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Cucsat.G4651.T6 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGCGGTTCTATAAAGATATCGAACAAGAACTTGAAATATGGCAAGCGAGAGCAAAACTGAAAGGAAACCCAAGACTTTGTGCCTCCATGGCTTTCGGACTAGTGGAGCAATCTTGAGGAAGCAGGTCCAAAGATGGCCAACTTCTGTTCTTCATCAATTCCATCTCCATTTTATCGACGACTCAATCCCTTCCAAAGGAAAATCAGACTTCGAAGGAATTTACGATCCTCCCTATTTCGAGTGGTTTGGAACCAGCGAGGTCCATATTAATTGTTTTTCCTTCCTTTTTTTATTTTCAAGTCTCTCTATATTTCAAATACTGATTCATTCAATTTCTCAGGACCCGACCAATTATGAAAATTTGGAATCGAGCATTGAATTCATCGAGAGTTACATGCTTGAGCACGGACCATTCGACGGACTTCTCGGTTTTTCACAGGTAACTAAGCGTTGATTCTCTTGAATCTGATTTGGATTGAGTTAATTAATAATTTCATAATTTGAAGCTATTTTTAGGGGGCAATGTTATCGGCAGCACTGGCGTTGCTTCAAGCGAGGGTAATTAAACACAGATGGCTGGTTGTTCTTTGTTTTAATCTTTGTTTTCAATTGTCGAAATTTGAATTTTAATCGGCTTGCAGGGAGTTGCACTGACGAAGGTCCCGAAGATCAAATTCGTAATAGTAATTAGCAGTTCGAAACTGCAATCATCATCCTTGGCCGCTCGAATAGTTTATTCTACGTCTATTGCATGCCCATCCCTCCATTTTTTAAGTAACTTTCCGACATCTTCATGTTTCTCATTTTATATTTGTTTTCTTCAAAGTTCGAATCCAACCTTAAAAGAAAATTATTTAAAATATACTCTAAAAACTATTATGAATTGTAA ATGGCAAGCGAGAGCAAAACTGAAAGGAAACCCAAGACTTTGTGCCTCCATGGCTTTCGGACTAGTGGAGCAATCTTGAGGAAGCAGGTCCAAAGATGGCCAACTTCTGTTCTTCATCAATTCCATCTCCATTTTATCGACGACTCAATCCCTTCCAAAGGAAAATCAGACTTCGAAGGAATTTACGATCCTCCCTATTTCGAGTGGTTTGGAACCAGCGAGGACCCGACCAATTATGAAAATTTGGAATCGAGCATTGAATTCATCGAGAGTTACATGCTTGAGCACGGACCATTCGACGGACTTCTCGGTTTTTCACAGGGGGCAATGTTATCGGCAGCACTGGCGTTGCTTCAAGCGAGGGGAGTTGCACTGACGAAGGTCCCGAAGATCAAATTCGTAATAGTAATTAGCAGTTCGAAACTGCAATCATCATCCTTGGCCGCTCGAATAGTTTATTCTACGTCTATTGCATGCCCATCCCTCCATTTTTTAAGTAACTTTCCGACATCTTCATGTTTCTCATTTTATATTTGTTTTCTTCAAAGTTCGAATCCAACCTTAAAAGAAAATTATTTAAAATATACTCTAAAAACTATTATGAATTGT MASESKTERKPKTLCLHGFRTSGAILRKQVQRWPTSVLHQFHLHFIDDSIPSKGKSDFEGIYDPPYFEWFGTSEDPTNYENLESSIEFIESYMLEHGPFDGLLGFSQGAMLSAALALLQARGVALTKVPKIKFVIVISSSKLQSSSLAARIVYSTSIACPSLHFLSNFPTSSCFSFYICFLQSSNPTLKENYLKYTLKTIMNC Homology
BLAST of Cucsat.G4651.T6 vs. ExPASy Swiss-Prot
Match: P36591 (Dihydrofolate reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dfr1 PE=2 SV=2) HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10 Identity = 50/174 (28.74%), Postives = 74/174 (42.53%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. ExPASy Swiss-Prot
Match: S0EES1 (Esterase FUS5 OS=Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) OX=1279085 GN=FUS5 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10 Identity = 43/120 (35.83%), Postives = 66/120 (55.00%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. ExPASy Swiss-Prot
Match: W7MWX7 (Esterase FUS5 OS=Gibberella moniliformis (strain M3125 / FGSC 7600) OX=334819 GN=FUS5 PE=3 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10 Identity = 41/118 (34.75%), Postives = 65/118 (55.08%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. ExPASy Swiss-Prot
Match: Q99369 (Family of serine hydrolases 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FSH3 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.4e-08 Identity = 55/173 (31.79%), Postives = 78/173 (45.09%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. ExPASy Swiss-Prot
Match: O13897 (Uncharacterized hydrolase C22A12.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC22A12.06c PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 7.6e-08 Identity = 55/186 (29.57%), Postives = 79/186 (42.47%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. NCBI nr
