Cucsat.G6761.T11 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G6761.T11
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionAlternative NAD(P)H-ubiquinone oxidoreductase C1
Locationctg1502: 1711422 .. 1715055 (-)
RNA-Seq ExpressionCucsat.G6761.T11
SyntenyCucsat.G6761.T11
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCTGCCACTGCACAGGTATGAAATGCAATCATGATCTGATGCATTAAACTTGGATGCTTATTTTTTTTATTGAGAATATTACATGCAGATATAATATAGTTGAGGGGACAATAATATATGTTTGTCTCACGTTTTATTTGAGCAATTGATAAACTAATAAGATATGTGCTAAATTTACTTTTAACGTCCAATTCCAATGCAGGATAATATAAATTTGTTTATGTGTTCACACAATATTGCAAGAGAACATTTATGAGATAACATTAGAGAAAAATTAGAGTATGAGTAGATGATTAGTAGGAGTGTGTTTTATTGTTAGTAGATAGATTCAGCATTCTAGTCTGATTGTTGATCACCTTGAACCGACTCCTAGCTTGTTGATCAGCTTGGATCAACCTTGCATTTGTTGATCAACTTAGATGAACTTCTCATTGTAGATCTACTTGGATCGGCCTTTGGCTTGTTGACCAACTAAGATTGACTTTTGTCTTATTGATCTACTTGGATCAACTTTTGCCTTGTTGATGATCGACTTGAATTGGCCTGGCTGGTTGATCTGCTTGGACCAGTCTCTAGCTTGTTTGATCTGCTTGGATCAGCTTCTGGCTTGTTGATTTTTCTTGGATTAGCTTCTAGCTTGTTGATCTGCTGATTTTCTGTGTTTGAATGTGTGCTGCTTCTGTGTTTGAATGTGTGCTTGATTGGAGAAAGCAAAGCACGTGATGTTCTTGAAGTTGAAGTTTTGAAGAAAAGAAAGTTTGTATCTAAAGAAAACTTGCATCTTCAAGTGTGATCAACTTTAGGATTAGAGTCTTCTGACTGTGGAAAATTCTTTCTATACCTCTCAAGTATAAAATTTATGATCCCCTTGAAATTAAGTTTGGGACACATGTCAAATTTTAATTAGTCCAAATTCATTTATTTGTATTTTTATCATTAGTTTGGTAAATGACACGGCAATTTGTGATTAGTTTAAAATTTCTCATTCAACAGTTACATAATAATAAATTTAGATCTTGTTTTTATTAAAAAGTATCCTAACAGAATTCTCTTGTTTTTCGACTAACCTCACCATTTTGACCTTAAGAAATGTTTCTTCCTACTATTTACAAGCTTGGCAGCCATAATTTAGAAGTTGGTTTGCTTTGTTGTTTGATCCTCTCACTTTTGGTCTTATAGTACTTCCTTCCTTTCCTGGATTGTCTTAAGTTGGCTGGCTTTAAAGGTTAGGTGACGTTTCGGATAAAGAGTGAGTTATTATAGTTTAGTTAAAAAGTTTGTATTTGAATTGTATATTATTTTAGTTTGGGTTATATTAGTATATGTTTGTTGGGTAGATTATTTTAGGTTAAGAAAGAAATAATAAATACTGTAGTAAAATGATGAATGTCAAATAGTAAAACTGTAGCAAATAGTAGTAGATGGGGTGTCTTGAAATAGTTTTTACTGTAGCTAATTGAGAATTTTTAAATAGAATTTACTATAACTAGTGGTGATTATTATAGTCTTGCATAATCCTCGTCCCAAACGGTTCGAATGTGTTCTCTAGTTTTGAGTTTCTTGTCTGTAATTGATTTGTTAGGTTTTAAGTATTTGCTTTTTGTTGTTTTCTCTTAATTGTTTCTCACAGTAAGTTCTATTTCCTTTTAAAGAAAAAAAAGTGTTCGTGGAGAGAAGCTAGTTTGAACCAATAAAACAACACATGTTTATCCAATATCCAAACAGCTTCCATAGCCTTTCTTCAATTTTCCCTACTTTACGTTTGTCTTTTATTTTATGTTTTCATTTTTTTTAATACATTTTCTTCAAAGTTAAAGATATTCTTCTTGTTCTCCAAGCAGGTTGCTTTCCAGCAAGCAGACTTCGTTGGTTGGAATCTCTGGGCTGCTATCAACAACCGTTCTCTTTTGCCCTTTAGGTTCGAAATTTCGATCTCTTGGCACCAAATTAGCTTTTCTCAACTTTCATGAACATATTTTCTTTTCCAATACACGCCTTTGACAGTATTTATAGGGACTAAGTACTTGTTTGGAATTACTTTTCAAGCATTTGTAAAATGACTTGAAAGTCGTTCCAAATCAGTCTTAAAAGTGTTCTTTTAAAATTTATTTGGTTAAACTTTTAACAGCAGTAAATTAAGTGCTTTTATTTTCTAAAATCACAATTTAAAGGTTTTGCAAATCTAAAGTAGTTTGAAAAATTTTAAACAGGGTCAAAAAAACAGTTGGGGGCATTTGGCCCACTAAATGGAGTTAATATGTTGTAGTTAGTAAGTTTGTGTTTGAGGTAGAATTGTAAAGTCGAATTCCTTGAGAATTGTAAAAAGTAAATTAGGAAAGTAAAGTGAAATTTTTGGTAAATGTAAAAAGTAGACATAGATGGGAAGATTGAGTTCTTGCGTAAATGTGAAAAATATAAAAAAATAAGAAGATAAAGTTAAGTCGATAAATGTGCAAGTTGAGTAGTATTTACTTTGCTGTAATTTGTTTATTTGTTTTTGTAGATATCAGAATTTAGGAGAGATGATGACTTTGGGAAGAAATGACGCATCAGTTTCTCCAAGTTTCATTGAAGGTTTATCCTTGGAAGGTCCGATCGGTCATGCAGGTATATATCATCTCTTTAAAGATCTAAGTTTGATAATTGATTAATGAGTCAATAAGCCTTTACTTATAGGATTCAAGCAGGTTCATTATGATTAGTGGAATAATACTACACTTGAAACAACCCCTAAAACTAATATTCTAACAACTTGTATACACAATTCCATAGACCTTTTAGATCATAATGTTACATTAAAAACTACTTTGAAGAAATCTTTAGCCCAAACTTTTTATTATAAATCCTCAGAAATATCGTATTTAAATGACTTGTCACTTTGATATTCAGTTGTATACTCTGGAGAGTTTTCTATACTTGAAGTGATGTGTTTTCTTAGTGTCCTAAAGTGCTTTAAGGTAGTCTTACCTTATTTTAAGGCTAGAATACACTTTTAAGGTAACAGTGACTTTGAAATTTTTAGGCTCATTTCACAATCATTTTGATTTTGTTTCTGAAAATTAAACAACCATCTCCAACTTTCTTCGTTTGTTATCTACTCTCTACCAAGTCGAATTTTGACAATAAAAATAATAGCTTTAAAAAATTTGTTTTTGTTTATGGAATTTGATTAAGAATTCAACGATTGTGTTTAAAAAATGGAATACGATAGTTATCCCTAATTTGTGGTATATGATAAGCAATAGTTAAGGAATAATAGTGCAGATTTAGAACAACCTCCAAATATAGACTAATATCATACTTAACAACTTATAAAGTTAATATGATGAATTTTTATTTTTTTGGCAGCAAGAAAAATAGCATACTTGATAAGACTACCAACGGATGAGCATAGGGTTAAAGTGGGGATCAGTTGGCTTACAAAGTCTGCTGTTGATTCCATTGCAACAATTCAAACCACCTTTACTAATGTATTCACTTCTCAATGAACCATTCTCTATATATTATGACTATTGATATGTATCTACATTTATTAGATGGTTGGTTTACTATGGACATTAAAATTTCAACATTTGATGATGATCTATACTCAAAGTTTTTTGTGGTATTTTAATTAAAGTCGGTTTACTTTTC

Coding sequence (CDS)

CCTGCCACTGCACAGCAGGTTGCTTTCCAGCAAGCAGACTTCGTTGGTTGGAATCTCTGGGCTGCTATCAACAACCGTTCTCTTTTGCCCTTTAGATATCAGAATTTAGGAGAGATGATGACTTTGGGAAGAAATGACGCATCAGTTTCTCCAAGTTTCATTGAAGGTTTATCCTTGGAAGGTCCGATCGGTCATGCAGCAAGAAAAATAGCATACTTGATAAGACTACCAACGGATGAGCATAGGGTTAAAGTGGGGATCAGTTGGCTTACAAAGTCTGCTGTTGATTCCATTGCAACAATTCAAACCACCTTTACTAATGTATTCACTTCTCAATGA

Protein sequence

PATAQQVAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGLSLEGPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFTSQ
Homology
[Close]
BLAST of Cucsat.G6761.T11 vs. ExPASy Swiss-Prot
Match: Q8GXR9 (Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NDC1 PE=1 SV=2)

HSP 1 Score: 181.0 bits (458), Expect = 7.3e-45
Identity = 85/108 (78.70%), Postives = 95/108 (87.96%), Query Frame = 0 

Query: 3   TAQQVAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGLSLEGP 62
           T  QVAFQ+ADF GWN+WAAINNR LLPFR+QNLGEMMTLGR DA++SPSFIEGL+LEGP
Sbjct: 410 TTAQVAFQEADFTGWNIWAAINNRPLLPFRFQNLGEMMTLGRYDAAISPSFIEGLTLEGP 469

Query: 63  IGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFT 111
           IGHAARK+AYLIRLPTDEHR KVGISW  KSAVDSIA +Q+  T V +
Sbjct: 470 IGHAARKLAYLIRLPTDEHRFKVGISWFAKSAVDSIALLQSNLTKVLS 517

[Close]
BLAST of Cucsat.G6761.T11 vs. ExPASy Swiss-Prot
Match: P73735 (Demethylphylloquinone reductase NdbB OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=ndbB PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.0e-18
Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 0 

Query: 1   PATAQQVAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGLSLE 60
           P TAQ  AFQQ D+  WN+WA +  R LLP RYQ LGEM+ LG + A +S     G+ L 
Sbjct: 306 PTTAQG-AFQQTDYCAWNIWANLTGRPLLPCRYQPLGEMLALGTDGAVLSGL---GIKLS 365

Query: 61  GPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVD 97
           GP    AR++ YL R PT +H++ VG++WLT+   D
Sbjct: 366 GPAALLARRLVYLYRFPTWQHQLTVGLNWLTRPLGD 397

[Close]
BLAST of Cucsat.G6761.T11 vs. NCBI nr
Match: XP_004146414.1 (alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X2 [Cucumis sativus] >KGN54781.1 hypothetical protein Csa_012297 [Cucumis sativus])

HSP 1 Score: 216 bits (551), Expect = 1.96e-65
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   PATAQQVAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGLSLE 60
           PATAQ VAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGL+LE
Sbjct: 432 PATAQ-VAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGLTLE 491

Query: 61  GPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFTSQ 112
           GPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFTSQ
Sbjct: 492 GPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFTSQ 542

[Close]
BLAST of Cucsat.G6761.T11 vs. NCBI nr
Match: KAA0041320.1 (alternative NAD(P)H-ubiquinone oxidoreductase C1 [Cucumis melo var. makuwa])

HSP 1 Score: 216 bits (550), Expect = 2.18e-65
Identity = 107/112 (95.54%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 1   PATAQQVAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGLSLE 60
           PATAQQVAFQQADF GWNLWAAINNR LLPFRYQNLGEMMTLGRNDASVSPSFIEGL+LE
Sbjct: 420 PATAQQVAFQQADFAGWNLWAAINNRPLLPFRYQNLGEMMTLGRNDASVSPSFIEGLTLE 479

Query: 61  GPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFTSQ 112
           GPIGHAARK+AYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTT TNVFTSQ
Sbjct: 480 GPIGHAARKMAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTLTNVFTSQ 531

[Close]
BLAST of Cucsat.G6761.T11 vs. NCBI nr
Match: XP_011653891.1 (alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 216 bits (551), Expect = 3.23e-65
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   PATAQQVAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGLSLE 60
           PATAQ VAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGL+LE
Sbjct: 456 PATAQ-VAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGLTLE 515

Query: 61  GPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFTSQ 112
           GPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFTSQ
Sbjct: 516 GPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFTSQ 566

[Close]
BLAST of Cucsat.G6761.T11 vs. NCBI nr
Match: XP_008442153.1 (PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 209 bits (533), Expect = 6.83e-63
Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 0 

Query: 1   PATAQQVAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGLSLE 60
           PATAQ VAFQQADF GWNLWAAINNR LLPFRYQNLGEMMTLGRNDASVSPSFIEGL+LE
Sbjct: 418 PATAQ-VAFQQADFAGWNLWAAINNRPLLPFRYQNLGEMMTLGRNDASVSPSFIEGLTLE 477

Query: 61  GPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFTSQ 112
           GPIGHAARK+AYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTT TNVFTSQ
Sbjct: 478 GPIGHAARKMAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTLTNVFTSQ 528

[Close]
BLAST of Cucsat.G6761.T11 vs. NCBI nr
Match: TYK02783.1 (alternative NAD(P)H-ubiquinone oxidoreductase C1 [Cucumis melo var. makuwa])

HSP 1 Score: 209 bits (533), Expect = 7.12e-63
Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 0 

Query: 1   PATAQQVAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGLSLE 60
           PATAQ VAFQQADF GWNLWAAINNR LLPFRYQNLGEMMTLGRNDASVSPSFIEGL+LE
Sbjct: 420 PATAQ-VAFQQADFAGWNLWAAINNRPLLPFRYQNLGEMMTLGRNDASVSPSFIEGLTLE 479

Query: 61  GPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFTSQ 112
           GPIGHAARK+AYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTT TNVFTSQ
Sbjct: 480 GPIGHAARKMAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTLTNVFTSQ 530

[Close]
BLAST of Cucsat.G6761.T11 vs. ExPASy TrEMBL
Match: A0A0A0L3R8 (Pyr_redox_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G495230 PE=4 SV=1)

HSP 1 Score: 216 bits (551), Expect = 9.50e-66
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   PATAQQVAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGLSLE 60
           PATAQ VAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGL+LE
Sbjct: 432 PATAQ-VAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGLTLE 491

Query: 61  GPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFTSQ 112
           GPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFTSQ
Sbjct: 492 GPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFTSQ 542

[Close]
BLAST of Cucsat.G6761.T11 vs. ExPASy TrEMBL
Match: A0A5A7TDE5 (Alternative NAD(P)H-ubiquinone oxidoreductase C1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G003210 PE=4 SV=1)

HSP 1 Score: 216 bits (550), Expect = 1.06e-65
Identity = 107/112 (95.54%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 1   PATAQQVAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGLSLE 60
           PATAQQVAFQQADF GWNLWAAINNR LLPFRYQNLGEMMTLGRNDASVSPSFIEGL+LE
Sbjct: 420 PATAQQVAFQQADFAGWNLWAAINNRPLLPFRYQNLGEMMTLGRNDASVSPSFIEGLTLE 479

Query: 61  GPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFTSQ 112
           GPIGHAARK+AYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTT TNVFTSQ
Sbjct: 480 GPIGHAARKMAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTLTNVFTSQ 531

[Close]
BLAST of Cucsat.G6761.T11 vs. ExPASy TrEMBL
Match: A0A1S3B524 (alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486095 PE=4 SV=1)

HSP 1 Score: 209 bits (533), Expect = 3.31e-63
Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 0 

Query: 1   PATAQQVAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGLSLE 60
           PATAQ VAFQQADF GWNLWAAINNR LLPFRYQNLGEMMTLGRNDASVSPSFIEGL+LE
Sbjct: 418 PATAQ-VAFQQADFAGWNLWAAINNRPLLPFRYQNLGEMMTLGRNDASVSPSFIEGLTLE 477

Query: 61  GPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFTSQ 112
           GPIGHAARK+AYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTT TNVFTSQ
Sbjct: 478 GPIGHAARKMAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTLTNVFTSQ 528

[Close]
BLAST of Cucsat.G6761.T11 vs. ExPASy TrEMBL
Match: A0A5D3BSY0 (Alternative NAD(P)H-ubiquinone oxidoreductase C1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold145G00420 PE=4 SV=1)

HSP 1 Score: 209 bits (533), Expect = 3.45e-63
Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 0 

Query: 1   PATAQQVAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGLSLE 60
           PATAQ VAFQQADF GWNLWAAINNR LLPFRYQNLGEMMTLGRNDASVSPSFIEGL+LE
Sbjct: 420 PATAQ-VAFQQADFAGWNLWAAINNRPLLPFRYQNLGEMMTLGRNDASVSPSFIEGLTLE 479

Query: 61  GPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFTSQ 112
           GPIGHAARK+AYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTT TNVFTSQ
Sbjct: 480 GPIGHAARKMAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTLTNVFTSQ 530

[Close]
BLAST of Cucsat.G6761.T11 vs. ExPASy TrEMBL
Match: A0A1S3B519 (alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486095 PE=4 SV=1)

HSP 1 Score: 209 bits (533), Expect = 4.51e-63
Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 0 

Query: 1   PATAQQVAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGLSLE 60
           PATAQ VAFQQADF GWNLWAAINNR LLPFRYQNLGEMMTLGRNDASVSPSFIEGL+LE
Sbjct: 433 PATAQ-VAFQQADFAGWNLWAAINNRPLLPFRYQNLGEMMTLGRNDASVSPSFIEGLTLE 492

Query: 61  GPIGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFTSQ 112
           GPIGHAARK+AYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTT TNVFTSQ
Sbjct: 493 GPIGHAARKMAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTLTNVFTSQ 543

[Close]
BLAST of Cucsat.G6761.T11 vs. TAIR 10
Match: AT5G08740.1 (NAD(P)H dehydrogenase C1 )

HSP 1 Score: 175.6 bits (444), Expect = 2.2e-44
Identity = 83/108 (76.85%), Postives = 93/108 (86.11%), Query Frame = 0 

Query: 3   TAQQVAFQQADFVGWNLWAAINNRSLLPFRYQNLGEMMTLGRNDASVSPSFIEGLSLEGP 62
           T  QVAFQ+ADF GWN+WAAINNR LLPFR+QNLGEMMTLGR DA++SPSFIEGL+LEGP
Sbjct: 410 TTAQVAFQEADFTGWNIWAAINNRPLLPFRFQNLGEMMTLGRYDAAISPSFIEGLTLEGP 469

Query: 63  IGHAARKIAYLIRLPTDEHRVKVGISWLTKSAVDSIATIQTTFTNVFT 111
           IGHAARK+AYLIRLPTDEHR  V ISW  KSAVDSIA +Q+  T V +
Sbjct: 470 IGHAARKLAYLIRLPTDEHRFMVRISWFAKSAVDSIALLQSNLTKVLS 517

The following BLAST results are available for this feature:
BLAST of Cucsat.G6761.T11 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8GXR97.3e-4578.70Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial OS... [more]
P737352.0e-1847.92Demethylphylloquinone reductase NdbB OS=Synechocystis sp. (strain PCC 6803 / Kaz... [more]
BLAST of Cucsat.G6761.T11 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146414.11.96e-6598.21alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial is... [more]
KAA0041320.12.18e-6595.54alternative NAD(P)H-ubiquinone oxidoreductase C1 [Cucumis melo var. makuwa][more]
XP_011653891.13.23e-6598.21alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial is... [more]
XP_008442153.16.83e-6394.64PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitoc... [more]
TYK02783.17.12e-6394.64alternative NAD(P)H-ubiquinone oxidoreductase C1 [Cucumis melo var. makuwa][more]
BLAST of Cucsat.G6761.T11 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3R89.50e-6698.21Pyr_redox_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G495230... [more]
A0A5A7TDE51.06e-6595.54Alternative NAD(P)H-ubiquinone oxidoreductase C1 OS=Cucumis melo var. makuwa OX=... [more]
A0A1S3B5243.31e-6394.64alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial is... [more]
A0A5D3BSY03.45e-6394.64Alternative NAD(P)H-ubiquinone oxidoreductase C1 OS=Cucumis melo var. makuwa OX=... [more]
A0A1S3B5194.51e-6394.64alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial is... [more]
BLAST of Cucsat.G6761.T11 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G08740.12.2e-4476.85NAD(P)H dehydrogenase C1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.50.50.100coord: 1..93
e-value: 1.3E-14
score: 55.7
NoneNo IPR availablePANTHERPTHR42913:SF4ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE C1, CHLOROPLASTIC/MITOCHONDRIALcoord: 1..110
NoneNo IPR availablePANTHERPTHR42913APOPTOSIS-INDUCING FACTOR 1coord: 1..110

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G6761Cucsat.G6761gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G6761.T11.E1Cucsat.G6761.T11.E1exon
Cucsat.G6761.T11.E2Cucsat.G6761.T11.E2exon
Cucsat.G6761.T11.E3Cucsat.G6761.T11.E3exon
Cucsat.G6761.T11.E4Cucsat.G6761.T11.E4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G6761.T11.C4Cucsat.G6761.T11.C4CDS
Cucsat.G6761.T11.C3Cucsat.G6761.T11.C3CDS
Cucsat.G6761.T11.C2Cucsat.G6761.T11.C2CDS
Cucsat.G6761.T11.C1Cucsat.G6761.T11.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G6761.T11Cucsat.G6761.T11-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019646 aerobic electron transport chain
biological_process GO:0042372 phylloquinone biosynthetic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003955 NAD(P)H dehydrogenase (quinone) activity