Cucsat.G9436.T17 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G9436.T17
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	CTL-like protein DDB_G0274487
Location	ctg1673: 694769 .. 698829 (-)
RNA-Seq Expression	Cucsat.G9436.T17
Synteny	Cucsat.G9436.T17

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGTGTCCTTTAAACTCTTTCATGAGTGGAAATTGAAGTGTCCCAAAGTGAATAACCCATATATTCCCTTTTCCGAATTTCACAGTGATTCTGTCCAAATTGTTCTGTTTCTCACTTCTTCTTTTTCTCTCTCAAATCTCCTCCACTTCCTGACGATTTTCAATTTCTCACACTTGTTTTCTGTAAAAGAAAGCCCTAAAAAAATCCACCCTTTCATCCTTCCTTTGTTCCTATCGTTTTCTTACCCACTTTTCACGTTCTTGTCAACCTCATTATGATTCACTCCATAACCTTCCAATCCTCAAACCCATGTTAGAAACAATGCTCCATAATTTTTTTCTCCATTCGTAATGGGGGACTCTGGTAGCGTCTCTTCTTCTTCCTTTGATTCCGTCTCCGTCGCTACCGCCGATCGAGCCCCGGTAAACCCCACTGATCTCTTTGCTTCTGTTCAATTTCTTGTTGTAGCTATCTTTTTCATGACTGGGTTTCGTTTACTGTTCATGATTACTTTTTGTGTGTGTGTGTGTGTGTTTTTATTCCTTTTTATTTGGGTTGATTACAGAATATAGTTCAGGGTCGTATGAGTGGTGATGGAGGCCAAGCGCTGTCGGATGAATCATCGCGTTCTTGGCGGGATATTTTCTGGTGCTTTGTGTTTATGCTTCATTTGATCAGTGTGGGATTCGTGCTTGTGGTTCTGGGGCTTAATAGGTTCAAGAAGAGCAATAGGTTACAAATTGATAAGTACACCAATACAATCATGGAGAATCGGGTTGGGTTAACAGAGGATTACTGGCCTCTTTATGCTTTGGCAGGTGGAGTGGGAAGCTTACTTGGATGGACTTGGTTGTTCTTGCTTGGTTCTTTTGCAAATCATGCAATGAAGATTTCTGTGCATATTTTGACTACATATCTTGCTGTGATAAGTGTTTTGTGCTTCTGGGGCCAGCTATTTTTCTGGGGTGTAACATTTTCAATTGGTGCGGGACTGCAGTTCCTGTATGTTATATCAGTTATAGACAGGTATGAGGTTGAATTTTGATGTTCTCGAACTTGATTTATTGTTGTGTTTCAGAAACCTTTTATTATTTCCTTATCTGAACTGTAAGAGTGAAAGTTCGGTTTTGTATATGTTAAGCAATATTTTTCTACATTTTGCCCTTGAATTCAACTCTTTGAGAATTAGAAATGTAGATGGACAAAAAATTGGACTAGGTGATTTTTGCAGTCTTTCTGACCTTGCATTTTTCCTTCTATAGACTACCATTTACACTTCTAGTGTTGCAAAAGGCTGTGAAGATGGTATCTGGGCTTCCTGAAGTTATTAGAGTTGCATATGTTTTCATGATTGTCATGCTTTTGTGTATGGGAATTTGGTCTTTTGGAGTGTCTGGTATTGTGGCATCGAGTATGGGTGATGGTGGACGCTGGTGGCTACTTGTGGTGAGCTGGCAAGTTTGCTCTTTTTTATGTTGCTTCATTTGAAGATGAAAAGTTTTACAGTTTGAAAGATCCAGGAATGTTGGCTGAATTTCTATGATATGCCATTTCTATTTGCAGGTTTTCTCCATAAGCTTGTTTTGGGCTGGTGCTGTTCTTTGTAATACTTTACATGTTATAGTTTCTGGAATGGTGTTTCTAGTCCTAATCCATGGCGGTAGAGAGTCATCGTCTATGCCATCAAAGTCGTTGATTAAGGCTTCTCGATATGCTGTGACAACATCTTTTGGTAGCATTTGCTATGGATCACTTTTTACAGCTGCCATTCGAACACTGCGGTGGGAGGTATTCGGTGCAAATTCTTTCTTTCCTACCACGCTGTGGATTGCCTTTCCTCTTTGGTTTGTATATTTATTTGTCAACTGAACCAATATCTTTCAGATCAGGGGAATCCGATCGAAGATTGGGAAGAACGAGTGTCTGCTCTGCTGTGTTGATTTTCTGTTTCATCTTGTTGAGACTCTTGTTCGTTTCTTTAACAAATATGCCTATGTCCAGGTTTCCCCTTTCATCTGATGTCAAGTTGAATAATTGAGTTTGACTTGTACTTTGAACTTTATGAATTACTAGTATGGTTTCCCCATTATTATAATATAATAGTTACCCCTGCCTTTCTTTGCTTCAGATAGCAGTTTACGGTAAAAGCTTCAACCGTTCAGCCAGGGATGCATGGGAGTTATTCCAGTCAACCGGAGTAGAAACTCTCGTTGCTTATGATTGTTCAGGTGCTGTTCTTCTGATGAGCACCGTCATGGGTGGGCTCACTGCTGGAACTTGCTCAGGTATTTGGACATGGATCAAATGGAAGGATAAGGTGTCAATGGTAGCATGTACTGCAACATTGATGGGGATGGTCCTGGTAAATATGTTTTTTAAAAAAGCTTATTCTTTTTACTTTTTGCAGGCTGATTCTAGTCTACAAATTTAGATTTCATAACCTCTTTCTTACAAATTTAGATTTCTTAGTTCTAAATTCTTCTGAATAAACTGTTCTTTGATTCTTTATTACTTGAAATTTTCAGGTAGGCCTTGCAATAGTGGTTGTGGAAAGTGCTGTTACGTCCATATACATTTGTTACGCAGAAAATCCGTTGTTGATTCAGAAATGGGATGCTGAATTCTTCAACCAGATTTCGGAGATGCTTCACCAGCGGCTTCAGCATCGGAGTGCACGAGCGAGGGAAGTGTTATCAGATTATCGGTTCGACAGCCGCAGAGAAGACCTAGTACAGGCATGAACTTCCTTACACATATTGATGCACAACCTCATTTGTTGACTCTTCACTTGAATAAAATATTTTTGTTTTGCGTTTTGGAGTTTTCTTTTGTTTTGGTAACAATCAATCAACTGTATAATAGTATAACATGATTAAATATATTGGTAACTTGTAATTTTTTACGTGCTGTTTTTTGGAATTTACTTTGGTTGTGAGCATATTTTGATATCGTTAGTGAGAATCGATGAAAGTCCAAAGAGAACAAGACCTTGTCGTTATTCATTTGGTAGCAGGATATGGGAATGTCAAAGGTACATACAACTTTTTAACACGTCAAATTACAAAAATATCCCTCAACTTTATGTTTTATTTTCTTTCAAATTCTACAATATTACCTTTGTCCATTCATATTTTTTCCTCAATTTCAGTAGAAGAAATCTATTAGAAGAAGGTCCTAAGAAAATTATAAGTGGCTTGAAACGAAAATTAAAATTCGAGCACTACCACAGTGGTTTCAAGTCTCAAGTCTCAATTTTCGTAGGATTCATATTATGAAAGGTTAGAAGGTATTGTTGTAGCTTTTGAAAAGGGATGTTTTTTATACCATGGACAAACTTGAGGGGTATTTTTTTGCAATTTATCCTTTTAAAAACAAGGATGGTCCTCGGTTTCGATGTTCTTTTGTCTGTGTTTCTCTTTTCTCTCATGCTTTCTCAACCTTCCTGCAAGACAAAACATAAGGTGATGTTATGTTATGTTAAATATTACCTTTATAATTACGAAACTCCAAAGTTAAAATAGGAACATACTGAAAACACAATATTTTTTGTATTTGACTGCTTGAGGAATGAAAACCCCCGTTCCATTCCCATTCTCCCATGAATTTACATGCCAAACAGGTTCATCAAAATCATTCCCATTTGGGCACAAACTCATATTTCTCTCTAGCTGTGGCCAACAATCTCTTTGTCGAACTTCTGCTCCTGGTTTGGCTGCAGTTTTGGGAAGCTGTTCGACCTCATCGTCATCATCATATGCTGTCAAAAGTAGACTGATCTGCTTCCTAATCTCAGCATAGTAACAATCTTCTTCTTCTGTTATTTGTGTGTTGAGCTCTGCTTTGAAATCCATGGTTATGGTGAAGTTAGACTAGACTGTATTTGGAATTTTATAGTGAAATGAGACCCAATGAAGTACTCTGCAGGGAAACAGAATTGTGAACAGATACATAGAGAAAAAGGGGGATTCATTTCAGTGTTATGTTTACACGGCTCCTGTCTAGATGTTAATTGCTTCATTAAATCATAAACTTGTAGATTAAGAACAACTCGCCAAGTGAAA

Coding sequence (CDS)

ATGGTATCTGGGCTTCCTGAAGTTATTAGAGTTGCATATGTTTTCATGATTGTCATGCTTTTGTGTATGGGAATTTGGTCTTTTGGAGTGTCTGGTATTGTGGCATCGAGTATGGGTGATGGTGGACGCTGGTGGCTACTTGTGGTTTTCTCCATAAGCTTGTTTTGGGCTGGTGCTGTTCTTTGTAATACTTTACATGTTATAGTTTCTGGAATGGTGTTTCTAGTCCTAATCCATGGCGGTAGAGAGTCATCGTCTATGCCATCAAAGTCGTTGATTAAGGCTTCTCGATATGCTGTGACAACATCTTTTGGTAGCATTTGCTATGGATCACTTTTTACAGCTGCCATTCGAACACTGCGGTGGGAGGTATTCGGTGCAAATTCTTTCTTTCCTACCACGCTGTGGATTGCCTTTCCTCTTTGGTTTGTATATTTATTTGTCAACTGA

Protein sequence

MVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAVLCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLIKASRYAVTTSFGSICYGSLFTAAIRTLRWEVFGANSFFPTTLWIAFPLWFVYLFVN

Homology

[Close]

BLAST of Cucsat.G9436.T17 vs. ExPASy Swiss-Prot
Match: Q869R1 (CTL-like protein DDB_G0274487 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0274487 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.1e-07
Identity = 38/122 (31.15%), Postives = 61/122 (50.00%), Query Frame = 0


Query: 1   MVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV 60
           ++   P VIR  YV + +  +   +W    + +     G   +  + +    +L+W   V
Sbjct: 274 IIKEYPSVIRAGYVSIFINFVWFIVWGSAFARVNMVYTG-AIQTCINIYLVFTLYWVFHV 333

Query: 61  LCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLIKASRYAVTTSFGSICYGSLFTAAIRTL 120
           + NTLH  VSG++       G     MP    + ++R A+TTSFGSIC+GSL  + I TL
Sbjct: 334 IKNTLHTTVSGLLATWYFCSGPNGVGMPHNPTLGSARRALTTSFGSICFGSLIISLIETL 393

Query: 121 RW 123
           R+
Sbjct: 394 RY 394

[Close]

BLAST of Cucsat.G9436.T17 vs. NCBI nr
Match: XP_004135106.1 (CTL-like protein DDB_G0274487 [Cucumis sativus] >KGN52058.1 hypothetical protein Csa_009328 [Cucumis sativus])

HSP 1 Score: 244 bits (622), Expect = 9.14e-76
Identity = 125/129 (96.90%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 1   MVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV 60
           MVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV
Sbjct: 192 MVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV 251

Query: 61  LCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLIKASRYAVTTSFGSICYGSLFTAAIRTL 120
           LCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLIKASRYAVTTSFGSICYGSLFTAAIRTL
Sbjct: 252 LCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLIKASRYAVTTSFGSICYGSLFTAAIRTL 311

Query: 121 RWEVFGANS 129
           RWE+ G  S
Sbjct: 312 RWEIRGIRS 320

[Close]

BLAST of Cucsat.G9436.T17 vs. NCBI nr
Match: XP_008446568.1 (PREDICTED: CTL-like protein DDB_G0274487 [Cucumis melo] >KAA0034536.1 CTL-like protein [Cucumis melo var. makuwa] >TYK09090.1 CTL-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 239 bits (611), Expect = 4.15e-74
Identity = 122/129 (94.57%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV 60
           MVSGLPEVIRVAY FMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV
Sbjct: 192 MVSGLPEVIRVAYAFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV 251

Query: 61  LCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLIKASRYAVTTSFGSICYGSLFTAAIRTL 120
            CNTLHVIVSGMVFLVLIHGGRESSSMPSKSL+KASRYAVTTSFGSICYGSLFTAAIRTL
Sbjct: 252 FCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLMKASRYAVTTSFGSICYGSLFTAAIRTL 311

Query: 121 RWEVFGANS 129
           RWE+ G  S
Sbjct: 312 RWEIRGIRS 320

[Close]

BLAST of Cucsat.G9436.T17 vs. NCBI nr
Match: XP_038891301.1 (CTL-like protein DDB_G0274487 [Benincasa hispida])

HSP 1 Score: 239 bits (610), Expect = 5.71e-74
Identity = 121/129 (93.80%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV 60
           MVSGLPEVIRVAY FMIVMLLCMGIWSFGV+GIVASSMGDGGRWWLLVVFSISLFWAGAV
Sbjct: 192 MVSGLPEVIRVAYAFMIVMLLCMGIWSFGVAGIVASSMGDGGRWWLLVVFSISLFWAGAV 251

Query: 61  LCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLIKASRYAVTTSFGSICYGSLFTAAIRTL 120
            CNTLHVIVSGMVFLVLIHGGRESSSMPSKSL+KASRYAVTTSFGSICYGSLFTAAIRTL
Sbjct: 252 FCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLVKASRYAVTTSFGSICYGSLFTAAIRTL 311

Query: 121 RWEVFGANS 129
           RWE+ G  S
Sbjct: 312 RWEIRGIRS 320

[Close]

BLAST of Cucsat.G9436.T17 vs. NCBI nr
Match: XP_022977383.1 (CTL-like protein DDB_G0274487 isoform X2 [Cucurbita maxima])

HSP 1 Score: 233 bits (594), Expect = 1.34e-71
Identity = 117/129 (90.70%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 1   MVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV 60
           MVSGLPEVIRVAY FMIVMLLCMG+WSFGV+GIVASSMGDGGRWWLLVVFSISLFWAG V
Sbjct: 190 MVSGLPEVIRVAYAFMIVMLLCMGVWSFGVAGIVASSMGDGGRWWLLVVFSISLFWAGVV 249

Query: 61  LCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLIKASRYAVTTSFGSICYGSLFTAAIRTL 120
            CNTLHVIVSGMVFLVL HGGRESSSMPSKSL+KASRYAVTTSFGSICYGSLFTA IRTL
Sbjct: 250 FCNTLHVIVSGMVFLVLFHGGRESSSMPSKSLMKASRYAVTTSFGSICYGSLFTAPIRTL 309

Query: 121 RWEVFGANS 129
           RWE+ G  S
Sbjct: 310 RWEIRGIRS 318

[Close]

BLAST of Cucsat.G9436.T17 vs. NCBI nr
Match: XP_022977327.1 (CTL-like protein DDB_G0274487 isoform X1 [Cucurbita maxima])

HSP 1 Score: 233 bits (594), Expect = 1.41e-71
Identity = 117/129 (90.70%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 1   MVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV 60
           MVSGLPEVIRVAY FMIVMLLCMG+WSFGV+GIVASSMGDGGRWWLLVVFSISLFWAG V
Sbjct: 192 MVSGLPEVIRVAYAFMIVMLLCMGVWSFGVAGIVASSMGDGGRWWLLVVFSISLFWAGVV 251

Query: 61  LCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLIKASRYAVTTSFGSICYGSLFTAAIRTL 120
            CNTLHVIVSGMVFLVL HGGRESSSMPSKSL+KASRYAVTTSFGSICYGSLFTA IRTL
Sbjct: 252 FCNTLHVIVSGMVFLVLFHGGRESSSMPSKSLMKASRYAVTTSFGSICYGSLFTAPIRTL 311

Query: 121 RWEVFGANS 129
           RWE+ G  S
Sbjct: 312 RWEIRGIRS 320

[Close]

BLAST of Cucsat.G9436.T17 vs. ExPASy TrEMBL
Match: A0A0A0KR48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608460 PE=3 SV=1)

HSP 1 Score: 244 bits (622), Expect = 4.43e-76
Identity = 125/129 (96.90%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 1   MVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV 60
           MVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV
Sbjct: 192 MVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV 251

Query: 61  LCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLIKASRYAVTTSFGSICYGSLFTAAIRTL 120
           LCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLIKASRYAVTTSFGSICYGSLFTAAIRTL
Sbjct: 252 LCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLIKASRYAVTTSFGSICYGSLFTAAIRTL 311

Query: 121 RWEVFGANS 129
           RWE+ G  S
Sbjct: 312 RWEIRGIRS 320

[Close]

BLAST of Cucsat.G9436.T17 vs. ExPASy TrEMBL
Match: A0A5A7SXE5 (CTL-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00800 PE=3 SV=1)

HSP 1 Score: 239 bits (611), Expect = 2.01e-74
Identity = 122/129 (94.57%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV 60
           MVSGLPEVIRVAY FMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV
Sbjct: 192 MVSGLPEVIRVAYAFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV 251

Query: 61  LCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLIKASRYAVTTSFGSICYGSLFTAAIRTL 120
            CNTLHVIVSGMVFLVLIHGGRESSSMPSKSL+KASRYAVTTSFGSICYGSLFTAAIRTL
Sbjct: 252 FCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLMKASRYAVTTSFGSICYGSLFTAAIRTL 311

Query: 121 RWEVFGANS 129
           RWE+ G  S
Sbjct: 312 RWEIRGIRS 320

[Close]

BLAST of Cucsat.G9436.T17 vs. ExPASy TrEMBL
Match: A0A1S3BFC7 (CTL-like protein DDB_G0274487 OS=Cucumis melo OX=3656 GN=LOC103489263 PE=3 SV=1)

HSP 1 Score: 239 bits (611), Expect = 2.01e-74
Identity = 122/129 (94.57%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV 60
           MVSGLPEVIRVAY FMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV
Sbjct: 192 MVSGLPEVIRVAYAFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV 251

Query: 61  LCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLIKASRYAVTTSFGSICYGSLFTAAIRTL 120
            CNTLHVIVSGMVFLVLIHGGRESSSMPSKSL+KASRYAVTTSFGSICYGSLFTAAIRTL
Sbjct: 252 FCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLMKASRYAVTTSFGSICYGSLFTAAIRTL 311

Query: 121 RWEVFGANS 129
           RWE+ G  S
Sbjct: 312 RWEIRGIRS 320

[Close]

BLAST of Cucsat.G9436.T17 vs. ExPASy TrEMBL
Match: A0A6J1IPU0 (CTL-like protein DDB_G0274487 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477654 PE=3 SV=1)

HSP 1 Score: 233 bits (594), Expect = 6.50e-72
Identity = 117/129 (90.70%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 1   MVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV 60
           MVSGLPEVIRVAY FMIVMLLCMG+WSFGV+GIVASSMGDGGRWWLLVVFSISLFWAG V
Sbjct: 190 MVSGLPEVIRVAYAFMIVMLLCMGVWSFGVAGIVASSMGDGGRWWLLVVFSISLFWAGVV 249

Query: 61  LCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLIKASRYAVTTSFGSICYGSLFTAAIRTL 120
            CNTLHVIVSGMVFLVL HGGRESSSMPSKSL+KASRYAVTTSFGSICYGSLFTA IRTL
Sbjct: 250 FCNTLHVIVSGMVFLVLFHGGRESSSMPSKSLMKASRYAVTTSFGSICYGSLFTAPIRTL 309

Query: 121 RWEVFGANS 129
           RWE+ G  S
Sbjct: 310 RWEIRGIRS 318

[Close]

BLAST of Cucsat.G9436.T17 vs. ExPASy TrEMBL
Match: A0A6J1II55 (CTL-like protein DDB_G0274487 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477654 PE=3 SV=1)

HSP 1 Score: 233 bits (594), Expect = 6.82e-72
Identity = 117/129 (90.70%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 1   MVSGLPEVIRVAYVFMIVMLLCMGIWSFGVSGIVASSMGDGGRWWLLVVFSISLFWAGAV 60
           MVSGLPEVIRVAY FMIVMLLCMG+WSFGV+GIVASSMGDGGRWWLLVVFSISLFWAG V
Sbjct: 192 MVSGLPEVIRVAYAFMIVMLLCMGVWSFGVAGIVASSMGDGGRWWLLVVFSISLFWAGVV 251

Query: 61  LCNTLHVIVSGMVFLVLIHGGRESSSMPSKSLIKASRYAVTTSFGSICYGSLFTAAIRTL 120
            CNTLHVIVSGMVFLVL HGGRESSSMPSKSL+KASRYAVTTSFGSICYGSLFTA IRTL
Sbjct: 252 FCNTLHVIVSGMVFLVLFHGGRESSSMPSKSLMKASRYAVTTSFGSICYGSLFTAPIRTL 311

Query: 121 RWEVFGANS 129
           RWE+ G  S
Sbjct: 312 RWEIRGIRS 320

The following BLAST results are available for this feature:

BLAST of Cucsat.G9436.T17 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q869R1	2.1e-07	31.15	CTL-like protein DDB_G0274487 OS=Dictyostelium discoideum OX=44689 GN=DDB_G02744...	[more]

BLAST of Cucsat.G9436.T17 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135106.1	9.14e-76	96.90	CTL-like protein DDB_G0274487 [Cucumis sativus] >KGN52058.1 hypothetical protein...	[more]
XP_008446568.1	4.15e-74	94.57	PREDICTED: CTL-like protein DDB_G0274487 [Cucumis melo] >KAA0034536.1 CTL-like p...	[more]
XP_038891301.1	5.71e-74	93.80	CTL-like protein DDB_G0274487 [Benincasa hispida]	[more]
XP_022977383.1	1.34e-71	90.70	CTL-like protein DDB_G0274487 isoform X2 [Cucurbita maxima]	[more]
XP_022977327.1	1.41e-71	90.70	CTL-like protein DDB_G0274487 isoform X1 [Cucurbita maxima]	[more]

BLAST of Cucsat.G9436.T17 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR48	4.43e-76	96.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608460 PE=3 SV=1	[more]
A0A5A7SXE5	2.01e-74	94.57	CTL-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G008...	[more]
A0A1S3BFC7	2.01e-74	94.57	CTL-like protein DDB_G0274487 OS=Cucumis melo OX=3656 GN=LOC103489263 PE=3 SV=1	[more]
A0A6J1IPU0	6.50e-72	90.70	CTL-like protein DDB_G0274487 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1II55	6.82e-72	90.70	CTL-like protein DDB_G0274487 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007603	Choline transporter-like	PFAM	PF04515	Choline_transpo	coord: 3..123 e-value: 1.5E-11 score: 44.1
IPR007603	Choline transporter-like	PANTHER	PTHR12385	CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)	coord: 1..129
None	No IPR available	PANTHER	PTHR12385:SF81	PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN	coord: 1..129

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G9436	Cucsat.G9436	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9436.T17.E1	Cucsat.G9436.T17.E1	exon
Cucsat.G9436.T17.E2	Cucsat.G9436.T17.E2	exon
Cucsat.G9436.T17.E3	Cucsat.G9436.T17.E3	exon
Cucsat.G9436.T17.E4	Cucsat.G9436.T17.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9436.T17.C2	Cucsat.G9436.T17.C2	CDS
Cucsat.G9436.T17.C1	Cucsat.G9436.T17.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9436.T17	Cucsat.G9436.T17-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity