Cucsat.G8930.T6 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATAAAGAAAATAAATGATGACAGTAAATTATGGTAATAATATTATTATATAATTAAATTCTTTCATCTTCCTAACAGAGAGAGAGAGAGAGAGAGTGAGGATCGTCCTCTCAACGACGCTGATCCCAACTGTTCCAGTCTCAAATCTGTGTGTACCAATCCAACCAATCCTTCCTTTAAGCTAAACCCACCATTTTCTTTTCTTCCTAAAACCCACCCTTTCTGTCTCGCCGGACCTCTTCAGATTTTGCCTCAAAAAACCATGTCCAATTCTCCTCTGCATCTCCTCTTTCTCCTCTTTTTCCTTGTCCTCTGTTCCCAATCCTACAGCTCCCGCCTTCCTTCCATTTCTTCCATCACTTCTTCTTCTTCCTCCTCCTCTGATCTGGTCTCCGATGGCATCAATGGGTTGCAGGAACCCTCTTATCTGCATCTCAATACGCTTTCTTCATTATCTGCACCAGAGGAAGAGTCTTGCGAGCAGTCTTATGGGTTTCTTCCCTGTACCACCACTGCTTTGGGGAATTTGTTTTTGATTATCGTTTATGGATATTTGATGTTTTTGGCTGCTACGTATTTGTCTACTGGAAGCGAGCTCTTGTTGGAGATCTTGGGACCTGGAATTGTGGGGGGATTATTCCTTCCTGCGCTTGGTGCTCTTCCTGATGCCATGTTGATTCTCGGTACTTTTTTTTATTTTTTTCTCTTCTATATTTCTTTTGCACTTTCATGGGTTTGACCTGTAATCGAAATGTCCTGCGAAATGAAATGGGTTGGCTTATACCTTTTCTCAAGAACATGATCGTTTTGATTTGTGAATTTGAGGTGGGGTTCTGTTTCTGTGATCCAGGCAAAGGCTATATAGATTAAGGTTCTGTGGATGATCCATATCTTACTTTCGTTTTTCGTTTGTTCATTTCCCCATGAACTATTTGATCGTAGAAACTACATAAACGCGGTGGGAATAGAATTAGAATGGTGAAATGTATAGTGGAGTTCTCTTTTGTTTTTTCTTGGCTACTTTTTCCAAAAAAAAAGTTCCGTTTATTGACCCCCCAAAAGTTTCCTAAACGGATCGAGTATTGTAAAATAAAGGTGGGGGTGCCTTGTTATTGAAGTTCTATTTGCTATGATATCTCTACTTTGCTTTGTTTGATTTTTGCTTGGTGTGGGCATCTCTCTGCTTTTGCTGAGCTCGCTTTTCTGGCGATTCCTTGGTTCATCAAACTTTATTGTACTTCAATTTTTGCTGCTTGTCGGTTATATCTCAACATCAAGAACCTGAACGATTCTCATCTCTTTTTTTTTCCAAGACCGACATCTTTTCAAAAACCCATCACTTAGTTCCCAAACTGGGCAAGATTTATTCCAAAATTTCAGTTTAGCCATTACTCTATGTTTTCAAAATGGACCATCCTCTAATATCTGTTGTCTTTTTGTTTCTTGAGCCGTTTCTAAATGATAGGTTATGTAATTCTGAACTCCATATTTTTTGGGTTCATATTTTACATCGATTTTCGTTGTGGCAAAATGATATCTAGACTTTCACCAATAGAAGTTAGTTAAATGAGCTTAATCGAATATGAAGAGTGATAAAAAGCACCGAGTTCTTAAGCTTGAATTGGCCACACTCATTGGAATGTCTACTGTTTTGATTTCTCTTGTTTCAGTTTGTTTGTGACGAATGAGAGATCTGAAAAAAACCCTCTAATCTTCTCCTTTCTATAGTTTCTGGTCTTGCAGGAAGTGCTGAAGTTGCACAAAGCCAGGTCTCTGTTGGAATGGGTCTACTAGCTGGCTCAACTGTCATGCTTCTTACACTGATCTGGGGCACATGTGTGATTGTTGGGAAGTGTGACCTTCAAGATTCAGTTGCCATAGATTCACAGGATACAAAAGGGTTTAGCTTGACTGGTATGTCATTTTATCTTAGTTATATTCAACTGAGGTGTCCGATCGTGTTCATGCATGCCTTCGTTTTAGAAAGTTGAATCTTATTCAGGGGAGCGTGATGCTTTCTTATGGTGTGGAAACAAGGATGATGCTATTCGTAATGGATCAATACTTTTTGATCAATAATACACCCTTTTTTTTCATCAAGGCTTACAAAGGAAAAGGACATATTTTGAATAGTATTTAAGGTGTTATGTGAGTTCTGTCATTGACTACAGGCAACTTCTATTGTTTTAGCCGTGACTTGTGACAACGACAATTTATCGTGTTAATCTACTCTTCATATTGCCTAGAAACTGAATATTAGGTAAACTTGGTGAAACTACTTGCAAGCATCAATTAAAGCGTAACGTAGTCGTACATGCTGGGAAGACCCCTAGTTTTTCACCTTATGAGCATACCTGAAGCTGTTAGTACACGGTTGCCTATTAATGCTTCATCATTGCACTTCCATACTTCCTATTGATCTCTTTCTGATTGTCAACTATTCTCAGTCAATGGTCCATTTTCTCATACGTGCTATTGGATCAACTGAATTGGATTTTAATTTCCGAATGTTATATGGTTTTTAAGTTCTGTGGATACTTCGATGCATAAATTTACGTTGAAATTTTTTCTTTGACAGAATCTGGAGTTAGCACTGATATTTGGACCAGCTATGCAGCCAGGATTATGGTTATATCTGTTGTTCCATTTTTGATCGTTCAACTTCCACAAATGCTCAATTCAACATCAGGAAGGCACTTGGCAGTTTTGATTGCTCTTATTATCTCTGTTTCAATGTTCATTATCTATTGCCTTTACCAGGTATTTTTTTCTATTTCTTAGCTCATTTTTTATTAAGTTTACCCAAAATTTTATTTTCATTTTTTTGAATTTGTTGTCTACACAACATTGGAAAATTAAAAAGACCCACATTTACAGATTTTTCATGTTTTAAACTTTTAAACACAAATGCTAACTCAAGTAAGCTCACCTTCATTCAAACACCGAATTTGGTGAGAAAGAAACATAGGTAGCTACTCTAATCTTCCAGAGTTCAAAAGTTATAGCTTCAACGGAAGGATCGATACCTTCACAATGTATTAAATTTATTCTATTAAACTTGATGTTTACCTTTTACTTTAAGGATAAGACTTATTTCGTTCTATTTTTTCTCTCATGTAAATGTTTGAAATCTTACTTCAATGATATCCTACTTCATGAATTCGAGAAAATTTGTGCAGGTCTTCCAACCATGGATTCAAAGGAGGAAACTTGCTTTTGTCAAGCACAAGCATGTTATATTTGGATTTTTAAGACATTTAAAACAGCAAACACTTGGAAGACTCCTGACAGAGAATGGGGAGCCAGATAAAGAAATAATAGAGAAGTTCGTTGGAACTAGAAGTTCAATTGTTCATTTTTATCATCTCCTTTTTATTTTATCATATGCTGATAGTTGCTCAATGAACATAATGACAGGTTATTTTCAAGAATTGATGTGAACAAGGATGGACTTCTATCAGCTTCTGAACTGAGAGCACTAATAGTTGGCATTCAGTTTGACGAGATGGACTTGGATCATGATGATGCTGTTGACAAAATAATGAATGACTTTGATACTTCTCGTGATTCCCATGTTGATTCTAACGAGTTTGGCAATGGAATCATTAGGTGGCTTTCTCAAGTTCAAGGTTCAAGAACTGGCAGAGGTGAGGATGGTCCTCACACAATGAAGTACCTGCATAACTTTCATCAAGTAAGTTGTAAGCTGTTAGCTGTATTTCTCCTTTCAATTTTTAGTTTCGCTTTTCTGAAGCATGTCATGATGTATCTACAGGAAACAAAGAGAGAACACGATTTGCTGGATGTTGGGGAACAGAGCGATGAGGTCGTAGAGGGCGTCGAGGAGGGGAAGGGGGTCTTGATAAAAGCTATACTCTTCTTGTTACTTGGAACCGCCATTGCTGCTGCCTTTGCTGACCCTTTGGTTGACGTCGTACATAACTTCTCTAATGCAACTAAAATCCCTGCGTTCTTTATTTCATTTATTGCTCTGCCATTAGCAACCAACTCAAGTGAAGCAGTCTCTGCTATTATCTTTGCAAGCCGTGACAAGCGAAAAACTGCCTCATTAACATTTTCCGAGGTTTGTCTTCTTTTATACTCAACATTTTGTTTCTTTACTCAGTTAATTTGTACTGGGGACCAGTTGAAAGGAAAACTGGAAGAAATTGGAAGAATGATTGACCTCTTACCTATAAGCTTTCATGGTGCAGCTATATGGAGCAGTTACAATGAACAATGTCCTCTGCCTATCAGTTTTCTTGGCTCTTGTTTACATGAGAGGATTGGTTTGGAACTTTTCATCTGAAGTGCTGGTCATTCTCATCGTTACAATGATAATGGGAGTCATGGGTAGCTTCCGAACCGCCTTCCCTCTCTGGACATCTCTGGTGGCTCTCCTTCTCTACCCCCTCTCTCTTGTGTTGGTCTATGTTCTTGATTATGTCTTTGGTTGGTCATAGATCAGTCGGCATTTTGAGTTTTATTCAGGGGGTTTGTTCCTTTAAATTTCCGGATGTTTTTGCACATACTCTCTGCTGAGCCAATGTTATACAATAACTGTTCTGCTCTCTTTTTATTTGCTTCATTTTTGTGTTGGTATTGATATTGAAAGTGAAGTAAAATAATGAGCATAATTTGTTTATCGAATTATCTAATAAAAAAGTTGGGGGTCATGGTGAACTCAAAAAGAAATTATATATATATGTTCTATGCATCATTTCACGTTGAATTCTCTAAGAATTGTATGTTTCTTTTAATTATTATGTTTTGGCCTTGGTTAATTTCTCGAAGGTTT