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Cucsat.G7827.T17 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCTTCATTTCTCCACTTTTCCCTACTCGGGTCGTCTCTCTCTCTCTCTCTCTCCCCCCCCTTTTGCAGCAAAACAAACATCAAACCGTTAAGAAAATGAAGACCCGTGGCACTAGAAAGATTTCTATTATATGGCTTCCTTTCTTTTGTTTCTCTTTCTTCTTTTTCGGTATGCTCATCACGAACAGGTTTCTACTCCTCTTCCACCATTTTCTCTTTTCTATTTGATGTAATTCTCTATTTTTTCCTCATGGCCTTTTGATTGGTGATTTCTTGGGTTTTTGGATTTTGGATTTTTTGGGTTATGTAGCAGAATATGGTCGGCGTCTGAATCCAATGGTCAGGTCATCTCCCGTCGTCGACATGAACAAGAACTTCAAATCGTCTCTGAAGATAGCTCAATTAAGATTGTGAGTGTGTATGCATCTGATTTCCCAACATTTTTACGACTGATTCTATTTTGCTTGTTTAGTCTGATTTCTCTTTTTTCTTGGAAATTTTTAAGCCAGCGGAGAAAACGGATATGATGACCGAAGTTTATAGAACTCACGAAGCAATCCAGTTTAGTTCAACTTATATTTCTTTCTAATTTTTCGCTTCCTAATTCTTCCAGTTTTGGCTTAACAAACTGTTTTCCTCATTTGGGATACAGATCTTTAGACAAGAAAAATTACAATGCTTAACATGGATTTAGTGGAGGCTAGGAATTCTAGGGAGATGCACTCCTCTGATAGCCACACCCCCTCCATTGAATCCAGTGGTAAAAGTAATCTTCCGAAGAAGAAAATGTTAATGGTGATTGGGATAAACACCGCCTTTAGTAGCAGAAGGCGTCGAGATTCAGTTAGAGAGACGTGGATGCCACGAGGTATTTAGCTCCTACCCACTGTTCTTATGTTTCGTATTGATCATTTGACGTTATTTTTCCTGCTAAAACATGGTTTATGTTGTTTTGGTCAGGGGAAAAGCTGTTCCAGTTGGAGCGAGAGAAGGGGATTGTTGTCCGGTTTATGATTGGCCATAGGTAGAATTGCGTTTCTTGTGGGGTATTTGGTTCTAGCTACTTTTTTGAAATTAGATTCTGTTGAAAATAGGCAAACTAACTTATTTTCCTTTATGGTTTATTCTTTTTTTTTCCATCCAAACGGTATTAACGAATGTAATAGGGCATTTAAATGATAGGCTATTAGGGCTTTTGTTGGCTAAATTTCTCTCTGTGAGTTCCTCTTATAATCATGCGCTGGATTGTCTTAAGATATGACAATAACAGACGTGGGTTTGTGATGACTTTTTGAGGTGAAGCCTTTTTTCTATAAATACTTGTGAGAGAAGCACAAATTAAGTGTTTTTAAAGGCATCTTAATGTATTGAGTATTTTCAAACTTACTCTTTGACTATTTAACCAAAAATATGAAATATTGAAGTATGCTTTAAAATTCTTCTTCTTTTAGAAAAGGGTAGAGAGAGGCTGTAGAAACTAAATTGCATGGTCATTTTCATAGCATATGAGATGGGAATGTTAACTTATATACAACAATAGAAACTTTTCTTCTCCACGTAAAGGAAAGTTGTGGAATCTAAAAAGTGATGTATGGTCTGTTCACATTTTAAGATGGTCCAATGTAAGACTCGATTGGTAAAGCTGCAAGTTATATTATGTTGTTTAAATTCTTGAAAATAAGTTATACGAGTTTAAGGTTCTCTGTTTTACAATCATAATGATACAGAGATTTTCTAGATTGTTTTCTATGTAAATAGGAAGTAAATTTAGACCGGACTTTCTGACTGATTATCATACGTTTTGTATTCTTCTCATATACAGAAAGTAGTTTTGTTATGTAGTTGTTATAGCAGTTTTCTCCCTGAAATGCATAATCCCACGTTAATCTTCCATCATCCTTTTATGTTTGTGCAGTTTAATCTCGATGCATTATATGACTGGTTTGATATCGCTTCTTTGTTTATGATGGAACTAATCTCATTGATTTTTGCTTGATTAGCGCAACTTCCAACAGCATTTTAGATCGTGCAATTGATTCAGAAGATGCGCTGCATAAAGATTTCCTTAGGCTGGTAAGAGAATTTACATGGAGTAATTCTCATATAAAAGAATGATTAGACATTCAGCTTGTAAACTGGATTATCATGTGCAGGAACATATTGAAGGGTATCATGAATTATCTGCAAAAACAAAATCCTTCTTTTCCACTGCCGTTACTAAATGGGATGCTGACTTCTATGTCAAGATAGATGACGATGTCCATGTAAATTTAGGTGTGTTTCACGTGGACCATTGTTATTCTTTCTAATTATATGATAACCAAATATACATTTATTAAGATTGAGCTTTTTTTAAAATTCTTTCTCATATAGGGATGCTAGCTACTACTCTTGCTCACCACCGTTCGAAGCCCAGAGTGTATATTGGGTGCATGAAATCTGGACCTGTTCTTTCTTCAAAGTAATTATCATGGACTATCTATCATGTTAATCGAAGATGGCGAGATCAATCATCTCTATTATTTTGTTTCATCTTGGAACAATGATATCATTCTTTTGTTTGTTTCTGTTTGTGTATTTTTAAAAGGGATTTGTCAATAATATTTTTTTTTTCATTTTCTTTCATATCCCAGGAGTGTCAAATACCATGAGCCTGAATACTGGAAATTTGGAGAGGAGGGAAATAAGTATTTCAGACATGCAACTGGACAGATTTACGCAATCTCAAAGGATCTAGCCACATACGTTGCAGTCAATCAGTAAGGATATAATTTTTCCATGTGCATCTAGAGTACATAAAGTAAAATACATCATCTTAATCACAGCTCTTTAATTAAAACCATTAATGCATCAACATGAGATGTCAAGTTTTTTAGTACATTCAACTTTTTTCGCATAAAGTTTTTGAAATGTGTCTAATGTTTACTGAGCTAAAAGAATATGCGATTGACTTCAATGGATATCGGAAGCTTTTCTCACTTGATCTTGCAGCTCTTTGACATTTTATGTTATGTTATATTTTACAGTTAGGGATTTACCTTATCAAAAAAACTTACAGATTATGGATGGTAGATTTTTAATTGTTTGTTACTAATGAAATGGCAAATGAGCATTAGCCTTGTGTTAAAATGAGACGTTTATGAAATTGAGCAACTTATATATATCTTCCATCTCTTTGTTGGGAAGAAATCTGTATGTGGGCCAGTGGTTCTTTTATCTATAGACACTTGTACCCGCCTTTTGTTCGTGTAATTTTCAATTCAAAGAGTTGAAACTTGTGATGCAGGCCAATTTTGCACAAATATGCCAATGAAGATGTGTCTCTTGGTGCTTGGTTAATAGGCCTTGAAGTTGAGCATATTGATGACCGCAATATGTGCTGTGGGACGCCGCCAGGTAATGTTTTCATTAGATATGAATGATGTTATATTTACACAGCATACATAAAGTAAAGAACAAAAGTTTTCCCAAACCTTAGTTATCCAAATTCTTTATCCCTTATTGCAAAGCATCTTTTTTATTTTGTTAAGTAGTTTTATCTTAAGACAATAAAAATTTGCAGATTGTGAGTGGAAGGCACAAGCAGGAAATGTATGTGTTGCATCATTTGACTGGAGTTGCAGTGGAATATGTAAATCTGTGGAGAGGATCAAGAGTGTCCACGAGAAGTGTGGTGAAGGGAATGGGGCCGTCTGGAGTGCCTTAATCTAGTGTTAAAGCTTCTCTTGATCTTTACCTGTGGTCAGACAAAGCTGGAGATTGTTTGGGAGTTGAACTGGAGATTAAACATTATCAAAACAATGCAAGTAGAACCTTGAAAGAAGCTATATAAAAGCGTGTGGGGATTAAATGGATTTGTAAGATTGTGTGGAAAATCTTCATATTTTCAGAAAAGAAAAAAGAAAAAAGAAAAAAGTAGTTTCTTCTTCAAAGCTTCCAATTTTGTTCGTGTGAGTTAAATTCATTGGGTACCTCTGTTAGTTTTCCCCTTTGATTATAGAATTTATGTATTACAGCCAGTGTATTATGTATTTTAGGCATCATTTGTATTTCCCCTACAAGGTTGAGTTACCAGTCATTGTTTCAGATTCTGTTTATGTAAACATTTCTTTGTATAGTCAAAATAAATAAAGTGAAATTGTTTGTGT TTCATTTCTCCACTTTTCCCTACTCGGGTCGTCTCTCTCTCTCTCTCTCTCCCCCCCCTTTTGCAGCAAAACAAACATCAAACCGTTAAGAAAATGAAGACCCGTGGCACTAGAAAGATTTCTATTATATGGCTTCCTTTCTTTTGTTTCTCTTTCTTCTTTTTCGGTATGCTCATCACGAACAGAATATGGTCGGCGTCTGAATCCAATGGTCAGGTCATCTCCCGTCGTCGACATGAACAAGAACTTCAAATCGTCTCTGAAGATAGCTCAATTAAGATTCCAGCGGAGAAAACGGATATGATGACCGAAGTTTATAGAACTCACGAAGCAATCCAATCTTTAGACAAGAAAAATTACAATGCTTAA FISPLFPTRVVSLSLSLPPLLQQNKHQTVKKMKTRGTRKISIIWLPFFCFSFFFFGMLITNRIWSASESNGQVISRRRHEQELQIVSEDSSIKIPAEKTDMMTEVYRTHEAIQSLDKKNYNA Homology
BLAST of Cucsat.G7827.T17 vs. ExPASy Swiss-Prot
Match: Q6NQB7 (Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana OX=3702 GN=B3GALT7 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 9.8e-11 Identity = 41/85 (48.24%), Postives = 55/85 (64.71%), Query Frame = 0
BLAST of Cucsat.G7827.T17 vs. ExPASy Swiss-Prot
Match: Q9LM60 (Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=B3GALT5 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10 Identity = 35/89 (39.33%), Postives = 61/89 (68.54%), Query Frame = 0
BLAST of Cucsat.G7827.T17 vs. ExPASy Swiss-Prot
