Cucsat.G8629.T3 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAGTTTGCCCTCCCCGCCGAAAATGGCAACGTCGAAGCTCTGTACTCACCTTCGCCGTCTTCGTCCATCTCGTTTTTACTCCATCTCTTCCCTTTCTTCTCCTCTGCCCTTTCGACTTCACGAAGCTCACACACTCTCAAGCTCTCACCATCAACCATTCACCACTCCCTCCCATCGTTTTGATCCTCATATAAGCTCCCTTAGTGCTTTCACCGCATTCTCCTCTCGGTCCTTCTGGACTCGTTCAAACGACGATTCAGAGTTCGACCGGATTGCCCATTACGGTGTTGAATCAAGCCACCTCTCGAACGACGATACGGGAATTCAAGACTTGGAACTTGGAGGAGTTGTTGAAGAAGTCATTGGTGCGACTGCGGTGGAGAATTCGATTTTACCAATTCAGCAACTTACTTCGATTCTGGATGGGTTCCATCAGTATACCGGTATGCCCTGGTGAGCATTTCAATGCTTCTCATATGATTCTGGAGGAATACTTAGAAGAGTGTACGGAGCGTGTGGATTTTGATCTTTTCGATTTCTATTTTGAACATCTTGAATCGTGTTTTAGTCATAGTGTATTTCTTTGATCTTATATCGGCATGTCATGGCCAAATTAACGAGCTCTGTCTTTGATGGGGTGAAAGTTTTAGTATAGTGTTGCATTTTCTTAATGCCAGTTGAGCTGCTATGCTCACTCTGGCATTTCCAACTCCATATTATGTGTTCTCAATTGTTGTTAGCTTTGTTATCATTAGTTAGTTTGATCAATCTTTTGGTAATCAGTTATTGCAGACTTTCTTTTGTCATGTAAGTTGGCCGAGTAATTTTCTGTTACTTTCCTCAAGCTCATCTATATAAGAGAGTTTCTATTACCGCCTTGTATTGTCATGGATAACAATAAAATATTCATCCCATTACATTGTTGTACTCCGCGTGTATACTTGAGTTAGATGCACAAAAATTTAATGTTCTCGATGTCTAACAGTTTGATCTTTTTGGGGTGAGGAAAGATTGTGGACGGTGGTTTCTAGTAAGACTGACAGCTTCGATTTTGGTTTTCTTGGAAATATTAAAATTTTAATTTAGTTCGCTGATCCTTTCAATTTCAGGTGGGCAGTTATTGCTTCATCAACTTTAGCTCTCAGATTTACGTTGCTTCCCATACTCATTGTTCAACTCAACAAGTTGAAAAGGATTGGAGAATTATTTCCAAAGTGTAAGTTCCAACGTAACGAATTGATTTATTTCTCTTTACTGCTTGACTCATTAAAGTTTTTGACTTGGGTTGTTGAACTCCTGAATGAATAAAGGAAAAGTATAATTGTATTGTTAATTATGGTGGAACTCCAGCAGTCGTAATTAGGCTGACGGGTGATTATGTAAATTTTTTTTTGAAGAATCACACACTCTTGGATGAAACCACATTTTTATCCTCTCTCAATAACAACAAAAGGAAAAACCAACCAAAGGCTAGGTTGAAGAAAACATACTGAAGGAACACTTGCATACTATAAACAGAAAATCAATCCTGTTAGCTGGCCATCGTGATGTTTGTGCTGTGTTTGCAAAGTTCCTCCTCCATCCGCCTTTTATAGACAAAGGCCGTTTTTTGTAGTTTGGGTGGTTGGTGTGGCATGCTTGGTGGGGGAGAGGAATGATAGAGTTTTAATAGGGAGAGATCGGGACCCTTGTGAGGTTTGGTCTTAGTTAGATTTCATGTTTCCCTTTTGGCCTCAGTTTGAAAGCTTTTTTGTAACTATTCACTCAACATTTTACTTACTTGAACTCCTTCCTTTAGTTGGAGTGTGTTGGTGGGCTTGTTTTTTCGTATGCCCTTGTATTCCTTCTTTTTTTCTCAACGAAAGCTGTTTTCATAAAAAGAAAAGAAAATTGATACAATTATTAGTTTGGAGTTTTAATTTATACATCCCCAAAGTTCAGGGCATAAGTTGTATTTTCCCTTTAACTTTATTTCCAGTTAGACTGATTTAAAGATATTCACGCACTCACACACAATAATGCAATTTAATTGTTCACAGTTAAATTGTTAATATAATCATTACTACCTTTTTTTTTTTTGCTTTTTTAACACAATCACTTTAGTTTGACTTTTATTTGCATTTCTCAAAGTGCCACCTCCACTGCCACCACCTCTTTCGGGACGGAGTTACATCGACCAAATTTCTCTTTTCCGAAAAGAAAGAAAGGCAATTGGATGCCCCTCATTTCTGTGGTTCGCTGCATACTTTTTCATTCAGGTGATTCTAATCTAATAAGAAACTATATTATTTTTGGAAAAATTTTCTATTTTCTCATGTGTGGGTTCCACCAAATTTCTATTTTACACTATTTTTATTGTCTTTGTAAATGTTAATCATCCAGTGTCTATTTTTCTAGAAGTTCCAACAATGTTTGAAAACCTCATGATCTTTCTTGATGAGCATGGGAGAAGGTTAGTCAGGGGTAATCCTTCAATTGAAATACTCAACAAAGTATTCAAGAACGTTTGTTTTTTTTCTGGATAAGGATTATGGACTTGTAAAGTTTTCTTAAATTAAAAATTTCAAGGAAAAAATGGATAGTTATAGTATTCTTGGCTTCTTTGATAGATTTTTTGTAAGACGCAGCAATGATGTATTGTTAGGTATACTTCTTAGTTTGCATGGCCTTGCCCCTTGTTTCTCTTTTTTTCTTGATTGGGAAGGTACAAATTCCTAAGGTCAGTTTTTTGCCTAGGTCTTCCATGGGAAGATTAACACTATTGACCATATCCAGGAATGATCTTTTGTTTTTTTAGGGCTGTGATGATGCAAACTATGAAGGTCTCAGGAAAGTTAGTATGTTTCGTGGGGGTGTTAGCTTGTTTTCGATGATTTGGGATAACCTTTTGGAAACTTTTGGTGTTTGGATTATAGCAGATTGTGGTGGGATATGAATTGATGAATGAGGTCTTATTCCATCTTCCCTTTTTGAGATAAAGGGGCAACTCTAGCTTGCTGCTTTTTTTTTTTTTTTTTGAAAAGGAGACAAGCTTCAATATTTTTAATAAACTCAAAGTACAAGAGAGTTATACGTTGTTGAGAGTAATAGAGTTGTTGAGAGTAATAGAGAAGCCTAGAAATGGGGGGAGAGAGTGAGAGGATCAGTAGAAGCCCAGACTGCTCTTTCTGCTGTTTTTTCTAATATTTGACTATAGAAAATAGGTGGGTTTTAAGTAGCTAAGTGAGGGGAGAGGATGTCGTGGTAGGAGATTTGGGCTTGCCTAGGCTTAATCTACCATTTGCCCTTGGGCTTTTCTCACCAAGGTTTCTAGTGGTTATTCTTTCTTTCCATTTTTTTAAATTGCTGGTCTTGTGATGTAGTAGGAATATGGCATTATGGTCAAATCCATAACCTATTAGGATTATGATTAGTTTTTTCTATTAATTAGGATTAGGATTAGTTTCTTTTACTAATTAGGACTGTGATTAGTTTCTTTTATTAGTCATGATTAGGATTAATTTATTTTATTAATTAGGATTAGGATTAGTTTGCCTTTAAATTATAAATAGAATACTTGTCTTCTTGTATTCACAACTTTTAAACATTAATAAAATTTTCATATGTGGTATTCATCAAATTGGTATCAGAGTAGCAGTCTGGGCCATCATTGACTGCAATTTGTGGAAAATTGGAAAGCTCTTTGTGACATCAATCACAAGAGGAGGCTTTGTGAGTTGTACTCATTGTCGAACAACACACATCTAACAAGGGGGAACCCTTAACATTTCAAAAAAAAAAAAAACCCAAAGATCTATCAAGATTTTGCAAGAATGGAATTTTGTAGAAGAACTACTTCAATTTGGGACATAAATCGCTATAGAGAACAACCAAGAAAGATGGAGAAATATGCAAGAAAATTCAAGAACGGGTCCTACAATAATTATGATGAAGAAGTTTATTCAAGAACACCCAATTTGTACGTACTCATTGTCGAACAACACACATCTAGAAAAAGAAACCAAAGATCTATCAAGATTTTGCAAGAATGGACTTTCATAGAAGAACTACTACAATTTGGGACATAAATCATTATAGAGAACAACCAAGAAAGACTGAGAAATATGCAAGAAAATTCAAGAATCAATCCTACAACAATTTTGATGAAGAAGTTTATTCAAGAACACCCAATTTGTACATCAATTGTGAATTTTTTGAAGAAATGAAGAAGGATGTCAAGAAATTACAACGTTTGTTGGGAGAGATAATTCAAAACATAGAGCAATTTTCAGAACATTTGCAAGAACTTAAAAAAGATGTAATTCAAGATTAATTTCTTTTATTAATTAGGATTAGGATTAGTTTGCTTTTCAATTATAAATAAAGTACTCGTCTTCTTGTATTCACAACTTTTAAACATTAATAAAATTCACTCATTTGGTATACATCATCTTGTTTCCTGTAATGTGTAGTTTGATAGCTTGTGTTCTTTGTTTACATGGATCCTTTAGTTCTGGTCTTTTCTTTTTCAAATTCCCTTGCATTTTCTATTTTCTTCTGGTTTTGTAGAAGGGGGAAAAAGAGTTGTCTCAAGCTGGATTTTGGTTTTCCATTTAAACCCATCACGAGCATGGCCTGTTCTTTAATTAATTGACAGTATTCTGAACCATAATGGAATTATCAGAACCATGAAAGCACATATACTATGAAGTCTATTTGCATGTTGTTCCCGTTTATCTCTTCTGATGAAAGTCTGCCTTTTTCTTGTTTATTTTCAAATGTACATGCAGGTCCCATGCTTCCTATTGTGGATGGTTACTATCCGCAAAATGTCACTTGATCACTATCCTGGATTTGACTATGTAAGGCTGATTTATTAAATTTGGGGAAAATATGAATATAATTCTTACACAATACAACTAGGAGGCTGAAAAAGTTATCATTCTCATTTTGCCTCTTGAAAAGTGCAATCAAGGGCATGGATGGGTTGGGCTTTCTAGTTTGATGTATTTAGCTGGTCATCCTATAGGACCTATACTACTAGATGCTTCCTGGAATTCCTTTCGTTTCCGATCTTTGATATGATCAACAAGCTGCTGTAGTTGCACTGTTTTTAATTTTTTTTATTTCTAGTAACTAAAGTTGGAACTAGTCAAGGGTTAAGTTTGGGGTGTATTAATTGCAGGGTGGAGCTTTATGGTTCCAAAATCTGACAGAGTATCCACATGGAGTTTTTGGCCCCATATTTCCATTTTTAATTGCCAGCTTGCACTTCATTAATGTTCAGGTATTCCTACTTTTTCTTGTTTTCAAGCACAAACAGATTTCTTTGAATGGTATGTTAGGTGCTTCTGATCTAGCTTGAGTGAAAATTAGTCGATGCCATTGGTAAGTGTTCAAGAGGCTATACATCCTAAGATTCTTAGAATGGTTGCCGTATCGGGTATGTGAATAATTGAAAAGAAAAGAGGAAGGGGATTTGATGAGAAGATAGAAGAAACTTCCAATAGAGTTTTATGGTTGCCGTATCGGTATCGGGTATGTGAATAATTGAAAAGAAAAAAGAGGAAGGGGATTTGATGAGAAGATAGAAGAAACTTCCAATAGAGTTTTATGGTTGCCGTATCGGTATCGGGTATGTGAATAATTGAAAAGAAAAAAGAGGAAGGGGATTTGATGAGAAGATAGAAGAAACTTCCAATAGAGTTTTGTGATATTATGTGGTATTTAATTACAAACATGCATGAACTTTTATCACACATCAGCCGAATGCCAAGAGAAAACTCTTGTTTTTCTTCGTTCTTCACTTGCCTACTCATTGTTGATTGTCAAGAAAGCATCTATGTTGTTTAAACTTATTGTTGCTGTTAAATTTTGGCAATGAAAGGAGTAGCCCATCTATCTTATATGGAGTATGAGTCCCCTTGGTTTTTCTAATGTGGGACTCTTAATATCTCCAATATGCTCCCTCAAGATGGTGCCTCTTTGGTTTCACCTATCTTGGACCGAATACCCGTTTGGGTCTAATGCGCTATGATACCATATCTATCTTATATGGAGTATGAGTCTCCTTGGTTTTTCCAATGTGGGACTCTTAATATCTCCAATAGTTGCCATATTGTACATCTTTTTTTGGGCCAATATAATTTTCTGGTTTTTCAATCTCGCCAAAGAATGATCTACGTTTTCAATTTTCAATGTTAACAGTATGTATTCTTTGCTCATTTCTTTATTTATTTTTCCCAGTTGTCTTTCAGAAAATCATCATTGGAAAAAGAAACTGGCATAATTGGGATTTTAGCAAAAGTAAGTGTTTAAGATGTTCTTAATGTTGACAGAAATATACTCAATAACACATGCTTATAGTTTTGTTCCAATGCTTTAGATGTATTTCAGACTGATAAATACATTTTCTCTCTGCAGTACTACAAACTCTATTTGAATCTACTGACTGTACCACTATTTTTTATTGGTTACTGTATTCCACAGGTAATTCTGCTCATGATTACTTTTGAAGTGGCATTTTAAAATTTTATAAGATTTCACCGTTCTTGTAGACTTTAATGGAAGCAGTTTGACTTTATTATTATCATTATCATTTTCTTTTATTTTTACTTTTAAATTTTAAACAAGAGATATAACTTTTTCATTATAAAGAAGAAAAGAGATGCTTGCTTTTAGGATACATACTCTTAAAGGAGTAACAAGGAAAAAAGGGTAATATAAAGGTTTCACAAACCATGACAAATTATATGCTTAAAAACTTAACAAAGAAAGAACCAAATGTTATCTTGTTTGATTACCTTTGTACAGGAGCAATTAATTATTGTTTTCGTTTCCATTTAGTCTTTTCCTTTCCTTTTTTGTTTAAGTAATGAAGAACAATTCATTAAAGAGA AGTTTGCCCTCCCCGCCGAAAATGGCAACGTCGAAGCTCTGTACTCACCTTCGCCGTCTTCGTCCATCTCGTTTTTACTCCATCTCTTCCCTTTCTTCTCCTCTGCCCTTTCGACTTCACGAAGCTCACACACTCTCAAGCTCTCACCATCAACCATTCACCACTCCCTCCCATCGTTTTGATCCTCATATAAGCTCCCTTAGTGCTTTCACCGCATTCTCCTCTCGGTCCTTCTGGACTCGTTCAAACGACGATTCAGAGTTCGACCGGATTGCCCATTACGGTGTTGAATCAAGCCACCTCTCGAACGACGATACGGGAATTCAAGACTTGGAACTTGGAGGAGTTGTTGAAGAAGTCATTGGTGCGACTGCGGTGGAGAATTCGATTTTACCAATTCAGCAACTTACTTCGATTCTGGATGGGTTCCATCAGTATACCGGTATGCCCTGGTGGGCAGTTATTGCTTCATCAACTTTAGCTCTCAGATTTACGTTGCTTCCCATACTCATTGTTCAACTCAACAAGTTGAAAAGGATTGGAGAATTATTTCCAAAGTTGCCACCTCCACTGCCACCACCTCTTTCGGGACGGAGTTACATCGACCAAATTTCTCTTTTCCGAAAAGAAAGAAAGGCAATTGGATGCCCCTCATTTCTGTGGTTCGCTGCATACTTTTTCATTCAGGTCCCATGCTTCCTATTGTGGATGGTTACTATCCGCAAAATGTCACTTGATCACTATCCTGGATTTGACTATGGTGGAGCTTTATGGTTCCAAAATCTGACAGAGTATCCACATGGAGTTTTTGGCCCCATATTTCCATTTTTAATTGCCAGCTTGCACTTCATTAATGTTCAGTTGTCTTTCAGAAAATCATCATTGGAAAAAGAAACTGGCATAATTGGGATTTTAGCAAAATACTACAAACTCTATTTGAATCTACTGACTGTACCACTATTTTTTATTGGTTACTGTATTCCACAGGTAATTCTGCTCATGATTACTTTTGAAGTGGCATTTTAA SLPSPPKMATSKLCTHLRRLRPSRFYSISSLSSPLPFRLHEAHTLSSSHHQPFTTPSHRFDPHISSLSAFTAFSSRSFWTRSNDDSEFDRIAHYGVESSHLSNDDTGIQDLELGGVVEEVIGATAVENSILPIQQLTSILDGFHQYTGMPWWAVIASSTLALRFTLLPILIVQLNKLKRIGELFPKLPPPLPPPLSGRSYIDQISLFRKERKAIGCPSFLWFAAYFFIQVPCFLLWMVTIRKMSLDHYPGFDYGGALWFQNLTEYPHGVFGPIFPFLIASLHFINVQLSFRKSSLEKETGIIGILAKYYKLYLNLLTVPLFFIGYCIPQVILLMITFEVAF Homology