ATGGACTTGGATCATGATGATGCTGTTGACAAAATAATGAATGACTTTGATACTTCTCGTGATTCCCATGTTGATTCTAACGAGTTTGGCAATGGAATCATTAGGTGGCTTTCTCAAGTTCAAGGTTCAAGAACTGGCAGAGGTGAGGATGGTCCTCACACAATGAAGTACCTGCATAACTTTCATCAAGAAACAAAGAGAGAACACGATTTGCTGGATGTTGGGGAACAGAGCGATGAGGTCGTAGAGGGCGTCGAGGAGGGGAAGGGGGTCTTGATAAAAGCTATACTCTTCTTGTTACTTGGAACCGCCATTGCTGCTGCCTTTGCTGACCCTTTGGTTGACGTCGTACATAACTTCTCTAATGCAACTAAAATCCCTGCGTTCTTTATTTCATTTATTGCTCTGCCATTAGCAACCAACTCAAGTGAAGCAGTCTCTGCTATTATCTTTGCAAGCCGTGACAAGCGAAAAACTGCCTCATTAACATTTTCCGAGCTATATGGAGCAGTTACAATGAACAATGTCCTCTGCCTATCAGTTTTCTTGGCTCTTGTTTACATGAGAGGATTGGTTTGGAACTTTTCATCTGAAGTGCTGGTCATTCTCATCGTTACAATGATAATGGGAGTCATGGGTAGCTTCCGAACCGCCTTCCCTCTCTGGACATCTCTGGTGGCTCTCCTTCTCTACCCCCTCTCTCTTGTGTTGGTCTATGTTCTTGATTATGTCTTTGGTTGGTCATAG MDLDHDDAVDKIMNDFDTSRDSHVDSNEFGNGIIRWLSQVQGSRTGRGEDGPHTMKYLHNFHQETKREHDLLDVGEQSDEVVEGVEEGKGVLIKAILFLLLGTAIAAAFADPLVDVVHNFSNATKIPAFFISFIALPLATNSSEAVSAIIFASRDKRKTASLTFSELYGAVTMNNVLCLSVFLALVYMRGLVWNFSSEVLVILIVTMIMGVMGSFRTAFPLWTSLVALLLYPLSLVLVYVLDYVFGWS Homology
BLAST of Cucsat.G8930.T6 vs. ExPASy Swiss-Prot
Match: Q8L636 (Sodium/calcium exchanger NCL OS=Arabidopsis thaliana OX=3702 GN=NCL PE=2 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 2.6e-79 Identity = 166/250 (66.40%), Postives = 187/250 (74.80%), Query Frame = 0
BLAST of Cucsat.G8930.T6 vs. ExPASy Swiss-Prot
Match: Q5QNI2 (Sodium/calcium exchanger NCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=NCL1 PE=2 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 1.6e-76 Identity = 158/248 (63.71%), Postives = 197/248 (79.44%), Query Frame = 0
BLAST of Cucsat.G8930.T6 vs. ExPASy Swiss-Prot
Match: Q6K3R5 (Sodium/calcium exchanger NCL2 OS=Oryza sativa subsp. japonica OX=39947 GN=NCL2 PE=2 SV=2) HSP 1 Score: 272.3 bits (695), Expect = 5.3e-72 Identity = 154/251 (61.35%), Postives = 191/251 (76.10%), Query Frame = 0
BLAST of Cucsat.G8930.T6 vs. ExPASy Swiss-Prot
Match: Q5KQN0 (Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX2 PE=2 SV=2) HSP 1 Score: 47.0 bits (110), Expect = 3.6e-04 Identity = 41/139 (29.50%), Postives = 71/139 (51.08%), Query Frame = 0
BLAST of Cucsat.G8930.T6 vs. NCBI nr
Match: XP_004146032.1 (sodium/calcium exchanger NCL [Cucumis sativus] >KGN55087.1 hypothetical protein Csa_012240 [Cucumis sativus]) HSP 1 Score: 472 bits (1214), Expect = 3.03e-162 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of Cucsat.G8930.T6 vs. NCBI nr