Match: Q8LEJ9 (Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=B3GALT4 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.4e-04 Identity = 31/83 (37.35%), Postives = 49/83 (59.04%), Query Frame = 0
BLAST of Cucsat.G7827.T17 vs. NCBI nr
Match: XP_011653825.1 (beta-1,3-galactosyltransferase 7 isoform X2 [Cucumis sativus]) HSP 1 Score: 171 bits (433), Expect = 4.25e-49 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of Cucsat.G7827.T17 vs. NCBI nr
Match: XP_011653824.1 (beta-1,3-galactosyltransferase 7 isoform X1 [Cucumis sativus] >KGN54610.1 hypothetical protein Csa_012575 [Cucumis sativus]) HSP 1 Score: 166 bits (421), Expect = 2.66e-47 Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0
BLAST of Cucsat.G7827.T17 vs. NCBI nr
Match: XP_038899162.1 (beta-1,3-galactosyltransferase 7-like isoform X2 [Benincasa hispida]) HSP 1 Score: 159 bits (401), Expect = 2.44e-44 Identity = 78/87 (89.66%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of Cucsat.G7827.T17 vs. NCBI nr
Match: XP_008444117.1 (PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Cucumis melo]) HSP 1 Score: 158 bits (400), Expect = 3.43e-44 Identity = 80/87 (91.95%), Postives = 83/87 (95.40%), Query Frame = 0
BLAST of Cucsat.G7827.T17 vs. NCBI nr
Match: XP_038899161.1 (beta-1,3-galactosyltransferase 7-like isoform X1 [Benincasa hispida]) HSP 1 Score: 154 bits (389), Expect = 1.50e-42 Identity = 78/88 (88.64%), Postives = 84/88 (95.45%), Query Frame = 0
BLAST of Cucsat.G7827.T17 vs. ExPASy TrEMBL
Match: A0A0A0KY94 (Hexosyltransferase OS=Cucumis sativus OX=3659 GN=Csa_4G377730 PE=3 SV=1) HSP 1 Score: 166 bits (421), Expect = 1.29e-47 Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0
BLAST of Cucsat.G7827.T17 vs. ExPASy TrEMBL
Match: A0A1S3B953 (Hexosyltransferase OS=Cucumis melo OX=3656 GN=LOC103487555 PE=3 SV=1) HSP 1 Score: 158 bits (400), Expect = 1.66e-44 Identity = 80/87 (91.95%), Postives = 83/87 (95.40%), Query Frame = 0
BLAST of Cucsat.G7827.T17 vs. ExPASy TrEMBL
Match: A0A1S3BAE8 (Hexosyltransferase OS=Cucumis melo OX=3656 GN=LOC103487555 PE=3 SV=1) HSP 1 Score: 154 bits (388), Expect = 1.02e-42 Identity = 80/88 (90.91%), Postives = 83/88 (94.32%), Query Frame = 0
BLAST of Cucsat.G7827.T17 vs. ExPASy TrEMBL
Match: A0A6J1C7P4 (Hexosyltransferase OS=Momordica charantia OX=3673 GN=LOC111009001 PE=3 SV=1) HSP 1 Score: 146 bits (369), Expect = 6.44e-40 Identity = 71/87 (81.61%), Postives = 79/87 (90.80%), Query Frame = 0
BLAST of Cucsat.G7827.T17 vs. ExPASy TrEMBL
Match: A0A6J1FTV3 (Hexosyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111446785 PE=3 SV=1) HSP 1 Score: 145 bits (366), Expect = 5.67e-39 Identity = 74/99 (74.75%), Postives = 81/99 (81.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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