Cucsat.G8906.T8 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G8906.T8
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Sodium-bile acid cotransporter
Location	ctg1635: 1620101 .. 1622331 (-)
RNA-Seq Expression	Cucsat.G8906.T8
Synteny	Cucsat.G8906.T8

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAGACTTTCATGGTTCTTGGTGCAGGTGATGCCAATATCAGGCTTTCTTGTCAGCAAGCTTTTAAATTTGCCATCTTACTATGCAGCTGGTTTAATATTGGTTGGTTGCTGTCCTGGTGGTATGCATCAGTTGGTAGTGTCAATTATCTTTCTCATTCTATTTATTTTAACAGTTTGATCTATCTTTGGTTTCAGGAACAGCAAGCAATATAGTCACTTACATTGCAAGGTATTCTAACTTTTGAAATGCCACCATTTAGCTTCTTTCTTGTTAAATTATGTTAGAGGTTAAGAAAATTTTTATGCCTTTCCAGGGGAAATGTAGCTCTTTCTGTGCTGATGACCGCCACAAGCACTATGGCAGCCGTGGTTAGCAAGCCTCCATAGTGCTTTTGCTTTTTTCGTTTGTTTAGTTTCTAAATTCAAGTTTGCATCTTAGCATGATCTGTTTTTCTTTCGGTTTTATATAGTTCTTCTGTCGTTAAAACAGGACCTAATATCTTTGTTAGTAGAAATGACAACACATAAGAAACCATAGTTTACTCCTAAGTTCATATTTGCACAAACATAGGAAAAACCTTTAACTGAACACAACAATAAATTTTTTATCTACCACGTTACTTTTTTTTTCTCTTCAAAGATATTCGGTTTGATGAGTGTTTACTGTAGAGATGTCAGTGCTATGAGTGAGGAGTCCCTCCTTAATCCGCCTTTTGGGGAGAAAGCCCGGTTTATTTGGCTTGTTGGTGTGTGTGCAGTGTTATGGGTTTTGTGGGATGTGAGGAACAGTGGAGTGTCTGGGGGAGTGGAGAGAAACCCTAGGGAGCTTTGGTCCCTCGTTCGTTTTCATGTTTTTCTCTAGGCTTCAATTTCGTAGATTTTTGGTAATTATTCTATAGGAATGATTTTGCATAGTTGGAGCCCGTTCTTGTAGAGGGCATCTCTCCTTTTTGTGGGCTTTGTTTCCTTAGAACTGTGCATTTTTTCCTTTTTCTCAATGGAAGTGATTATTTTCGAAGTTTCATAGATATTGAAATCTAAGTTATCATTTCAATTTTACAGATCATGACCCCTTTTCTCACTGCCAAACTTGCTGGTCAATTTGTTGCTGTGGACGCAGCTGGGTTGTTAATGTCCACCCTGCAGGTGCGATTTCTAACAAACGAAAGCAACATCAATATTTTTCTTAACATTAAATTTCTCTCAAGTAACTTCCCTTTCCTTCACATACAACAGATTGTGCTTCTTCCAGTGTTGGGTGGGGCATTTTTAAACCAGTATTTCCATGGGTTGGTTAGATTTGTCTCTCCATTCATGCCCCCTATTGCTGTTGGCACTGTTGCTATTTTATGTGGACATGCAATTGCTCAGAGCTCCTCTGCTATTCGGATGTCTGGTCAGCAAGTAGTCCTGGCTGCAGCTCTTCTTCATGCTTCAGGATTTTTCTTCGGTTATGTACTTGCAAGATTGCTTGGCATTGACATTGCATCTTCTCGAACGATCTCCATTGAAGTTGGAATGCAGGTAAAGCATTTCATTTAGAATAATTGCAATGGATAGTACTTTTATGATAAATAATTAAACGCATAGCAATGTGTTAAAAGAATTTTAAATATGGGGAAAATCTATTAATGACAAACATTTATTAGAAATATGGACTATGGTAGACTTTGAGAATTGATTCAAGATTGCATTATATTTGTAAATTGTTTTGTATTGTGCTACATTTATTCATATTTGGGTCTGATCGCTGTTTTTGCAACTATCCCTTTCATTTACTTTCGGGGTATCTTAGTTGCACTCTTTGGCAAGTCTGCTGCCAAGTGTCTTACTACATAACTCAATCAGTTTCGGCATTTTTAGGTTGATCTGGTTTTTAACTTTTAACAATGAATAAATTTATGTGACAGAACTCGGTGCTAGGGGTTGTTCTTGCTAGCCAGCACTTTGGAAATCCTCTTACGGCAGTGCCCTGTGCAGTTTCAAGTGTTTGCCACTCAATCTTTGGCAGCGTTCTTGCTGGGATTTGGAGGCAAAGCAAAGACTAGGTGAAAATGATGTCTAAATTTTGTAAGCATCATTTGTGTTTTATCCTTTTGGTTTAGTAGATTTTTGTAACATTTGAATAGTTCTTGACAGGTTGTTTGCAATCATTCCATGTTTGAACTTTGTCTAATCTTGTTTTAGAATAAATCTTAAATTGTTTTTTTCCAATAAAAATAAATTTAAT

