Cucsat.G6261.T33 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAGTTACAATGCGCCATAGTTTTCTTCCAATAAGAAAACTTTTCATTTGATTTGCCCATGTGATATAATTTGTACCATCAAGAATTGTACCTATGGGTCTAAAAATATGGTCCCTCTCCATTTGGATTCGCTGTTAACAATGAGAATTTCCGGCTGAATTCGTCTAAAATTTTCTATTGATTCGTGACTGGATTCGTCATATTCTGGATTTTGCAATTGGGATTGCTGATTGGTTTGTAAGGCTGGGAGTCGTGATAGGTGAGCGTCTTCTTGTCTAGGTCGCGGCTGAGTTGCGACGGCGAGGACACGACTGGATTCGCGGCGGTCAGGATTTGTCTTCGCGGCGGTCAGGATTTGTCTTCGCGGCTGGGTTGCAACAATGGACAGAGGGTCACGGCTTACGGACAGAGGGGTTACGGCTGTGAGCGGAGACAAACGAATGAGGACAGTCGGCTAGAAGGTTCGTCGGATCTGGTGGGCGGTGTCGTCTTGGATTCACGACTGGAAGAGGAGTCGCGTGCGGCTTGGGAAGACAGAGGAGTCGCGTGCGGCTTGGGAAGACAGAGGAGTTGCGTGCGGCTTGGAACGGCAGAGATTGTTGCAACTCGGCAACGACTGGTGCTTCAGATCGGAGAGGACGACGCGACGATTTGAACGCCGCGACGCCGAGGCTGCGACTGGACGGAGTGGCGCGACACCTAGGTTGTGACGGAGCGACGTGCTGATACCATGAGCTGCTGAACTTTTCGGCTAGCAGTGGAAGAAAAACGCTAGCACGGGACGGAGATCTACTTTTCGGCTAGCAGTGCTTCTTGGAGTTAAGGAAGACGCGGCGGTTCTCGGGCGGCGGCGGCGGCGACGACGACGGCGGCGGCGGCGACGGCAGTGATTAAAGTAGATCTAGGGTTGGCTCTGATACAATGTGAAAGGTATATTCTATTGATGAAATTTCTGTCTTTTACAATAATACCAAATGATGTATAAATAGCTAATTCAACATAATTAAGGAATGTCATATAATTAGCCTAATGTAATTGTATTTACATTAATACTTAAGAATCAATACCTATAATTTTTCAGATAAGGAAAAAAATTCCAAATAGGAATTGCATAATGTTAGACATGATGCGTAAAACATCACAGAACAAGATGACAAACATTTCATGAGACAAGATGAAGAACAAGGTTATCCAACAGTCACGAACCACACTTCAATTGAAAAAATATAGCCAAGTACACCAAAGCTCTAACAATATATTGTAGTACAATAGGGTGGAGAGATTTAAATCATTGACTTTTTGATCGCTATATATGCTAGGTGGCTGATCAGTCAATTCGCTATAGTTTTTTAGATAGTGCATTTAAATCTTTTGAATTCAAAGTGGTGTCAATTAATGTGATAGAAAGACGTTTTCATATTGTTTGGTGAAGAAATTAAAGTCCTCAACTGCTTATTTTGAAGTTAATTAAATTCAAAAGTTAAACTATTTAAATTAAATTCGATTGCTCTCATACGTAAATTAAATTCTCATATATCAGTTACACATTAGGGGTGCTCATCAATCAGGCAGCGTCAGTTTTGGGATCAAACCGTTGTCTGCTATGACCTCTAATATGAATAAGTTGGTCGTTCTTCATTGGTTTTACCAGCTTCAATAGTTCAAGCTTGATCTTTCAGATTGCCTTATTCACCCGTAAGGTACATAAGTCGTGAAACAATCCACTTTAGAGTGAGTCGTCATTGGTAGGTCCACTTAATATCTCAACAAGGTTGACATCTTCAATGAGTTCACATTATTAAACAGAGAGAACTCTTGATGGGGACAACAAAACCTTTGAAATCTATAGAGATTCAAATCCAATTGATGGGGACAACAAAACCTTCACATATTTTCATAGAATCATAATGGTTTTATATCTTGTCCACCTTGGACATAAATTTATTTCTTTGGTCATCAATCTTCTTCTTTGTTTCTTTCTGTTTATCTAAGAAAAATACCAAACATTTGAAATCTATAGATGAGGGTAACAAAGGATGTGTGAACTTGGTTGAAACATCTTTTGATCCCTCCATATATAGAGAAATATTTACACCCAACTACCCTGCAGTGCATTAAAGAGATTATAAATGAATTGGGTTGATGGCAGCTTCTGGACCATCGCCCTATCTCCGTGTTTTGAAAACATTATATCAGTCACAATTTTATTTTTAGATTTTTCATTGTGTAGTATAGAATTTGGAGATTAAAACATATTCTCGGCTAACAATTGTAAGCGACTATCTGTGTCCTACATTAGCATGGCATTGTTGTATCAATTACAAGTGTGCATCTTGCTTCACTTTCTTTTTCTCATTTCAGTACTTGTGAATTCCCATCATCTGTGTCATCCTAAAGAAAGCTCAGCATTGCTTGAATTCAAGAACACCTTTTGGAAACAAGACTTGGGTGATGAGTTTGTGGGGCAACCTTCTTATCGACCTTATTCCACATGGAATGACAGCACAGATTGTTGTTTATGGGACGGTGTGGAGTGCGAGGACGACGAAGGAGAAGGTAGCCATGTTGTTGGCCTTCATCTTGGCTGCAGTTCACTCCAAGGAACTCTTCATGCTAACACTACCCTTTTCACACTCTCCCAACTCAAAACTTTGAATCTTTCTTATAACAATTTTTCAGGATCTCCATTTTCACCTCAATTTGGAATTCTTACTAACTTGAGGGTTTTGGATCTTTCCTACTCTTCCTTCCAAGGTCATGTTCCATTACAAATATCTCATTTGTCTAAATTAGTTTTCCTTGATCTTTCTTATAATTACGATCTCAGTTTTTCAAATGTGGTTATGAATCAACTTGTTCATAACCTTACCAATTTGAGGGATTTTGGGCTTGCTGAAACAAATCTTTTAGACATCACACCAATTTCTAATTTCATGAATCTCTCTCTCTCTCTGGCGTCTCTTGATCTTTCTTCATCTTACTTGTCCGGGAATTTTCCAAACCACATTTTGGGTCTTCCAAATTTGAAGGTGTTAAGGCTTGATGATAACCCTGATTTGAATGGACATCTATCCATGTCTAGTTGGAGTAAATCTTTAGAAATTTTAGATCTTTCTCGAACTAATTTTTCTGGAGAGATTCCTAGCTACATTGGTGAAGCCAAAGCCTTAAGATACTTAGACCTTAGTTTCTGCAATTTCAATGGTGAAATTCCTGAATCAATTGAAAACCTTACACAGCCTCCTAATCTCCAAATCCATTCTAATAGTTCCCTTTGTTTTCTCAACCTCAACCAACAAGTTTCATCTAATCCATTTCAAAATAATGTTTGTCTTCACACACTTTCAAATATTATTCATTTGGACTTGAGAAATAACTCATTCATTGGTGGCATACCCTCTTGGCCATATTATTCCCCTAGCTTAAAATATTTGGATCTCTCTAATAACCAATTCTTTGGTTTCGTGAGAAATTTTAGATCTAACTCGTTAGAATATCTTGATTTAAGTAATAACAAACTGCAAGGTGAAATTTCAGAGTCTATTTATAAGCAACTCAATCTTACATATTTAGATTTGGGGTCCAATAATTTAAGTGGGGTTTTGAATTTGGACATGTTGAGAATCCCAAGTCTATCGTCGCTTGACATTTCCAATAATCCCCAACTTTCAATTTTCTCAACTACAGTTACCCCTGCAAATCTTCTTTTCATACGAATGGATGGCATCAAATTAGAAAAATTCCCTTTCTTTTTGCAAAATCAAAACAACTTGAGCTACCTAGACCTTTCAAATAACCAAATTGTAGGGAAAATTCCTGAGTGGTTTTCTGAATTGGGTGGTTTGAGTGTTCTGCTTTTATCTCATAATTTTTTGTCTTCAGGAATAGAAGTGATCCACACTATGCCTAAACTGATGATGGTCTATCTTGATTTTAACTTGTTCAATAAACTACCTGTTCCCATGTTGCTGCCATCAGTAACGACTTACTTCAGTGTTTCAAATAATGAGGTTAGTGGAAATGTTCATCCTTCAATTTGCCAAGCCACCAATCTTAACTACCTTGATTTGTCACATAATAGCTTGAGTAGTGAACTCCCATCTTGCCTCTCTAACATGACTAATCTAGACACTTTGATATTGAAAAGTAACGACTTTTCTGGAGTTATTCCCATACCACCAAGGATTAGAAACTATATTGCTTCAGAAAATCAGTTTGATGGAGAAATTCCTCATTCAATTTGCCTTGCACTTAATCTTCAAATTCTCAGTTTTTCAAATAATCGAATGAGTGGAGGAACAATTCCATCATGTCTCACAAACATCACTTCTCTTTCAGTGTTGGATTTGAAAGGTAACAACTTTGTTGGTATGATTCCAACATTTTTTCCTACAGGATGTCAACTGAGCAGCCTTAATTTGAATGACAACCAACTAAAAGGGGAATTGCCACAATCCTTACTCAACTGTGAAAATCTTCAAGTTTTGGATTTGGGGAGTAACAAGATAACAGGTTATGTGTTAAATTTCATCTTTCATTTATTCTTTAATAACAATAATTGGATATTACATGCATATAGCTAGGTTTGACTCTATCTATCTATATAACTTTATTTTCTGATATAGTTTGAATGGATAGATCACAATAAATCTGAAATTGTATTCATATTCTATCTAAGCAGGCCACTTTCCTTATTGGTTAAAAGCGGCTTCAAATTTGCGAGGTCTTATCCTTCGATCAAATCGATTTTATGGCAATATCAACAATTCGTTCAACAAAGACTCTTTCTCAAACCTACGGATTATTGATCTCTCCCACAATAGTTTTAGTGGACCATTGCCTTCAAACTTTTTTAAGAACATGAGAGCCATCATGCAAGTGGACAACAAAAAGTACAGTTCTTTTGATGAAAATGAGGTAGGTGATTATTATCAAGACTCAATTGTTATATCGTTAAAAGGGTTGGATCAAAAGTTAGAAAGAATTCTTTTGATATGGAAAACTATTGATCTGTCATGTAATAATTTTAATGGAGAGATACCAAAGGAAATAGGAATGTTGAGGTCTTTAGTAGGTTTTAACCTTTCACACAATAAGCTTAAAGGTGGTATTCCTACATCACTTGGTAATTTGAACAATTTGGAATGGTTGGATCTTTCTACAAATCAATTAGTTGGTAGAATTCCTCCTCAGTTGATTGGTCTTACGTTTCTCTCCTATTTAAATCTCTCACAAAATCAACTCTCAGGACCAATTCCTCAAGGAAAACAATTTGGTACTTTTAGAAGTCATTCATACTTAGAAAACCTTGGACTCTGTGGGTTTCCTCTAGCAAAATGTGATGCACATCAAAATGACCATAAATCTCAACTGCTGCATGAAGAAGATGTGAGTAATTTGGAAAAGGGGATTTGGTTGAAAGCTGTGTTGATGGGGTATGGATGTGGGATGCTATTTGGAATATTCATTGGGTATCTTGTTTTTCAATGTGGAAAACCTGATTGGATTGTGAGAATTGTGGAAGGCAGAAGAGCTCAAAAGACCCAAACATGTAGGAGGAGTTACAGGCATAGGAAAAGAAATAACTAGAGGTTTATGTTCTGTCAATTTTATGAAAATGACTTCAATTTTAATTTGATCTTTTCTGATTCCTTTCT ATGAGAGCCATCATGCAAGTGGACAACAAAAAGTACAGTTCTTTTGATGAAAATGAGGTAGGTGATTATTATCAAGACTCAATTGTTATATCGTTAAAAGGGTTGGATCAAAAGTTAGAAAGAATTCTTTTGATATGGAAAACTATTGATCTGTCATGTAATAATTTTAATGGAGAGATACCAAAGGAAATAGGAATGTTGAGGTCTTTAGTAGGTTTTAACCTTTCACACAATAAGCTTAAAGGTGGTATTCCTACATCACTTGGTAATTTGAACAATTTGGAATGGTTGGATCTTTCTACAAATCAATTAGTTGGTAGAATTCCTCCTCAGTTGATTGGTCTTACGTTTCTCTCCTATTTAAATCTCTCACAAAATCAACTCTCAGGACCAATTCCTCAAGGAAAACAATTTGGTACTTTTAGAAGTCATTCATACTTAGAAAACCTTGGACTCTGTGGGTTTCCTCTAGCAAAATGTGATGCACATCAAAATGACCATAAATCTCAACTGCTGCATGAAGAAGATGTGAGTAATTTGGAAAAGGGGATTTGGTTGAAAGCTGTGTTGATGGGGTATGGATGTGGGATGCTATTTGGAATATTCATTGGGTATCTTGTTTTTCAATGTGGAAAACCTGATTGGATTGTGAGAATTGTGGAAGGCAGAAGAGCTCAAAAGACCCAAACATGTAGGAGGAGTTACAGGCATAGGAAAAGAAATAACTAG MRAIMQVDNKKYSSFDENEVGDYYQDSIVISLKGLDQKLERILLIWKTIDLSCNNFNGEIPKEIGMLRSLVGFNLSHNKLKGGIPTSLGNLNNLEWLDLSTNQLVGRIPPQLIGLTFLSYLNLSQNQLSGPIPQGKQFGTFRSHSYLENLGLCGFPLAKCDAHQNDHKSQLLHEEDVSNLEKGIWLKAVLMGYGCGMLFGIFIGYLVFQCGKPDWIVRIVEGRRAQKTQTCRRSYRHRKRNN Homology
BLAST of Cucsat.G6261.T33 vs. ExPASy Swiss-Prot
Match: F4J8G2 (Receptor-like protein 33 OS=Arabidopsis thaliana OX=3702 GN=RLP33 PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.5e-39 Identity = 95/228 (41.67%), Postives = 138/228 (60.53%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. ExPASy Swiss-Prot
Match: Q9LJS0 (Receptor-like protein 42 OS=Arabidopsis thaliana OX=3702 GN=RLP42 PE=1 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.2e-38 Identity = 93/223 (41.70%), Postives = 129/223 (57.85%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. ExPASy Swiss-Prot
Match: Q9ZUK7 (Receptor-like protein 18 OS=Arabidopsis thaliana OX=3702 GN=RLP18 PE=2 SV=3) HSP 1 Score: 157.1 bits (396), Expect = 2.4e-37 Identity = 86/212 (40.57%), Postives = 124/212 (58.49%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. ExPASy Swiss-Prot
Match: Q9SRL2 (Receptor-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=RLP34 PE=2 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 5.4e-37 Identity = 86/197 (43.65%), Postives = 118/197 (59.90%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. ExPASy Swiss-Prot
Match: Q9SRL7 (Receptor-like protein 35 OS=Arabidopsis thaliana OX=3702 GN=RLP35 PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 9.3e-37 Identity = 90/214 (42.06%), Postives = 127/214 (59.35%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. NCBI nr
Match: KAE8646716.1 (hypothetical protein Csa_004923 [Cucumis sativus]) HSP 1 Score: 493 bits (1268), Expect = 6.87e-165 Identity = 238/242 (98.35%), Postives = 240/242 (99.17%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. NCBI nr
Match: XP_011656723.2 (uncharacterized protein LOC101205823 [Cucumis sativus]) HSP 1 Score: 493 bits (1268), Expect = 1.51e-157 Identity = 238/242 (98.35%), Postives = 240/242 (99.17%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. NCBI nr
Match: ADN34092.1 (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 331 bits (848), Expect = 5.30e-112 Identity = 166/230 (72.17%), Postives = 192/230 (83.48%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. NCBI nr
Match: KAA0039946.1 (receptor like protein 30-like [Cucumis melo var. makuwa] >TYK24557.1 receptor like protein 30-like [Cucumis melo var. makuwa]) HSP 1 Score: 340 bits (872), Expect = 7.13e-112 Identity = 170/243 (69.96%), Postives = 200/243 (82.30%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. NCBI nr
Match: XP_004153416.3 (receptor-like protein 6 [Cucumis sativus] >KAE8646715.1 hypothetical protein Csa_005309 [Cucumis sativus]) HSP 1 Score: 347 bits (889), Expect = 1.68e-108 Identity = 170/242 (70.25%), Postives = 202/242 (83.47%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. ExPASy TrEMBL
Match: A0A0A0KD25 (LRRNT_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G080350 PE=4 SV=1) HSP 1 Score: 493 bits (1268), Expect = 3.32e-165 Identity = 238/242 (98.35%), Postives = 240/242 (99.17%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. ExPASy TrEMBL
Match: E5GC93 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 331 bits (848), Expect = 2.57e-112 Identity = 166/230 (72.17%), Postives = 192/230 (83.48%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. ExPASy TrEMBL
Match: A0A5A7TCX1 (Receptor like protein 30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001020 PE=4 SV=1) HSP 1 Score: 340 bits (872), Expect = 3.45e-112 Identity = 170/243 (69.96%), Postives = 200/243 (82.30%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. ExPASy TrEMBL
Match: A0A0A0K946 (LRRNT_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G080330 PE=4 SV=1) HSP 1 Score: 347 bits (889), Expect = 1.75e-109 Identity = 170/242 (70.25%), Postives = 202/242 (83.47%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. ExPASy TrEMBL
Match: A0A5A7T912 (Receptor like protein 30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002240 PE=4 SV=1) HSP 1 Score: 338 bits (868), Expect = 5.15e-106 Identity = 169/243 (69.55%), Postives = 201/243 (82.72%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. TAIR 10
Match: AT3G05660.1 (receptor like protein 33 ) HSP 1 Score: 164.5 bits (415), Expect = 1.1e-40 Identity = 95/228 (41.67%), Postives = 138/228 (60.53%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. TAIR 10
Match: AT3G25020.1 (receptor like protein 42 ) HSP 1 Score: 160.6 bits (405), Expect = 1.6e-39 Identity = 93/223 (41.70%), Postives = 129/223 (57.85%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. TAIR 10
Match: AT2G15042.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 157.1 bits (396), Expect = 1.7e-38 Identity = 86/212 (40.57%), Postives = 124/212 (58.49%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. TAIR 10
Match: AT3G11010.1 (receptor like protein 34 ) HSP 1 Score: 156.0 bits (393), Expect = 3.9e-38 Identity = 86/197 (43.65%), Postives = 118/197 (59.90%), Query Frame = 0
BLAST of Cucsat.G6261.T33 vs. TAIR 10
Match: AT3G11080.1 (receptor like protein 35 ) HSP 1 Score: 155.2 bits (391), Expect = 6.6e-38 Identity = 90/214 (42.06%), Postives = 127/214 (59.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|