Cucsat.G5715.T2 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGTTTCAGCACAGACCCAGAGGGTCTATTCGCATTCATTTTCCTCCGCAGCACTGGACTTTCTTCGACTCGTCACACTCTGACACCGCGACGTCCACATCGGAGAAGCTGAGTGCTTCTGCCTCTCATTTGCTAACATCGGCACTAACTGCGTCGACTTCGGAAAAGTGACGCTCGTCGGACTCTCCCCGTTGAAAAGCTTTCTGGTTCAACCATCGGTCCCCATTGTTGTTTTGTTTGCTGATATTTCAATTTTCAGGTAATTTCATTCTATTACAGAGGTATTTAAATGGACTTATTTTATTGACCCAATAATGAATTTTGTTGTTCTTGTGGTGGGGAAATCTTTGTGGGCTTTAAATTGAGTTTTTTGTTGTTAGGCCGTAGATTGTTTGTTATAGGAAGGAAAATCAAGAATTTGGTACAAATGTTTATTTGTTTATGTCTATAATTATACTTGAGGAAGTCAGCTGCAATTTGAAAAAAAAAGAGAGTAAAATATGGGAGGAGAGAGACAGGGGAAAGGATAGAACGTTTTTTTTTCTTCTTTTTTGTGCGGATGACCGTCATTTTGGATGGTTAATGCCGTTTTCCGTAATGAGAGCTCAGAGTGAGTGTTGGAGTGAGAAGTAGTGCGAGCACCAGGGAGGAAGAACCCTAGTCTGTGAGAGCATTGTTGCATTAGATTAGTTGAAAAACGAGCTGCAGCGCAATGGAGGGATGGGGAGGGAAGAAGGAAGAGTTCTAACTTGTAGGAGCACTATTGTACAAACAACTCAAGAACGAAAACTTATAAAAAACAGTATGAGTTTTCACTGCCCTTCTTCTATTTGTTGAACATGAGGTTTCATCTAAGAAATAATTGGCAATGAGAGGAGTAGCTTATTTATTTCATAAGGAGTTGAGGTCTCTTGAATTTTCTAATGTAGGATTCTCAATGTGCCTCCAAGATGGTTGTTCTTTTGGGTTCACTATTTTTTATTGGAACACAATTTCTTTTTATTAGACCAAATACTTGTTTGGGCTTTATGAACTCTAATACTATGATAACATGGGGTTTCAGCTTTAACCTAATTGGCAATAAGAAGAAGAGTAGCTCAACTATCTTATAAGGAGTGTGAAGAAGCCCCTTGAATTTTCCACGTGGGATCCTCAGCATCTCCTTCCTTTCTCAATCTGATAAAAAATCACTCCCCTTTTCTCTTCATATTGATACTGACGTATTCCCATTCTGCTTCTCAAGGTATGTTTATTCTCCAAGCTTGTGATTTTCAGGTTTCTTTTGAACACATTTTCCTTTTATTCTTTCTCTTCTCTATGTTTATTGGGTGAATTTAGTGTTGCAGATGGAGTAATGTGATTCTTAGTAACCTAACTGCTTCTGTTTCTTGGGTTTTCAGTCAAATGAGAAAGCCTTTTTTTTGAGTTGCAGCTTCTTTGACGATAATTTGTTGGGTTCTAAGGTCCAGAAATGGCTCCTAGACTGCGAAGGAAAAAGGCATTTTCTTTTATTTATTTGACCTTTTTGTTGATTCCTTCTTCTCTCTAAAAGAGCTTTCTGCAAATTGCTCTCTTGTAGATGGTAATAGTATATATATTTTAATTTTCTTCTGACTGGCTCTCTTCAATTTAAATTTTAGAGGCCTAACTTACGAATTGATGCTGCGCTGGATGCTATGAAGCAGTTTGGATTTCCTCCAAAGTTGGTGCGTGACACGGTCAAGGAGCTCCTCGATGTAGGTTTTTCAGATTTTCTCTGTTATTGTTATTGTTTTGTTTGTGTGTGTGCTTCTTCTGTGGCTGTTAGTGGGTATGTTTTTCAAGTCATTAAACAAGAAAGAATGATTATTACTTTATCCTTTTTTTATATTCAGTTTGGTTTTGTCATTATTTATGGGTGTTGCCTGAATTTTTTTTTGTTTCATTACGTCAATTTGATTTTCATGCAATCACTGCAACATATGCATCACGTGAAGAATTTTCTTTAGGTATATGGAGGAGACGACGGGTGGGTATTCATTGAAGAAGGCTCTTATGCTCTCTTGATCGATAGCCTTCTCGAGAAGCAGAATGAGGGTGCAATCGAAGTGGTTAGTTATTCCCCAAGCTTGTGATTTTCAGGCTACTTTTATTGCATTTGGTTCTTGACATGCACACGTTCTTTACCTTTCCATACAGTTTATGGGTGATTAACGATCCCATCAGAGAACCATTGATGTTTGTTGTGTTGGGTATAAGAAACTGCTTGTTCTGTAGTTTTTAGTAAACTATTAGTATTAGGCATCCTTCTTAGATGGAAAGGTACTTACCGGACTGTGTTTTTATATAAATAAGAGTCGAAATATTTAGCTCCAAAGAAACTCGAATTCAAAATTTCAAAGGAGCTGTTTAGCCCATGGAGTTGGACTTGGGGAGTGAAGTTCAGCCTCAACTTCAGAAGTTTGTGGCTCCATAATTCACAGCCATCAGCCTTTTGCTTTATTGACTTCTTATACAGTGGGCACACGACTTCCCAACTCCCCAGAGTGCACAACTCCACTCCTTTTGCTAGTTCTTGTCAAATTGTTGGCAGTTAGCGCGACATTTGCTCATGCATATAGTTTTTATTATTCTTTTACTTGGGAGTACTTTAAGCTGAGCTTCTAATCACATAATATTTCTACGGTTCGTGCCAGCTGGGAATTGTGTTTGTAGTTCAATTGGCCACTTTAAATTCAAAATGTTAATGAAAATGACTGTCGTTATGTTGAACTGTTTAGAGAATTGGTTTTTCTCCCGTGAGCCCGTTGATCCTATTTTCCAAGTCATGAGTGATCTTTTTAAACTTCACCCCTCTGGTAGCAGCATGATTGACTTGACTAATTATCAGAATAATGCACACCTTGTATTTTTTTCCAATGTTTTATTTCTTCAGTTTTTTCACGTTTGAATGCCCATTTTCTGAAGGTTCATGATAATGAAAGAGTAGATCATCAGTACACCTCAGTAGCTGGCTGTTCATTGAGTGCTACCGATGTAACTCCCTCAAATGAAGCTATAATGACCACAGCCGCATTGCCTGCAAATGATTTAGGTAACTAGTTTTCCATACCTTACCAAAGATTACCATCGTTCTATAACTACAAAATTCCTTCACATGTAATTTAGCGAGTTTAGTTGTAAACTTGACGATTGGTGCTGCCTTAAACTTGTAACCTTACTGTGTTTCAGATACATTATTTCCAGGAGATGAAAGTTATTGGAACAATGAAGGTTCTGTTGACGATGATCATTTTAGGAGTACTTTTAATCAGTCTTTACCTGCATATACCCCCAAAATACGAAGGCGAAAAGCTTATCATGGCTGGATCGGTAAGGACGACAAGGAGGAGGATCTCGTGTACTTAACCCCAGATCATTTGCCTGAAGAGCTTGCCAAGTTACTCATAGCTGGTGCACTGAAAAAAAGAAAGAAGCGTTGGGATGTGGAACCTGCAGAAGCATGAGTCTCTTTTTTATTTGGGTGGTTGGATGTTGATTACTGGAGGGGAGTAGATAGGTGAAAGTGTAAATGGTAGTTTCACCCTCTTTTGTCTGTTAGGGTAACGTTTGAAGTAGCTTCCAAGCCTTTTTTGTTGAATTGCCCACAAAAGAAGTGTTTTGTTATTGGTGGTGATGGATTATTATGAGCATGATGTTAAATGTAGCTCACTCTTATCTCAATTTGAAAAGTGTCAACAATTTCCATCCATTTGATCTCGTGTGAGAAGGTAAAAT ATGAAGCAGTTTGGATTTCCTCCAAAGTTGGTGCGTGACACGGTCAAGGAGCTCCTCGATGTATATGGAGGAGACGACGGGTGGGTATTCATTGAAGAAGGCTCTTATGCTCTCTTGATCGATAGCCTTCTCGAGAAGCAGAATGAGGGTGCAATCGAAGTGGTTCATGATAATGAAAGAGTAGATCATCAGTACACCTCAGTAGCTGGCTGTTCATTGAGTGCTACCGATGTAACTCCCTCAAATGAAGCTATAATGACCACAGCCGCATTGCCTGCAAATGATTTAGATACATTATTTCCAGGAGATGAAAGTTATTGGAACAATGAAGGTTCTGTTGACGATGATCATTTTAGGAGTACTTTTAATCAGTCTTTACCTGCATATACCCCCAAAATACGAAGGCGAAAAGCTTATCATGGCTGGATCGGTAAGGACGACAAGGAGGAGGATCTCGTGTACTTAACCCCAGATCATTTGCCTGAAGAGCTTGCCAAGTTACTCATAGCTGGTGCACTGAAAAAAAGAAAGAAGCGTTGGGATGTGGAACCTGCAGAAGCATGA MKQFGFPPKLVRDTVKELLDVYGGDDGWVFIEEGSYALLIDSLLEKQNEGAIEVVHDNERVDHQYTSVAGCSLSATDVTPSNEAIMTTAALPANDLDTLFPGDESYWNNEGSVDDDHFRSTFNQSLPAYTPKIRRRKAYHGWIGKDDKEEDLVYLTPDHLPEELAKLLIAGALKKRKKRWDVEPAEA Homology
BLAST of Cucsat.G5715.T2 vs. NCBI nr
Match: XP_004138569.1 (uncharacterized protein LOC101218050 isoform X1 [Cucumis sativus] >XP_011656408.1 uncharacterized protein LOC101218050 isoform X1 [Cucumis sativus] >XP_031742522.1 uncharacterized protein LOC101218050 isoform X1 [Cucumis sativus] >KGN45780.1 hypothetical protein Csa_005093 [Cucumis sativus]) HSP 1 Score: 386 bits (992), Expect = 3.12e-135 Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of Cucsat.G5715.T2 vs. NCBI nr
Match: XP_031742523.1 (uncharacterized protein LOC101218050 isoform X2 [Cucumis sativus]) HSP 1 Score: 369 bits (948), Expect = 1.34e-128 Identity = 180/187 (96.26%), Postives = 182/187 (97.33%), Query Frame = 0
BLAST of Cucsat.G5715.T2 vs. NCBI nr
Match: TYK24425.1 (ubiquitin-binding WIYLD domain protein [Cucumis melo var. makuwa]) HSP 1 Score: 363 bits (932), Expect = 3.30e-126 Identity = 174/187 (93.05%), Postives = 180/187 (96.26%), Query Frame = 0
BLAST of Cucsat.G5715.T2 vs. NCBI nr
Match: XP_008441447.1 (PREDICTED: uncharacterized protein LOC103485563 isoform X1 [Cucumis melo]) HSP 1 Score: 363 bits (932), Expect = 4.39e-126 Identity = 174/187 (93.05%), Postives = 180/187 (96.26%), Query Frame = 0