BLAST of Cucsat.G8629.T3 vs. ExPASy Swiss-Prot
Match: Q8L718 (ALBINO3-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALB3L2 PE=2 SV=2) HSP 1 Score: 263.1 bits (671), Expect = 4.4e-69 Identity = 119/203 (58.62%), Postives = 156/203 (76.85%), Query Frame = 0
BLAST of Cucsat.G8629.T3 vs. ExPASy Swiss-Prot
Match: Q0WUC5 (ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALB3L3 PE=1 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 4.3e-64 Identity = 147/319 (46.08%), Postives = 185/319 (57.99%), Query Frame = 0
BLAST of Cucsat.G8629.T3 vs. ExPASy Swiss-Prot
Match: Q42191 (Mitochondrial inner membrane protein OXA1 OS=Arabidopsis thaliana OX=3702 GN=OXA1 PE=2 SV=2) HSP 1 Score: 70.1 bits (170), Expect = 5.5e-11 Identity = 61/224 (27.23%), Postives = 108/224 (48.21%), Query Frame = 0
BLAST of Cucsat.G8629.T3 vs. ExPASy Swiss-Prot
Match: Q9SKD3 (Mitochondrial inner membrane protein OXA1-like OS=Arabidopsis thaliana OX=3702 GN=OXA1L PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 3.6e-10 Identity = 56/203 (27.59%), Postives = 94/203 (46.31%), Query Frame = 0
BLAST of Cucsat.G8629.T3 vs. ExPASy Swiss-Prot
Match: O13375 (Mitochondrial inner membrane protein OXA1 OS=Kazachstania servazzii OX=27293 GN=OXA1 PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 7.0e-06 Identity = 46/193 (23.83%), Postives = 83/193 (43.01%), Query Frame = 0
BLAST of Cucsat.G8629.T3 vs. NCBI nr
Match: XP_004138896.1 (ALBINO3-like protein 2, chloroplastic [Cucumis sativus] >KAE8651737.1 hypothetical protein Csa_006628 [Cucumis sativus]) HSP 1 Score: 647 bits (1669), Expect = 6.19e-230 Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0
BLAST of Cucsat.G8629.T3 vs. NCBI nr
Match: XP_008441758.1 (PREDICTED: ALBINO3-like protein 2, chloroplastic [Cucumis melo]) HSP 1 Score: 593 bits (1529), Expect = 1.22e-208 Identity = 301/327 (92.05%), Postives = 307/327 (93.88%), Query Frame = 0
BLAST of Cucsat.G8629.T3 vs. NCBI nr
