Cucsat.G6388.T14 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TAAGGATGGAAACTATCATTTTCCCATGAAGCATGTGCAAAACATGTTTGTGTAGATAGCACAACTATAAACAAAACATGAATAAATTAAGGTACTTAAAACTGATTAAATATAACTAAAAGAAAATGTTTAAAAACATCTACAAACAGTAACAATATGCTTTTTGAAGAATGGAAGAACTTCAGGTTTGGAGAGAGTCAATACCACGACCTAAAGTACCAAAAAAATCAAAACTAGTCACATTGCTCAGATAGAATGATGATCAGCTTCCAGAAGGGTGCCCCAGGACCCACTAACCATTTGGCCACTTGAATGGATAGCATAAGCCAACCAATTCTTTTGTAAGGATCCCTATGTTTTCTTTACCACATCATCTCAAACTATTGGAGGTACGCAAGAAGAGTTTGACACTCTTATTAATAAATAAGCAATGAGTTAAACTATGGAAACACCTTTTTTTCTCATCACCCCTCTAAACTGAAGACATCAAAATTCAGGTTTCTGAAGCACAACCAGAAAGATGAAGGTAAAGTTAATTCTGCATTAATTCTTGTAGGGTGTTTCTGTCTAAATACTAAATGATGCTCTGGTTTTTTTCCACATAGCTACTTGGTTGGATGCACCGTAAATTTCGGCAGAACAGTGGTGAACCGCTCAAAGATTTTGCCATTGGTAAATCTTAATTCCTTCAACTACTAAACGATATACTTAATGTATTTGTGTAACAAAGAGATCGTTGATATTCTTATATTGTTCTCTATAGGCCAACAATCGCTTGATGATCAGCAATACATCTCAAAGTCAAGCATTAAACCTTTCAAGCAATCCCAACGAGAACAGCACCTTCGAAAATCTTTTGCTGGTCTAGAATCAGAAGTGGGGGACGAAGACTACGAAGATGAATCATCTCATCCTATGTCTGAGATCTTCCATGGATTTCTTGCAATTGGAACTCTAGGATCTGAACAAGTTATCGGTGACCCAATGACACCAAAGTTTTCGATTTCCGTTGAGAATATAACGGAAAATGAAACTGAAGTAACAGAAAATGAACTGAGGCTTATTAATGATGAGTTGGAAAAAGTTCTAGGAGCTGAAACTAAGGATGACGGATACAATGATTCCTCTGGAAGAAACAGTTATGTCAGCATGGGAAGGAGCAGCCATGGTAGCACCATTACCCTCAGTGGCAAGCCAATGGATGGCCTAGAAAGCAATTTGAGTGGGACCATCATCTGCCCACTTCAGGGATATCTTTTTGGGTCAGCTATTGAATTGTCAGAGACTACAACAACAGTGGCTAAAAAAGAAAACAGAACCTCCCTTGGCGAGCTGTTTCAGAGAAGCAAAATAGCTGAAGAGAATGCAGGTGCAAAATTTGACAAGGAAGACAAACGAGCTGAAGAAGATATTGAAAAATCTGCCATGCACCTGATGAAAAAGAAACTGAAGAAAAGAATGCTGTCTGCTTCTTCCAGGAGCTCTGCTACAGCTGTTGAAGGCCTAAATGATTCTGCTTCAGCAGAAACAAAACTGCATAAGGTATGCCAAACAATGATTTAAACTTAACTCTTGCTTCCAATGTTTCAAAGAATTTATCAATAGCGCAACGCATAGATAGCCCGGGAACAATCAACAAAAATCTATAAGATGGTACCTTAGAACACTCAATCCAAAGAATCAGGAATCAGGATCAATGCAAACCTGCCGAAACCCCTCATGCCACTTTTCTTTTTCCTTTTCAACTCTTGGGATAAACAGTTTAAATTACTGTCTGACCTCATCTGAGTATTAGTTTTCCAACTGTATAAATTTTTAAACTAGGAGGTAGTTCAATTGAGAGGCTTTAGAAACCTATTTAACCATAGAGAACTAATGAGCCCAAATGAATTTTTACTGTTTTCCTATCTATGAATAATTGTTAAAGAAAATTCAACATATGAGATGTGGATTGCAGATTTTTCACATGTTCCACAGAAAAGTTCACCCTGAAAGCTCAGCAATCATACAGAAGTCTGATAAACACCCAAAGGTTCAGAAAAAAAAGAAAGCAAACCATAACCATGATGGTTGCTGCAACAATGGAGAGCAGACATCTGATGAGGATATCATGATATATCCCCAGAGAACACGGTCGAAACCAAGCTTTCAATGCGTCAAGAATCAATTTCCACCACATTATGGACTAAACAGCTCTGATCCAAATGACAACAAAGAACGCTGGATTAATTCAGATGAAGACTGTAAGTTAATGAACTCATCATCTCCTATTTCCCAACATTCACCTAGATGTCCTATTAGTTTTCATAAACACTAATATCAGCACCCACAAGCTACAAATTAATACTCTTAAATTATAAGAACTAAAATTCAACTCATAAGAACTACAATTCAACTCATTGTAGTCCTGACCTAGTATTTATGCTTACCTTCCACAAAAATAGTAGCTTATCATTTTTCCTATATTTTTTTTTCTTTTTGACAATATTGGTGGTGGGGTATCCAACCGGTTGATAGTACATACTTGAAGTAGGTCGAGCAGTACTCATTTTGGCATCCTTTTTTCTGTATCTGCTAAACCATTGATTGCTCACTGCATTATTTAAACAATTATTTGAGAGACAAATGTCTGCACTGACTCATGCAACTCTAATTATTATGTTCATCATAGATCTAGTGCTGGAGCTTTGAGAGGTAGAAGAAGCAAATTCCGTGTTCATCACTAGCCGAGTGTGTTGCAGTA ATGTATTTGTGTAACAAAGAGATCGTTGATATTCTTATATTGTTCTCTATAGGCCAACAATCGCTTGATGATCAGCAATACATCTCAAAGTCAAGCATTAAACCTTTCAAGCAATCCCAACGAGAACAGCACCTTCGAAAATCTTTTGCTGGTCTAGAATCAGAAGTGGGGGACGAAGACTACGAAGATGAATCATCTCATCCTATGTCTGAGATCTTCCATGGATTTCTTGCAATTGGAACTCTAGGATCTGAACAAGTTATCGGTGACCCAATGACACCAAAGTTTTCGATTTCCGTTGAGAATATAACGGAAAATGAAACTGAAGTAACAGAAAATGAACTGAGGCTTATTAATGATGAGTTGGAAAAAGTTCTAGGAGCTGAAACTAAGGATGACGGATACAATGATTCCTCTGGAAGAAACAGTTATGTCAGCATGGGAAGGAGCAGCCATGGTAGCACCATTACCCTCAGTGGCAAGCCAATGGATGGCCTAGAAAGCAATTTGAGTGGGACCATCATCTGCCCACTTCAGGGATATCTTTTTGGGTCAGCTATTGAATTGTCAGAGACTACAACAACAGTGGCTAAAAAAGAAAACAGAACCTCCCTTGGCGAGCTGTTTCAGAGAAGCAAAATAGCTGAAGAGAATGCAGGTGCAAAATTTGACAAGGAAGACAAACGAGCTGAAGAAGATATTGAAAAATCTGCCATGCACCTGATGAAAAAGAAACTGAAGAAAAGAATGCTGTCTGCTTCTTCCAGGAGCTCTGCTACAGCTGTTGAAGGCCTAAATGATTCTGCTTCAGCAGAAACAAAACTGCATAAGGTATGCCAAACAATGATTTAA MYLCNKEIVDILILFSIGQQSLDDQQYISKSSIKPFKQSQREQHLRKSFAGLESEVGDEDYEDESSHPMSEIFHGFLAIGTLGSEQVIGDPMTPKFSISVENITENETEVTENELRLINDELEKVLGAETKDDGYNDSSGRNSYVSMGRSSHGSTITLSGKPMDGLESNLSGTIICPLQGYLFGSAIELSETTTTVAKKENRTSLGELFQRSKIAEENAGAKFDKEDKRAEEDIEKSAMHLMKKKLKKRMLSASSRSSATAVEGLNDSASAETKLHKVCQTMI Homology
BLAST of Cucsat.G6388.T14 vs. ExPASy Swiss-Prot
Match: Q5XV40 (Protein LAZY 1 OS=Arabidopsis thaliana OX=3702 GN=LAZY1 PE=1 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.8e-23 Identity = 92/235 (39.15%), Postives = 140/235 (59.57%), Query Frame = 0
BLAST of Cucsat.G6388.T14 vs. NCBI nr
Match: XP_016902488.1 (PREDICTED: uncharacterized protein LOC103498856 isoform X2 [Cucumis melo]) HSP 1 Score: 483 bits (1244), Expect = 3.10e-169 Identity = 259/264 (98.11%), Postives = 262/264 (99.24%), Query Frame = 0
BLAST of Cucsat.G6388.T14 vs. NCBI nr
Match: XP_008459858.1 (PREDICTED: uncharacterized protein LOC103498856 isoform X1 [Cucumis melo]) HSP 1 Score: 483 bits (1244), Expect = 3.45e-169 Identity = 259/264 (98.11%), Postives = 262/264 (99.24%), Query Frame = 0
BLAST of Cucsat.G6388.T14 vs. NCBI nr
Match: KAA0039821.1 (protein LAZY 1 isoform X1 [Cucumis melo var. makuwa] >TYK24676.1 protein LAZY 1 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 483 bits (1244), Expect = 8.92e-169 Identity = 259/264 (98.11%), Postives = 262/264 (99.24%), Query Frame = 0
BLAST of Cucsat.G6388.T14 vs. NCBI nr
Match: XP_038874321.1 (protein LAZY 1-like [Benincasa hispida]) HSP 1 Score: 477 bits (1227), Expect = 1.33e-166 Identity = 256/264 (96.97%), Postives = 262/264 (99.24%), Query Frame = 0
BLAST of Cucsat.G6388.T14 vs. NCBI nr
Match: XP_011656805.1 (protein LAZY 1 [Cucumis sativus] >KGN46453.1 hypothetical protein Csa_005055 [Cucumis sativus]) HSP 1 Score: 466 bits (1199), Expect = 1.89e-162 Identity = 253/264 (95.83%), Postives = 255/264 (96.59%), Query Frame = 0
BLAST of Cucsat.G6388.T14 vs. ExPASy TrEMBL
Match: A0A1S4E2P2 (uncharacterized protein LOC103498856 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498856 PE=4 SV=1) HSP 1 Score: 483 bits (1244), Expect = 1.50e-169 Identity = 259/264 (98.11%), Postives = 262/264 (99.24%), Query Frame = 0
BLAST of Cucsat.G6388.T14 vs. ExPASy TrEMBL
Match: A0A1S3CCD5 (uncharacterized protein LOC103498856 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498856 PE=4 SV=1) HSP 1 Score: 483 bits (1244), Expect = 1.67e-169 Identity = 259/264 (98.11%), Postives = 262/264 (99.24%), Query Frame = 0
BLAST of Cucsat.G6388.T14 vs. ExPASy TrEMBL
Match: A0A5A7TDT7 (Protein LAZY 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002260 PE=4 SV=1) HSP 1 Score: 483 bits (1244), Expect = 4.32e-169 Identity = 259/264 (98.11%), Postives = 262/264 (99.24%), Query Frame = 0
BLAST of Cucsat.G6388.T14 vs. ExPASy TrEMBL
Match: A0A0A0KAF6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094710 PE=4 SV=1) HSP 1 Score: 466 bits (1199), Expect = 9.15e-163 Identity = 253/264 (95.83%), Postives = 255/264 (96.59%), Query Frame = 0
BLAST of Cucsat.G6388.T14 vs. ExPASy TrEMBL
Match: A0A6J1DQ75 (protein LAZY 1-like OS=Momordica charantia OX=3673 GN=LOC111022563 PE=4 SV=1) HSP 1 Score: 456 bits (1174), Expect = 6.68e-159 Identity = 244/264 (92.42%), Postives = 257/264 (97.35%), Query Frame = 0
BLAST of Cucsat.G6388.T14 vs. TAIR 10
Match: AT5G14090.1 (unknown protein; Has 56 Blast hits to 56 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 46; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 111.3 bits (277), Expect = 1.3e-24 Identity = 92/235 (39.15%), Postives = 140/235 (59.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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