Match: ADN33808.1 (sodium/calcium exchanger family protein [Cucumis melo subsp. melo]) HSP 1 Score: 464 bits (1194), Expect = 2.86e-159 Identity = 241/248 (97.18%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of Cucsat.G8930.T6 vs. NCBI nr
Match: XP_008463718.1 (PREDICTED: uncharacterized protein LOC103501799 [Cucumis melo] >KAA0066783.1 sodium/calcium exchanger family protein [Cucumis melo var. makuwa] >TYK27930.1 sodium/calcium exchanger family protein [Cucumis melo var. makuwa]) HSP 1 Score: 464 bits (1194), Expect = 3.35e-159 Identity = 241/248 (97.18%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of Cucsat.G8930.T6 vs. NCBI nr
Match: KAG7037430.1 (Sodium/calcium exchanger NCL1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 441 bits (1134), Expect = 1.24e-154 Identity = 227/248 (91.53%), Postives = 243/248 (97.98%), Query Frame = 0
BLAST of Cucsat.G8930.T6 vs. NCBI nr
Match: XP_038897650.1 (sodium/calcium exchanger NCL [Benincasa hispida]) HSP 1 Score: 449 bits (1156), Expect = 1.73e-153 Identity = 233/248 (93.95%), Postives = 245/248 (98.79%), Query Frame = 0
BLAST of Cucsat.G8930.T6 vs. ExPASy TrEMBL
Match: A0A0A0L3B8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628350 PE=4 SV=1) HSP 1 Score: 472 bits (1214), Expect = 1.47e-162 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of Cucsat.G8930.T6 vs. ExPASy TrEMBL
Match: E5GBG6 (Sodium/calcium exchanger family protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 464 bits (1194), Expect = 1.38e-159 Identity = 241/248 (97.18%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of Cucsat.G8930.T6 vs. ExPASy TrEMBL
Match: A0A5A7VFE4 (Sodium/calcium exchanger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001180 PE=4 SV=1) HSP 1 Score: 464 bits (1194), Expect = 1.62e-159 Identity = 241/248 (97.18%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of Cucsat.G8930.T6 vs. ExPASy TrEMBL
Match: A0A1S3CJX3 (uncharacterized protein LOC103501799 OS=Cucumis melo OX=3656 GN=LOC103501799 PE=4 SV=1) HSP 1 Score: 464 bits (1194), Expect = 1.62e-159 Identity = 241/248 (97.18%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of Cucsat.G8930.T6 vs. ExPASy TrEMBL
Match: A0A6J1IGZ1 (sodium/calcium exchanger NCL-like OS=Cucurbita maxima OX=3661 GN=LOC111476856 PE=4 SV=1) HSP 1 Score: 444 bits (1142), Expect = 9.15e-152 Identity = 230/248 (92.74%), Postives = 243/248 (97.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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