Cucsat.G8875.T1 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGCTTTTAGGTGAATCGATTAGATAGAGAGATGAGTAGTTGTATTTGTTGAGAAAAATCAAGTACCATAGTCCAGTGTCCTCTTTTGGGCATTATTGATCACTACCTTTAGTGGTCCTCCTCTGACATTGTTCTACTTTTTCCTTTTTCCTTATTGCTACAAAAGCTTTCAAGATCCCTTGTGAAATCCATAGCAACAACCTACAAGGGTGGCTTCACCATTCTGCTTTGTGCTTCTTTCATCAGAACCAAATAAACAATGCTATTTTTGCAGAAGACGGCTTTTACTTTATCCATCCCTCCAAGTTCAATACTTTTTATCTTTCTTCTTCTCACATTTCAACAAGTCAGCTCATCTCAACAGCACAACAAAAACGAAGACATGATTCATTCAAGCAAGAAAGACAACAGCCAAAAGGTTTCCATTTCTTCTTTCAGTTCATATTTTACATGTAATGAGAAAAGTGGTTTGTAATGTAATTAAAGCTGAAATTGATTACTGGTTATATAATGGCAACAGATGAGTTCCAGCCTATTGTTTGATATCACACTCCATGGATTTCTCCTATGGGCTTCAATGGGATTCCTTATGCCTGTTGGGATTCTTGTTATCAGAATGTCTAACAGAGAGCAATGTGGAAGAAAGCTGAAATATTACTTTTACATTCATACTATTCTACAGGCAAGTTCATCTAATCTTTTCTAGCAATATCATAATAGAATGAAAAACTGAGCCGGCCGAACAAAACTAATCGAACTGAGGAGAGGAGAGGTTAGTGTCAGTTTAAACAATTTTAAAAAATATTCAAAGACTTAAATCAACCGATCTTTTTTGTACTCGTTCATTACAGGAATCGGTTTGAACATTTAACTAAGTCGATCACAGTCGATTCAGTGTCGGTTTAGTCGGAAAACCAAACCCAACAAACCGATACTCACCCCTAAACAATACACTCAAATACTAAAATGAACGTTCTTTTTTGTTTTTGTTATTGTTTACATAAAGAAGAATCCTTTATAACTAAACAAACAATAAATGTAGAAGCATCATTAAGGCAATTAACTTTAACTTTTTATTAAACAAGCAAACAATCCACTTTTTCTTGCTCTACTTTATGAAATTAATTATAGTTAAAGAGAAACTATAAGGGTCCTGATTCTGAATATCTTATACATGAATATACTTGTGAAGAAAGAAAAGACAGGCATCATCACATCATAACTAATTAGAAACTCATAGCCAAATATCTGTAATGTTGAAAATCTAGCAGGTGTATGGATTATAATATTAGAGTTAGGTGAGATTTAGCTCTGGAAAGTCAAAATGATACAAAATTTGTATGACAGTTGAAGGATTTTGATTATACTTCAACCACAAAGATGGGGTCCAATTTGATGAATCTCACTTCAAGATCAAACAGTCGTGGTTCAAGTGATTATAATGCTAGTATTTTTCATTCTCACAATGAGTTGTTAAATCAGCCATTAATATCATATTATCTTGATTTGATTATGTTGAACAGATAGTGTCTGTATTACTAGTCACAGCAGGAGCAGTCATGTCTATCAAGAAATTCAACAATGCTTTCAATAATAATCACCAAAGGATAGGGATTGGCTTGTATGGGATGATCTGGTTACAGGGGTTGATTGGAATTGTAAGGCCAAAAAGGTAAACTTTCATATTTCATATGATTATAAAGCCTCGCTAGTTTCTTGGAAAGAGTCATTAAAGTCCCGTTTGATAACAATTTTATTTTTTAAAATTAAGTTTCACACTATCTTGTTCTATATTCAAAACCATTCTAAGACTAAGAGAGCGCTTGAGTTATAATGATATGTGTTTGGACTATAAACTATTTTAGTATGATCAGAAGTAAATAATAAATATTGTAGCAAAGAATAATAAAAGATGAATGCCAAATAGTAATAACAAATAAAACGCTTTGAAATAGTGTTTATTGTGAAATTTTTAAATAGGATTTAATGTATAATAGTCTTAGTCTTACTTAGTTCTGACTCGAAACACCCTTAAATGTTTGTTCGAGCCTAATTTTGGATTGATGAAGAATATTGGTTGTTGTAAAAATTGGTCAATGCATACAAGAAAAGACTTGAACAAAAACAACTTTTGCGAACCCTATTCATCAATCATGTCTCTAATAAATCTTTTGTTAAAAAATACTCTGCATATCAACTTATACCCCTAAACTTTAGATTTTTTTCAATTTAAACTATGATTTTTCATTAATTTACCCTTTCCAATTTTTGTTTAACCAATACTACGTTAAACTTATAATTCGAGTCAATTAAACTCCAAAATTTCAATAAGCCAATCAACTTAGACCCTTCGTTATGATTACCTTTGAAAATCATCAATATATTGATGCACAAATACATCTAAGCTTCTCTTCAAATGTAAAATTTTACAAAATTAGATTATTAGAGTGAATGTATGGACACAATTCTCCAATAAAAAAAATATAATTAGGAGTCTATTGATTCATTAACGTATGTCTAGGAGTTTACACACCAAAATGTAATAGAGAGGATACACTTGCAAAACTTCAAAGTTGGAATTAATTCAACCTCTAAGGTTGAGGGGTACAGATGAACATTTCAAAACCAAACAAACAAACGAGCAAAGTTTTCTTACTCCAAAATCAACTGCAGATTATCTAGATGGAGTAAACAGTCAGGACGATATTGATATCGACTTCTAAACTCTAAATAAACTCTTCATTGACTGTTGCAGGGGGTCTAAAACAAGAAGCGTATGGTTTTTCATACATTGGATGCTTGGGACAGCAGTATCTCTGCTAGGAGTTTTCAATGTATACTCAGGATTATTTGCATACCATGAGAAAACATCTCAAAGTATAAGAATTTGGACTATAATTTTTAGTGTTGAAATTTCTTTGATATCATTCTTTTACCTATTCCAAGACAAAGTAGAGTATATACAAAAGCAAGGAGTTACTTTGGGGAATGATTTGGTAGTACTGTCTCCAAATGACAAGCAAAAGGAACTTCCTACTGATCCATGCTGAAGAATTAAGGAGTAAATAAAATAGAGTTGTCAAAACGTTGCTTCTTTCTTTCTTTTTTTTTTTCTCTCTTTTCACTAACATGAGATTGGTGTTATTCTTCTTACTCATTTCTCTCTTCTTCTTGGGATTTGTATAGGAAAAGAGTGTGGTCTTTGTAAGAAATGGAAAATCTTTTGGGTTTGGAGGAGATGTTTTTTTGATAAGACAATGTGAGTTTTTTTCTGTTTTCTATTACAGATTTTCACATAATGGATACAAAGTTTTCTTTTTTTGAAGAATAAAGATGTGAGCACAGATACTGATATTGCTCTTTTAATAATATCACAAGA ATGCTATTTTTGCAGAAGACGGCTTTTACTTTATCCATCCCTCCAAGTTCAATACTTTTTATCTTTCTTCTTCTCACATTTCAACAAGTCAGCTCATCTCAACAGCACAACAAAAACGAAGACATGATTCATTCAAGCAAGAAAGACAACAGCCAAAAGATGAGTTCCAGCCTATTGTTTGATATCACACTCCATGGATTTCTCCTATGGGCTTCAATGGGATTCCTTATGCCTGTTGGGATTCTTGTTATCAGAATGTCTAACAGAGAGCAATGTGGAAGAAAGCTGAAATATTACTTTTACATTCATACTATTCTACAGATAGTGTCTGTATTACTAGTCACAGCAGGAGCAGTCATGTCTATCAAGAAATTCAACAATGCTTTCAATAATAATCACCAAAGGATAGGGATTGGCTTGTATGGGATGATCTGGTTACAGGGGTTGATTGGAATTGTAAGGCCAAAAAGGGGGTCTAAAACAAGAAGCGTATGGTTTTTCATACATTGGATGCTTGGGACAGCAGTATCTCTGCTAGGAGTTTTCAATGTATACTCAGGATTATTTGCATACCATGAGAAAACATCTCAAAGTATAAGAATTTGGACTATAATTTTTAGTGTTGAAATTTCTTTGATATCATTCTTTTACCTATTCCAAGACAAAGTAGAGTATATACAAAAGCAAGGAGTTACTTTGGGGAATGATTTGGTAGTACTGTCTCCAAATGACAAGCAAAAGGAACTTCCTACTGATCCATGCTGA MLFLQKTAFTLSIPPSSILFIFLLLTFQQVSSSQQHNKNEDMIHSSKKDNSQKMSSSLLFDITLHGFLLWASMGFLMPVGILVIRMSNREQCGRKLKYYFYIHTILQIVSVLLVTAGAVMSIKKFNNAFNNNHQRIGIGLYGMIWLQGLIGIVRPKRGSKTRSVWFFIHWMLGTAVSLLGVFNVYSGLFAYHEKTSQSIRIWTIIFSVEISLISFFYLFQDKVEYIQKQGVTLGNDLVVLSPNDKQKELPTDPC Homology
BLAST of Cucsat.G8875.T1 vs. ExPASy Swiss-Prot
Match: Q0WPS2 (Cytochrome b561 domain-containing protein At4g18260 OS=Arabidopsis thaliana OX=3702 GN=At4g18260 PE=2 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 1.7e-52 Identity = 114/264 (43.18%), Postives = 166/264 (62.88%), Query Frame = 0
BLAST of Cucsat.G8875.T1 vs. ExPASy Swiss-Prot
Match: O80854 (Cytochrome b561 domain-containing protein At2g30890 OS=Arabidopsis thaliana OX=3702 GN=At2g30890 PE=2 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.2e-50 Identity = 100/224 (44.64%), Postives = 154/224 (68.75%), Query Frame = 0
BLAST of Cucsat.G8875.T1 vs. ExPASy Swiss-Prot
Match: Q9SV71 (Cytochrome b561 and DOMON domain-containing protein At4g12980 OS=Arabidopsis thaliana OX=3702 GN=At4g12980 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.5e-10 Identity = 39/134 (29.10%), Postives = 66/134 (49.25%), Query Frame = 0
BLAST of Cucsat.G8875.T1 vs. ExPASy Swiss-Prot
Match: Q8VYH6 (Cytochrome b561 and DOMON domain-containing protein At4g17280 OS=Arabidopsis thaliana OX=3702 GN=At4g17280 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.7e-09 Identity = 41/136 (30.15%), Postives = 64/136 (47.06%), Query Frame = 0
BLAST of Cucsat.G8875.T1 vs. NCBI nr
Match: XP_004144633.1 (cytochrome b561 domain-containing protein At4g18260 [Cucumis sativus] >KGN54933.1 hypothetical protein Csa_012051 [Cucumis sativus]) HSP 1 Score: 501 bits (1290), Expect = 9.29e-179 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
BLAST of Cucsat.G8875.T1 vs. NCBI nr
Match: XP_008465444.1 (PREDICTED: cytochrome b561 domain-containing protein At4g18260-like [Cucumis melo]) HSP 1 Score: 481 bits (1237), Expect = 1.12e-170 Identity = 242/254 (95.28%), Postives = 249/254 (98.03%), Query Frame = 0
BLAST of Cucsat.G8875.T1 vs. NCBI nr
Match: XP_038897321.1 (cytochrome b561 domain-containing protein At4g18260-like [Benincasa hispida] >XP_038897322.1 cytochrome b561 domain-containing protein At4g18260-like [Benincasa hispida]) HSP 1 Score: 447 bits (1149), Expect = 3.33e-157 Identity = 229/259 (88.42%), Postives = 242/259 (93.44%), Query Frame = 0
BLAST of Cucsat.G8875.T1 vs. NCBI nr
Match: XP_022936959.1 (cytochrome b561 domain-containing protein At4g18260-like [Cucurbita moschata]) HSP 1 Score: 436 bits (1120), Expect = 8.74e-153 Identity = 226/259 (87.26%), Postives = 239/259 (92.28%), Query Frame = 0
BLAST of Cucsat.G8875.T1 vs. NCBI nr
Match: XP_023535975.1 (cytochrome b561 domain-containing protein At4g18260-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 434 bits (1116), Expect = 3.56e-152 Identity = 225/259 (86.87%), Postives = 238/259 (91.89%), Query Frame = 0
BLAST of Cucsat.G8875.T1 vs. ExPASy TrEMBL
Match: A0A0A0KZN5 (Cytochrome b561 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G608090 PE=4 SV=1) HSP 1 Score: 501 bits (1290), Expect = 4.50e-179 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
BLAST of Cucsat.G8875.T1 vs. ExPASy TrEMBL
Match: A0A1S3CNW7 (cytochrome b561 domain-containing protein At4g18260-like OS=Cucumis melo OX=3656 GN=LOC103503052 PE=4 SV=1) HSP 1 Score: 481 bits (1237), Expect = 5.41e-171 Identity = 242/254 (95.28%), Postives = 249/254 (98.03%), Query Frame = 0
BLAST of Cucsat.G8875.T1 vs. ExPASy TrEMBL
Match: A0A6J1F9S9 (cytochrome b561 domain-containing protein At4g18260-like OS=Cucurbita moschata OX=3662 GN=LOC111443391 PE=4 SV=1) HSP 1 Score: 436 bits (1120), Expect = 4.23e-153 Identity = 226/259 (87.26%), Postives = 239/259 (92.28%), Query Frame = 0
BLAST of Cucsat.G8875.T1 vs. ExPASy TrEMBL
Match: A0A6J1II03 (cytochrome b561 domain-containing protein At4g18260-like OS=Cucurbita maxima OX=3661 GN=LOC111477093 PE=4 SV=1) HSP 1 Score: 433 bits (1113), Expect = 4.93e-152 Identity = 224/259 (86.49%), Postives = 239/259 (92.28%), Query Frame = 0
BLAST of Cucsat.G8875.T1 vs. ExPASy TrEMBL
Match: A0A6J1FI32 (cytochrome b561 domain-containing protein At4g18260-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445961 PE=4 SV=1) HSP 1 Score: 415 bits (1066), Expect = 5.96e-145 Identity = 218/261 (83.52%), Postives = 236/261 (90.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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