Cucsat.G5670.T24 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAGTATCTAATCAGTTCTTAAACGTTCAATTTCGTGTTTGATAGTTCTTTGACATATTCTTCTAGGAGTGGTGCACATGCTAACTTTTTTAGTCCATATTTGTTCTTGAGCAACTTCAGTGAAGGGCGCCTGCAAGGGCAAAATCGACCACCTAGAACTGAAGTCATCATGTATTTTTCTTCTGTACATCTTGTCCCTTAATGCGGCTATTCACTCTTGTTTTCCCTTGGCTTATTTTCTAATGAAGTATGCACCAGTTTGCTTACAGATAATCAATTATGACCTTAGGCATATTCTTCCAGGAAAACCTTCAGATAAACCCAACATTATTCGGTCTAGTGCAACACAATCTTTCTTGGTGGTGTACAAATCATTCTAAATTCTGTTGCAACTACAGCCTTTTGTTGATTATTAACAATTAGAACTTCTTTTTTAGGTTTGTGGGTAGGGATAACCTCACCCTTAGGGCCATGGTAGTTATTGCTCAGCTGCAACTAAAAAGAAATCCTTGAATGTCGGAGATGGATGCTTGACATACTTAATTTTGTGGATTCTATTACATGTACAGTCTAAGATCAACGTCTAGCAGCTAGCCCAAAATTAGCTTTCAGTGCCTAATCTCAAACGTCACTTTTAGTTTATGATTCCTTCAAGCTTTTGTTGTTGTCTACGATAACTTGTTCACAGCTCTCCAATTGCCTTCTCTTCCCTTTTTTCTCTCAGTTTATTTTTATTATTTTTTGTGTGGCTCCGGTTAGGAGTGTTCATTGGTCATTCAACGTTAGTTTTGAACTCAAGCCAATTTTGGCCACCTATTTGTTGGTTTTGATCGGTATATCGTTTTGCAGGATTGGAAGATTTCCTCCAGTTGTAAAGACAGCAGTGCCTGTAGACAAGAGGTTTGAGCATTTAGTCCTTTCATGCAATGCTACTTCAGACCATGCTATTATCTGGATAGAGAGAGAGTCCCAGAAGGCTCTTGATGTAAGTGTCTCTCCTCACTTGCCTCTGCTTCAGTAGTTAAGTTCCATGAGATTATCTTACAATTTATGAAGGGTAACTGCTGAAAGTTCCTAGCCACATTCATATCATGAAATTCATTCATATGTCGGTTAATATTCACAAGTTCTTCGTGCCAAACATTTCTGCATAGGATTGATTCAACATTGAGTTAATGAGCTTGATGTTGGACAACCTGTCTACGTTGATGATTGATACAAGTTTTGGTGGAGAATTGCATAAATTGAAATGGGGTTGAAACATATTGTGTTTTTTCCTCTCCCCAGATCATGATGGAGAATGATAAAGCCTTAGAAATCCCAGTGCAGCAGAGGATGCAACGGCAAGCTTCGGTAGAACGAGGACATGGTGAAGAGTACAAGGCAGCCCTCGAGCGAGCTGCCGCATTGGAAATCCCTGATGAAAACTTACCACTCTCCTATGGAACATTCAGTGAATTGGAAGAAGGTGAGAATTCTAGCCAATCAATCAAAGACATATCGGTAGCATCATCAACCAAACAAAGGGATAGTTGGGATAAATTCATAAAACGGTTTTTCGATGAGGATCAGTCTGGTCGAATGGTGTTCAAAAAGTCGTAAGCCTTACTGAATTTGCATAAATTCTTATTTGGGAAGTAGGAACTGCAAGTACCATTCTTTCGACTGTATAAAGAAACATAGATTTTGTAGATAACTTCATTTGTTCCCCAGAATAGGACAGATAGAATATCCTCTCTTCATTTTTTATTTTTGGGTTACTTCTTGCTTTTGCTTCATTTGTGACAAGCAAAAGCCATAGTTTAGAAATGACCTTGTGG ATGATTGGAAGATTTCCTCCAGTTGTAAAGACAGCAGTGCCTGTAGACAAGAGGTTTGAGCATTTAGTCCTTTCATGCAATGCTACTTCAGACCATGCTATTATCTGGATAGAGAGAGAGTCCCAGAAGGCTCTTGATATCATGATGGAGAATGATAAAGCCTTAGAAATCCCAGTGCAGCAGAGGATGCAACGGCAAGCTTCGGTAGAACGAGGACATGGTGAAGAGTACAAGGCAGCCCTCGAGCGAGCTGCCGCATTGGAAATCCCTGATGAAAACTTACCACTCTCCTATGGAACATTCAGTGAATTGGAAGAAGGTGAGAATTCTAGCCAATCAATCAAAGACATATCGGTAGCATCATCAACCAAACAAAGGGATAGTTGGGATAAATTCATAAAACGGTTTTTCGATGAGGATCAGTCTGGTCGAATGGTGTTCAAAAAGTCGTAA MIGRFPPVVKTAVPVDKRFEHLVLSCNATSDHAIIWIERESQKALDIMMENDKALEIPVQQRMQRQASVERGHGEEYKAALERAAALEIPDENLPLSYGTFSELEEGENSSQSIKDISVASSTKQRDSWDKFIKRFFDEDQSGRMVFKKS Homology
BLAST of Cucsat.G5670.T24 vs. NCBI nr
Match: XP_031743495.1 (uncharacterized protein LOC101223172 isoform X2 [Cucumis sativus]) HSP 1 Score: 289 bits (740), Expect = 1.05e-94 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Cucsat.G5670.T24 vs. NCBI nr
Match: XP_004138505.1 (uncharacterized protein LOC101223172 isoform X1 [Cucumis sativus] >XP_011656337.1 uncharacterized protein LOC101223172 isoform X1 [Cucumis sativus] >KGN45652.1 hypothetical protein Csa_005130 [Cucumis sativus]) HSP 1 Score: 289 bits (740), Expect = 3.77e-94 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Cucsat.G5670.T24 vs. NCBI nr