BLAST of Cucsat.G5715.T2 vs. NCBI nr
Match: XP_008441449.1 (PREDICTED: uncharacterized protein LOC103485563 isoform X2 [Cucumis melo]) HSP 1 Score: 360 bits (923), Expect = 6.08e-125 Identity = 172/186 (92.47%), Postives = 179/186 (96.24%), Query Frame = 0
BLAST of Cucsat.G5715.T2 vs. ExPASy TrEMBL
Match: A0A0A0K7Q2 (WIYLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G011060 PE=4 SV=1) HSP 1 Score: 386 bits (992), Expect = 1.51e-135 Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of Cucsat.G5715.T2 vs. ExPASy TrEMBL
Match: A0A5D3DLD6 (Ubiquitin-binding WIYLD domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G002240 PE=4 SV=1) HSP 1 Score: 363 bits (932), Expect = 1.60e-126 Identity = 174/187 (93.05%), Postives = 180/187 (96.26%), Query Frame = 0
BLAST of Cucsat.G5715.T2 vs. ExPASy TrEMBL
Match: A0A1S3B3F8 (uncharacterized protein LOC103485563 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485563 PE=4 SV=1) HSP 1 Score: 363 bits (932), Expect = 2.12e-126 Identity = 174/187 (93.05%), Postives = 180/187 (96.26%), Query Frame = 0
BLAST of Cucsat.G5715.T2 vs. ExPASy TrEMBL
Match: A0A1S3B448 (uncharacterized protein LOC103485563 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485563 PE=4 SV=1) HSP 1 Score: 360 bits (923), Expect = 2.94e-125 Identity = 172/186 (92.47%), Postives = 179/186 (96.24%), Query Frame = 0
BLAST of Cucsat.G5715.T2 vs. ExPASy TrEMBL
Match: A0A1S3B481 (uncharacterized protein LOC103485563 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485563 PE=4 SV=1) HSP 1 Score: 357 bits (917), Expect = 1.82e-124 Identity = 171/184 (92.93%), Postives = 177/184 (96.20%), Query Frame = 0
BLAST of Cucsat.G5715.T2 vs. TAIR 10
Match: AT2G40020.1 (Nucleolar histone methyltransferase-related protein ) HSP 1 Score: 51.2 bits (121), Expect = 1.0e-06 Identity = 53/224 (23.66%), Postives = 96/224 (42.86%), Query Frame = 0
BLAST of Cucsat.G5715.T2 vs. TAIR 10
Match: AT2G40020.3 (Nucleolar histone methyltransferase-related protein ) HSP 1 Score: 51.2 bits (121), Expect = 1.0e-06 Identity = 53/224 (23.66%), Postives = 96/224 (42.86%), Query Frame = 0
BLAST of Cucsat.G5715.T2 vs. TAIR 10
Match: AT2G40020.2 (Nucleolar histone methyltransferase-related protein ) HSP 1 Score: 47.4 bits (111), Expect = 1.5e-05 Identity = 22/49 (44.90%), Postives = 32/49 (65.31%), Query Frame = 0
BLAST of Cucsat.G5715.T2 vs. TAIR 10
Match: AT1G45248.2 (Nucleolar histone methyltransferase-related protein ) HSP 1 Score: 42.0 bits (97), Expect = 6.3e-04 Identity = 20/50 (40.00%), Postives = 33/50 (66.00%), Query Frame = 0
BLAST of Cucsat.G5715.T2 vs. TAIR 10
Match: AT1G45248.3 (Nucleolar histone methyltransferase-related protein ) HSP 1 Score: 42.0 bits (97), Expect = 6.3e-04 Identity = 20/50 (40.00%), Postives = 33/50 (66.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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