Coding sequence (CDS)

ATGACCGCCACAAGCACTATGGCAGCCGTGATCATGACCCCTTTTCTCACTGCCAAACTTGCTGGTCAATTTGTTGCTGTGGACGCAGCTGGGTTGTTAATGTCCACCCTGCAGATTGTGCTTCTTCCAGTGTTGGGTGGGGCATTTTTAAACCAGTATTTCCATGGGTTGGTTAGATTTGTCTCTCCATTCATGCCCCCTATTGCTGTTGGCACTGTTGCTATTTTATGTGGACATGCAATTGCTCAGAGCTCCTCTGCTATTCGGATGTCTGGTCAGCAAGTAGTCCTGGCTGCAGCTCTTCTTCATGCTTCAGGATTTTTCTTCGGTTATGTACTTGCAAGATTGCTTGGCATTGACATTGCATCTTCTCGAACGATCTCCATTGAAGTTGGAATGCAGAACTCGGTGCTAGGGGTTGTTCTTGCTAGCCAGCACTTTGGAAATCCTCTTACGGCAGTGCCCTGTGCAGTTTCAAGTGTTTGCCACTCAATCTTTGGCAGCGTTCTTGCTGGGATTTGGAGGCAAAGCAAAGACTAG

Protein sequence

MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRFVSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGIDIASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD

Homology

[Close]

BLAST of Cucsat.G8906.T8 vs. ExPASy Swiss-Prot
Match: Q93YR2 (Probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BASS1 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.0e-72
Identity = 144/177 (81.36%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 1   MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 60
           MTA ST++AVIMTP LTAKLA Q++ VDA GLLMSTLQ+VLLPVL GAFLNQYF  LV+F
Sbjct: 218 MTAASTVSAVIMTPLLTAKLAKQYITVDALGLLMSTLQVVLLPVLAGAFLNQYFKKLVKF 277

Query: 61  VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID 120
           VSP MPPIAVGTVAILCG+AI Q++SAI MSG+QVVLA+ LLH SGF FGY+ +R+LGID
Sbjct: 278 VSPVMPPIAVGTVAILCGYAIGQNASAILMSGKQVVLASCLLHISGFLFGYLFSRILGID 337

Query: 121 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQS 178
           +ASSRTISIEVGMQNSVLGVVLA+QHFGNPLTAVPCAVSSVCHSI GSVLAGIWR+S
Sbjct: 338 VASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSILGSVLAGIWRRS 394

[Close]

BLAST of Cucsat.G8906.T8 vs. ExPASy Swiss-Prot
Match: Q7XVB3 (Probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BASS1 PE=2 SV=2)

HSP 1 Score: 247.3 bits (630), Expect = 1.3e-64
Identity = 131/175 (74.86%), Postives = 151/175 (86.29%), Query Frame = 0


Query: 1   MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 60
           MTA ST AA  +TP LT+KLAGQ+VAVD  GL +ST Q+VL PVL GA LNQY +GLV+ 
Sbjct: 223 MTAASTFAAAFLTPLLTSKLAGQYVAVDPMGLFVSTSQVVLAPVLLGALLNQYCNGLVQL 282

Query: 61  VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID 120
           VSP MP IAV TVA+LCG+AIAQ++SAI  SG QVV++   LHASGFFFGYVL+R +GID
Sbjct: 283 VSPLMPFIAVATVAVLCGNAIAQNASAILSSGLQVVMSVCWLHASGFFFGYVLSRTIGID 342