Match: XP_004152615.3 (dihydrofolate reductase [Cucumis sativus]) HSP 1 Score: 323 bits (827), Expect = 1.15e-109 Identity = 164/166 (98.80%), Postives = 164/166 (98.80%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. NCBI nr
Match: KGN62961.2 (hypothetical protein Csa_022631 [Cucumis sativus]) HSP 1 Score: 310 bits (794), Expect = 1.21e-104 Identity = 157/166 (94.58%), Postives = 160/166 (96.39%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. NCBI nr
Match: XP_004152616.2 (esterase OVCA2 [Cucumis sativus]) HSP 1 Score: 298 bits (763), Expect = 6.36e-100 Identity = 150/166 (90.36%), Postives = 155/166 (93.37%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. NCBI nr
Match: XP_008444881.1 (PREDICTED: esterase OVCA2-like [Cucumis melo] >KAA0065117.1 esterase OVCA2-like [Cucumis melo var. makuwa]) HSP 1 Score: 280 bits (716), Expect = 9.03e-93 Identity = 139/166 (83.73%), Postives = 151/166 (90.96%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. NCBI nr
Match: XP_038884223.1 (dihydrofolate reductase-like isoform X2 [Benincasa hispida]) HSP 1 Score: 249 bits (635), Expect = 8.41e-81 Identity = 129/180 (71.67%), Postives = 142/180 (78.89%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. ExPASy TrEMBL
Match: A0A0A0LLR4 (FSH1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G369790 PE=4 SV=1) HSP 1 Score: 317 bits (811), Expect = 4.33e-108 Identity = 160/178 (89.89%), Postives = 165/178 (92.70%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. ExPASy TrEMBL
Match: A0A5A7VDJ4 (Esterase OVCA2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004520 PE=4 SV=1) HSP 1 Score: 280 bits (716), Expect = 4.37e-93 Identity = 139/166 (83.73%), Postives = 151/166 (90.96%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. ExPASy TrEMBL
Match: A0A1S3BC58 (esterase OVCA2-like OS=Cucumis melo OX=3656 GN=LOC103488096 PE=4 SV=1) HSP 1 Score: 280 bits (716), Expect = 4.37e-93 Identity = 139/166 (83.73%), Postives = 151/166 (90.96%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. ExPASy TrEMBL
Match: A0A0A0LPK3 (FSH1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G369780 PE=4 SV=1) HSP 1 Score: 224 bits (570), Expect = 2.06e-72 Identity = 105/107 (98.13%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. ExPASy TrEMBL
Match: A0A6J1K941 (dihydrofolate reductase-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492222 PE=4 SV=1) HSP 1 Score: 225 bits (573), Expect = 2.37e-71 Identity = 107/166 (64.46%), Postives = 137/166 (82.53%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. TAIR 10
Match: AT4G24380.2 (CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 181.8 bits (460), Expect = 5.5e-46 Identity = 91/169 (53.85%), Postives = 122/169 (72.19%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. TAIR 10
Match: AT4G24380.1 (INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 179.9 bits (455), Expect = 2.1e-45 Identity = 90/166 (54.22%), Postives = 121/166 (72.89%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. TAIR 10
Match: AT5G65400.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 165.6 bits (418), Expect = 4.1e-41 Identity = 77/161 (47.83%), Postives = 110/161 (68.32%), Query Frame = 0
BLAST of Cucsat.G4651.T6 vs. TAIR 10
Match: AT1G09280.1 (CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 6.0e-08 Identity = 55/192 (28.65%), Postives = 80/192 (41.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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