Cucsat.G9024.T23 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CATTGATGCACTAAACATAATACGTTTGTTGCATTGTCGATACATTTGTTACGATTTGTTCATACACTTGATGAGTTTAATACACTCTCTCTATAAGTTTGATACACCAAATACACTACTGATAAACGTTTTATACTTCACCGATACACTTGAAAAATTCAATGCACTTGATACAGTTCATATGTTTGATACCCTTGATGTATTGATACACTTTCTATATCTACCGATACACTCAATTGATTAAAATACACTTGAGATTCTCTGTTGATACACTTAATATACTTCACTAGTAAACATTGATACATATTATATGTTTGATACACTAAGTTATATCATTCATGTACTTAATAATACTAAAACGAATGTATATCAACCAACTAACAGTTTAATACTAAAATGGATGTTGTGAATTATTTTGGACTAAAAGATTAAAAAGAAGAAACTCTAAAAGAGTTTGGAAAATTATAAAGTCTCACGAAAAAGACAGAATTTCAAAGTCATAAACCATAAAGGTTGGACCCAAATTCGCCTTGGAAAATAAAATAGTTTAGATCATAGACTTGAACCAAGCTACGTTCAATCTTGACCAAGGTTGAAGTTGAAGCCTTCCTTTTCAACGAATTGGTTGATTGATCATTAACCCAACTAAACATGGAGATCAAGAGAGGAATAAGGTATGCCAAATATATCATAGGTGATCAAATCCTCTTTATTTTACATCTCTCAAAGAAAGAAAGAAAAGTAAACTAAAACAAGGGTAGTGATGAAACCACGTAACAAAAGGGTATTTGTGATCGAAATCAAAATTAAAAATCAAAAACAAAAAGAAGAAGAAAAGATCCCTTTGAAGAAATACCACAAGATAATTTTGTGTCTTAAATGAAACCTCTGATCTTCTAGTTGTTTTTCTTTTTGACAAACCATTCTCCTTCCTCCACGTTTTCTTATTTTTTGTATTTTCCAACCGTCTCCATCAAATATTAAAAAATATCCAAAACAATGATATATGATAACAATTTCTTCTTCAACAAACTGAAACTAATAATACATTATTATTACTTCTATTATCTCTTAAACCGTGCGGTGGCGCCGCCGTAGAACCATGGCTTCGGCCTTCCATTATTACAGCTGCTGCTGCTGCTTCTTTTCCATAAATGGTGGGAAAGGCAATAATAGAGTTTCTCCAGTGAGGCCGAGGGCAGTGGCTCCTAATTTTGAGGTAATATATTTCTTTAATACTTTGCCCTTCATAATCTAACATCTCTTATTTATGCTTAAAATACTCTTTTTTTATTTTTTACAACTATGGAGTGTAAATGGTTTGTGAATTTTTTAACTCAAAAACCAAAACAAAGGTTAGGAAATGGAAGCTTAATTAATGTTATAAAGCTTGGTGGTATATATAAATTTTGTATGTATGTAATGACAGGAAGAGAAAGTGATCAAGTTGGGGGGTTCTGAAGTGAAGGTAAGTAGGCTTGGAATTGGAGCTTGGTCTTGGGGAGATAACATCTATTGGAATAATAATAGCTTTGATTGGGATGGTACATTTCATCTCTAGCTCTTTCTCTCTCAAAATAATAATATATCATGTGTATTTTGATTTCTTTTTTCTATTCACTAACTATTTTGGTTAAACAAAATTTCTTACCAAAGTTAATGTAGAGAAAGAAGAGATTGAGATTGGTAATACAGAAATTGTTGTTTTCTTTTTTTCCTGGAAAATGATGAAAGGAAAGGAGAGAGAGTTGTTATGTTCCTATAAACTACAAAGCCAAAATTGATGTTAAGATAGTGATTAATGTCGTATCTGCTAACGTATACTTGGATTGAATAATTGATGTTTGGAAATTTTCTTTCTTGGCGTGTGACTTCAGATAGGAAGATGAAAGCTGCTAAAGCTGCTTTTAATGCCAGTATTGACAATGGCATTACGTTCATTGATACTGCTGAAATTTATGGCGCTCCAGTGAGATATATCACTATTTTATTTTTGTTAATATAGTTCTCGTCTGGTAACAATTTTATTCTTTTTTTAAAAAAAAATTATGCCTATTTTTGTTGTACTTGTTACAATGATTTGCATTTTTCTTAAACATAATAGTTAAATTCTTAATCAAATTAAAAAAAAAAAAAAAACAAAACAACTTTTGTCTTGTTTTTTTAAAACTATTGGTAGAATGTAGATAACAAATAAAGAAAGCTGAAGGCTGAAGCAGTATCTATAACTTAATTTTTTTTAAAAAAAAAAACTAATAACAAAATAGTTAACAAACGAGGTCTGTGTTGTTAATTATGTTCCAAAAGTGACATTTGCTAATTGAAATCGTTAATTCCTTTTCTTATGCAGTACACGTTAGGCTCAATAAATTCAGAAACTCTTCTAGGAAGGTATTGTTTGAAACACTAAGGGAATATTTGAAAAACAACTTTAAACGGGTGGATTGTTCTATTACAGCACACTGCATACGTTTGAGACTTCAATATCAGTTAGTGTTTACAACTATTATAATAATCTATAATTAACTGCATAATATTACTATTTTAATTCTCTTTACACTTTTAACTATTTGATATAACATTTACTATTTACTCATCATTTATATTTTTCTCTTTTGTTGCTACATTTCCTATTTTCTTTCCAAAACTAAAATGATATGCACTCTAAACACAAACTATCATATATAACATATAATTAACTATAACAACCAACTCTCATCAGTGTTCTAAACACCCATAAAATCAGTTTAGGAATATTTATGTTTATCTTGTTCGTTTTGTTTCTTATCTTTTTAAGAGACTAGATTATTTTGATAACAATTTTTCTTTTTAGTTTCTTAATAATTTAGAACTAAGAAATACATAAACAATTATCAAGCAATTTTTTCTCTTAAAAGATGAGAAACAAAAAACAAGAAACTTTATCAACGAATTTGTAGTAATTATCAAATGCTTAATTATGTTTCTATAAACTACAAAGCAAAAAGTATGTCACTTTTTAACGACCCCTAAGGTTATGCATTAGTGGCAGCCACTTGCTCGAAATCCTTCTAATAAAAAACAATTCCAAGTTTTTCTTTAGATTCATTAAAGAAAGAAAGCGAAAGGATCCTGGATTTGAGATCACAATTGCTACCAAATATGCGGTTTTTCCATGGAGGCTCGGTCGTCACAGTGTCGTAAGTGTTCTCAAAGAATCACTTTGTCGTCTCGGTCTCGAATCGGTTGACTTGTATCAACTTCATTGGTATGCGCTGCTCTTTAAACTCTCTTCTCATGTTCTTGTTTTACTGTAGTTATTTACTCATCGATCCCTTTGAATTTCAGGCCTGGAATATGGGGAAATGAAGGTTTGTTCAAAGTAGTTTGAAAGTTATTTGAATTTTTTTTTTCTTTTGAAGGATTTAATGACCATATGATTGTGAAGAAGAAGCCTAATTAAGTTCATAAAGAAATCATTTTTCAGAGTATATTGATGGTCTTGGAGATGCTGTTGAGCAAGGACTTGTGAAGGGTGTTGGTGTTTCTAATTATAATGGTATATGTTCTAATCTTAATTTTGGTATATATACAAACTTAATTAATAATGTGATGGCAAACCTTTTATAATTTTTGTTGTCCTATAAAAATGAAATATATTTGTTAATAAAAGTGTGTAGTTCTGGTCGTATATGTATCCTATTTTCTTCTATAAATTTCCACTGCATGCATGCATGCATGTCATGTTGTGTTTATGTCTTATATTCATTTTCTATAATGTAGAGAAGCGACTTCGAGATGCGTATGAAAAACTAAAGAAAAGAGGTATTCCACTAGCTTCAAATCAAGTGAATTATAGCCTCATATATAGATTACCTGAAGAGAACGGTGTGAAGGCTGCTTGTGATGAACTTGGGGTCACCTTGATTGCTTATGCACCTTTAGCTCAAGGTAATTAATTCCACACCTAACACTAAATGTATTTTATAGAAAATTATTTCATTCACGTATATTCTGAGTCGCATCTTCAATGATTGATTTTTTTTTTATAAAGATACTTTAGGATAGCTGATGCAAGGATATCTCCACATGGGGGACATATCATAGCATCAGCTATAGTCCCACTTTATTAATAATAAAAGGTGATTATAAGAAGCGGGGGAATAGAAAGGCTAGAGGGCAGCCCGATTATCCCAAAACGAAAGCATGTAAATTTAAAGCAAAAGTATTAGACGAGTAGTTTTTGAAAAGTGAAGATCGGCTTGTCCATAGACCGGTTGTGGCTTGAATGTCTTCAATGATTGATGCAATATTAAATTCATATTCACCCACTAGCTTAAGTGTCTTTTGGGTCGGTCAAACTTCTTCATTATTGTTTTACTCCCAAATTAATATTCATTTCCACCTTGTTGGATTATATAGAATTAAATTCACCTTTACCCACTTAGGTTAAACTTTTGGATCGAGTTGGTGATTTAAGATACTCAATTTTTGCAGTTGAACTTAGTTAGTGGTTCGATTGGAGTTCTCAATAACAATTTTTTTTCTTTTTTTTTTTTTTATAAATATTTTTTAAATTTTTCTACCCTTACAAACCGAAAATGCACCCAAATATTGTTTGGATGCACATACACATTTTTATTCACTTTTATTTGGCAAATATATTTAGATTACTAATTAAAGGAGAGATATATACCTCACCAACAATTGTCTCTACTTTTCTTTTTCTTTTTACAATTTGGAAACTTTGGGATCTTTCTTCAACCTCTTCTTAAGAATATATTGAAAAACCTAAAATACATTAGTTAATTAAGTTTTTAAAAAATGTAAATAATTTTAATATGGTATTATGAGAATTAAGTAAAAAGAAAAAGTTATAATTTTGAATTTTGCCATGATTAAAAGATTTTGTCATTTTTATACATGTGAGTCAACCGTTGTTTTGTTGTCCTTCTCTTTGATTGAACATGATTCATATCTTATAACGATCGTCTAAATGAATTATTTGTTGAATTGTTTTCATTTTTAGATTTTAGATATTTTTCTTATTGAAAGCTTGGTTTCTTAATCACAGGCGTTCTAACGGGAAAGTACACACCAACAAATCCTCCAATTGGCCTTCGATCCCTAGTTTACTCTTCAGAGTTTTTAGCAAAGGTTAGAAGAAAAAAAAAATATTTTTTTAAATCTACGAAGAACAAAACAAAATTAAACAAGAAGGTACCACGGCATTTTCTATTTATTTGTGACTAAACCTTTTAATTAATTTACATGTGCAGCTTCAACCACTCTTGAATCTAATAAGGGACATAGGAGAGAAGTACAATAAATCCCCCACACTAGTTACTTTACTTTACTTCCTTTGTATATACAATTAACTATGTTTGTTCTTTTTTTATTTATTTGTTTTGTTGATGCGTGTTATCTCTACCTTTAGCATATCCGTTTTTAGAGCTTATTTGATAACTTTTCTGAATGGTATGTTTTAGTGTGTAACGAAGTAGATTGTTTAATTCATCGTGGTATCTAAAATATTGTAAAGAGATTAAATATAGGGGAGATCAATTTATGACACTCTTAGACTTTAGAGGTTTTCGTAGAAGATCCAAATAGTCATCTTTTACTCTTTGTGGATGTTAAATTCGAATGAAATTACTAAAAATGAAACCATCAAGTGAGCACGAATGCGCTCTCTTGCTTCGCTTTCTCTTGTTATGTTATTCGGTGCTTGCGCACTGTGCATGCAACACAACAGAAAAGTAAAGTGAGAGAGAAGAAAAAGTGGGCAGAAGAAGAAGAAGGGCTTGTCAAAGCTTGTGGAGTGGGTGTTGGGAGGGGAAACTTTTGATTTCGCTACAGATCAAGAAGAAGAGGGTGGAAGGGAAAAAGAGAAATATATATATGCAAAGATCAGGAAGAAAGAGAGAGAAAGAAAGGGTAGTTTTGTAAAGTTTGTTGATGATTATCATTTTATAACTTTCAATGAAGATAGTTTCAAATTCCAAAATTTAATGTTTGTGTGTGTAAATATTATTTTCATAAAGATGTAACCTGTACTGTTGGTTTAATTATTGATTAGGTGGTGTTGAACTGGTTGATAGCACAAGGAAATGTGGTGCCAATCCCTGGAGCCAAAAATGAAGAACAAGCCATTGAATTTGTTGGTGCTTTGGGTTGGAGAATTTCCAATGAAGAAATACACGAACTCCGCTCCTTCG ATGGCTTCGGCCTTCCATTATTACAGCTGCTGCTGCTGCTTCTTTTCCATAAATGGTGGGAAAGGCAATAATAGAGTTTCTCCAGTGAGGCCGAGGGCAGTGGCTCCTAATTTTGAGGAAGAGAAAGTGATCAAGTTGGGGGGTTCTGAAGTGAAGGTAAGTAGGCTTGGAATTGGAGCTTGGTCTTGGGGAGATAACATCTATTGGAATAATAATAGCTTTGATTGGGATGATAGGAAGATGAAAGCTGCTAAAGCTGCTTTTAATGCCAGTATTGACAATGGCATTACGTTCATTGATACTGCTGAAATTTATGGCGCTCCATACACGTTAGGCTCAATAAATTCAGAAACTCTTCTAGGAAGATTCATTAAAGAAAGAAAGCGAAAGGATCCTGGATTTGAGATCACAATTGCTACCAAATATGCGGTTTTTCCATGGAGGCTCGGTCGTCACAGTGTCGTAAGTGTTCTCAAAGAATCACTTTGTCGTCTCGGTCTCGAATCGGTTGACTTGTATCAACTTCATTGGCCTGGAATATGGGGAAATGAAGAGTATATTGATGGTCTTGGAGATGCTGTTGAGCAAGGACTTGTGAAGGGTGTTGGTGTTTCTAATTATAATGAGAAGCGACTTCGAGATGCGTATGAAAAACTAAAGAAAAGAGGTATTCCACTAGCTTCAAATCAAGTGAATTATAGCCTCATATATAGATTACCTGAAGAGAACGGTGTGAAGGCTGCTTGTGATGAACTTGGGGTCACCTTGATTGCTTATGCACCTTTAGCTCAAGGCGTTCTAACGGGAAAGTACACACCAACAAATCCTCCAATTGGCCTTCGATCCCTAGTTTACTCTTCAGAGTTTTTAGCAAAGGTGGTGTTGAACTGGTTGATAGCACAAGGAAATGTGGTGCCAATCCCTGGAGCCAAAAATGAAGAACAAGCCATTGAATTTGTTGGTGCTTTGGGTTGGAGAATTTCCAATGAAGAAATACACGAACTCCGCTCCTTC