Query: 121 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWR 176
           I+SSRTISIEVGMQNSVLGVVLAS+HFGNPLTAVPCAVSSVCHS++GS+LAGIWR
Sbjct: 343 ISSSRTISIEVGMQNSVLGVVLASKHFGNPLTAVPCAVSSVCHSVYGSLLAGIWR 397

[Close]

BLAST of Cucsat.G8906.T8 vs. ExPASy Swiss-Prot
Match: Q5VRB2 (Probable sodium/metabolite cotransporter BASS2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BASS2 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.1e-34
Identity = 83/175 (47.43%), Postives = 109/175 (62.29%), Query Frame = 0


Query: 1   MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 60
           MT  ST+ A++MTP LT  LAGQ V VDAAGL +ST Q+VLLP + G   ++YF      
Sbjct: 231 MTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLLPTIVGVLAHEYFPKFTER 290

Query: 61  VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID 120
           +    P I V    +LC   I Q S  ++  G Q+++  ALLH + F  GY L+++    
Sbjct: 291 IISITPLIGVLLTTLLCASPIGQVSEVLKAQGGQLIIPVALLHVAAFALGYWLSKVSSFG 350

Query: 121 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWR 176
            ++SRTISIE GMQ+S LG +LA +HF NPL AVP AVS VC ++ GS LA  WR
Sbjct: 351 ESTSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSALAVFWR 405

[Close]

BLAST of Cucsat.G8906.T8 vs. ExPASy Swiss-Prot
Match: Q1EBV7 (Sodium/pyruvate cotransporter BASS2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BASS2 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.6e-33
Identity = 83/175 (47.43%), Postives = 109/175 (62.29%), Query Frame = 0


Query: 1   MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 60
           MT  ST+ A+IMTP LT  LAGQ V VDAAGL +ST Q+VL+P + G   N++F      
Sbjct: 222 MTTCSTIGAIIMTPLLTKLLAGQLVPVDAAGLALSTFQVVLVPTIIGVLANEFFPKFTSK 281

Query: 61  VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID 120
           +    P I V    +LC   I Q +  ++  G Q++L  ALLHA+ F  GY +++     
Sbjct: 282 IITVTPLIGVILTTLLCASPIGQVADVLKTQGAQLILPVALLHAAAFAIGYWISK-FSFG 341

Query: 121 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWR 176
            ++SRTISIE GMQ+S LG +LA +HF NPL AVP AVS VC ++ GS LA  WR
Sbjct: 342 ESTSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSGLAVFWR 395

[Close]

BLAST of Cucsat.G8906.T8 vs. ExPASy Swiss-Prot
Match: Q8ZKL0 (Pantothenate precursors transporter PanS OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=panS PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.5e-23
Identity = 66/174 (37.93%), Postives = 102/174 (58.62%), Query Frame = 0


Query: 1   MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 60
           +++ ST+  V+ TP LT       + VD  G+L+S LQIV++P+  G  ++  F  +V+ 
Sbjct: 125 ISSVSTLVGVVATPLLTRLYVDAHIQVDVMGMLLSILQIVVIPITLGLVIHHLFPRVVKV 184

Query: 61  VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID 120
           V P++P  ++  +  +    +A S+S I   G  V++A  L +  G   GY   RL G D
Sbjct: 185 VKPYLPAFSMVCILAIISAVVAGSASHIASVGFMVIIAVILHNTLGLLGGYWGGRLFGFD 244

Query: 121 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIW 175
            ++ RT++IEVGMQNS L   L   +FG PL A+P A+ SV H++ GS+LAG W
Sbjct: 245 ESTCRTLAIEVGMQNSGLAAALGKIYFG-PLAALPGALFSVWHNLSGSLLAGYW 297

[Close]

BLAST of Cucsat.G8906.T8 vs. NCBI nr
Match: XP_004146013.1 (probable sodium/metabolite cotransporter BASS1, chloroplastic [Cucumis sativus] >KGN55025.1 hypothetical protein Csa_012383 [Cucumis sativus])

HSP 1 Score: 332 bits (850), Expect = 1.01e-110
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 60
           MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF
Sbjct: 236 MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 295