Match: XP_038890165.1 (ALBINO3-like protein 2, chloroplastic [Benincasa hispida]) HSP 1 Score: 561 bits (1447), Expect = 3.82e-196 Identity = 280/326 (85.89%), Postives = 298/326 (91.41%), Query Frame = 0
BLAST of Cucsat.G8629.T3 vs. NCBI nr
Match: KAG6598966.1 (ALBINO3-like protein 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 541 bits (1393), Expect = 4.73e-191 Identity = 275/326 (84.36%), Postives = 293/326 (89.88%), Query Frame = 0
BLAST of Cucsat.G8629.T3 vs. NCBI nr
Match: XP_022933145.1 (ALBINO3-like protein 2, chloroplastic isoform X2 [Cucurbita moschata]) HSP 1 Score: 541 bits (1393), Expect = 1.18e-189 Identity = 275/326 (84.36%), Postives = 293/326 (89.88%), Query Frame = 0
BLAST of Cucsat.G8629.T3 vs. ExPASy TrEMBL
Match: A0A0A0LJT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G094350 PE=3 SV=1) HSP 1 Score: 647 bits (1669), Expect = 2.33e-232 Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0
BLAST of Cucsat.G8629.T3 vs. ExPASy TrEMBL
Match: A0A1S3B4X9 (ALBINO3-like protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485819 PE=3 SV=1) HSP 1 Score: 593 bits (1529), Expect = 5.89e-209 Identity = 301/327 (92.05%), Postives = 307/327 (93.88%), Query Frame = 0
BLAST of Cucsat.G8629.T3 vs. ExPASy TrEMBL
Match: A0A6J1F440 (ALBINO3-like protein 2, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439944 PE=3 SV=1) HSP 1 Score: 541 bits (1393), Expect = 5.71e-190 Identity = 275/326 (84.36%), Postives = 293/326 (89.88%), Query Frame = 0
BLAST of Cucsat.G8629.T3 vs. ExPASy TrEMBL
Match: A0A6J1EYX9 (ALBINO3-like protein 2, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439944 PE=3 SV=1) HSP 1 Score: 541 bits (1393), Expect = 2.63e-188 Identity = 275/326 (84.36%), Postives = 293/326 (89.88%), Query Frame = 0
BLAST of Cucsat.G8629.T3 vs. ExPASy TrEMBL
Match: A0A6J1I9X8 (ALBINO3-like protein 2, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472541 PE=3 SV=1) HSP 1 Score: 533 bits (1374), Expect = 4.41e-187 Identity = 271/326 (83.13%), Postives = 291/326 (89.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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