACCCTTTCATCCTTCCTTTGTTCCTATCGTTTTCTTACCCACTTTTCACGTTCTTGTCAACCTCATTATGATTCACTCCATAACCTTCCAATCCTCAAACCCATGTTAGAAACAATGCTCCATAATTTTTTTCTCCATTCGTAATGGGGGACTCTGGTAGCGTCTCTTCTTCTTCCTTTGATTCCGTCTCCGTCGCTACCGCCGATCGAGCCCCGGTAAACCCCACTGATCTCTTTGCTTCTGTTCAATTTCTTGTTGTAGCTATCTTTTTCATGACTGGGTTTCGTTTACTGTTCATGATTACTTTTTGTGTGTGTGTGTGTGTGTTTTTATTCCTTTTTATTTGGGTTGATTACAGAATATAGTTCAGGGTCGTATGAGTGGTGATGGAGGCCAAGCGCTGTCGGATGAATCATCGCGTTCTTGGCGGGATATTTTCTGGTGCTTTGTGTTTATGCTTCATTTGATCAGTGTGGGATTCGTGCTTGTGGTTCTGGGGCTTAATAGGTTCAAGAAGAGCAATAGGTTACAAATTGATAAGTACACCAATACAATCATGGAGAATCGGGTTGGGTTAACAGAGGATTACTGGCCTCTTTATGCTTTGGCAGGTGGAGTGGGAAGCTTACTTGGATGGACTTGGTTGTTCTTGCTTGGTTCTTTTGCAAATCATGCAATGAAGATTTCTGTGCATATTTTGACTACATATCTTGCTGTGATAAGTGTTTTGTGCTTCTGGGGCCAGCTATTTTTCTGGGGTGTAACATTTTCAATTGGTGCGGGACTGCAGTTCCTGTATGTTATATCAGTTATAGACAGGTATGAGGTTGAATTTTGATGTTCTCGAACTTGATTTATTGTTGTGTTTCAGAAACCTTTTATTATTTCCTTATCTGAACTGTAAGAGTGAAAGTTCGGTTTTGTATATGTTAAGCAATATTTTTCTACATTTTGCCCTTGAATTCAACTCTTTGAGAATTAGAAATGTAGATGGACAAAAAATTGGACTAGGTGATTTTTGCAGTCTTTCTGACCTTGCATTTTTCCTTCTATAGACTACCATTTACACTTCTAGTGTTGCAAAAGGCTGTGAAGATGGTATCTGGGCTTCCTGAAGTTATTAGAGTTGCATATGTTTTCATGATTGTCATGCTTTTGTGTATGGGAATTTGGTCTTTTGGAGTGTCTGGTATTGTGGCATCGAGTATGGGTGATGGTGGACGCTGGTGGCTACTTGTGGTGAGCTGGCAAGTTTGCTCTTTTTTATGTTGCTTCATTTGAAGATGAAAAGTTTTACAGTTTGAAAGATCCAGGAATGTTGGCTGAATTTCTATGATATGCCATTTCTATTTGCAGGTTTTCTCCATAAGCTTGTTTTGGGCTGGTGCTGTTCTTTGTAATACTTTACATGTTATAGTTTCTGGAATGGTGTTTCTAGTCCTAATCCATGGCGGTAGAGAGTCATCGTCTATGCCATCAAAGTCGTTGATTAAGGCTTCTCGATATGCTGTGACAACATCTTTTGGTAGCATTTGCTATGGATCACTTTTTACAGCTGCCATTCGAACACTGCGGTGGGAGGTATTCGGTGCAAATTCTTTCTTTCCTACCACGCTGTGGATTGCCTTTCCTCTTTGGTTTGTATATTTATTTGTCAACTGAACCAATATCTTTCAGATCAGGGGAATCCGATCGAAGATTGGGAAGAACGAGTGTCTGCTCTGCTGTGTTGATTTTCTGTTTCATCTTGTTGAGACTCTTGTTCGTTTCTTTAACAAATATGCCTATGTCCAGGTTTCCCCTTTCATCTGATGTCAAGTTGAATAATTGAGTTTGACTTGTACTTTGAACTTTATGAATTACTAGTATGGTTTCCCCATTATTATAATATAATAGTTACCCCTGCCTTTCTTTGCTTCAGATAGCAGTTTACGGTAAAAGCTTCAACCGTTCAGCCAGGGATGCATGGGAGTTATTCCAGTCAACCGGAGTAGAAACTCTCGTTGCTTATGATTGTTCAGGTGCTGTTCTTCTGATGAGCACCGTCATGGGTGGGCTCACTGCTGGAACTTGCTCAGGTATTTGGACATGGATCAAATGGAAGGATAAGGTGTCAATGGTAGCATGTACTGCAACATTGATGGGGATGGTCCTGGTAAATATGTTTTTTAAAAAAGCTTATTCTTTTTACTTTTTGCAGGCTGATTCTAGTCTACAAATTTAGATTTCATAACCTCTTTCTTACAAATTTAGATTTCTTAGTTCTAAATTCTTCTGAATAAACTGTTCTTTGATTCTTTATTACTTGAAATTTTCAGGTAGGCCTTGCAATAGTGGTTGTGGAAAGTGCTGTTACGTCCATATACATTTGTTACGCAGAAAATCCGTTGTTGATTCAGAAATGGGATGCTGAATTCTTCAACCAGATTTCGGAGATGCTTCACCAGCGGCTTCAGCATCGGAGTGCACGAGCGAGGGAAGTGTTATCAGATTATCGGTTCGACAGCCGCAGAGAAGACCTAGTACAGGCATGAACTTCCTTACACATATTGATGCACAACCTCATTTGTTGACTCTTCACTTGAATAAAATATTTTTGTTTTGCGTTTTGGAGTTTTCTTTTGTTTTGGTAACAATCAATCAACTGTATAATAGTATAACATGATTAAATATATTGGTAACTTGTAATTTTTTACGTGCTGTTTTTTGGAATTTACTTTGGTTGTGAGCATATTTTGATATCGTTAGTGAGAATCGATGAAAGTCCAAAGAGAACAAGACCTTGTCGTTATTCATTTGGTAGCAGGATATGGGAATGTCAAAGGTACATACAACTTTTTAACACGTCAAATTACAAAAATATCCCTCAACTTTATGTTTTATTTTCTTTCAAATTCTACAATATTACCTTTGTCCATTCATATTTTTTCCTCAATTTCAGTAGAAGAAATCTATTAGAAGAAGGTCCTAAGAAAATTATAAGTGGCTTGAAACGAAAATTAAAATTCGAGCACTACCACAGTGGTTTCAAGTCTCAAGTCTCAATTTTCGTAGGATTCATATTATGAAAGGTTAGAAGGTATTGTTGTAGCTTTTGAAAAGGGATGTTTTTTATACCATGGACAAACTTGAGGGGTATTTTTTTGCAATTTATCCTTTTAAAAACAAGGATGGTCCTCGGTTTCGATGTTCTTTTGTCTGTGTTTCTCTTTTCTCTCATGCTTTCTCAACCTTCCTGCAAGACAAAACATAAGGTGATGTTATGTTATGTTAAATATTACCTTTATAATTACGAAACTCCAAAGTTAAAATAGGAACATACTGAAAACACAATATTTTTTGTATTTGACTGCTTGAGGAATGAAAACCCCCGTTCCATTCCCATTCTCCCATGAATTTACATGCCAAACAGGTTCATCAAAATCATTCCCATTTGGGCACAAACTCATATTTCTCTCTAGCTGTGGCCAACAATCTCTTTGTCGAACTTCTGCTCCTGGTTTGGCTGCAGTTTTGGGAAGCTGTTCGACCTCATCGTCATCATCATATGCTGTCAAAAGTAGACTGATCTGCTTCCTAATCTCAGCATAGTAACAATCTTCTTCTTCTGTTATTTGTGTGTTGAGCTCTGCTTTGAAATCCATGGTTATGGTGAAGTTAGACTAGACTGTATTTGGAATTTTATAGTGAAATGAGACCCAATGAAGTACTCTGCAGGGAAACAGAATTGTGAACAGATACATAGAGAAAAAGGGGGATTCATTTCAGTGTTATGTTTACACGGCTCCTGTCTAGATGTTAATTGCTTCATTAAATCATAAACTTGTAGATTAAGAACAACTCGCCAAGTGAAA