Query: 61  VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID 120
           VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID
Sbjct: 296 VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID 355

Query: 121 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD 179
           IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD
Sbjct: 356 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD 414

[Close]

BLAST of Cucsat.G8906.T8 vs. NCBI nr
Match: XP_008463794.1 (PREDICTED: LOW QUALITY PROTEIN: probable sodium/metabolite cotransporter BASS1, chloroplastic [Cucumis melo] >TYK27850.1 putative sodium/metabolite cotransporter BASS1 [Cucumis melo var. makuwa])

HSP 1 Score: 330 bits (845), Expect = 5.45e-110
Identity = 177/179 (98.88%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 60
           MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF
Sbjct: 234 MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 293

Query: 61  VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID 120
           VSPFMPPIAVGTVA+LCGHAIAQSSSAIR+SGQQVVLAAALLHASGFFFGYVLARLLGID
Sbjct: 294 VSPFMPPIAVGTVAVLCGHAIAQSSSAIRISGQQVVLAAALLHASGFFFGYVLARLLGID 353

Query: 121 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD 179
           IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD
Sbjct: 354 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD 412

[Close]

BLAST of Cucsat.G8906.T8 vs. NCBI nr
Match: KAA0066700.1 (putative sodium/metabolite cotransporter BASS1 [Cucumis melo var. makuwa])

HSP 1 Score: 330 bits (845), Expect = 5.80e-110
Identity = 177/179 (98.88%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 60
           MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF
Sbjct: 236 MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 295

Query: 61  VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID 120
           VSPFMPPIAVGTVA+LCGHAIAQSSSAIR+SGQQVVLAAALLHASGFFFGYVLARLLGID
Sbjct: 296 VSPFMPPIAVGTVAVLCGHAIAQSSSAIRISGQQVVLAAALLHASGFFFGYVLARLLGID 355

Query: 121 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD 179
           IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD
Sbjct: 356 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD 414

[Close]

BLAST of Cucsat.G8906.T8 vs. NCBI nr
Match: XP_038898003.1 (probable sodium/metabolite cotransporter BASS1, chloroplastic [Benincasa hispida])

HSP 1 Score: 314 bits (805), Expect = 7.10e-104
Identity = 169/179 (94.41%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 1   MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 60
           MTA STMAAVIMTPFLTAKLAGQ+VAVDAAGLLMSTLQIVLLPVL GAFLNQYFHGLV+F
Sbjct: 238 MTAASTMAAVIMTPFLTAKLAGQYVAVDAAGLLMSTLQIVLLPVLVGAFLNQYFHGLVKF 297

Query: 61  VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID 120
           VSPFMPPIAV TVAILCG+AIAQSSSAI MSGQQVVLAAALLHASGFFFGYVLARLLGID
Sbjct: 298 VSPFMPPIAVSTVAILCGNAIAQSSSAILMSGQQVVLAAALLHASGFFFGYVLARLLGID 357

Query: 121 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD 179
           +ASSRTISIEVGMQNSVLGVVLA+QHFGNPLTAVPCAVSSVCHS+FGSVLAGIWRQSKD
Sbjct: 358 VASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSVFGSVLAGIWRQSKD 416

[Close]

BLAST of Cucsat.G8906.T8 vs. NCBI nr
Match: XP_022133119.1 (probable sodium/metabolite cotransporter BASS1, chloroplastic [Momordica charantia])

HSP 1 Score: 306 bits (785), Expect = 5.23e-101
Identity = 163/178 (91.57%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 1   MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 60
           MTA ST+AAVIMTPFLTAKLAGQFVAVDAAGLL+STLQIVLLPVL GAFLNQYFHGLVR 
Sbjct: 226 MTAASTVAAVIMTPFLTAKLAGQFVAVDAAGLLLSTLQIVLLPVLAGAFLNQYFHGLVRL 285

Query: 61  VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID 120
           VSP MPPIAVGTVA+LCG+AIAQSSSAI MSGQQVVLAA+LLHASGFFFGYVLAR+LGID
Sbjct: 286 VSPLMPPIAVGTVAVLCGNAIAQSSSAILMSGQQVVLAASLLHASGFFFGYVLARMLGID 345

