Cucsat.G6544.T5 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCTTGTGGGTCCTTTCTCCCTTAGTCCTTGTACACACCTGATGCAGTCAACTATCAACATGGAAACAAAGCCAACAATTACTCCATTACCCATAGCCCATTAGCCCCATAGCCCCATAGCCATTTTTAGGCGATTGATTGCTTCAAAACCCAACCGCGAAAATGGAACGTGGTCTTGTGTCAGCGGACAGAGGGGGAAAACCCCAGTTACTCTCTAACTCCACGCTAAGTTTCGGTGAAATGCCTCTGTATAAATTCTGTTCTTCAATCCACCTTCTTCTCACATTTCCAGTCTTTGTAGACAGCCATGGGCGAGTTCAAGCACCTTGTTGTTGCCAAGTTTAAGGAGGGTCTGAATGTGGATGAAATTGTTGCGCAAGTGGAGAAGATGGTTTCTGATATTGACTCTGTCAAGTCCTTTGAGTGGTATCTCTCTCTCATCTAAACTCCCCTCTCATCCTGTTAATCCATGTTGTTATATCTGATTCCAAGTTATAATAATTGTAACAATTTTGTGTTCTCCTTTGGATTCTAGTCGATGGATACTTCAATTTAGATAGAGACAGTACCCTACTAATAGTTGATTTATTTAATTGATTAAAGTTCAAAATTAAATGCTTTTGAAAAAAAACATAGAGTGTTATCCCTTGCAAGTGATGTTTGGAACTTGAACAATGGGTAATGCAAATATACTACTGCTTGGCTTTGGACAGGGGACATGATGTGGAAGGCCAAGACATGCTGACACAAGGCTTCACACACGTCTTCTCAATGACATTTGATGACAAAGAAGCCATCACTTCATTTCTTACCCATCCTAAACACCTTGAGTTCTGCCCCACCTTCAGTGCAGCCATTGACAAGATTGTAGTCCTTGATTTCCCATCTATTCTCGTCAAAGCAGCTGTGCCACCTCCATCACCACAACCACCGCCAGCATTGGAAGAAACACCAGAAGCTGCTGTGCCACCTCCATCACCACAACCACCGCCAGCATTGGAAGAAACACCAGAAGCTGCTCTGCCACCAGTGTTGACATCTACACCTCTACCAACACCTGCCACTGCCGCAGCCGCAACACCGGCATCTGCTTCAGCATGATATAGGAGGCTTCAAAGACAATGTGGCATTGTCCAACGTTAAAAGAATAGTACTCTCTAATCTTTATTTGCAGTATGTACTCTTCTGTTGCTTTTATAATCATGGAAAGTGAAGTCTTTTCTGAATGGGAAGAAAGTGGTTGATGATCCATGCATTTGCTTGCAAGGTAGTGTAATACGTACTTTCTTTGTTGTTTTTGTTTCCCTGATTGCTGATTTGATGATGATAGCATTCACTCTTGTTCAAACATAAGAGGACCCATTTTACAAAGTTTGTCTGCCACTATGTTGTCTTAAACACTCTTTTGTTGGATGATCTGTAATTACTTGCCTAGATTAACCGAGATAGGAAGAGAGAAAAAGTAAATATAAATTTTAGTATATAACTCTGTTAAAATGTTTCCTCCGTCGCTTTAAATCGCATGTTTGAAATGACTTTTTAAGTGTTTATATAGGTATTTATAAGTGTAAAAGAAGTGTTTGTAAACTCTTAAAAAGACAATGCAAATGAACACCAACGGTTAGTTTTCATTCCATCGAAATCATGGAATTAATATTATCCTTTTAGGGTGTTTAGGCCCCAACTTCAAATGAGTTAACCCCATCGACTTCGTGTGTGTTTGATCCAAAAAGTTGAGAAGTAGCGTTGTGAACTCCACTACTTGTTTGACTCAACGAGTTCGTGAGTTTCACTACTAAAAACATCAATGGTATATCTTATTAACTCTTTACAATATGACTTTAAGAGTTAATAATAACATCTTATTCCTCCTTATTCCACTCCTTAACCTGAACACTCATTTATGTTCGGGACTTTAGTAGTTGGTGTTTTCAACTATTTTAACTTACACTTAATTATAATATTAATATTTCTTATTCATGCTCTCTCTTCTTCTTTGTTAAAATTTTTACTCATACTCACATTTCTTTTCGTTAAAGGTTTATTATCATGTATTGTGTCAAAAATAGTTTGCATTCCAAATAGATTGTAATAGTCATAGACTATAATAACCATGCTCCAAACATTTCCTAAAAGAGTTTTTTGTCCGAATAGTTTTGATGTATGAAATCTAACATTTTGCATACTACTTTATACATGTTATTCGGTTAGGGATTGTTATGTTTATCATAGAACTAACACAATCCTTATTTCTCTCCCACTTTGTTGCATTTTAAGTGAGAATATTGGGGTGGAGAAATCTATGGATTACATTTCTGTTATTTTTCTTTCTGTTTATTATGAATGTCCATCCAAATAACACAACTTGAAAACTAAATCTGCAGATGTTGGATATGATTCATATCCAGCACTATAGACGTAGCCTCATCAATGCTCTCAGCTTTGATTTTTGCTTTTGTTTTCTTTATTTTAAAGGGAATCTATAAAAGGAAGAGAGAGTCAATAATTTACTGCGAAAGTGACAGACATGATAGGAAGAAAATGAGATTTCTTAAATTGTAAAAACTGAAAAATGTTCTTTTGTTTTGGATTCTAAAGAAGCCTCGATCTAAGAGACCACCACAAAAAAGAAAAAAAAGAAACACAAAAGTTGATTCTCCATTATCATCACTCTGTATTCAAACATATCAGTTTTTAAACTTCATCCATTTGACAAATCAGACCAGAAAGAACAAAGAAAACAACAAAATGCAGAAAATCCAGAGTTTTCATCTTCTACAGTCCTTTCTGTTCCTGAATTTTTGCTTATGTTCTTCCATTTCTCAGGAAAATGACCCAACGTCTTGTGGTAAATTCCAAATTCAACCCCCTTTCCTGAGTTCTTCTAATCTAAATGGGCCCTTCCCATTAAACCATGTGATTCTCTGCAGATCTCAGAAACTGTATTTCAGAACTTCAATTGGCCTTTTCCCCATCTCCAAAATTGATTACACCACAAAAACTCTTATAATCTCCAATTTTCTTTCTTCTTCACACCATTTTGTTTCCCCTTCCCTTTTATCCTCAGGGCTTCCTTCACCACCACACCTTATCAACTCACTCCTCCTCTTCAACTGCTCTAACCCAACAAAACCTATCACTGAATCTGCCCAAAACTGCCCAAAATTTGAAGCTTTACAAAACCAAGATGAAGAACAAACATCCCAAAAATCTTCTTGTTTGATCTTTGAGGATCTTGGAAAGCTTCAGGAGAGCTTCCATCCAAATGACTTGAAATGCTCCCATTTCAGAAGGGTTTACAGAAACTCCTCAGATGTTGAACTTAAAAATGGATACAAATTGGGAACTTCAATCTCCTTTGACATTCCTGATCATGTTCCTAATCCGTGTCATGAGTGTGAGAAGCCTGATGGGCATTGTGGAGTGGGTTTGAGATGCATATGCCATGTTCTTGATTGCAGTATGTTTCTGATTCTTCGATCTTACCAAGTTAATATTTAGTTTTTTATATTTAATTCCAGATTCATGATATTTACTGCTTGTTCTATGATTTTGCAGAAGATAAGGTGTTTTCTAAGGGTGGAATTGTCAGACCTTGTGGTAAATTTCTCATTTCTTTGCTGGCTGTTTTTGTGGTGATCATTATTTCCATGTAATGCATATTAACTTTTCTCATTCAATGATATACATGAAATCTGACTTGGTTTATTTGTATTGACTTGTCTATATTGCATCTAGTAAAGAGGTGATCTTTCACCAATATTTTTGGTATGTTAAAAATAAATTACATCAAACAGTAAGGTTCTCCCACTTAGGATATGAAGTCAGGATCTATCCATTCTGAATCATATCAAATATGACTTAGTAGTGATCTCTATGCATTTGTGAGAATCTCTTTTCATTATGGTTTCTCCAACTAAATTACAGTGTTTCTCTAACTTACACACAATATTATTGAAACTTACAGGGTGCATGTCCAAGGAATTTCCCATTCCCAATTCAATTGGATTAAGTATAACAAATTTTAGAAGTTACAAAAATTAATTGATCTATCCATTCTAAGTTTGAATCATATATCTAGAATGAAACTCTAAGGCCCAGCTGGGCAATCGTTTTGTTTTTTTAAATTAACCATGTTTTCCTTCTATCTCTTATCATGATGGCACTTTTTAAAATATATTGATACACTTCTTAATCAAATTTAAAAAACAAAAACAACCTTGCAAACGTTTTAGTTTTTTTCTCTAAACCACGGATAGAACGTAGAAAACAAAAAGAAAAATTCAGATGTGAAAATAGTGTTTATAGGCTTGATTTTAAAAAACGAAAACTGAACTATCAAATAGGTTTAAACTTTTAATTGTGTGTGAAAGATGTGAAGATTTAAAATTCTAAAAAACGTATAGCTTTTTCATAGATCACATCCACCCAAACAAATCAACCCTAAATTTATAGTATGAACCTAGCTTTTTTTATAAATAAATTCAATTTCGTTGGATCAGATCATATTAGACGTCATTAACGGTTATAATAAGAAAAATTGTATCAAATGATAAAAACATTTAAATAAAGCAGTCCATGCCATTTTTTTTTCAAATATAAAAAATATATTTTACAATTTAAAATAATTCTATTATTATATTTTTTTTTCTATTTTCGCTAAAAAAAAATAAAGCATAATAATAAAGTAATGAATTATCACAATCTAGTCTCTTATAAATTGATTGAGTTATGGTCTAAAAATAAATGAGAATATACTAACAAATAGAAAGAATTTTAAGGAAGTTAAAAAGTTGAAATATCCTAAATCATTTAAATGAAAATGAAAATAATAGGTTTTTTTTATTCAAAGAATTATTTTAATAAATGAATGTATATATCCAATCTTAACCATGATTTCATCTCAATTAGGATTAGAAACTCAACATGTGTTTTTTATTCAATTTTTTTTTAATAAACTAATGTATATATCGATCTTAACCATGATTTCATCTTAATTTTCATCCCAATTCGAAATTCATACACAAAACAATACTACCATGAGAGAATAAAATTAAAGATAAATATATAATTGAATAAGAAAAAAAATATTTCTAGAATTCTCTAGCAATGGTTGAAATTATCATTATATTATCAATTACTTAAATGATAATTGCTTAATTGAGGTCATGTCTTCGAAGTATTATTTTTGAGCTGCAACTATTTACAAAAATCTCGATGGATATGATAAAGATGTGCAAAAGATAAAAAAAAAAAAAAAGAAAATTAATCTTGTTTAAATCTTAATCTCACACCGTGAAAGATTTATAATATTTCATAAAAATAATCCAACTTTGCTTTGTAAATTTTGACGATCAAAATTTTGCCAAACTAAAGAATATAATAAAAGATAATGTACATTGTATGGCATCAAATCATACCAACTAACATTCTATTAACTATTTTATTCTAAAAAACATTTAAAAATATAAATATTTTTAAAAATAAAATAATAAAATTACTTTAGTTTCTACTGTCAAAACCTAATAACATAAAATATTTCCAAAAAAAAAAAAAAGCATAAAAGAAGACAAACAAATACTTCGTGTTGAAAATAGTTATTATTGAATGAATAAGCAACTAATTTCTTTTGCATTCAAGTAAACGATACGTGCATATTGACTTTGTATTTACAACATTTTGATTGTTTATTTTCAAACTAAGATAGTCGAGACAAAACTAATTGTGATAGGTTTTCAACGTTTTTGGATGTCTTGATAATAATGTGTCTTAGTGTAATGGAAGTTCTTGCTCTTAAGATCAGTCAGGTAGTTCAATATCACTTAACATTTGTTACTGTGACTTTTAAATCTGTCGTTCACCTTCATTCCTTAAACTGCACATTACATTTCTAATCAGATATTTTCCCACCTCATTGTTTTTCTTATACTGCTAATGTAGTTAGTTATTCTCCCTCTTCTCTTCTTCTGTTGAATTAAAATATAATGGAATATTAGCAGCTAAATGGGCCTTATTGGTCGTTGGTATTTATTTGTTTGTATCTATATGGATCTTAATTTTTGTGGTTATGACAACTAACAAGCACTTTGCATGTTTCTTTAACTTCACAACAATTTATAATCGGCTTGATTGCAGAAAGTTGAGCGTTTGCGGGCAAAAGTTAAA ATGGGCGAGTTCAAGCACCTTGTTGTTGCCAAGTTTAAGGAGGGTCTGAATGTGGATGAAATTGTTGCGCAAGTGGAGAAGATGGTTTCTGATATTGACTCTGTCAAGTCCTTTGAGTGGGGACATGATGTGGAAGGCCAAGACATGCTGACACAAGGCTTCACACACGTCTTCTCAATGACATTTGATGACAAAGAAGCCATCACTTCATTTCTTACCCATCCTAAACACCTTGAGTTCTGCCCCACCTTCAGTGCAGCCATTGACAAGATTGTAGTCCTTGATTTCCCATCTATTCTCGTCAAAGCAGCTGTGCCACCTCCATCACCACAACCACCGCCAGCATTGGAAGAAACACCAGAAGCTGCTGTGCCACCTCCATCACCACAACCACCGCCAGCATTGGAAGAAACACCAGAAGCTGCTCTGCCACCAGTGTTGACATCTACACCTCTACCAACACCTGCCACTGCCGCAGCCGCAACACCGGCATCTGCTTCAGCATGA MGEFKHLVVAKFKEGLNVDEIVAQVEKMVSDIDSVKSFEWGHDVEGQDMLTQGFTHVFSMTFDDKEAITSFLTHPKHLEFCPTFSAAIDKIVVLDFPSILVKAAVPPPSPQPPPALEETPEAAVPPPSPQPPPALEETPEAALPPVLTSTPLPTPATAAAATPASASA Homology
BLAST of Cucsat.G6544.T5 vs. ExPASy Swiss-Prot
Match: Q9FK81 (Stress-response A/B barrel domain-containing protein At5g22580 OS=Arabidopsis thaliana OX=3702 GN=At5g22580 PE=1 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.7e-29 Identity = 62/102 (60.78%), Postives = 76/102 (74.51%), Query Frame = 0
BLAST of Cucsat.G6544.T5 vs. ExPASy Swiss-Prot
Match: Q9LUV2 (Stress-response A/B barrel domain-containing protein HS1 OS=Arabidopsis thaliana OX=3702 GN=HS1 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.6e-16 Identity = 37/98 (37.76%), Postives = 67/98 (68.37%), Query Frame = 0
BLAST of Cucsat.G6544.T5 vs. ExPASy Swiss-Prot
Match: I6WU39 (Olivetolic acid cyclase OS=Cannabis sativa OX=3483 GN=OAC PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 6.3e-08 Identity = 29/95 (30.53%), Postives = 52/95 (54.74%), Query Frame = 0
BLAST of Cucsat.G6544.T5 vs. NCBI nr
Match: XP_004139472.2 (stress-response A/B barrel domain-containing protein At5g22580 [Cucumis sativus] >KAE8652800.1 hypothetical protein Csa_022697 [Cucumis sativus]) HSP 1 Score: 307 bits (787), Expect = 6.35e-105 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Cucsat.G6544.T5 vs. NCBI nr
Match: XP_008461858.1 (PREDICTED: stress-response A/B barrel domain-containing protein At5g22580-like [Cucumis melo]) HSP 1 Score: 239 bits (610), Expect = 3.14e-78 Identity = 136/168 (80.95%), Postives = 138/168 (82.14%), Query Frame = 0
BLAST of Cucsat.G6544.T5 vs. NCBI nr
Match: KAA0040939.1 (stress-response A/B barrel domain-containing protein [Cucumis melo var. makuwa] >TYK20318.1 stress-response A/B barrel domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 239 bits (610), Expect = 2.57e-77 Identity = 136/168 (80.95%), Postives = 138/168 (82.14%), Query Frame = 0
BLAST of Cucsat.G6544.T5 vs. NCBI nr
Match: XP_038893880.1 (stress-response A/B barrel domain-containing protein At5g22580-like [Benincasa hispida] >XP_038893881.1 stress-response A/B barrel domain-containing protein At5g22580-like [Benincasa hispida]) HSP 1 Score: 234 bits (598), Expect = 2.34e-76 Identity = 134/168 (79.76%), Postives = 138/168 (82.14%), Query Frame = 0
BLAST of Cucsat.G6544.T5 vs. NCBI nr
Match: XP_022142413.1 (stress-response A/B barrel domain-containing protein At5g22580-like [Momordica charantia]) HSP 1 Score: 209 bits (531), Expect = 4.23e-66 Identity = 119/168 (70.83%), Postives = 129/168 (76.79%), Query Frame = 0
BLAST of Cucsat.G6544.T5 vs. ExPASy TrEMBL
Match: A0A0A0LY53 (Stress-response A/B barrel domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G151000 PE=4 SV=1) HSP 1 Score: 266 bits (681), Expect = 2.31e-89 Identity = 149/168 (88.69%), Postives = 149/168 (88.69%), Query Frame = 0
BLAST of Cucsat.G6544.T5 vs. ExPASy TrEMBL
Match: A0A1S3CFK4 (stress-response A/B barrel domain-containing protein At5g22580-like OS=Cucumis melo OX=3656 GN=LOC103500356 PE=4 SV=1) HSP 1 Score: 239 bits (610), Expect = 1.52e-78 Identity = 136/168 (80.95%), Postives = 138/168 (82.14%), Query Frame = 0
BLAST of Cucsat.G6544.T5 vs. ExPASy TrEMBL
Match: A0A5A7TI03 (Stress-response A/B barrel domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold708G00480 PE=4 SV=1) HSP 1 Score: 239 bits (610), Expect = 1.25e-77 Identity = 136/168 (80.95%), Postives = 138/168 (82.14%), Query Frame = 0
BLAST of Cucsat.G6544.T5 vs. ExPASy TrEMBL
Match: A0A6J1CN73 (stress-response A/B barrel domain-containing protein At5g22580-like OS=Momordica charantia OX=3673 GN=LOC111012552 PE=4 SV=1) HSP 1 Score: 209 bits (531), Expect = 2.05e-66 Identity = 119/168 (70.83%), Postives = 129/168 (76.79%), Query Frame = 0
BLAST of Cucsat.G6544.T5 vs. ExPASy TrEMBL
Match: A0A6J1I2Y7 (stress-response A/B barrel domain-containing protein At5g22580-like OS=Cucurbita maxima OX=3661 GN=LOC111468537 PE=4 SV=1) HSP 1 Score: 199 bits (506), Expect = 9.71e-63 Identity = 108/138 (78.26%), Postives = 118/138 (85.51%), Query Frame = 0
BLAST of Cucsat.G6544.T5 vs. TAIR 10
Match: AT5G22580.1 (Stress responsive A/B Barrel Domain ) HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30 Identity = 62/102 (60.78%), Postives = 76/102 (74.51%), Query Frame = 0
BLAST of Cucsat.G6544.T5 vs. TAIR 10
Match: AT3G17210.1 (heat stable protein 1 ) HSP 1 Score: 87.4 bits (215), Expect = 1.2e-17 Identity = 37/98 (37.76%), Postives = 67/98 (68.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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