Coding sequence (CDS)

ATGGGGGACTCTGGTAGCGTCTCTTCTTCTTCCTTTGATTCCGTCTCCGTCGCTACCGCCGATCGAGCCCCGAATATAGTTCAGGGTCGTATGAGTGGTGATGGAGGCCAAGCGCTGTCGGATGAATCATCGCGTTCTTGGCGGGATATTTTCTGGTGCTTTGTGTTTATGCTTCATTTGATCAGTGTGGGATTCGTGCTTGTGGTTCTGGGGCTTAATAGGTTCAAGAAGAGCAATAGGTTACAAATTGATAAGTACACCAATACAATCATGGAGAATCGGGTTGGGTTAACAGAGGATTACTGGCCTCTTTATGCTTTGGCAGGTGGAGTGGGAAGCTTACTTGGATGGACTTGGTTGTTCTTGCTTGGTTCTTTTGCAAATCATGCAATGAAGATTTCTGTGCATATTTTGACTACATATCTTGCTGTGATAAGTGTTTTGTGCTTCTGGGGCCAGCTATTTTTCTGGGGTGTAACATTTTCAATTGGTGCGGGACTGCAGTTCCTGTATGTTATATCAGTTATAGACAGACTACCATTTACACTTCTAGTGTTGCAAAAGGCTGTGAAGATGGTATCTGGGCTTCCTGAAGTTATTAGAGTTGCATATGTTTTCATGATTGTCATGCTTTTGTGTATGGGAATTTGGTCTTTTGGAGTGTCTGGTATTGTGGCATCGAGTATGGGTGATGGTGGACGCTGGTGGCTACTTGTGGTGAGCTGGTTTTCTCCATAA

Protein sequence

MGDSGSVSSSSFDSVSVATADRAPNIVQGRMSGDGGQALSDESSRSWRDIFWCFVFMLHLISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWLFLLGSFANHAMKISVHILTTYLAVISVLCFWGQLFFWGVTFSIGAGLQFLYVISVIDRLPFTLLVLQKAVKMVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVSWFSP

Homology

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BLAST of Cucsat.G9436.T6 vs. NCBI nr
Match: XP_004135106.1 (CTL-like protein DDB_G0274487 [Cucumis sativus] >KGN52058.1 hypothetical protein Csa_009328 [Cucumis sativus])

HSP 1 Score: 466 bits (1198), Expect = 4.13e-161
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MGDSGSVSSSSFDSVSVATADRAPNIVQGRMSGDGGQALSDESSRSWRDIFWCFVFMLHL 60
           MGDSGSVSSSSFDSVSVATADRAPNIVQGRMSGDGGQALSDESSRSWRDIFWCFVFMLHL
Sbjct: 1   MGDSGSVSSSSFDSVSVATADRAPNIVQGRMSGDGGQALSDESSRSWRDIFWCFVFMLHL 60

Query: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL 120
           ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL
Sbjct: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL 120

Query: 121 FLLGSFANHAMKISVHILTTYLAVISVLCFWGQLFFWGVTFSIGAGLQFLYVISVIDRLP 180
           FLLGSFANHAMKISVHILTTYLAVISVLCFWGQLFFWGVTFSIGAGLQFLYVISVIDRLP
Sbjct: 121 FLLGSFANHAMKISVHILTTYLAVISVLCFWGQLFFWGVTFSIGAGLQFLYVISVIDRLP 180

Query: 181 FTLLVLQKAVKMVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV 240
           FTLLVLQKAVKMVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV
Sbjct: 181 FTLLVLQKAVKMVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV 240

[Close]

BLAST of Cucsat.G9436.T6 vs. NCBI nr
Match: XP_008446568.1 (PREDICTED: CTL-like protein DDB_G0274487 [Cucumis melo] >KAA0034536.1 CTL-like protein [Cucumis melo var. makuwa] >TYK09090.1 CTL-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 447 bits (1150), Expect = 8.25e-154
Identity = 231/240 (96.25%), Postives = 233/240 (97.08%), Query Frame = 0


Query: 1   MGDSGSVSSSSFDSVSVATADRAPNIVQGRMSGDGGQALSDESSRSWRDIFWCFVFMLHL 60
           MGDSGSVSSSSFDSVSVATAD+A NIVQGRMSGDGGQAL DESSRSWRDIFWCFVFM+HL
Sbjct: 1   MGDSGSVSSSSFDSVSVATADQAQNIVQGRMSGDGGQALPDESSRSWRDIFWCFVFMIHL 60

