Cucsat.G5815.T18 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G5815.T18
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionDiaminohydroxyphosphoribosylaminopyrimidine deaminase
Locationctg1402: 337495 .. 339762 (-)
RNA-Seq ExpressionCucsat.G5815.T18
SyntenyCucsat.G5815.T18
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATTTTGTTACATTTCGCTTTTACTTGAAAGAAATTTCTGGATTCCTATTGCTATGTTTAGTTTGAATTTGGTAAGGGATTAGAAATGGTACCGGATAGAGTTTGATTTGACTTGACAGGCTCAGTTAGGGTTTTTCTATTTCCGGATAAACTCGGCGCTTTTTGCTTAGTTAGGTGATTTATTGTTTTTACTTTTTGTTGAAGGAATGCAACTCCAAAATTGACCCCACCTACAACTCTTAATGATGTTCATTCGCCATTAATCTACTATCGCAATCACAACGATAAATTCAGGCTCTGCGACTGCTCTAGATCTAGGGTTTCCAGTTCAGTGCAATGGATTGTTAAATCAGGAAGTTGTAGGGGAGGGCATTCGGTTAGATGTGTTAATGTGATACAAGGCGTTCATTGTGATGTTGATGATGAAGTTTACATGAGGAGGTCTTTGGAGATTGCAAGGAAGGCAATTGGGCATACAAGTCCTAATCCCATGGTGGGATGTGTGATTGTGAAAAATGGGGAAATTGTTGGTGAAGGCTTTCATCCTAAAGCAGGGCAGCCTCATGCTGAGGTAAACCTTTAATCCTAAATTTCTTATCACATTTTCTCTCCTCGTCAGTACTCTTTTCATAGTTGATGTGTTTTGGTTTTACAGTGTTAAAGAACTGCAGATATAAACCTTTTGGTAAAATTGTTCTTGTTAGTTTCTTGTTGAAACCTTATCCATGTATTTTATGATGAAAAAGTGCTGCCCATTTTGTAAACAAGAGATAAAATGAATAGGTATTTGCTCTGAGGGAAGCTGGGAGTTTGGCAGAGAATGCAACGGCATATGTGACTTTAGAACCATGCAATCACTATGGTAGAACTCCACCGTGTACAGAGGCTCTAATAAAAGCCAAAGTGAAGAGGGTGGTGGTCGGCATGGTGGATCCCAATCCAATTGTTGCTTCCAAGGGCGTGCAACGACTAAGAGATGCAGGAATTGATGTGACTGTCAGCATAGAAGAAGATTCCTGCAAAAAGCTTAATGAAGCATATATTCACCAAATCTTGACTGGGAAGCCTCTTCTCACCCTAAGGTAACTTCCATCTGAGAGTTCTTCTAACAAGCATTTTGAGCCAAAAAAAAAAAAACTCACTTTACAAGCACTTTTCATTGAGCACTTCAGTATGTTTGAGACTGATATTGAGATGGTTATAATCATTATCATCACGCTCAATATCACTCACAAATGTACCTCTATCATCAAAGTCACTCCCAAACATGTCACATGTACTTTTTTACCTTTCGGCAAACATCGTGATTTGAGCTAACAATGACCAACGGGAAAGTGCTTTTAACCATGCTGAAAACACCCCTAGAACATATGATCCGTTGTAAGTTCTTTACTAATACAGAACCACACCTGACTGACCACAGGTACACCCTCTCTTTAAACGGTTGCTTCCTAGATCAGGTTGGGAAAGGAGCTGCAGAAGCTGGTGGCTACTATTCTCAACTATTACAAGAGTACAATGCTGTTATAATTTCTCCTCCCTCATCATCTGAGGAGTTCGAAATTCCTTCCTCCAATGAACATGGAGCCAAGCAACCCCTTTGGATCATTCTATCAAGTCCCGATGGTTTGATAACTGTTCCTCGCATTACTGACCCAACTACGAAAGTAGTAATCTTCACAAACAAAGAAGTAGTAGTGAGCGAGAGAGAGATTGAAACGGTAGTTCTGGACCAATTAAATATGAACAACATTTTAAATTACTGCCAGAGCCAAGGACTAAACAGTGTAATGTGGGATGTGAGAGCAAAGTTGGGAGTTCATGAAGAACTAATAAAAGAGGGAATTGAGGAGAAATTGTTGCAAAAAGTAGTAGTGGAAGTGTTGCCACAATGGAGTGAGAGCCAGAGTGAAACTTGGTTCAAGAGTATGGCTGAAAATTTGAAGTTGAAGTGTTTGGAGCCCAGGATGTGTGGACCTAGTGTTGTATTGGAAGCCAATCTCTAGCTTTGGAAATTACAAATTTTCAATTAACACAAATCAAGGTAATACCTTACCATTCTTTTTTTTTTTTCTTCTTCTTAAATATAATTCACTGATTATGAGCTAACTAAATATGATGGTTAAGGCATTGCTTCTCTCTTAAATCTCTTACTTCTTCTATATTTGTGTTGTAATATTATGATGAATAAGTGTAAAACTAGTGGGGGAGACACTTAATTTTTCTAATTTTTTGTTGTTTGAAATCCAATAATCATCTTAGGTTTT

Coding sequence (CDS)

ATGGTGGATCCCAATCCAATTGTTGCTTCCAAGGGCGTGCAACGACTAAGAGATGCAGGAATTGATGTGACTGTCAGCATAGAAGAAGATTCCTGCAAAAAGCTTAATGAAGCATATATTCACCAAATCTTGACTGGGAAGCCTCTTCTCACCCTAAGGTACACCCTCTCTTTAAACGGTTGCTTCCTAGATCAGGTTGGGAAAGGAGCTGCAGAAGCTGGTGGCTACTATTCTCAACTATTACAAGAGTACAATGCTGTTATAATTTCTCCTCCCTCATCATCTGAGGAGTTCGAAATTCCTTCCTCCAATGAACATGGAGCCAAGCAACCCCTTTGGATCATTCTATCAAGTCCCGATGGTTTGATAACTGTTCCTCGCATTACTGACCCAACTACGAAAGTAGTAATCTTCACAAACAAAGAAGTAGTAGTGAGCGAGAGAGAGATTGAAACGGTAGTTCTGGACCAATTAAATATGAACAACATTTTAAATTACTGCCAGAGCCAAGGACTAAACAGTGTAATGTGGGATGTGAGAGCAAAGTTGGGAGTTCATGAAGAACTAATAAAAGAGGGAATTGAGGAGAAATTGTTGCAAAAAGTAGTAGTGGAAGTGTTGCCACAATGGAGTGAGAGCCAGAGTGAAACTTGGTTCAAGAGTATGGCTGAAAATTTGAAGTTGAAGTGTTTGGAGCCCAGGATGTGTGGACCTAGTGTTGTATTGGAAGCCAATCTCTAG

Protein sequence

MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGCFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWIILSSPDGLITVPRITDPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWDVRAKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSMAENLKLKCLEPRMCGPSVVLEANL
Homology
BLAST of Cucsat.G5815.T18 vs. ExPASy Swiss-Prot
Match: Q8GWP5 (Riboflavin biosynthesis protein PYRD, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PYRD PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 7.4e-58
Identity = 125/255 (49.02%), Postives = 184/255 (72.16%), Query Frame = 0

Query: 1   MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 60
           MVDPNPIV S G+ RL+DAGIDVTVS+EE+ CKK+NE +IH++LTGKP L LRY++S+NG
Sbjct: 171 MVDPNPIVFSSGISRLKDAGIDVTVSVEEELCKKMNEGFIHRMLTGKPFLALRYSMSVNG 230

Query: 61  CFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNE--HGAKQPLWIILSS 120
           C LD++G+GA+++GGYYS+LLQEY+A+I+S  S S+E    SS E  + + QP+ II++S
Sbjct: 231 CLLDKIGQGASDSGGYYSKLLQEYDAIILS-SSLSDELSSISSQEAINVSIQPIQIIVAS 290

Query: 121 ----PDGLITVPRITDPTTKVVIFTNKEVV----VSEREIETVVLDQLNMNNILNYCQSQ 180
                  L +   + +   KVV+FT KE V    +S   +ETVVL+++N+++IL+YC ++
Sbjct: 291 NAQQSHILASSHTVEESGPKVVVFTAKESVAESGISSSGVETVVLEKINLDSILDYCYNR 350

Query: 181 GLNSVMWDVRAKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSM--AENLKL 240
           GL SV+ D+R  +   E L+++G E+KLLQKV++EVLP+WS ++ E    SM   E+  +
Sbjct: 351 GLCSVLLDLRGNVKDLEVLLRDGFEQKLLQKVIIEVLPEWS-TKDERQIASMKWLESKHV 410

Query: 241 KCLEPRMCGPSVVLE 244
           K L+ +  G SV+LE
Sbjct: 411 KDLQSKQLGGSVLLE 423

BLAST of Cucsat.G5815.T18 vs. ExPASy Swiss-Prot
Match: B6TRH4 (Riboflavin biosynthesis protein PYRD, chloroplastic OS=Zea mays OX=4577 GN=PYRD PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.7e-44
Identity = 107/247 (43.32%), Postives = 155/247 (62.75%), Query Frame = 0

Query: 1   MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 60
           M DPNPIVASKG+++L+ AGI V V +EE  C+KLNEAYIH++LTGK   TLR TLS+NG
Sbjct: 145 MTDPNPIVASKGIEKLQGAGISVRVGVEEALCRKLNEAYIHRMLTGKAFATLRATLSMNG 204