Query: 121 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSK 178
           ++SSRTISIEVGMQNSVLGVVLA+QHFGNPLTAVPCAVSSVCHSIFGS+LAGIWRQSK
Sbjct: 346 VSSSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSIFGSILAGIWRQSK 403

[Close]

BLAST of Cucsat.G8906.T8 vs. ExPASy TrEMBL
Match: A0A0A0KZF9 (Sodium-bile acid cotransporter OS=Cucumis sativus OX=3659 GN=Csa_4G622840 PE=3 SV=1)

HSP 1 Score: 332 bits (850), Expect = 4.90e-111
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 60
           MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF
Sbjct: 236 MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 295

Query: 61  VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID 120
           VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID
Sbjct: 296 VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID 355

Query: 121 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD 179
           IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD
Sbjct: 356 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD 414

[Close]

BLAST of Cucsat.G8906.T8 vs. ExPASy TrEMBL
Match: A0A5D3DX81 (Putative sodium/metabolite cotransporter BASS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00270 PE=3 SV=1)

HSP 1 Score: 330 bits (845), Expect = 2.64e-110
Identity = 177/179 (98.88%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 60
           MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF
Sbjct: 234 MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 293

Query: 61  VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID 120
           VSPFMPPIAVGTVA+LCGHAIAQSSSAIR+SGQQVVLAAALLHASGFFFGYVLARLLGID
Sbjct: 294 VSPFMPPIAVGTVAVLCGHAIAQSSSAIRISGQQVVLAAALLHASGFFFGYVLARLLGID 353

Query: 121 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD 179
           IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD
Sbjct: 354 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD 412

[Close]

BLAST of Cucsat.G8906.T8 vs. ExPASy TrEMBL
Match: A0A1S3CK43 (LOW QUALITY PROTEIN: probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501847 PE=3 SV=1)

HSP 1 Score: 330 bits (845), Expect = 2.64e-110
Identity = 177/179 (98.88%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 60
           MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF
Sbjct: 234 MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 293

Query: 61  VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID 120
           VSPFMPPIAVGTVA+LCGHAIAQSSSAIR+SGQQVVLAAALLHASGFFFGYVLARLLGID
Sbjct: 294 VSPFMPPIAVGTVAVLCGHAIAQSSSAIRISGQQVVLAAALLHASGFFFGYVLARLLGID 353

Query: 121 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD 179
           IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD
Sbjct: 354 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD 412

[Close]

BLAST of Cucsat.G8906.T8 vs. ExPASy TrEMBL
Match: A0A5A7VHN1 (Putative sodium/metabolite cotransporter BASS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G00330 PE=3 SV=1)

HSP 1 Score: 330 bits (845), Expect = 2.81e-110
Identity = 177/179 (98.88%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 60
           MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF
Sbjct: 236 MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 295

Query: 61  VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID 120
           VSPFMPPIAVGTVA+LCGHAIAQSSSAIR+SGQQVVLAAALLHASGFFFGYVLARLLGID
Sbjct: 296 VSPFMPPIAVGTVAVLCGHAIAQSSSAIRISGQQVVLAAALLHASGFFFGYVLARLLGID 355

Query: 121 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD 179
           IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD
Sbjct: 356 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSKD 414

[Close]

BLAST of Cucsat.G8906.T8 vs. ExPASy TrEMBL
Match: A0A6J1BV26 (probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005764 PE=3 SV=1)

HSP 1 Score: 306 bits (785), Expect = 2.53e-101
Identity = 163/178 (91.57%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 1   MTATSTMAAVIMTPFLTAKLAGQFVAVDAAGLLMSTLQIVLLPVLGGAFLNQYFHGLVRF 60
           MTA ST+AAVIMTPFLTAKLAGQFVAVDAAGLL+STLQIVLLPVL GAFLNQYFHGLVR 
Sbjct: 226 MTAASTVAAVIMTPFLTAKLAGQFVAVDAAGLLLSTLQIVLLPVLAGAFLNQYFHGLVRL 285

Query: 61  VSPFMPPIAVGTVAILCGHAIAQSSSAIRMSGQQVVLAAALLHASGFFFGYVLARLLGID 120
           VSP MPPIAVGTVA+LCG+AIAQSSSAI MSGQQVVLAA+LLHASGFFFGYVLAR+LGID
Sbjct: 286 VSPLMPPIAVGTVAVLCGNAIAQSSSAILMSGQQVVLAASLLHASGFFFGYVLARMLGID 345

