Cucsat.G8356.T16 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCCTATTTTTGATAATTCCCCAAGGAAATTCTCCGCCCCCAGCGGCGCCGACCACCGCTGAGTACTGCATTCATTGCGGCGGAGCGATCTCCATTCTAACTCCACGCTCAACTCTTCAATTTTAAAATTCAATCAACCAAAAAAGGAAATTGCCAACTTTTTTTTATTGTAATTTAAAAGGCTTCGATTTCACTCACTCCCTCGATGACTGTTCATGAAAAGGCGTGAAAAGAACTGAGATCGTGTCTATATCTTATAAGTCCACGATATTGCATTGCATCCTCCCATTTCTTTTTCATTCTTCAACAACTTTTTGTGTATTCTCATTGGTAATTTCTCTTCTTCAGGCGGATTTCTCCTTAGGCGGTTCTATTTGTATTTTTTGTGAGTATTGGTTTCCATTCTGATAGTTCATTTTTTAGCACCATTTGGAGAATACTTTCATGGGTTTTGGTTGTTTCGTTGGAATTTTTTTTTTCCAGTGATTTTGGGGTCAATCCACATTTTGTTATGACCATTTTCTTGTTTCATTTGCATGGGTTTGAGTTTGTTGAATCTAAATCAGTTGATAGATGAAATGCATTTTTTGTTTTTTTGTGGTTATTTTTGGGGGGATTTTGTTTAGTTTGAGATCTGTTTGATCAATGTTTTTGGGCATTGCAGATTGAAGTGTTCTTGAGTTTTGTGGGTACCTGGAAATGGAGAATGGTGATGAGTTCAATCAGATTTCTGATGCTAAATATGAATGTCTTCTCTTTGGTATTACATTTTGGACTTCTTATCTTTTTCAAGTTCAAAGTTGGATTCGAGAGTTTTTTATAACAAAGAATTATTTGTTTACTTTCAGATCTAGATGACACTCTTTATCCTTTTAACTCTGGTTTGGCAAAGGAAATCACCAAGAACATTCAAGGTTAGATGGAATTTCCTTTCCCCTTTCCCCTCTGGATTCAGAAACATTTGGGGCTGATAGTGTTTAGAGAAATGAGGCTCTTCGTATTTCTATGATATTGTCCATTTTGAACTTGAGTTTGCATGGATTTATCTTTTTGAAATGTTATCTTATGTGAATTGACATGGGATTATGTTCAAATCTCCAACTGATAACGAGTTAGAAGTTAGGTTTCTTTGTTGTTTTATTGATTGGATGAGTTTTTGTTACTTCTCTTGTAGAATATATGATTGAGAAGTTAGGAATGGAAGAGAACGTGCCTGAATTGTGCATTTCCTTGTACAAGATTTATGGGACAACAATGGCTGGTCTTAGAGTAAGTTAAAACATCATAGCCTTTTACATGATCTTTCTTCAAAACAACCATTGCAGTAAATTATTGGATACTATGTCCTGGTCGTTTTTCCTGGTTGCAGGCTATTGGGTATAACTTCGATTACGATGATTTCCATAGGTAACTAACTTTTTATCTACATTATTCTATGTTTGAGAATTTTGTGTTGTATTCACAATTCTTTTTCTTCCTGTTCTGCAGTTTTGTTCATGGAAGATTGCCATATGATATGCTCAAGCCTGACCCGTTATTGAGAAACCTACTTCACAGCTTACCAATTCGAAAATTTGTAAGTAGCTTGTTATGGAATTGACAAATGAAGAAAACAGAAAACATAAATCAATAGTGAATCAACACAGAGACATTTTAACCTCCCTTACCAGACTTTAGTTATACTATTTGGTGTCTATTTTAGTTTTAACTAGTGTTTTGATTTTTACCCTTTCTTTTTGTGTTTCTCTCTGATTTCTGACCTCAGATATTCACAAATGGTGATATGGCCCATGCAAACAGAGCGCTGAAGAGACTAGGATTAGAGGACTGCTTTGAAGGGATTTTATGCTTTGAGACTTTGAATCCTGATAAGGGAACGGTTGATGAGGAAGAAGGGTCTGTAATTTTTGACATCAATCAGTACATGAGCAATCCAAATTCTGATCTTGATCTACCGAAGACGCCGGTTGTCTGCAAACCATTCGAAGAGGCATATAAGCAAGTTTTCGAGATAGCCAATATCAACCCGAAAAAAACTGTAAGTTGAGAACAGATCAGAGTAACTTTATGTGACCTTTTCCAAGAGTTCGATGATTATAATTCTGTTGTGTTGAAAACAAAACATCCAATATTTAAAACTAGAATCAATAAACTTATTATTCATTTAATATATAAGATCTTAACAACTTACTGGGCCTGCCAAAAGCCATTCTTCTTAAGTGCCTAATACATTAACAAGAATAAATTTTAGCCTTTTAACTTGCAAAGCCTGCTATCTGACCATCAAGAACATTGATCGTTTAATACTTAGCCTGATCTGTTATCTAACTCCATTTTCATTTCACAATACTACATTCTTCTTATTTTCTTGTTTCCAGTTGTTCTTTGATGATAGTGTTCGAAATCTACAAACGGGGAAGTTGGTGGGCCTTCACACAGTGCTTGTAAGTGGCAATACCATTGGGATTTCTTTAAAGTATGCTGCTGAATTCACTTACATTCTAACCTAATCATGAATTCAGGTTGGAAATTCGCAACGAATCAAGGGGGTGGATCACGCTTTTGAGAGCATCCATAATATCAAGGAAGGATTGCCTGAGCTATGGGAAGACATGGAGAAGCTCAAGAGCGTCACATACTCCAGAAAGGAGGTAGCTATCGAGACTTCAGTTAGAGCATAATTATTAATTAGTATTTATGATCTTACTTACAAGTGGACAGTGCAAAAACTGTTGGCAATTGCTGCAATGAATGCAAAATATGAGAACTTGTTAATAGAACAATAATTATTGGCTCATGATAAGAGTGAAAATTTGTCTCCTTTTAGATTTCTGTTGATCATAAACTCTCTCTTTCTTTCTTTCTTTTCTTTCTTTATTTTCTTTTTAAGAGTTCAACATGAGGTAGAATGAAGGATTTTTCATTTTTGAAGGTT ATGGAGAATGGTGATGAGTTCAATCAGATTTCTGATGCTAAATATGAATGTCTTCTCTTTGATCTAGATGACACTCTTTATCCTTTTAACTCTGGTTTGGCAAAGGAAATCACCAAGAACATTCAAGAATATATGATTGAGAAGTTAGGAATGGAAGAGAACGTGCCTGAATTGTGCATTTCCTTGTACAAGATTTATGGGACAACAATGGCTGGTCTTAGAGCTATTGGGTATAACTTCGATTACGATGATTTCCATAGTTTTGTTCATGGAAGATTGCCATATGATATGCTCAAGCCTGACCCGTTATTGAGAAACCTACTTCACAGCTTACCAATTCGAAAATTTATATTCACAAATGGTGATATGGCCCATGCAAACAGAGCGCTGAAGAGACTAGGATTAGAGGACTGCTTTGAAGGGATTTTATGCTTTGAGACTTTGAATCCTGATAAGGGAACGGTTGATGAGGAAGAAGGGTCTGTAATTTTTGACATCAATCAGTACATGAGCAATCCAAATTCTGATCTTGATCTACCGAAGACGCCGGTTGTCTGCAAACCATTCGAAGAGGCATATAAGCAAGTTTTCGAGATAGCCAATATCAACCCGAAAAAAACTTTGTTCTTTGATGATAGTGTTCGAAATCTACAAACGGGGAAGTTGGTGGGCCTTCACACAGTGCTTGTTGGAAATTCGCAACGAATCAAGGGGGTGGATCACGCTTTTGAGAGCATCCATAATATCAAGGAAGGATTGCCTGAGCTATGGGAAGACATGGAGAAGCTCAAGAGCGTCACATACTCCAGAAAGGAGGTAGCTATCGAGACTTCAGTTAGAGCATAA MENGDEFNQISDAKYECLLFDLDDTLYPFNSGLAKEITKNIQEYMIEKLGMEENVPELCISLYKIYGTTMAGLRAIGYNFDYDDFHSFVHGRLPYDMLKPDPLLRNLLHSLPIRKFIFTNGDMAHANRALKRLGLEDCFEGILCFETLNPDKGTVDEEEGSVIFDINQYMSNPNSDLDLPKTPVVCKPFEEAYKQVFEIANINPKKTLFFDDSVRNLQTGKLVGLHTVLVGNSQRIKGVDHAFESIHNIKEGLPELWEDMEKLKSVTYSRKEVAIETSVRA Homology
BLAST of Cucsat.G8356.T16 vs. ExPASy Swiss-Prot
Match: Q09893 (Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC24B11.05 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 4.7e-16 Identity = 74/251 (29.48%), Postives = 111/251 (44.22%), Query Frame = 0
BLAST of Cucsat.G8356.T16 vs. ExPASy Swiss-Prot
Match: P40025 (Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PHM8 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 5.0e-10 Identity = 45/140 (32.14%), Postives = 74/140 (52.86%), Query Frame = 0
BLAST of Cucsat.G8356.T16 vs. ExPASy Swiss-Prot
Match: P53078 (Suppressor of disruption of TFIIS OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SDT1 PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 6.6e-10 Identity = 57/218 (26.15%), Postives = 100/218 (45.87%), Query Frame = 0
BLAST of Cucsat.G8356.T16 vs. NCBI nr
Match: XP_011658227.1 (uncharacterized protein C24B11.05 [Cucumis sativus] >XP_011658231.1 uncharacterized protein C24B11.05 [Cucumis sativus] >KGN65738.1 hypothetical protein Csa_019919 [Cucumis sativus]) HSP 1 Score: 576 bits (1484), Expect = 1.99e-207 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
BLAST of Cucsat.G8356.T16 vs. NCBI nr
Match: XP_016902092.1 (PREDICTED: uncharacterized protein C24B11.05-like isoform X1 [Cucumis melo] >XP_016902093.1 PREDICTED: uncharacterized protein C24B11.05-like isoform X1 [Cucumis melo] >XP_016902094.1 PREDICTED: uncharacterized protein C24B11.05-like isoform X1 [Cucumis melo]) HSP 1 Score: 557 bits (1436), Expect = 4.14e-200 Identity = 274/282 (97.16%), Postives = 279/282 (98.94%), Query Frame = 0
BLAST of Cucsat.G8356.T16 vs. NCBI nr
Match: TYJ97389.1 (Haloacid dehalogenase-like hydrolase superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 553 bits (1426), Expect = 1.68e-195 Identity = 272/280 (97.14%), Postives = 277/280 (98.93%), Query Frame = 0
BLAST of Cucsat.G8356.T16 vs. NCBI nr
Match: XP_038893602.1 (uncharacterized protein LOC120082486 [Benincasa hispida] >XP_038893603.1 uncharacterized protein LOC120082486 [Benincasa hispida] >XP_038893604.1 uncharacterized protein LOC120082486 [Benincasa hispida]) HSP 1 Score: 543 bits (1400), Expect = 1.23e-194 Identity = 265/281 (94.31%), Postives = 273/281 (97.15%), Query Frame = 0
BLAST of Cucsat.G8356.T16 vs. NCBI nr
Match: KAA0067755.1 (Haloacid dehalogenase-like hydrolase superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 553 bits (1426), Expect = 2.79e-194 Identity = 272/280 (97.14%), Postives = 277/280 (98.93%), Query Frame = 0
BLAST of Cucsat.G8356.T16 vs. ExPASy TrEMBL
Match: A0A0A0LVD2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523620 PE=4 SV=1) HSP 1 Score: 576 bits (1484), Expect = 9.63e-208 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
BLAST of Cucsat.G8356.T16 vs. ExPASy TrEMBL
Match: A0A1S4E1J3 (uncharacterized protein C24B11.05-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497146 PE=4 SV=1) HSP 1 Score: 557 bits (1436), Expect = 2.00e-200 Identity = 274/282 (97.16%), Postives = 279/282 (98.94%), Query Frame = 0
BLAST of Cucsat.G8356.T16 vs. ExPASy TrEMBL
Match: A0A5D3BED8 (Haloacid dehalogenase-like hydrolase superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002080 PE=4 SV=1) HSP 1 Score: 553 bits (1426), Expect = 8.13e-196 Identity = 272/280 (97.14%), Postives = 277/280 (98.93%), Query Frame = 0
BLAST of Cucsat.G8356.T16 vs. ExPASy TrEMBL
Match: A0A5A7VPY6 (Haloacid dehalogenase-like hydrolase superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00750 PE=4 SV=1) HSP 1 Score: 553 bits (1426), Expect = 1.35e-194 Identity = 272/280 (97.14%), Postives = 277/280 (98.93%), Query Frame = 0
BLAST of Cucsat.G8356.T16 vs. ExPASy TrEMBL
Match: A0A1S4E293 (uncharacterized protein C24B11.05-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497146 PE=4 SV=1) HSP 1 Score: 516 bits (1328), Expect = 3.12e-184 Identity = 254/262 (96.95%), Postives = 259/262 (98.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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