Query: 61  CFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWIILSSPD 120
              +Q+GKGA ++GGYYSQL++EY+ VIIS    ++   +P S E G  QPL II++  +
Sbjct: 205 IITNQIGKGADQSGGYYSQLMKEYDGVIIS-SDLAKMSALPLSREAGTNQPLCIIIAQGE 264

Query: 121 -GLITVPRIT-DPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWD 180
              + +P ++ +  ++ ++  +  V V    +E  V  Q+++ +IL     +GL SV+ D
Sbjct: 265 SSRLHIPSLSQEHASRAIVLADSPVTVEPAGVEVAVFRQIDLESILQLLAQRGLCSVLVD 324

Query: 181 VRAKLGVHEELIKEGIEEKLLQKVVVEVLPQW--SESQSETWFKSMAENLKLKCLEPRMC 240
            R        L+ +  E+KL+QKVVVEVLP W  S+  S   F   +++  LK LE R  
Sbjct: 325 FREAGESFASLLNDFQEDKLVQKVVVEVLPFWLASDGLSNLAFGG-SQSFPLKNLELRDV 384

Query: 241 GPSVVLE 244
             SV+LE
Sbjct: 385 NGSVLLE 389

BLAST of Cucsat.G5815.T18 vs. ExPASy Swiss-Prot
Match: Q55158 (Riboflavin biosynthesis protein RibD OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=ribD PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-16
Identity = 72/253 (28.46%), Postives = 119/253 (47.04%), Query Frame = 0

Query: 1   MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 60
           MVDPNP+VA KG+ RLR AGI+V V +EE++C++LNEA+  +I   +P    +Y ++L+G
Sbjct: 101 MVDPNPLVAGKGISRLRQAGIEVKVGVEEEACQRLNEAFCFRIKHQRPFGIFKYAMTLDG 160

Query: 61  CFLDQVGKG----AAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWIIL 120
                        ++ A  +  QL  +  AVII   +   +  + +++  G   PL ++L
Sbjct: 161 KIATAQAHSSWVTSSSARHWVHQLRSQCQAVIIGGNTVRRDNPLLTNHGVGEVNPLRVVL 220

Query: 121 SSPDGLITVPRITD-PTTKVVIFTNKEV------VVSEREIETVVLDQLNMNNILNYCQS 180
           S    L    ++ D    K ++ T K         + + E+ET+VL+QL    ++     
Sbjct: 221 SRSLDLPIEAQLWDQDVAKTLVITEKTCDRNTLSHLEKLEVETLVLEQLTPLAVMEELYQ 280

Query: 181 QGLNSVMWDVRAKLGVHEELIKEGIEEK----LLQKVVVEVLPQWSESQSETWFKSMAEN 239
           +    V+W+    L    E I  G  +K    L  K++  V         E  F+ M + 
Sbjct: 281 RNCLQVLWECGGILAA--EAIAMGTVQKVHAFLAPKIIGGVAA--PTPVGELGFQQMTQA 340

BLAST of Cucsat.G5815.T18 vs. ExPASy Swiss-Prot
Match: O66534 (Riboflavin biosynthesis protein RibD OS=Aquifex aeolicus (strain VF5) OX=224324 GN=ribD PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.6e-10
Identity = 64/260 (24.62%), Postives = 122/260 (46.92%), Query Frame = 0

Query: 2   VDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGC 61
           +DPNP+++ KGV++LR+AGI+V V + E+  ++LNE +   I   +P +TL++  +L+G 
Sbjct: 104 LDPNPLMSGKGVEKLRNAGIEVDVGVCEEEARELNEDFFTYITQERPYITLKWAQTLDGK 163

Query: 62  FLDQVG-----------KGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQ 121
                G           K A       + +L   N VI   P  +  F +P+      KQ
Sbjct: 164 LATLTGSSKWITSKESRKVAHILRREATAVLVGVNTVIKDDPHLTVRF-VPTE-----KQ 223

Query: 122 PLWIILSSPDGLITVPR----ITDPTTKVVIFTNKE----VVVSEREIETVVLDQLNMNN 181
           P+ IIL   D  + VP     +       ++ T KE      + E+ ++ ++L   N+ N
Sbjct: 224 PVRIIL---DPELEVPLSAKVLNTEEAPTIVITKKENEKAEKLKEKGVQVLILKGFNLKN 283

Query: 182 ILNYCQSQGLNSVMWDVRAKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSM 241
           IL   +   +  +M  V          +KEG  ++++  +  +++ +   S  +   +S+
Sbjct: 284 ILKKLKELEIMHLM--VEGGPRTLTSFLKEGFFDRIVVFIAPKIMGE-GLSIGDLGIRSI 343

Query: 242 AENLKLKCLEPRMCGPSVVL 243
            E+LK++  +    G  +V+
Sbjct: 344 EESLKVRKKKVENLGEDLVI 351

BLAST of Cucsat.G5815.T18 vs. ExPASy Swiss-Prot
Match: P70814 (Riboflavin biosynthesis protein RibD OS=Bacillus amyloliquefaciens OX=1390 GN=ribD PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.4e-10
Identity = 57/213 (26.76%), Postives = 101/213 (47.42%), Query Frame = 0

Query: 3   DPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGCF 62
           DPNP+VA KG+  L +AGI+V   +     ++LN+ ++H + TG P +TL+   SL+G  
Sbjct: 101 DPNPLVAGKGITMLEEAGIEVKTGLLRQQAEELNKMFLHFMRTGLPYVTLKAAASLDGKT 160

Query: 63  LDQVGKG---AAEAGGYYSQLLQEYNAVII--SPPSSSEEFEIPSSNEHGAKQPLWIILS 122
             + G      +EA    +Q  ++ +  I+  +    ++   +        KQP+ +IL 
Sbjct: 161 ATETGDSKWITSEAARLDAQQYRKSHQRILVGAGTVKADNPSLTCRLPDAVKQPVRVIL- 220

Query: 123 SPDGLITVPR----ITDPTTKVVIFT--NKEVVVSER------EIETVVLDQLNMNNILN 182
             D  +TVP     +TD      IFT    +V   +R      ++ T+  D++++  +L+
Sbjct: 221 --DTKLTVPETANVLTDGAAPTWIFTAAGSDVRKKDRLTALGIKVFTLETDRIHIPEVLS 280

Query: 183 YCQSQGLNSVMWDVRAKLGVHEELIKEGIEEKL 199
                G+ SV   V     VH   +K G  ++L
Sbjct: 281 ILAENGIMSVY--VEGGASVHGSFVKAGCFDEL 308

BLAST of Cucsat.G5815.T18 vs. NCBI nr
Match: XP_004138506.1 (riboflavin biosynthesis protein PYRD, chloroplastic [Cucumis sativus] >KGN45651.1 hypothetical protein Csa_005405 [Cucumis sativus])

HSP 1 Score: 488 bits (1257), Expect = 3.34e-171
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0

Query: 1   MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 60
           MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG
Sbjct: 180 MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 239

Query: 61  CFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWIILSSPD 120
           CFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWIILSSPD
Sbjct: 240 CFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWIILSSPD 299

Query: 121 GLITVPRITDPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWDVR 180
           GLITVPRITDPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWDVR
Sbjct: 300 GLITVPRITDPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWDVR 359

Query: 181 AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSMAENLKLKCLEPRMCGPSV 240
           AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSMAENLKLKCLEPRMCGPSV
Sbjct: 360 AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSMAENLKLKCLEPRMCGPSV 419

Query: 241 VLEANL 246
           VLEANL
Sbjct: 420 VLEANL 425

BLAST of Cucsat.G5815.T18 vs. NCBI nr
Match: XP_008458260.1 (PREDICTED: riboflavin biosynthesis protein PYRD, chloroplastic [Cucumis melo] >XP_008458261.1 PREDICTED: riboflavin biosynthesis protein PYRD, chloroplastic [Cucumis melo] >TYK03007.1 riboflavin biosynthesis protein PYRD [Cucumis melo var. makuwa])

HSP 1 Score: 465 bits (1196), Expect = 6.32e-162
Identity = 236/246 (95.93%), Postives = 238/246 (96.75%), Query Frame = 0

Query: 1   MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 60
           MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG
Sbjct: 180 MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 239

Query: 61  CFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWIILSSPD 120
           CFLDQVGKGAAEAGGYYSQLLQEYNAVI+SPPSSSEEFEIPSSNEHGAKQPLWIILSSPD
Sbjct: 240 CFLDQVGKGAAEAGGYYSQLLQEYNAVIVSPPSSSEEFEIPSSNEHGAKQPLWIILSSPD 299

Query: 121 GLITVPRITDPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWDVR 180
           G I VPRIT+PTTKVVI TNKE VVSER IETVVLDQLNMNNILNYCQSQGLNSVMWDVR
Sbjct: 300 GSIPVPRITNPTTKVVILTNKEEVVSERGIETVVLDQLNMNNILNYCQSQGLNSVMWDVR 359

Query: 181 AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSMAENLKLKCLEPRMCGPSV 240
           AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSMAENLKLK LEPRMCG SV
Sbjct: 360 AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSMAENLKLKGLEPRMCGQSV 419

Query: 241 VLEANL 246
           VLE NL
Sbjct: 420 VLEGNL 425

BLAST of Cucsat.G5815.T18 vs. NCBI nr
Match: XP_038876336.1 (riboflavin biosynthesis protein PYRD, chloroplastic [Benincasa hispida])

HSP 1 Score: 423 bits (1087), Expect = 2.57e-145
Identity = 214/249 (85.94%), Postives = 229/249 (91.97%), Query Frame = 0

Query: 1   MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 60
           MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG
Sbjct: 180 MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 239

Query: 61  CFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWIILSSPD 120
           CF D +GKG A+AGGYYSQLLQEYNAV+ISPPSSSEEFEIP+S EHGAKQPLWIIL++PD
Sbjct: 240 CFQDLIGKGVADAGGYYSQLLQEYNAVLISPPSSSEEFEIPASKEHGAKQPLWIILTNPD 299

Query: 121 GLITVPRITDPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWDVR 180
           G ITVPRI D TTKVVI T+KEVVV E  IETVVLDQLN+ NIL+YCQSQGLNSV+WDVR
Sbjct: 300 GSITVPRIADATTKVVILTDKEVVVGESGIETVVLDQLNLGNILDYCQSQGLNSVLWDVR 359

Query: 181 AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQS---ETWFKSMAENLKLKCLEPRMCG 240
           A LGVHEELIKEGI++KLLQKVVVEVLPQWSESQS   ETWFKSMAENLKLK L+P+M G
Sbjct: 360 ANLGVHEELIKEGIDQKLLQKVVVEVLPQWSESQSGSSETWFKSMAENLKLKNLQPKMSG 419

Query: 241 PSVVLEANL 246
            SV+LE NL
Sbjct: 420 ESVLLEGNL 428

BLAST of Cucsat.G5815.T18 vs. NCBI nr
Match: XP_023514246.1 (riboflavin biosynthesis protein PYRD, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392 bits (1007), Expect = 4.25e-133
Identity = 193/248 (77.82%), Postives = 222/248 (89.52%), Query Frame = 0

Query: 1   MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 60
           MVDPNPIVASKGVQRLRDAGIDVTV +EEDSCK LNEAYIHQILTGKPLLTLRY+LS+NG
Sbjct: 185 MVDPNPIVASKGVQRLRDAGIDVTVRMEEDSCKMLNEAYIHQILTGKPLLTLRYSLSVNG 244

Query: 61  CFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWIILSSPD 120
           CF+DQVG+GAA+AGGYYSQLLQEYNAV+ISP SSS EFEIP+S E GAKQPLWIIL SPD
Sbjct: 245 CFIDQVGEGAADAGGYYSQLLQEYNAVLISPTSSSGEFEIPASKELGAKQPLWIILPSPD 304

Query: 121 GLITVPRITDPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWDVR 180
           G I +PRITD TT+VVI T+KE  V+E+ IETVV+DQL++ NIL+YC++QGLNSV+WDVR
Sbjct: 305 GSINIPRITDATTEVVILTDKEATVAEKGIETVVVDQLSLGNILDYCKNQGLNSVLWDVR 364

Query: 181 AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQS---ETWFKSMAENLKLKCLEPRMCG 240
            +LGVHEEL+KEGIE+KLLQK VVE+LPQW ES+S   E WFKSM E+LKLK L+PR+CG
Sbjct: 365 GELGVHEELLKEGIEQKLLQKYVVEMLPQWKESRSGRWEAWFKSMGESLKLKSLQPRICG 424

Query: 241 PSVVLEAN 245
            SV+LE N
Sbjct: 425 ESVILEGN 432

BLAST of Cucsat.G5815.T18 vs. NCBI nr
Match: XP_023514245.1 (riboflavin biosynthesis protein PYRD, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392 bits (1007), Expect = 4.54e-133
Identity = 193/248 (77.82%), Postives = 222/248 (89.52%), Query Frame = 0

Query: 1   MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 60
           MVDPNPIVASKGVQRLRDAGIDVTV +EEDSCK LNEAYIHQILTGKPLLTLRY+LS+NG
Sbjct: 187 MVDPNPIVASKGVQRLRDAGIDVTVRMEEDSCKMLNEAYIHQILTGKPLLTLRYSLSVNG 246

Query: 61  CFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWIILSSPD 120
           CF+DQVG+GAA+AGGYYSQLLQEYNAV+ISP SSS EFEIP+S E GAKQPLWIIL SPD
Sbjct: 247 CFIDQVGEGAADAGGYYSQLLQEYNAVLISPTSSSGEFEIPASKELGAKQPLWIILPSPD 306

Query: 121 GLITVPRITDPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWDVR 180
           G I +PRITD TT+VVI T+KE  V+E+ IETVV+DQL++ NIL+YC++QGLNSV+WDVR
Sbjct: 307 GSINIPRITDATTEVVILTDKEATVAEKGIETVVVDQLSLGNILDYCKNQGLNSVLWDVR 366

Query: 181 AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQS---ETWFKSMAENLKLKCLEPRMCG 240
            +LGVHEEL+KEGIE+KLLQK VVE+LPQW ES+S   E WFKSM E+LKLK L+PR+CG
Sbjct: 367 GELGVHEELLKEGIEQKLLQKYVVEMLPQWKESRSGRWEAWFKSMGESLKLKSLQPRICG 426

Query: 241 PSVVLEAN 245
            SV+LE N
Sbjct: 427 ESVILEGN 434

BLAST of Cucsat.G5815.T18 vs. ExPASy TrEMBL
Match: A0A0A0KCZ2 (Diaminohydroxyphosphoribosylaminopyrimidine deaminase OS=Cucumis sativus OX=3659 GN=Csa_6G003430 PE=4 SV=1)

HSP 1 Score: 488 bits (1257), Expect = 1.62e-171
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0

Query: 1   MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 60
           MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG
Sbjct: 180 MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 239

Query: 61  CFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWIILSSPD 120
           CFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWIILSSPD
Sbjct: 240 CFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWIILSSPD 299

Query: 121 GLITVPRITDPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWDVR 180
           GLITVPRITDPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWDVR
Sbjct: 300 GLITVPRITDPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWDVR 359

Query: 181 AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSMAENLKLKCLEPRMCGPSV 240
           AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSMAENLKLKCLEPRMCGPSV
Sbjct: 360 AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSMAENLKLKCLEPRMCGPSV 419

Query: 241 VLEANL 246
           VLEANL
Sbjct: 420 VLEANL 425

BLAST of Cucsat.G5815.T18 vs. ExPASy TrEMBL
Match: A0A1S3C822 (Diaminohydroxyphosphoribosylaminopyrimidine deaminase OS=Cucumis melo OX=3656 GN=LOC103497730 PE=4 SV=1)

HSP 1 Score: 465 bits (1196), Expect = 3.06e-162
Identity = 236/246 (95.93%), Postives = 238/246 (96.75%), Query Frame = 0

Query: 1   MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 60
           MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG
Sbjct: 180 MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 239

Query: 61  CFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWIILSSPD 120
           CFLDQVGKGAAEAGGYYSQLLQEYNAVI+SPPSSSEEFEIPSSNEHGAKQPLWIILSSPD
Sbjct: 240 CFLDQVGKGAAEAGGYYSQLLQEYNAVIVSPPSSSEEFEIPSSNEHGAKQPLWIILSSPD 299

Query: 121 GLITVPRITDPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWDVR 180
           G I VPRIT+PTTKVVI TNKE VVSER IETVVLDQLNMNNILNYCQSQGLNSVMWDVR
Sbjct: 300 GSIPVPRITNPTTKVVILTNKEEVVSERGIETVVLDQLNMNNILNYCQSQGLNSVMWDVR 359

Query: 181 AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSMAENLKLKCLEPRMCGPSV 240
           AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSMAENLKLK LEPRMCG SV
Sbjct: 360 AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSMAENLKLKGLEPRMCGQSV 419

Query: 241 VLEANL 246
           VLE NL
Sbjct: 420 VLEGNL 425

BLAST of Cucsat.G5815.T18 vs. ExPASy TrEMBL
Match: A0A5D3BU46 (Diaminohydroxyphosphoribosylaminopyrimidine deaminase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001020 PE=4 SV=1)

HSP 1 Score: 465 bits (1196), Expect = 3.06e-162
Identity = 236/246 (95.93%), Postives = 238/246 (96.75%), Query Frame = 0

Query: 1   MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 60
           MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG
Sbjct: 180 MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 239

Query: 61  CFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWIILSSPD 120
           CFLDQVGKGAAEAGGYYSQLLQEYNAVI+SPPSSSEEFEIPSSNEHGAKQPLWIILSSPD
Sbjct: 240 CFLDQVGKGAAEAGGYYSQLLQEYNAVIVSPPSSSEEFEIPSSNEHGAKQPLWIILSSPD 299

Query: 121 GLITVPRITDPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWDVR 180
           G I VPRIT+PTTKVVI TNKE VVSER IETVVLDQLNMNNILNYCQSQGLNSVMWDVR
Sbjct: 300 GSIPVPRITNPTTKVVILTNKEEVVSERGIETVVLDQLNMNNILNYCQSQGLNSVMWDVR 359

Query: 181 AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSMAENLKLKCLEPRMCGPSV 240
           AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSMAENLKLK LEPRMCG SV
Sbjct: 360 AKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSMAENLKLKGLEPRMCGQSV 419

Query: 241 VLEANL 246
           VLE NL
Sbjct: 420 VLEGNL 425

BLAST of Cucsat.G5815.T18 vs. ExPASy TrEMBL
Match: A0A6J1KE95 (Diaminohydroxyphosphoribosylaminopyrimidine deaminase OS=Cucurbita maxima OX=3661 GN=LOC111494203 PE=4 SV=1)

HSP 1 Score: 389 bits (1000), Expect = 1.82e-132
Identity = 194/249 (77.91%), Postives = 223/249 (89.56%), Query Frame = 0

Query: 1   MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 60
           MVDPNPIVASKGVQRLRDAGIDVTV +EEDSCKKLNEAYIHQILTGKPLLTLRY+LS+NG
Sbjct: 176 MVDPNPIVASKGVQRLRDAGIDVTVRMEEDSCKKLNEAYIHQILTGKPLLTLRYSLSVNG 235

Query: 61  CFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSE-EFEIPSSNEHGAKQPLWIILSSP 120
           CF+DQVG+GAA+AGGYYSQLLQEYNAV+ISP SSS  EFEIP+S E GAKQPLWIIL SP
Sbjct: 236 CFVDQVGEGAADAGGYYSQLLQEYNAVLISPTSSSSGEFEIPASKELGAKQPLWIILPSP 295

Query: 121 DGLITVPRITDPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWDV 180
           DG I +PRITD TT+VVI T+KE  V+E+ IETVV+DQL++ NIL+YC++QGLNSV+WDV
Sbjct: 296 DGSINIPRITDATTEVVILTDKEATVAEKGIETVVVDQLSLGNILDYCKNQGLNSVLWDV 355

Query: 181 RAKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQS---ETWFKSMAENLKLKCLEPRMC 240
           R +LGV+EEL+KEGIE+KLLQK VVE+LPQW ESQS   E WFKSM E+LKLK L+PR+C
Sbjct: 356 RGELGVYEELLKEGIEQKLLQKYVVEMLPQWKESQSGRWEAWFKSMGESLKLKSLQPRIC 415

Query: 241 GPSVVLEAN 245
           G SV+LE N
Sbjct: 416 GESVILEGN 424

BLAST of Cucsat.G5815.T18 vs. ExPASy TrEMBL
Match: A0A6J1KIA2 (Diaminohydroxyphosphoribosylaminopyrimidine deaminase OS=Cucurbita maxima OX=3661 GN=LOC111494203 PE=4 SV=1)

HSP 1 Score: 389 bits (1000), Expect = 2.45e-132
Identity = 194/249 (77.91%), Postives = 223/249 (89.56%), Query Frame = 0

Query: 1   MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 60
           MVDPNPIVASKGVQRLRDAGIDVTV +EEDSCKKLNEAYIHQILTGKPLLTLRY+LS+NG
Sbjct: 185 MVDPNPIVASKGVQRLRDAGIDVTVRMEEDSCKKLNEAYIHQILTGKPLLTLRYSLSVNG 244

Query: 61  CFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSE-EFEIPSSNEHGAKQPLWIILSSP 120
           CF+DQVG+GAA+AGGYYSQLLQEYNAV+ISP SSS  EFEIP+S E GAKQPLWIIL SP
Sbjct: 245 CFVDQVGEGAADAGGYYSQLLQEYNAVLISPTSSSSGEFEIPASKELGAKQPLWIILPSP 304

Query: 121 DGLITVPRITDPTTKVVIFTNKEVVVSEREIETVVLDQLNMNNILNYCQSQGLNSVMWDV 180
           DG I +PRITD TT+VVI T+KE  V+E+ IETVV+DQL++ NIL+YC++QGLNSV+WDV
Sbjct: 305 DGSINIPRITDATTEVVILTDKEATVAEKGIETVVVDQLSLGNILDYCKNQGLNSVLWDV 364

Query: 181 RAKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQS---ETWFKSMAENLKLKCLEPRMC 240
           R +LGV+EEL+KEGIE+KLLQK VVE+LPQW ESQS   E WFKSM E+LKLK L+PR+C
Sbjct: 365 RGELGVYEELLKEGIEQKLLQKYVVEMLPQWKESQSGRWEAWFKSMGESLKLKSLQPRIC 424

Query: 241 GPSVVLEAN 245
           G SV+LE N
Sbjct: 425 GESVILEGN 433

BLAST of Cucsat.G5815.T18 vs. TAIR 10
Match: AT4G20960.1 (Cytidine/deoxycytidylate deaminase family protein )

HSP 1 Score: 225.3 bits (573), Expect = 5.3e-59
Identity = 125/255 (49.02%), Postives = 184/255 (72.16%), Query Frame = 0

Query: 1   MVDPNPIVASKGVQRLRDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNG 60
           MVDPNPIV S G+ RL+DAGIDVTVS+EE+ CKK+NE +IH++LTGKP L LRY++S+NG
Sbjct: 171 MVDPNPIVFSSGISRLKDAGIDVTVSVEEELCKKMNEGFIHRMLTGKPFLALRYSMSVNG 230

Query: 61  CFLDQVGKGAAEAGGYYSQLLQEYNAVIISPPSSSEEFEIPSSNE--HGAKQPLWIILSS 120
           C LD++G+GA+++GGYYS+LLQEY+A+I+S  S S+E    SS E  + + QP+ II++S
Sbjct: 231 CLLDKIGQGASDSGGYYSKLLQEYDAIILS-SSLSDELSSISSQEAINVSIQPIQIIVAS 290

Query: 121 ----PDGLITVPRITDPTTKVVIFTNKEVV----VSEREIETVVLDQLNMNNILNYCQSQ 180
                  L +   + +   KVV+FT KE V    +S   +ETVVL+++N+++IL+YC ++
Sbjct: 291 NAQQSHILASSHTVEESGPKVVVFTAKESVAESGISSSGVETVVLEKINLDSILDYCYNR 350

Query: 181 GLNSVMWDVRAKLGVHEELIKEGIEEKLLQKVVVEVLPQWSESQSETWFKSM--AENLKL 240
           GL SV+ D+R  +   E L+++G E+KLLQKV++EVLP+WS ++ E    SM   E+  +
Sbjct: 351 GLCSVLLDLRGNVKDLEVLLRDGFEQKLLQKVIIEVLPEWS-TKDERQIASMKWLESKHV 410

Query: 241 KCLEPRMCGPSVVLE 244
           K L+ +  G SV+LE
Sbjct: 411 KDLQSKQLGGSVLLE 423

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8GWP57.4e-5849.02Riboflavin biosynthesis protein PYRD, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
B6TRH42.7e-4443.32Riboflavin biosynthesis protein PYRD, chloroplastic OS=Zea mays OX=4577 GN=PYRD ... [more]
Q551581.4e-1628.46Riboflavin biosynthesis protein RibD OS=Synechocystis sp. (strain PCC 6803 / Kaz... [more]
O665342.6e-1024.62Riboflavin biosynthesis protein RibD OS=Aquifex aeolicus (strain VF5) OX=224324 ... [more]
P708143.4e-1026.76Riboflavin biosynthesis protein RibD OS=Bacillus amyloliquefaciens OX=1390 GN=ri... [more]
Match NameE-valueIdentityDescription
XP_004138506.13.34e-171100.00riboflavin biosynthesis protein PYRD, chloroplastic [Cucumis sativus] >KGN45651.... [more]
XP_008458260.16.32e-16295.93PREDICTED: riboflavin biosynthesis protein PYRD, chloroplastic [Cucumis melo] >X... [more]
XP_038876336.12.57e-14585.94riboflavin biosynthesis protein PYRD, chloroplastic [Benincasa hispida][more]
XP_023514246.14.25e-13377.82riboflavin biosynthesis protein PYRD, chloroplastic isoform X2 [Cucurbita pepo s... [more]
XP_023514245.14.54e-13377.82riboflavin biosynthesis protein PYRD, chloroplastic isoform X1 [Cucurbita pepo s... [more]
Match NameE-valueIdentityDescription
A0A0A0KCZ21.62e-171100.00Diaminohydroxyphosphoribosylaminopyrimidine deaminase OS=Cucumis sativus OX=3659... [more]
A0A1S3C8223.06e-16295.93Diaminohydroxyphosphoribosylaminopyrimidine deaminase OS=Cucumis melo OX=3656 GN... [more]
A0A5D3BU463.06e-16295.93Diaminohydroxyphosphoribosylaminopyrimidine deaminase OS=Cucumis melo var. makuw... [more]
A0A6J1KE951.82e-13277.91Diaminohydroxyphosphoribosylaminopyrimidine deaminase OS=Cucurbita maxima OX=366... [more]
A0A6J1KIA22.45e-13277.91Diaminohydroxyphosphoribosylaminopyrimidine deaminase OS=Cucurbita maxima OX=366... [more]
Match NameE-valueIdentityDescription
AT4G20960.15.3e-5949.02Cytidine/deoxycytidylate deaminase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024072Dihydrofolate reductase-like domain superfamilyGENE3D3.40.430.10Dihydrofolate Reductase, subunit Acoord: 37..245
e-value: 1.8E-12
score: 49.0
IPR024072Dihydrofolate reductase-like domain superfamilySUPERFAMILY53597Dihydrofolate reductase-likecoord: 48..243
NoneNo IPR availablePANTHERPTHR11079CYTOSINE DEAMINASE FAMILY MEMBERcoord: 1..93
NoneNo IPR availablePANTHERPTHR11079:SF162RIBOFLAVIN BIOSYNTHESIS PROTEIN PYRD, CHLOROPLASTICcoord: 1..93

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G5815Cucsat.G5815gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G5815.T18.E1Cucsat.G5815.T18.E1exon
Cucsat.G5815.T18.E2Cucsat.G5815.T18.E2exon
Cucsat.G5815.T18.E3Cucsat.G5815.T18.E3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G5815.T18.C2Cucsat.G5815.T18.C2CDS
Cucsat.G5815.T18.C1Cucsat.G5815.T18.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G5815.T18Cucsat.G5815.T18-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009231 riboflavin biosynthetic process
molecular_function GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
molecular_function GO:0008270 zinc ion binding