Query: 121 IASSRTISIEVGMQNSVLGVVLASQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRQSK 178
           ++SSRTISIEVGMQNSVLGVVLA+QHFGNPLTAVPCAVSSVCHSIFGS+LAGIWRQSK
Sbjct: 346 VSSSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSIFGSILAGIWRQSK 403

The following BLAST results are available for this feature:

BLAST of Cucsat.G8906.T8 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93YR2	1.0e-72	81.36	Probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Arabidopsis tha...	[more]
Q7XVB3	1.3e-64	74.86	Probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Oryza sativa su...	[more]
Q5VRB2	1.1e-34	47.43	Probable sodium/metabolite cotransporter BASS2, chloroplastic OS=Oryza sativa su...	[more]
Q1EBV7	4.6e-33	47.43	Sodium/pyruvate cotransporter BASS2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
Q8ZKL0	2.5e-23	37.93	Pantothenate precursors transporter PanS OS=Salmonella typhimurium (strain LT2 /...	[more]

BLAST of Cucsat.G8906.T8 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146013.1	1.01e-110	100.00	probable sodium/metabolite cotransporter BASS1, chloroplastic [Cucumis sativus] ...	[more]
XP_008463794.1	5.45e-110	98.88	PREDICTED: LOW QUALITY PROTEIN: probable sodium/metabolite cotransporter BASS1, ...	[more]
KAA0066700.1	5.80e-110	98.88	putative sodium/metabolite cotransporter BASS1 [Cucumis melo var. makuwa]	[more]
XP_038898003.1	7.10e-104	94.41	probable sodium/metabolite cotransporter BASS1, chloroplastic [Benincasa hispida...	[more]
XP_022133119.1	5.23e-101	91.57	probable sodium/metabolite cotransporter BASS1, chloroplastic [Momordica charant...	[more]

BLAST of Cucsat.G8906.T8 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZF9	4.90e-111	100.00	Sodium-bile acid cotransporter OS=Cucumis sativus OX=3659 GN=Csa_4G622840 PE=3 S...	[more]
A0A5D3DX81	2.64e-110	98.88	Putative sodium/metabolite cotransporter BASS1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CK43	2.64e-110	98.88	LOW QUALITY PROTEIN: probable sodium/metabolite cotransporter BASS1, chloroplast...	[more]
A0A5A7VHN1	2.81e-110	98.88	Putative sodium/metabolite cotransporter BASS1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1BV26	2.53e-101	91.57	probable sodium/metabolite cotransporter BASS1, chloroplastic OS=Momordica chara...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038770	Sodium/solute symporter superfamily	GENE3D	1.20.1530.20		coord: 1..177 e-value: 5.9E-46 score: 158.9
IPR002657	Bile acid:sodium symporter/arsenical resistance protein Acr3	PFAM	PF01758	SBF	coord: 1..81 e-value: 2.0E-7 score: 30.9
None	No IPR available	PANTHER	PTHR10361:SF64	SODIUM/METABOLITE COTRANSPORTER BASS1, CHLOROPLASTIC-RELATED	coord: 1..178
IPR004710	Bile acid:sodium symporter	PANTHER	PTHR10361	SODIUM-BILE ACID COTRANSPORTER	coord: 1..178

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G8906	Cucsat.G8906	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G8906.T8.E1	Cucsat.G8906.T8.E1	exon
Cucsat.G8906.T8.E2	Cucsat.G8906.T8.E2	exon
Cucsat.G8906.T8.E3	Cucsat.G8906.T8.E3	exon
Cucsat.G8906.T8.E4	Cucsat.G8906.T8.E4	exon
Cucsat.G8906.T8.E5	Cucsat.G8906.T8.E5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G8906.T8.C4	Cucsat.G8906.T8.C4	CDS
Cucsat.G8906.T8.C3	Cucsat.G8906.T8.C3	CDS
Cucsat.G8906.T8.C2	Cucsat.G8906.T8.C2	CDS
Cucsat.G8906.T8.C1	Cucsat.G8906.T8.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G8906.T8	Cucsat.G8906.T8-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098717	pantothenate import across plasma membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane