Cucsat.G6862.T3 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GATAGAGAAATGGGAGGGTGGGGTTGAAAGGAAAAGTAAAAGACGTGGTGTTTCTCAAAATATACACAGATCCCTATGGAGTGCAGGGATGCTACCCAACATTTGCTCATTTTGCCCTTCCTTCCCTTCAAATTCCATTCTCTTTGTTTAACTTTAAAACACAACTCTCCTCTCCTCTTTTCCTTCTTCCTTCTCTATTCTTTACTCCAAGTCCTCCAACTACTTCTTATTTCTCCAACACACACCCCCCCCCCCCCCCCCCCCCTTTTGTTTTTTGTTTACTTTTATGCTTCTTCTTCTCCTTCTTTTCATTCTCATTTTTCCTCTCTACTATTGAAACAAGAAGAACTTCAAATTTAATTAAAAGGGTAGCAGAAAAAAAAAAGTATAAGTATACAGTTAGCTATTGTTGTTTGTTTTGTCTCCCAATGATTAATTTGGGTTCTTGCAGCTAGGAAAAGAAAAAAAAGGAAGAAGAAGAGAAAATGAAGTCCATGAATGATAATGAGGATAGTAACAACAATAATAACAATAACAATAATAGTTGGTTAGGATTCTCTCTTTCTCCCCACATGAAAATGGAGGTTTCTTCTTCTGATCATCCATATAATCAACACCATTCTCTTCACTCTGCTTCAAATCCTTTCTACTTATCTCCTCATTTCAACAACAATAACACTGAAATCTTTTATGGGATTCCTGATAATTCCTCTCTTCATCATCACTCTGCTGCTGCTTCCCTCTCGGTAATGCCTCTCAAATCCGATGGTTCACTCTGTATTATGGAAGCCCTTTCAAGATCTCAAACTGAAGGTTCTTTTTTTGGGTTTTTATATATATACGCGTGTGTATTTTGTTTGTCATTTTTTGTTTGTGGATTTTCTCAAGTTTTTGTTTTTGATAGGGATGGTGCCGAGTTCTTCACCGAAACTTGAGGATTTTCTTGGTGGTGCAACAATGGGAGGTCGAGGAGGCTATTTTAATCAAAATGCTGAATCTGAATCCGACAGGGAACATTCTTTCGACCTTCTTCAAAGACCCATTAGACAAAATCAACAAATTTTAATTCAAAATTCCAATCAATATTATTCTGGGTTACTTCCTTCTTCCATTGGAATTGGAACTTGTGATCCCCAAATTCTTCCTCCTGATGACGACGGAATCCCTTGCTTTAGAAACTGGGTCTCTCGCTCTCACTACTCCGCCACTCATAATACTCTCGAGCACCACATTACCGGCGGCGATGGCGGCGGCGGCGGCACTCTTATGAATGAAAGTAATGGTGGTGGTTCTGCTTCCATTGGCGGAATGAGCTGTGGAGAATTACAGTCGTTGAGTTTGTCGATGAGTCCAGGTTCTCAATCGAGCTCGTTCACGACTTCCGGCCAGATCTCCCCTACTGGAGGCGACGGCACCGCCGTGGAAACTAAAAAAAGAGGCCCCGGAAAACTCTGCCAGAAACAACCCGTTCATCGTAAATCCATCGATACTTTTGGCCAAAGAACCTCTCAATATCGTGGCGTCACCAGGTTTCTTCATTACTATTTTTCCTTTTTAACCATTTATAAACTAATTTCAAATTATTTTAATCGTCTGTTTAAACAAATATTGTAGGCATAGATGGACGGGGAGATATGAAGCTCATCTGTGGGATAACAGTTGCAAGAAAGAAGGACAAACCAGAAAAGGAAGACAAGGTTTGTTATAATAAAAATCTAAAAACCCATTTCGAAATTTTAAATTTTTTTTTCAAATGCTTCCATTTTCGTTTGGCTCTCTTACTGGTTCTTTTTTTTTTCTTCTTATGGTCCATTCTTGATGGGAATGCCATTTCAATTCCAACTATATCGTTACAGTGTATCTTGGTAAGTTTTATTTTCCATAAAGCTTAGTTTATTTAAAATGTTATTTATATTAAAGCTCACATAAAAACTTGAACTTAATTATTTAAATTTGAAGGAGGATATGATATGGAAGAAAAAGCTGCGAGAGCTTACGATCTTGCCGCCCTCAAGTATTGGGGACCCTCTACTCATATAAACTTTCCGGTAAGGTTCAAGTCTCTCAAAATAAGAAAAACTACACACATGGCCCTGTCATAACTTTTCATCATAGTGATTAAAAGAATAAAATTTTAATATGATTAATTAATTCTGTTTTTTGTTTGGCAGTTGGAAAATTATCAGACTGAACTAGAAGAAATGAAGAATATGAGCCGCCAAGAATATGTTGCCCACTTGAGAAGGTAAAATTTCAAGTTTGGTTTTTTATTCATCAGCATCATCATCATCATCTCATGATCCCCTTTTACTTTTTTTTCTCTTTTCTTTTCCTTATCTGTTTCTGATTTTGTTCGTAATCGTATATTCCTTTGGGTTTTCTTTTTTGCAGGAAAAGCAGTGGCTTTTCAAGGGGCGCTTCAGTTTTCCGTGGTGTCACAAGGTTCTTTTCTCTTAATCATAAAGCTTAATCTTTCATTAATTTTTTAGTTAATGTAATTAATTGTTTCTTAAACAGACATCACCAACATGGACGATGGCAGGCTAGAATTGGGAGAGTTGCTGGAAACAAAGATCTTTATCTTGGGACATTTAGTGAGTTTTCTTTCTTTCTTTCTTTTTTTGAGACATAAATTGCTTTACGAGTGATTAAATGTTTGTATAGGAATTAATGTGTTGTCGGAACAGAAAGTCTCTAAATTCCTAAATCTTTGTATGTATGTGTGTGAATGAATGCAAGATTTTGAAATTTAAAGTAGTGGTGTCATTAAATGTAATATTATTGTCAGGCACGCAAGAGGAAGCGGCTGAGGCTTATGACATAGCAGCAATCAAATTCCGCGGTGTAAATGCAGTCACCAACTTTGACATTTCCAGATATGATGTCGAAAAAATCATGGCTAGTAATACTCTACTGGCAGGCGAGCTGGCTAGAAGGAACAAGGATGTCGAACCAAGCAACGATTCCTCAATCGTTCCCTACGACTCCTCCATTGTGTCAAACAACAATGGTGGGATTGGGATTGGGATGGAAATAAATCCCGACGCCAACACCGCAAATGGGAACGCTAATGATTGGAAAATGGCATTGTATCAAAATCCATCACACCACCAGCAACAGGCAGCTGCCGCTACTTGTGTTGCTGACTCTTTGGATAATCATCAAAACAAGTCGATGGCTGTGTCGGGCGGTTATCGAAACACGTCGTTTTCGATGGCATTGCAGGATTTGATTGGGATCGAATCGTTAAGCGCTAATACTCATGGGATTGAAGATGATGTGAGCAAACAGGTGACACATTTTTCAAATTCATCATCGTTGGTGACGAGTTTAAGTAGCTCGAGAGAAGGTAGTCCTGACAAAACGAATGTGTCAATGCCGTTTGGAAAGGCCCCACCCTTAATGGCGTCAAAGCTAATCGGTGCAACAAACGGTGTTGGAGTCGGGTCTTGGTATCCATCCCCACAGCAGCTGAGGCCAACAGCAGCAGCAGCCATTTCCATGGCACATTTGCCTGTTTTTGCAACATGGAATGACACTTAAGAAAAACAAAACCCCTTTTTCTTTCCCGTTGATTGCTTTTGCATTTTAGTTTCTTTTAAATTTTGGTTTTTGCATGAAGGTGAAATGAAAAGAAAGAAAGGCAGGGAAAACTTATGATGATGTCTAGGGGGCAAGAAAAAAAAGAAAAGAAAAGAAAAGAACCAAAGGGATGGGTTTTGAGAAGATAGAATTTTGATTACAATCCCCCTTTTTATTTTTCTAAGTTTGTCAGTGGGAGAAAGTGGGGTAAAGAATAGGAATCAGTGGGGTCCAATTTCTGTGACTGTAATCCATCTTTTTTTCAAACCAAACCTCTTGGCTCCTCCTCTTATTTTGCCAATGAAAGCAAAGGGAAAGATTTTTGTGGTAATGAAAGAAAAAAAAGAAAAGAAAAGAAAAGATGGGGAAGCAATGATTAAATTCTCAATGATTTGATGTTAGTGAAATTTATAGTGGATGATTAAAATAAAAACAAAAAACAATAAATAATTGCCCAATCTCTCATCACTATA ATGAAGTCCATGAATGATAATGAGGATAGTAACAACAATAATAACAATAACAATAATAGTTGGTTAGGATTCTCTCTTTCTCCCCACATGAAAATGGAGGTTTCTTCTTCTGATCATCCATATAATCAACACCATTCTCTTCACTCTGCTTCAAATCCTTTCTACTTATCTCCTCATTTCAACAACAATAACACTGAAATCTTTTATGGGATTCCTGATAATTCCTCTCTTCATCATCACTCTGCTGCTGCTTCCCTCTCGGTAATGCCTCTCAAATCCGATGGTTCACTCTGTATTATGGAAGCCCTTTCAAGATCTCAAACTGAAGGGATGGTGCCGAGTTCTTCACCGAAACTTGAGGATTTTCTTGGTGGTGCAACAATGGGAGGTCGAGGAGGCTATTTTAATCAAAATGCTGAATCTGAATCCGACAGGGAACATTCTTTCGACCTTCTTCAAAGACCCATTAGACAAAATCAACAAATTTTAATTCAAAATTCCAATCAATATTATTCTGGGTTACTTCCTTCTTCCATTGGAATTGGAACTTGTGATCCCCAAATTCTTCCTCCTGATGACGACGGAATCCCTTGCTTTAGAAACTGGGTCTCTCGCTCTCACTACTCCGCCACTCATAATACTCTCGAGCACCACATTACCGGCGGCGATGGCGGCGGCGGCGGCACTCTTATGAATGAAAGTAATGGTGGTGGTTCTGCTTCCATTGGCGGAATGAGCTGTGGAGAATTACAGTCGTTGAGTTTGTCGATGAGTCCAGGTTCTCAATCGAGCTCGTTCACGACTTCCGGCCAGATCTCCCCTACTGGAGGCGACGGCACCGCCGTGGAAACTAAAAAAAGAGGCCCCGGAAAACTCTGCCAGAAACAACCCGTTCATCGTAAATCCATCGATACTTTTGGCCAAAGAACCTCTCAATATCGTGGCGTCACCAGGCATAGATGGACGGGGAGATATGAAGCTCATCTGTGGGATAACAGTTGCAAGAAAGAAGGACAAACCAGAAAAGGAAGACAAGGTTTGTTATAA MKSMNDNEDSNNNNNNNNNSWLGFSLSPHMKMEVSSSDHPYNQHHSLHSASNPFYLSPHFNNNNTEIFYGIPDNSSLHHHSAAASLSVMPLKSDGSLCIMEALSRSQTEGMVPSSSPKLEDFLGGATMGGRGGYFNQNAESESDREHSFDLLQRPIRQNQQILIQNSNQYYSGLLPSSIGIGTCDPQILPPDDDGIPCFRNWVSRSHYSATHNTLEHHITGGDGGGGGTLMNESNGGGSASIGGMSCGELQSLSLSMSPGSQSSSFTTSGQISPTGGDGTAVETKKRGPGKLCQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGLL Homology
BLAST of Cucsat.G6862.T3 vs. ExPASy Swiss-Prot
Match: Q84Z02 (AP2-like ethylene-responsive transcription factor CRL5 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL5 PE=2 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 5.2e-33 Identity = 137/371 (36.93%), Postives = 163/371 (43.94%), Query Frame = 0
BLAST of Cucsat.G6862.T3 vs. ExPASy Swiss-Prot
Match: Q38914 (AP2-like ethylene-responsive transcription factor ANT OS=Arabidopsis thaliana OX=3702 GN=ANT PE=1 SV=2) HSP 1 Score: 140.2 bits (352), Expect = 4.4e-32 Identity = 145/378 (38.36%), Postives = 181/378 (47.88%), Query Frame = 0
BLAST of Cucsat.G6862.T3 vs. ExPASy Swiss-Prot
Match: Q5YGP7 (AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana OX=3702 GN=PLT2 PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 7.3e-19 Identity = 54/102 (52.94%), Postives = 71/102 (69.61%), Query Frame = 0
BLAST of Cucsat.G6862.T3 vs. ExPASy Swiss-Prot
Match: Q1PFE1 (AP2-like ethylene-responsive transcription factor AIL1 OS=Arabidopsis thaliana OX=3702 GN=AIL1 PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 6.2e-18 Identity = 63/150 (42.00%), Postives = 82/150 (54.67%), Query Frame = 0
BLAST of Cucsat.G6862.T3 vs. ExPASy Swiss-Prot
Match: Q5YGP8 (AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana OX=3702 GN=PLT1 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 2.4e-17 Identity = 52/100 (52.00%), Postives = 64/100 (64.00%), Query Frame = 0
BLAST of Cucsat.G6862.T3 vs. NCBI nr
Match: XP_004142906.1 (AP2-like ethylene-responsive transcription factor ANT [Cucumis sativus] >KGN62423.1 hypothetical protein Csa_018637 [Cucumis sativus]) HSP 1 Score: 687 bits (1772), Expect = 1.32e-243 Identity = 345/348 (99.14%), Postives = 346/348 (99.43%), Query Frame = 0
BLAST of Cucsat.G6862.T3 vs. NCBI nr
Match: XP_008444521.2 (PREDICTED: LOW QUALITY PROTEIN: AP2-like ethylene-responsive transcription factor ANT [Cucumis melo]) HSP 1 Score: 662 bits (1709), Expect = 4.41e-234 Identity = 336/348 (96.55%), Postives = 338/348 (97.13%), Query Frame = 0
BLAST of Cucsat.G6862.T3 vs. NCBI nr
Match: XP_038884082.1 (AP2-like ethylene-responsive transcription factor CRL5 [Benincasa hispida]) HSP 1 Score: 617 bits (1591), Expect = 3.11e-216 Identity = 319/349 (91.40%), Postives = 329/349 (94.27%), Query Frame = 0
BLAST of Cucsat.G6862.T3 vs. NCBI nr
Match: KAA0060971.1 (AP2-like ethylene-responsive transcription factor ANT [Cucumis melo var. makuwa]) HSP 1 Score: 612 bits (1579), Expect = 1.41e-215 Identity = 309/317 (97.48%), Postives = 311/317 (98.11%), Query Frame = 0
BLAST of Cucsat.G6862.T3 vs. NCBI nr
Match: XP_022997002.1 (AP2-like ethylene-responsive transcription factor ANT isoform X2 [Cucurbita maxima]) HSP 1 Score: 557 bits (1435), Expect = 9.33e-193 Identity = 298/356 (83.71%), Postives = 316/356 (88.76%), Query Frame = 0
BLAST of Cucsat.G6862.T3 vs. ExPASy TrEMBL
Match: A0A0A0LKW8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354000 PE=4 SV=1) HSP 1 Score: 687 bits (1772), Expect = 6.41e-244 Identity = 345/348 (99.14%), Postives = 346/348 (99.43%), Query Frame = 0
BLAST of Cucsat.G6862.T3 vs. ExPASy TrEMBL
Match: A0A1S3BAK2 (LOW QUALITY PROTEIN: AP2-like ethylene-responsive transcription factor ANT OS=Cucumis melo OX=3656 GN=LOC103487813 PE=4 SV=1) HSP 1 Score: 662 bits (1709), Expect = 2.13e-234 Identity = 336/348 (96.55%), Postives = 338/348 (97.13%), Query Frame = 0
BLAST of Cucsat.G6862.T3 vs. ExPASy TrEMBL
Match: A0A5A7V5A9 (AP2-like ethylene-responsive transcription factor ANT OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001060 PE=4 SV=1) HSP 1 Score: 612 bits (1579), Expect = 6.85e-216 Identity = 309/317 (97.48%), Postives = 311/317 (98.11%), Query Frame = 0
BLAST of Cucsat.G6862.T3 vs. ExPASy TrEMBL
Match: A0A6J1K3L8 (AP2-like ethylene-responsive transcription factor ANT isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492061 PE=4 SV=1) HSP 1 Score: 557 bits (1435), Expect = 4.52e-193 Identity = 298/356 (83.71%), Postives = 316/356 (88.76%), Query Frame = 0
BLAST of Cucsat.G6862.T3 vs. ExPASy TrEMBL
Match: A0A6J1HH40 (AP2-like ethylene-responsive transcription factor ANT OS=Cucurbita moschata OX=3662 GN=LOC111462882 PE=4 SV=1) HSP 1 Score: 555 bits (1431), Expect = 1.77e-192 Identity = 296/353 (83.85%), Postives = 316/353 (89.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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