Cucsat.G8305.T4 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTAAATATGGACATTTTTAATTTTGGTGTTATGTAAATATTTTTCCTAAAATTAAGGGAATGTGTAAATACTTTTTTTTTTCTTTAGAAAAATATACAAAAAGAAGCATATAGGTTCCAAGGAGAAAATTGGAAGAGATTGGTGTAAAAATATTGTTGTTCGTTCTTTTTCTTCTAGTTAGAGAGTCCACTCACCAAAGTGCAGCTTCCATGGCAGCATCAGCATCAGCATCGAACTCTGAAGCAGAAATGAAAAAGGAAGAACTACCAAAATCCATGGAAGAACCACCAGAACAAGAACATCCCCACCATAACCAATCAGATGAAGGCGAAGACGACAACGAATCCCATCTCCATCTCTCTGCCTGCTCTTCACCTCCTCATTCCCTCTCCACCAACAAAGATCCCTCGCCGCCTCTCCACTCTCCCTCCATCTCCTCCGATTTCTCCGATCACACTTGTCACTCTCCTGGAAACTCCTCCATCGACCACGCCCTCTCCATTACACCCCTTCAGGACTTACACTTACCTCCCTCTGCTAATTCTCCATCTCCAAGACCTGTAGCAGCCAACCGCGCGCAGCCGTCTGAGCCGATTGTTGTGACCAAGGTGGATACTGAAATACAGGGAATACGGAAAGTGGAAGAGGTTATTGATAGTGATGGCGATGTTGAGAGTGGCGATGGAGATGATGGAGATGGTGGTAAGGTTGGGCGAGGACGGAAATTGATGGAGACTTTGTCGATTAAGAAAATTAAGAGGGAGGAATTGAGGAAGAAGATCTTGTTAGGGTTTAGAATTTGTGGATTTGCCTTCTGTTTGGTATCGGTTTCGGTTATGGCTTCTGATAAGGATCAGGGCTGGGCTTTGGATTCATTCTATCGCTATAAGGAATTCAGGTAATTAGTTTGTTCAATGAAATCGTTTCTTACTAATGAAATATCAAATTTTATGGAGTTATTCAATTTGGAAATTTCATTAAATTTGTAGGTACTGTATGGCAGTCAATGTTATTGGATTTGTTTACTCTGCACTTCAATCCTATGATCTTGTCTATTTTCTCTCTACTGGAAAACACGTGATCCGTAATCACTTCAAGCAATACTTTGATTTCTTCATTGATCAGGCAAGTTTCTGTTTTGGCTTGAAATTGGGTTTCTGAATTTCAATCTGTTCATTATTAATTCTGCTATAATCTCATTACCTAACCCAAAAATGGATGGCTAAGATTAAGCCAATAGTTTAGTCCTTAATTTAGATGACATTATTGTGTATCGATTATGATAGCTTATAGGACCCACTGAAGATAGAAAAGTTATGCATAATTCCCAACAGTCATTAGATAGATGGTTCTCTTTCTGTATTCCTTTACTGAAAATTTTTCCATTCATCATGAAGCTTTTTCTTACCTTTTTCATACAGAAGAATCTGCAAGTTCTTCAATATTTAACATCTTCCTGCCGTCTTTAACACCCAATATTTAACATCTTACTGACGTCTTTAACACCCAATATTTAACATCTTACTGACGTCTTTAACACCCAAATGTCATAGTGTTAGATGGGTTATCCGAGAAAGAAAAATAGATATAATCTGCAAGCGCTCTCCATGAAGAGCTTACTAATACTTTTACCATAAAGTCACTCAATTTTTATATTAATAACAGAGTAGTGGTTGGAAAAACTTGGATTGATTTGGTTTGGTTGAGTAACTTTCCTTATATTCTTTCCATTTTATTTGCCTTAGCTTTTGGGCATCCTTTTTATTACCTTTTCTCTGCTACTGCCGCCTTTCCCTCGCATTTTCTTATTTTTCCTTTTTATTCTTAAAGTTCGTAAGGAAACTAGCTTTAATTTGCAGCAAAGAATCTAGTATGGACATTAATAATCACTTGGCTGTAAAAAATTAAAGAAAAATTAACTTCCGGCCAAACCTTGTATTCTAAACCGATAAAAGAGAGCATATCTCAAGTGAGATATGTAGGGGTGTGCATCAATTTTCAGATCTAACTGCCACCAAACTGACTATTATCGATTTAGCAAATGTTCAAATTGACCTTGATCATTGGGGAGTGCAAATCAGTTGTCGGTCGGTATTATCCTTTAGTTTTCTTTTTAAAAAATGTCGTTGTGGACTTCCCCAAACCGATGCTAATCGAGCCCCTCCTTATCTCCGATCAACCACCTTTGTTTTTCGAATTTGGTCTATCATGCTAACTCGTAGACATATGTCTTAGCCACCAAGAGGTTTTGAGTTCGATTCATCTACCCTTGTTATGCACTTGAAAAAAAAAGAAAATTTCCTATGAAGTTGTAAAATCGTTGCAATTAATTCTTATTACACTTGTGCTATAAGTGCTTGAGTTTTAATAGTCATCTGACTTAAAAAGTTCAATGGTGTTAGTGCAAAACAGTCCTTGTAATTTAAGAATGATTTAAGGTTTGGAATTGAAGTGTAACGACCTTAAACCTTGTGGTTAGAGGCAGGGCTGCACATTTTTCAAGTTGCAACTATATGGAGTTAGGATGACTAAGTTGAATGATTGTTTAAAGTGAAAAAGCTAAGATACAATTGTAATAACTCTTGTAGTCAAAGGTAGTTTTTGCATTTTTTTTCATAGACTAACCATTAACTTTATGGATAGAACTGAGTCATGATTCAAACATTCAATTTCACATGAAGTTACTAATAAACATTTCGTTAGTGTTCGAGGTTCACTACACTTGGTGCGATAATCATAAAGAAATTGATGACAGCGTTGTTCTGCTACAGATAATAGCATATCTTCTTCTATCAGCTTCGTCTTCGGCTGCCACCCGAATCGATGATTGGCAATCCAATTGGGGAAAGGACAAGTTTCCAGATATGGCTACCGGGTCGTTGGGATTTTCCATTGTTGCATTTGTAGCTTTTGCCTTGAGTTGTATAATCTCTGGTTATACTCTATGTAAATCTGCTTAGGTAACCTTTGCTGGACTTGCTTATGGGCGAACTTTATTCAATGATGATGATACCAACAAACAAACAAACACAATGGTGATGAGGATATACAAGAAGATTAGTTTCAACATTGTGCTGTGAATCAGGTATGCTTTCACTTGAAAAATATATTTGTGAGTTTACTTAATTCTTTGTAAATAAGATGAAGAACACTTGTTGTGCACTTTGAATCATTACAAGGTGAAAAGGAAAGAGTGAATAGGGAAAAGTTAGAGAAAGTTATTCAATGTTTTCATAAATTGCTAAAATGGAGAAAGCCATGACTCAATTACATGATAAAACAAGTATCCAAAACAAGGGTAAGTTAATAATAATAAAGACGTTTTTGGTTGACAATCCAAATTTTAGTTTAGGTTCTAAAATCTACGGAGTTCAAGATTCTATTATCTA ATGGCAGCATCAGCATCAGCATCGAACTCTGAAGCAGAAATGAAAAAGGAAGAACTACCAAAATCCATGGAAGAACCACCAGAACAAGAACATCCCCACCATAACCAATCAGATGAAGGCGAAGACGACAACGAATCCCATCTCCATCTCTCTGCCTGCTCTTCACCTCCTCATTCCCTCTCCACCAACAAAGATCCCTCGCCGCCTCTCCACTCTCCCTCCATCTCCTCCGATTTCTCCGATCACACTTGTCACTCTCCTGGAAACTCCTCCATCGACCACGCCCTCTCCATTACACCCCTTCAGGACTTACACTTACCTCCCTCTGCTAATTCTCCATCTCCAAGACCTGTAGCAGCCAACCGCGCGCAGCCGTCTGAGCCGATTGTTGTGACCAAGGTGGATACTGAAATACAGGGAATACGGAAAGTGGAAGAGGTTATTGATAGTGATGGCGATGTTGAGAGTGGCGATGGAGATGATGGAGATGGTGGTAAGGTTGGGCGAGGACGGAAATTGATGGAGACTTTGTCGATTAAGAAAATTAAGAGGGAGGAATTGAGGAAGAAGATCTTGTTAGGGTTTAGAATTTGTGGATTTGCCTTCTGTTTGGTATCGGTTTCGGTTATGGCTTCTGATAAGGATCAGGGCTGGGCTTTGGATTCATTCTATCGCTATAAGGAATTCAGGTACTGTATGGCAGTCAATGTTATTGGATTTGTTTACTCTGCACTTCAATCCTATGATCTTGTCTATTTTCTCTCTACTGGAAAACACGTGATCCGTAATCACTTCAAGCAATACTTTGATTTCTTCATTGATCAGGCAAGTTTCTGTTTTGGCTTGAAATTGGGTTTCTGA MAASASASNSEAEMKKEELPKSMEEPPEQEHPHHNQSDEGEDDNESHLHLSACSSPPHSLSTNKDPSPPLHSPSISSDFSDHTCHSPGNSSIDHALSITPLQDLHLPPSANSPSPRPVAANRAQPSEPIVVTKVDTEIQGIRKVEEVIDSDGDVESGDGDDGDGGKVGRGRKLMETLSIKKIKREELRKKILLGFRICGFAFCLVSVSVMASDKDQGWALDSFYRYKEFRYCMAVNVIGFVYSALQSYDLVYFLSTGKHVIRNHFKQYFDFFIDQASFCFGLKLGF Homology
BLAST of Cucsat.G8305.T4 vs. ExPASy Swiss-Prot
Match: Q9FNE8 (CASP-like protein 4A1 OS=Arabidopsis thaliana OX=3702 GN=At5g40300 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.0e-22 Identity = 52/96 (54.17%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of Cucsat.G8305.T4 vs. ExPASy Swiss-Prot
Match: D7LIR2 (CASP-like protein 4A3 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_482607 PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.0e-21 Identity = 79/227 (34.80%), Postives = 120/227 (52.86%), Query Frame = 0
BLAST of Cucsat.G8305.T4 vs. ExPASy Swiss-Prot
Match: Q84WP5 (CASP-like protein 4A3 OS=Arabidopsis thaliana OX=3702 GN=At2g36330 PE=2 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.5e-20 Identity = 81/226 (35.84%), Postives = 117/226 (51.77%), Query Frame = 0
BLAST of Cucsat.G8305.T4 vs. ExPASy Swiss-Prot
Match: D7MMW4 (CASP-like protein 4A2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_919556 PE=3 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.1e-15 Identity = 76/238 (31.93%), Postives = 110/238 (46.22%), Query Frame = 0
BLAST of Cucsat.G8305.T4 vs. ExPASy Swiss-Prot
Match: Q501G6 (CASP-like protein 4A2 OS=Arabidopsis thaliana OX=3702 GN=At5g62820 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.0e-13 Identity = 75/236 (31.78%), Postives = 111/236 (47.03%), Query Frame = 0
BLAST of Cucsat.G8305.T4 vs. NCBI nr
Match: XP_004142358.1 (CASP-like protein 4A3 [Cucumis sativus] >KGN52378.1 hypothetical protein Csa_008911 [Cucumis sativus]) HSP 1 Score: 530 bits (1366), Expect = 1.85e-188 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
BLAST of Cucsat.G8305.T4 vs. NCBI nr
Match: XP_008458753.1 (PREDICTED: CASP-like protein 4A1 [Cucumis melo] >KAA0037507.1 CASP-like protein 4A1 [Cucumis melo var. makuwa] >TYK01982.1 CASP-like protein 4A1 [Cucumis melo var. makuwa]) HSP 1 Score: 446 bits (1146), Expect = 3.64e-155 Identity = 242/273 (88.64%), Postives = 250/273 (91.58%), Query Frame = 0
BLAST of Cucsat.G8305.T4 vs. NCBI nr
Match: XP_038890250.1 (CASP-like protein 4A1 [Benincasa hispida]) HSP 1 Score: 411 bits (1056), Expect = 2.46e-141 Identity = 225/276 (81.52%), Postives = 243/276 (88.04%), Query Frame = 0
BLAST of Cucsat.G8305.T4 vs. NCBI nr
Match: KAG7016184.1 (CASP-like protein 4A1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 377 bits (967), Expect = 2.15e-128 Identity = 214/279 (76.70%), Postives = 235/279 (84.23%), Query Frame = 0
BLAST of Cucsat.G8305.T4 vs. NCBI nr
Match: KAG6578643.1 (CASP-like protein 4A1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 371 bits (953), Expect = 8.43e-126 Identity = 211/272 (77.57%), Postives = 230/272 (84.56%), Query Frame = 0
BLAST of Cucsat.G8305.T4 vs. ExPASy TrEMBL
Match: A0A0A0KS01 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G630810 PE=3 SV=1) HSP 1 Score: 530 bits (1366), Expect = 8.94e-189 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
BLAST of Cucsat.G8305.T4 vs. ExPASy TrEMBL
Match: A0A5A7T7H8 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00890 PE=3 SV=1) HSP 1 Score: 446 bits (1146), Expect = 1.76e-155 Identity = 242/273 (88.64%), Postives = 250/273 (91.58%), Query Frame = 0
BLAST of Cucsat.G8305.T4 vs. ExPASy TrEMBL
Match: A0A1S3C844 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498066 PE=3 SV=1) HSP 1 Score: 446 bits (1146), Expect = 1.76e-155 Identity = 242/273 (88.64%), Postives = 250/273 (91.58%), Query Frame = 0
BLAST of Cucsat.G8305.T4 vs. ExPASy TrEMBL
Match: A0A6J1FJD7 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444795 PE=3 SV=1) HSP 1 Score: 366 bits (940), Expect = 4.12e-124 Identity = 208/270 (77.04%), Postives = 225/270 (83.33%), Query Frame = 0
BLAST of Cucsat.G8305.T4 vs. ExPASy TrEMBL
Match: A0A6J1JTE4 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489567 PE=3 SV=1) HSP 1 Score: 362 bits (930), Expect = 1.46e-122 Identity = 209/275 (76.00%), Postives = 228/275 (82.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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