Query: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL 120
           ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENR GLTEDYWPLYALAGGVGSLLGWTWL
Sbjct: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRDGLTEDYWPLYALAGGVGSLLGWTWL 120

Query: 121 FLLGSFANHAMKISVHILTTYLAVISVLCFWGQLFFWGVTFSIGAGLQFLYVISVIDRLP 180
           FLLGSFANH MKISVHILTTYLAVISVLCFWGQLFFWGV FSI AGLQFLYVISVIDRLP
Sbjct: 121 FLLGSFANHVMKISVHILTTYLAVISVLCFWGQLFFWGVAFSIVAGLQFLYVISVIDRLP 180

Query: 181 FTLLVLQKAVKMVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV 240
           FTLLVLQKAVKMVSGLPEVIRVAY FMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV
Sbjct: 181 FTLLVLQKAVKMVSGLPEVIRVAYAFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV 240

[Close]

BLAST of Cucsat.G9436.T6 vs. NCBI nr
Match: XP_038891301.1 (CTL-like protein DDB_G0274487 [Benincasa hispida])

HSP 1 Score: 442 bits (1138), Expect = 5.28e-152
Identity = 225/240 (93.75%), Postives = 231/240 (96.25%), Query Frame = 0


Query: 1   MGDSGSVSSSSFDSVSVATADRAPNIVQGRMSGDGGQALSDESSRSWRDIFWCFVFMLHL 60
           MGDSGSVSSSSFDS SV TAD+A N+ QGRMSGDGGQALSDESSRSWRD+FW FVFM+HL
Sbjct: 1   MGDSGSVSSSSFDSASVVTADQAQNVAQGRMSGDGGQALSDESSRSWRDVFWSFVFMIHL 60

Query: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL 120
           ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGW WL
Sbjct: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWAWL 120

Query: 121 FLLGSFANHAMKISVHILTTYLAVISVLCFWGQLFFWGVTFSIGAGLQFLYVISVIDRLP 180
           FLLGSFANH MKISVHILTTYLAVISVLCFWGQLFFWGV FSIGAGLQFLYV+SVIDRLP
Sbjct: 121 FLLGSFANHVMKISVHILTTYLAVISVLCFWGQLFFWGVAFSIGAGLQFLYVVSVIDRLP 180

Query: 181 FTLLVLQKAVKMVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV 240
           FTLLVLQKAVKMVSGLPEVIRVAY FMIVMLLCMGIWSFGV+GIVASSMGDGGRWWLLVV
Sbjct: 181 FTLLVLQKAVKMVSGLPEVIRVAYAFMIVMLLCMGIWSFGVAGIVASSMGDGGRWWLLVV 240

[Close]

BLAST of Cucsat.G9436.T6 vs. NCBI nr
Match: KAG7032092.1 (hypothetical protein SDJN02_06135 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 434 bits (1116), Expect = 1.31e-148
Identity = 221/241 (91.70%), Postives = 230/241 (95.44%), Query Frame = 0


Query: 1   MGDSGSVSSSSFDSVSVATADRAPNIVQGRMSGDGGQALSDESSRSWRDIFWCFVFMLHL 60
           M DSGSVSSSSFDS S+AT D+  N V+GRMSG GGQALSDESSRSWRD+FW FVF++HL
Sbjct: 1   MADSGSVSSSSFDSASIATVDQVQNAVRGRMSGVGGQALSDESSRSWRDVFWSFVFIIHL 60

Query: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL 120
           ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL
Sbjct: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL 120

Query: 121 FLLGSFANHAMKISVHILTTYLAVISVLCFWGQLFFWGVTFSIGAGLQFLYVISVIDRLP 180
           FLLGSFANH MKISVHILTTYLAVISVLCFWGQLFFWGV FSIGAGLQFLYVISVIDRLP
Sbjct: 121 FLLGSFANHVMKISVHILTTYLAVISVLCFWGQLFFWGVAFSIGAGLQFLYVISVIDRLP 180

Query: 181 FTLLVLQKAVKMVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV 240
           FTLLVLQKAVKMVSGLPEVI+VAY FMIVMLLCMG+WSFGV+GIVASSMGDGGRWWLLVV
Sbjct: 181 FTLLVLQKAVKMVSGLPEVIKVAYAFMIVMLLCMGVWSFGVAGIVASSMGDGGRWWLLVV 240

[Close]

BLAST of Cucsat.G9436.T6 vs. NCBI nr
Match: XP_022957507.1 (CTL-like protein DDB_G0274487 isoform X1 [Cucurbita moschata] >KAG6601307.1 CTL-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 432 bits (1112), Expect = 4.64e-148
Identity = 220/240 (91.67%), Postives = 229/240 (95.42%), Query Frame = 0


Query: 1   MGDSGSVSSSSFDSVSVATADRAPNIVQGRMSGDGGQALSDESSRSWRDIFWCFVFMLHL 60
           M DSGSVSSSSFDS S+AT D+  N V+GRMSG GGQALSDESSRSWRD+FW FVF++HL
Sbjct: 1   MADSGSVSSSSFDSASIATVDQVQNAVRGRMSGVGGQALSDESSRSWRDVFWSFVFIIHL 60

Query: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL 120
           ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL
Sbjct: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL 120

Query: 121 FLLGSFANHAMKISVHILTTYLAVISVLCFWGQLFFWGVTFSIGAGLQFLYVISVIDRLP 180
           FLLGSFANH MKISVHILTTYLAVISVLCFWGQLFFWGV FSIGAGLQFLYVISVIDRLP
Sbjct: 121 FLLGSFANHVMKISVHILTTYLAVISVLCFWGQLFFWGVAFSIGAGLQFLYVISVIDRLP 180

Query: 181 FTLLVLQKAVKMVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV 240
           FTLLVLQKAVKMVSGLPEVI+VAY FMIVMLLCMG+WSFGV+GIVASSMGDGGRWWLLVV
Sbjct: 181 FTLLVLQKAVKMVSGLPEVIKVAYAFMIVMLLCMGVWSFGVAGIVASSMGDGGRWWLLVV 240

[Close]

BLAST of Cucsat.G9436.T6 vs. ExPASy TrEMBL
Match: A0A0A0KR48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608460 PE=3 SV=1)

HSP 1 Score: 466 bits (1198), Expect = 2.00e-161
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MGDSGSVSSSSFDSVSVATADRAPNIVQGRMSGDGGQALSDESSRSWRDIFWCFVFMLHL 60
           MGDSGSVSSSSFDSVSVATADRAPNIVQGRMSGDGGQALSDESSRSWRDIFWCFVFMLHL
Sbjct: 1   MGDSGSVSSSSFDSVSVATADRAPNIVQGRMSGDGGQALSDESSRSWRDIFWCFVFMLHL 60

Query: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL 120
           ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL
Sbjct: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL 120

Query: 121 FLLGSFANHAMKISVHILTTYLAVISVLCFWGQLFFWGVTFSIGAGLQFLYVISVIDRLP 180
           FLLGSFANHAMKISVHILTTYLAVISVLCFWGQLFFWGVTFSIGAGLQFLYVISVIDRLP
Sbjct: 121 FLLGSFANHAMKISVHILTTYLAVISVLCFWGQLFFWGVTFSIGAGLQFLYVISVIDRLP 180

Query: 181 FTLLVLQKAVKMVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV 240
           FTLLVLQKAVKMVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV
Sbjct: 181 FTLLVLQKAVKMVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV 240

[Close]

BLAST of Cucsat.G9436.T6 vs. ExPASy TrEMBL
Match: A0A5A7SXE5 (CTL-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00800 PE=3 SV=1)

HSP 1 Score: 447 bits (1150), Expect = 3.99e-154
Identity = 231/240 (96.25%), Postives = 233/240 (97.08%), Query Frame = 0


Query: 1   MGDSGSVSSSSFDSVSVATADRAPNIVQGRMSGDGGQALSDESSRSWRDIFWCFVFMLHL 60
           MGDSGSVSSSSFDSVSVATAD+A NIVQGRMSGDGGQAL DESSRSWRDIFWCFVFM+HL
Sbjct: 1   MGDSGSVSSSSFDSVSVATADQAQNIVQGRMSGDGGQALPDESSRSWRDIFWCFVFMIHL 60

Query: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL 120
           ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENR GLTEDYWPLYALAGGVGSLLGWTWL
Sbjct: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRDGLTEDYWPLYALAGGVGSLLGWTWL 120