MASAFHYYSCCCCFFSINGGKGNNRVSPVRPRAVAPNFEEEKVIKLGGSEVKVSRLGIGAWSWGDNIYWNNNSFDWDDRKMKAAKAAFNASIDNGITFIDTAEIYGAPYTLGSINSETLLGRFIKERKRKDPGFEITIATKYAVFPWRLGRHSVVSVLKESLCRLGLESVDLYQLHWPGIWGNEEYIDGLGDAVEQGLVKGVGVSNYNEKRLRDAYEKLKKRGIPLASNQVNYSLIYRLPEENGVKAACDELGVTLIAYAPLAQGVLTGKYTPTNPPIGLRSLVYSSEFLAKVVLNWLIAQGNVVPIPGAKNEEQAIEFVGALGWRISNEEIHELRSF Homology
BLAST of Cucsat.G9024.T23 vs. ExPASy Swiss-Prot
Match: Q94A68 (Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g06690 PE=1 SV=1) HSP 1 Score: 469.2 bits (1206), Expect = 4.0e-131 Identity = 219/326 (67.18%), Postives = 260/326 (79.75%), Query Frame = 0
BLAST of Cucsat.G9024.T23 vs. ExPASy Swiss-Prot
Match: Q56Y42 (Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PLR1 PE=1 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 6.8e-54 Identity = 124/343 (36.15%), Postives = 191/343 (55.69%), Query Frame = 0
BLAST of Cucsat.G9024.T23 vs. ExPASy Swiss-Prot
Match: P77735 (1-deoxyxylulose-5-phosphate synthase YajO OS=Escherichia coli (strain K12) OX=83333 GN=yajO PE=1 SV=2) HSP 1 Score: 114.4 bits (285), Expect = 2.5e-24 Identity = 91/322 (28.26%), Postives = 155/322 (48.14%), Query Frame = 0
BLAST of Cucsat.G9024.T23 vs. ExPASy Swiss-Prot
Match: P46905 (Uncharacterized oxidoreductase YccK OS=Bacillus subtilis (strain 168) OX=224308 GN=yccK PE=3 SV=2) HSP 1 Score: 106.7 bits (265), Expect = 5.3e-22 Identity = 95/320 (29.69%), Postives = 152/320 (47.50%), Query Frame = 0
BLAST of Cucsat.G9024.T23 vs. ExPASy Swiss-Prot
Match: P80874 (Aldo-keto reductase YhdN OS=Bacillus subtilis (strain 168) OX=224308 GN=yhdN PE=1 SV=2) HSP 1 Score: 106.3 bits (264), Expect = 6.9e-22 Identity = 73/230 (31.74%), Postives = 122/230 (53.04%), Query Frame = 0
BLAST of Cucsat.G9024.T23 vs. NCBI nr
Match: XP_031739634.1 (uncharacterized oxidoreductase At1g06690, chloroplastic isoform X2 [Cucumis sativus]) HSP 1 Score: 686 bits (1769), Expect = 2.31e-248 Identity = 338/359 (94.15%), Postives = 338/359 (94.15%), Query Frame = 0
BLAST of Cucsat.G9024.T23 vs. NCBI nr
Match: KAE8649790.1 (hypothetical protein Csa_012389 [Cucumis sativus]) HSP 1 Score: 606 bits (1563), Expect = 4.91e-218 Identity = 292/293 (99.66%), Postives = 293/293 (100.00%), Query Frame = 0
BLAST of Cucsat.G9024.T23 vs. NCBI nr
Match: XP_031739635.1 (uncharacterized oxidoreductase At1g06690, chloroplastic isoform X3 [Cucumis sativus]) HSP 1 Score: 595 bits (1535), Expect = 5.18e-213 Identity = 299/347 (86.17%), Postives = 304/347 (87.61%), Query Frame = 0
BLAST of Cucsat.G9024.T23 vs. NCBI nr
Match: XP_031739633.1 (uncharacterized oxidoreductase At1g06690, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 583 bits (1503), Expect = 8.38e-208 Identity = 299/368 (81.25%), Postives = 304/368 (82.61%), Query Frame = 0
BLAST of Cucsat.G9024.T23 vs. NCBI nr
Match: XP_038899439.1 (uncharacterized oxidoreductase At1g06690, chloroplastic-like isoform X2 [Benincasa hispida]) HSP 1 Score: 558 bits (1439), Expect = 4.33e-198 Identity = 291/364 (79.95%), Postives = 306/364 (84.07%), Query Frame = 0
BLAST of Cucsat.G9024.T23 vs. ExPASy TrEMBL
Match: A0A0A0KZ54 (Aldo_ket_red domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G614230 PE=4 SV=1) HSP 1 Score: 698 bits (1801), Expect = 6.74e-254 Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0
BLAST of Cucsat.G9024.T23 vs. ExPASy TrEMBL
Match: A0A6P6XJL3 (uncharacterized oxidoreductase At1g06690, chloroplastic-like isoform X4 OS=Coffea arabica OX=13443 GN=LOC113743374 PE=4 SV=1) HSP 1 Score: 496 bits (1277), Expect = 4.14e-174 Identity = 247/337 (73.29%), Postives = 273/337 (81.01%), Query Frame = 0
BLAST of Cucsat.G9024.T23 vs. ExPASy TrEMBL
Match: A0A6J1FBQ8 (uncharacterized oxidoreductase At1g06690, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111442613 PE=4 SV=1) HSP 1 Score: 496 bits (1276), Expect = 9.72e-174 Identity = 247/345 (71.59%), Postives = 278/345 (80.58%), Query Frame = 0
BLAST of Cucsat.G9024.T23 vs. ExPASy TrEMBL
Match: A0A2P2L824 (Aldo/keto reductase family protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 494 bits (1271), Expect = 6.46e-173 Identity = 239/334 (71.56%), Postives = 272/334 (81.44%), Query Frame = 0
BLAST of Cucsat.G9024.T23 vs. ExPASy TrEMBL
Match: A0A6J1FHH6 (uncharacterized oxidoreductase At1g06690, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111445810 PE=4 SV=1) HSP 1 Score: 493 bits (1270), Expect = 9.17e-173 Identity = 246/340 (72.35%), Postives = 271/340 (79.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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