Match: XP_008458247.1 (PREDICTED: uncharacterized protein LOC103497722 [Cucumis melo]) HSP 1 Score: 286 bits (731), Expect = 8.62e-93 Identity = 147/149 (98.66%), Postives = 147/149 (98.66%), Query Frame = 0
BLAST of Cucsat.G5670.T24 vs. NCBI nr
Match: TYK03008.1 (Lipase_3 domain-containing protein/Lipase3_N domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 286 bits (731), Expect = 5.39e-92 Identity = 147/149 (98.66%), Postives = 147/149 (98.66%), Query Frame = 0
BLAST of Cucsat.G5670.T24 vs. NCBI nr
Match: XP_038874629.1 (uncharacterized protein LOC120067204 [Benincasa hispida] >XP_038874630.1 uncharacterized protein LOC120067204 [Benincasa hispida]) HSP 1 Score: 282 bits (722), Expect = 1.97e-91 Identity = 145/149 (97.32%), Postives = 147/149 (98.66%), Query Frame = 0
BLAST of Cucsat.G5670.T24 vs. ExPASy TrEMBL
Match: A0A0A0KB88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G003440 PE=4 SV=1) HSP 1 Score: 289 bits (740), Expect = 1.83e-94 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Cucsat.G5670.T24 vs. ExPASy TrEMBL
Match: A0A1S3C7E4 (uncharacterized protein LOC103497722 OS=Cucumis melo OX=3656 GN=LOC103497722 PE=4 SV=1) HSP 1 Score: 286 bits (731), Expect = 4.18e-93 Identity = 147/149 (98.66%), Postives = 147/149 (98.66%), Query Frame = 0
BLAST of Cucsat.G5670.T24 vs. ExPASy TrEMBL
Match: A0A5D3BVI6 (Lipase_3 domain-containing protein/Lipase3_N domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001030 PE=4 SV=1) HSP 1 Score: 286 bits (731), Expect = 2.61e-92 Identity = 147/149 (98.66%), Postives = 147/149 (98.66%), Query Frame = 0
BLAST of Cucsat.G5670.T24 vs. ExPASy TrEMBL
Match: A0A6J1H7V0 (uncharacterized protein LOC111460358 OS=Cucurbita moschata OX=3662 GN=LOC111460358 PE=4 SV=1) HSP 1 Score: 274 bits (700), Expect = 1.99e-88 Identity = 139/148 (93.92%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of Cucsat.G5670.T24 vs. ExPASy TrEMBL
Match: A0A6J1L2K2 (uncharacterized protein LOC111499263 OS=Cucurbita maxima OX=3661 GN=LOC111499263 PE=4 SV=1) HSP 1 Score: 273 bits (698), Expect = 3.99e-88 Identity = 138/148 (93.24%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of Cucsat.G5670.T24 vs. TAIR 10
Match: AT3G49050.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 162.5 bits (410), Expect = 2.6e-40 Identity = 86/174 (49.43%), Postives = 117/174 (67.24%), Query Frame = 0
BLAST of Cucsat.G5670.T24 vs. TAIR 10
Match: AT4G00500.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 152.1 bits (383), Expect = 3.5e-37 Identity = 83/150 (55.33%), Postives = 109/150 (72.67%), Query Frame = 0
BLAST of Cucsat.G5670.T24 vs. TAIR 10
Match: AT4G00500.2 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 152.1 bits (383), Expect = 3.5e-37 Identity = 83/150 (55.33%), Postives = 109/150 (72.67%), Query Frame = 0
BLAST of Cucsat.G5670.T24 vs. TAIR 10
Match: AT5G37710.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 105.9 bits (263), Expect = 2.8e-23 Identity = 63/146 (43.15%), Postives = 88/146 (60.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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