Query: 121 FLLGSFANHAMKISVHILTTYLAVISVLCFWGQLFFWGVTFSIGAGLQFLYVISVIDRLP 180
           FLLGSFANH MKISVHILTTYLAVISVLCFWGQLFFWGV FSI AGLQFLYVISVIDRLP
Sbjct: 121 FLLGSFANHVMKISVHILTTYLAVISVLCFWGQLFFWGVAFSIVAGLQFLYVISVIDRLP 180

Query: 181 FTLLVLQKAVKMVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV 240
           FTLLVLQKAVKMVSGLPEVIRVAY FMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV
Sbjct: 181 FTLLVLQKAVKMVSGLPEVIRVAYAFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV 240

[Close]

BLAST of Cucsat.G9436.T6 vs. ExPASy TrEMBL
Match: A0A1S3BFC7 (CTL-like protein DDB_G0274487 OS=Cucumis melo OX=3656 GN=LOC103489263 PE=3 SV=1)

HSP 1 Score: 447 bits (1150), Expect = 3.99e-154
Identity = 231/240 (96.25%), Postives = 233/240 (97.08%), Query Frame = 0


Query: 1   MGDSGSVSSSSFDSVSVATADRAPNIVQGRMSGDGGQALSDESSRSWRDIFWCFVFMLHL 60
           MGDSGSVSSSSFDSVSVATAD+A NIVQGRMSGDGGQAL DESSRSWRDIFWCFVFM+HL
Sbjct: 1   MGDSGSVSSSSFDSVSVATADQAQNIVQGRMSGDGGQALPDESSRSWRDIFWCFVFMIHL 60

Query: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL 120
           ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENR GLTEDYWPLYALAGGVGSLLGWTWL
Sbjct: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRDGLTEDYWPLYALAGGVGSLLGWTWL 120

Query: 121 FLLGSFANHAMKISVHILTTYLAVISVLCFWGQLFFWGVTFSIGAGLQFLYVISVIDRLP 180
           FLLGSFANH MKISVHILTTYLAVISVLCFWGQLFFWGV FSI AGLQFLYVISVIDRLP
Sbjct: 121 FLLGSFANHVMKISVHILTTYLAVISVLCFWGQLFFWGVAFSIVAGLQFLYVISVIDRLP 180

Query: 181 FTLLVLQKAVKMVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV 240
           FTLLVLQKAVKMVSGLPEVIRVAY FMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV
Sbjct: 181 FTLLVLQKAVKMVSGLPEVIRVAYAFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV 240

[Close]

BLAST of Cucsat.G9436.T6 vs. ExPASy TrEMBL
Match: A0A6J1GZB3 (CTL-like protein DDB_G0274487 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458882 PE=3 SV=1)

HSP 1 Score: 432 bits (1112), Expect = 2.25e-148
Identity = 220/240 (91.67%), Postives = 229/240 (95.42%), Query Frame = 0


Query: 1   MGDSGSVSSSSFDSVSVATADRAPNIVQGRMSGDGGQALSDESSRSWRDIFWCFVFMLHL 60
           M DSGSVSSSSFDS S+AT D+  N V+GRMSG GGQALSDESSRSWRD+FW FVF++HL
Sbjct: 1   MADSGSVSSSSFDSASIATVDQVQNAVRGRMSGVGGQALSDESSRSWRDVFWSFVFIIHL 60

Query: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL 120
           ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL
Sbjct: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL 120

Query: 121 FLLGSFANHAMKISVHILTTYLAVISVLCFWGQLFFWGVTFSIGAGLQFLYVISVIDRLP 180
           FLLGSFANH MKISVHILTTYLAVISVLCFWGQLFFWGV FSIGAGLQFLYVISVIDRLP
Sbjct: 121 FLLGSFANHVMKISVHILTTYLAVISVLCFWGQLFFWGVAFSIGAGLQFLYVISVIDRLP 180

Query: 181 FTLLVLQKAVKMVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV 240
           FTLLVLQKAVKMVSGLPEVI+VAY FMIVMLLCMG+WSFGV+GIVASSMGDGGRWWLLVV
Sbjct: 181 FTLLVLQKAVKMVSGLPEVIKVAYAFMIVMLLCMGVWSFGVAGIVASSMGDGGRWWLLVV 240

[Close]

BLAST of Cucsat.G9436.T6 vs. ExPASy TrEMBL
Match: A0A6J1H0E9 (CTL-like protein DDB_G0274487 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458882 PE=3 SV=1)

HSP 1 Score: 428 bits (1100), Expect = 1.39e-146
Identity = 220/240 (91.67%), Postives = 229/240 (95.42%), Query Frame = 0


Query: 1   MGDSGSVSSSSFDSVSVATADRAPNIVQGRMSGDGGQALSDESSRSWRDIFWCFVFMLHL 60
           M DSGSVSSSSFDS S+AT D+  N V+GRMSG GGQALSDESSRSWRD+FW FVF++HL
Sbjct: 1   MADSGSVSSSSFDSASIATVDQ--NAVRGRMSGVGGQALSDESSRSWRDVFWSFVFIIHL 60

Query: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL 120
           ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL
Sbjct: 61  ISVGFVLVVLGLNRFKKSNRLQIDKYTNTIMENRVGLTEDYWPLYALAGGVGSLLGWTWL 120

Query: 121 FLLGSFANHAMKISVHILTTYLAVISVLCFWGQLFFWGVTFSIGAGLQFLYVISVIDRLP 180
           FLLGSFANH MKISVHILTTYLAVISVLCFWGQLFFWGV FSIGAGLQFLYVISVIDRLP
Sbjct: 121 FLLGSFANHVMKISVHILTTYLAVISVLCFWGQLFFWGVAFSIGAGLQFLYVISVIDRLP 180

Query: 181 FTLLVLQKAVKMVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVV 240
           FTLLVLQKAVKMVSGLPEVI+VAY FMIVMLLCMG+WSFGV+GIVASSMGDGGRWWLLVV
Sbjct: 181 FTLLVLQKAVKMVSGLPEVIKVAYAFMIVMLLCMGVWSFGVAGIVASSMGDGGRWWLLVV 238

The following BLAST results are available for this feature:

BLAST of Cucsat.G9436.T6 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G9436.T6 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135106.1	4.13e-161	100.00	CTL-like protein DDB_G0274487 [Cucumis sativus] >KGN52058.1 hypothetical protein...	[more]
XP_008446568.1	8.25e-154	96.25	PREDICTED: CTL-like protein DDB_G0274487 [Cucumis melo] >KAA0034536.1 CTL-like p...	[more]
XP_038891301.1	5.28e-152	93.75	CTL-like protein DDB_G0274487 [Benincasa hispida]	[more]
KAG7032092.1	1.31e-148	91.70	hypothetical protein SDJN02_06135 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022957507.1	4.64e-148	91.67	CTL-like protein DDB_G0274487 isoform X1 [Cucurbita moschata] >KAG6601307.1 CTL-...	[more]

BLAST of Cucsat.G9436.T6 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR48	2.00e-161	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608460 PE=3 SV=1	[more]
A0A5A7SXE5	3.99e-154	96.25	CTL-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G008...	[more]
A0A1S3BFC7	3.99e-154	96.25	CTL-like protein DDB_G0274487 OS=Cucumis melo OX=3656 GN=LOC103489263 PE=3 SV=1	[more]
A0A6J1GZB3	2.25e-148	91.67	CTL-like protein DDB_G0274487 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1H0E9	1.39e-146	91.67	CTL-like protein DDB_G0274487 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007603	Choline transporter-like	PFAM	PF04515	Choline_transpo	coord: 160..231 e-value: 1.4E-6 score: 27.8
IPR007603	Choline transporter-like	PANTHER	PTHR12385	CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)	coord: 35..241
None	No IPR available	PANTHER	PTHR12385:SF87	PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN-RELATED	coord: 35..241

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G9436	Cucsat.G9436	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9436.T6.E1	Cucsat.G9436.T6.E1	exon
Cucsat.G9436.T6.E2	Cucsat.G9436.T6.E2	exon
Cucsat.G9436.T6.E3	Cucsat.G9436.T6.E3	exon
Cucsat.G9436.T6.E4	Cucsat.G9436.T6.E4	exon
Cucsat.G9436.T6.E5	Cucsat.G9436.T6.E5	exon
Cucsat.G9436.T6.E6	Cucsat.G9436.T6.E6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9436.T6.C4	Cucsat.G9436.T6.C4	CDS
Cucsat.G9436.T6.C3	Cucsat.G9436.T6.C3	CDS
Cucsat.G9436.T6.C2	Cucsat.G9436.T6.C2	CDS
Cucsat.G9436.T6.C1	Cucsat.G9436.T6.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9436.T6	Cucsat.G9436.T6-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity