Cucsat.G4306.T11 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGTACCCTTTACTGTTTTGACCTATAATCAACCATGAAATGAAGCCTTACCAAATGGAATTTTGGATTTGTAGGTGCCTTGTGCAACCAAAGCTGTAAAGGCCAGAAAGAGTTCCCCTGCAAGAACTCGCAGCACTAACTTGCCGGTGACCAATACAACCACAATGCTTGATGTCAAAACGACGAATGCAGTTGCTCCTAGCAACGTTACAGCTTTCTCAAGAACTGACGTCACGGCTGTCTCCAGTTGTATGGATGTCTCTCCCTCTAAATCAGATGGAGTTTCGGTTTCCTTAGATGAAACTATATCCACTTGTGATTCTTTTAAGAGTCCCGACGTCGAGTACTTGGACAATACTGATGTCCCAGCTGTTGATTCTGTTGAAAGGAAAACTAAAAGCAGTCTCTGCATCTCAGGCCATGCACCAATTAGTTGTCAGCCACCAATTAAAGGTGAGCTCATGGATTAGTTTATGAGGATACAACGTTTAAAAACAATGGTAATGAAGTGAGAGTTACGAATTGATTATGTTTTGTTTGCTTCCTTGATCAGGTAGCATATGCAGTAGAGATGTACTTACAGAAATGGAAATAGATGACAACATTGTCGATGTTGATACCGATTTCATGGATCCGCAGCAATGTGCTACAATTGCTTGTGATATTTACAAGCACTTACGAGCATCTGAGGTGATAATCTTCCTGTCCTTATAGAATTTCAAGTACAATCTATATTTACTTTGAGTTATTGGTTCTCAAATTTCTTTCCTTTGTGTTATGTTATTGGTTCAGGCAAAGAAAAGGCCTTCTACAGATTTCATGGAGAAGATTCAGAAGGATATAAATTCAAATATGCGTGCCATACTGGTTGATTGGCTTGTGGAGGTGAATTTTTCTTGTTGACAATATTGGTTTTCAAAAAAAATTCTTCATTCTTTGAGGTTTGACTAAAAGATAAGTTTCATTTGCAGGTAGCAGAAGAGTACAGGCTTGTGCCAGACACTCTATATTTGACTGTCAACTACATTGATCGCTTCCTATCTGGGAATTCGATGGATCGGCAACGATTACAGTTGCTTGGTGTTGCTTGCATGATGATTGCTTCGTAAGAACTGATTGCTATTATTTCTGTTATCCTTCCCACTTCTATTTTTGGTATGATTGTCTGATGCTAACCAGTAAAGATTGTATTCTTTCAGAAAATATGAAGAGATATGTGCGCCTCAAGTGGAAGAATTTTGCTACATTACCGATAACACATATTTTAAAGAAGAGGTATTGGAAATGGAATCTTCTGTTTTGAATTACTTGAAGTTCGAAATGACAGCTCCAACACCGAAATGTTTCTTAAGGCAAGTCAATGTTTGTGATGATGTGTTGGCAATGCTTTCTGTTTCACTTTCCTACATTACCAATGAACTGCTAATTCTGATTTGTCGTTCTCATTGTATAGGCGATTTGTTCGTGCTGCTCAAGGCGCCACCGATCAGAGCACTGATGAGGTTCCATCAATGCAGTTGGAATGCTTGTCCAACTTCCTTGCCGAATTATCTCTTTTAGAATACAGTATGCTCTGCTACGCACCATCACTTGTAGCTGCGTCCGCAATCTTCTTGGCAAAGTTTATTCTTCTTCCAACTAAGAGACCATGGGTATGACACTCGTCTGTATATTTTCTTCCCTGCTCCTTTATGATGAATGAGAGAAAAAAAATAACAAGGAAAAACCAATTAAACTTATACAGTGTATACTCCTCATCTTTGTTACAGAATTCCACCTTGCAGCATTATACACATTATCAGCCATCCGATCTTGTCGACTGCGTTAAAGATTTACATGGCCTCTGCTGTAACAACACTCATAATTCTAGCTTACCAGCCATCAGAGAAAAATACAGCCAGCATAAGGTTAGCTTCAGAGAGAAATACCTTATCAAGTTCTTTTCATTTCTTCATGTTTTTATGCTGATGTTTTTGATGATTTTCTACCTCAGTACAAGCACGTGGCGAAGAAGTACTGCCCTCCGACGATACCACCGGAGTTCTTCCAGAATCAAACACAGTAAATTTGTATTCCAATGCACTGTTGGATTATAGTAGTAGCAGCCTGACTTAACAGCAGTTAGAGATAGAGACATAAAATGCCCCTCCCCTCCCCTCCCCTCATTTTTGTGGATCTTCTCCCTTCTTTCCTTTTTGATGTAAGCCAATGCCACTGGTTATTCTGCATAACGTCGGGATCTCGGCGGTTGTATCGTTGTAAGGAATTACGGAATTACCAAAATGCTGAGATTTGTACAAAGTTCATATGCTTTATTGTCATCTTCCTTCAAAACTTTGTTATATAGAGGCAGTAATGTGTAGAATACTAAATGAAGGAGAAACAACTGAAGCAGCTCAGATATAACTACACCTTAACATTCCTTGATTATTTATGTACACAAAAATGGAGGAAGAGAAAGCACAACCGTTATGTACGAATATATTTATATGTACATAATATTGACATACAAGGAGAGAGAAGCAGCCGTAATATATAAACACAAGTACAGTAAGCGAGACCACGATGGTTGGATGTTTTATGGGCTACATCGAGGCCCAGTTAAGACGGGGCTAACATGATTATGGGCCTTGTTATTTTGGTTAAGCCAGTGACAATCCTCAAAGCCACAGGGTTCCACGTCATATAAACTCTCCACGTTAACGGGGTTGATGTAGCGTGGACTCCACGTGGGGGTCCCATCCTCATAGGAGTTATGAGTCAGCCTCTGAAGATCAGATCCGTCCAATTTAATAGTGTAGATCTCACCGTAGGGTTGATAGTGATGTGGATTTGAAACCGGCTCCCCAGATATCCCCGCATTGTCCGTAGTGAACACTAGAGCTTTCCCATCTGGACGCCAATTCGGGTGGTTCGCCCGACCTCCCAAACCACTCTGAAATAGCTTCCGCAACCCCGTTCCGTTCGGGTGGATCAAAAACAGATCGAAGTTTCCACCACCAGGGTTCTCCCGGTCCGATGAAAACGCGATCCAATCGCCCTCCGGCGACCAACTGCACATTGTATCTGTCCACTGCCCCTCTGTCAGCCGACGAAGACCTTTGCTCTCACCCTCGACCGCGTCCATTATGTATAGATTTTTGTATCCGGTTTGACCCGACCGGAAAACGATCCATTTCCCATCAGGGGACGGCGATGGGAAGGCATTGTTTTCACCGTTTGTCGTCAGCTTCTTGATATTTCTCTCCTCCTCATCAACATTGACTGAAATAATATCCACCTGAGAACTCACCGGAGCAAAATCGGGACCCGCGCTGGTGTATACTACACCTTTCCGCACTGGATCCCACGCTGTGGAGAACGCCGCACCTGAGAACACCTCCCGTTGGTTCGAACCGTCCCGTTCGATGACGTATAACCCCGGGAAGTTCGCGTAGGCTATACGGTCACCGGCGGGCGAAAAAGAGGGAAAAGAAACGGCAATTCTGAATAAGGATAAATTAGAAACAGGGCTACGAACGTTCTCGAAGAGTAGGAGGTTGCTTTTTCTTCTGTTGCCGTCGCCTCTGCACTTGTGGTAACCGATACGAGTCCCATCGGCAGAGACAAACGGATTGAAATGGTGAGAATTGGGCGAAACTGTTTTTGTCAGCTCCTTGAACTCTCCAGTGACGATGTTGAACAACTCTATGTGGCGGAAGGATGAATCGGGTCTTCTCGTCGCAACAGCAATGAGGTTTTTGTTAGCCGATGAAGTGGCAGGAGTAAACACGTGCAATCCAGGGGGAGTGAGGCGTTCGATTATCACTGAATCGAGAGAAATTTCTCCATGACTCGGTAAAATTGCTCTGTATATACTCAGCCACTGGTCGTCGCCTCTCCGGTGAAAATACAGAGTTGAGTCGTCAGCCCAACACGGCCAGCCACCGTGTTCCACGACCTTAACTCGGCGACTTCCGTCACGAGTTAGAAAGATGTATAAATCAGTACTTAGTTCTTCAACATCCCCAGCCCATCCTTTCTCGCCATAGGAAGCCACAGCCGTCCAAATTCCAGATGGCGAAACAGATGGGCTGAAATCGGCGATTCCATAGGGCGTCAATCGCCGAGTTAGACCCGATTTCAAATTCCTTGAATACACCGCCGCCCAACTCGTTCTGGACTCGCGAGGATCCTCGTGAGTCGACACGTACACCAAATAATCGCCACTTAAACTGGGGCGATCTTTGAAGGAAACCTTAGCTTCGTTTTTCTGTTCCTCATCCAAAAGGGGAATTTGCAGTCGATGAGGAATCTCGAGCTCCGAACGCCGCCTGGCACTGACTCCGATACCGCCAAAAACCGCATCGTAGAAGATTGTAGAGATTCCATTCCTCTCTGTGACATAGACGAGTTCGAAATCCGGTGTGAAGGAGTGTGATTGATTCGTTAAAAGCGATATAAGGGAAGAAGAGGAGGTGGAGGAAGGGAAATAGCCATTGAAATTGACGTATTGGCCGTCGGTGATTAGGATTTCATCCGGTAAAGAAGGGTTTTTATTAGCGTCAGCCGGTAAGGTGTAGATATCGAAGGCGTAGAAGGATCTGCCGAGGGTGGTGAAGACTATGCTGTGGCCACCTGAAACGTTGGCGGAGAAGGCGGGAAGGAGAGAAGAAAAGTGAAGAAGGAAAAAGAGGAGTAGGGAAGGCATGACGATAGGAAAGAGGGCGGAGAGATCGGGGGAAATGGGGAAGATTAAGATGCTAGTGATCAGTGGTCTGTGGAGGGGATACTGGATAGTAGACACGTGGCAGATAACTGGGTGCT ATGCTTGATGTCAAAACGACGAATGCAGTTGCTCCTAGCAACGTTACAGCTTTCTCAAGAACTGACGTCACGGCTGTCTCCAGTTGTATGGATGTCTCTCCCTCTAAATCAGATGGAGTTTCGGTTTCCTTAGATGAAACTATATCCACTTGTGATTCTTTTAAGAGTCCCGACGTCGAGTACTTGGACAATACTGATGTCCCAGCTGTTGATTCTGTTGAAAGGAAAACTAAAAGCAGTCTCTGCATCTCAGGCCATGCACCAATTAGTTGTCAGCCACCAATTAAAGGTAGCATATGCAGTAGAGATGTACTTACAGAAATGGAAATAGATGACAACATTGTCGATGTTGATACCGATTTCATGGATCCGCAGCAATGTGCTACAATTGCTTGTGATATTTACAAGCACTTACGAGCATCTGAGGCAAAGAAAAGGCCTTCTACAGATTTCATGGAGAAGATTCAGAAGGATATAAATTCAAATATGCGTGCCATACTGGTTGATTGGCTTGTGGAGGTAGCAGAAGAGTACAGGCTTGTGCCAGACACTCTATATTTGACTGTCAACTACATTGATCGCTTCCTATCTGGGAATTCGATGGATCGGCAACGATTACAGTTGCTTGGTGTTGCTTGCATGATGATTGCTTCAAAATATGAAGAGATATGTGCGCCTCAAGTGGAAGAATTTTGCTACATTACCGATAACACATATTTTAAAGAAGAGGTATTGGAAATGGAATCTTCTGTTTTGAATTACTTGAAGTTCGAAATGACAGCTCCAACACCGAAATGTTTCTTAAGGCAAGTCAATGTTTGTGATGATGTGTTGGCAATGCTTTCTGTTTCACTTTCCTACATTACCAATGAACTGCTAATTCTGATTTGTCGTTCTCATTGTATAGGCGATTTGTTCGTGCTGCTCAAGGCGCCACCGATCAGAGCACTGATGAGGTTCCATCAATGCAGTTGGAATGCTTGTCCAACTTCCTTGCCGAATTATCTCTTTTAG MLDVKTTNAVAPSNVTAFSRTDVTAVSSCMDVSPSKSDGVSVSLDETISTCDSFKSPDVEYLDNTDVPAVDSVERKTKSSLCISGHAPISCQPPIKGSICSRDVLTEMEIDDNIVDVDTDFMDPQQCATIACDIYKHLRASEAKKRPSTDFMEKIQKDINSNMRAILVDWLVEVAEEYRLVPDTLYLTVNYIDRFLSGNSMDRQRLQLLGVACMMIASKYEEICAPQVEEFCYITDNTYFKEEVLEMESSVLNYLKFEMTAPTPKCFLRQVNVCDDVLAMLSVSLSYITNELLILICRSHCIGDLFVLLKAPPIRALMRFHQCSWNACPTSLPNYLF Homology
BLAST of Cucsat.G4306.T11 vs. ExPASy Swiss-Prot
Match: Q9C6Y3 (Cyclin-A1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCA1-1 PE=1 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 2.5e-88 Identity = 174/266 (65.41%), Postives = 212/266 (79.70%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. ExPASy Swiss-Prot
Match: Q0JPA4 (Cyclin-A1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCA1-2 PE=3 SV=2) HSP 1 Score: 309.7 bits (792), Expect = 4.1e-83 Identity = 162/240 (67.50%), Postives = 194/240 (80.83%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. ExPASy Swiss-Prot
Match: Q7F830 (Cyclin-A1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCA1-1 PE=2 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 5.3e-83 Identity = 168/260 (64.62%), Postives = 201/260 (77.31%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. ExPASy Swiss-Prot
Match: Q0INT0 (Cyclin-A1-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCA1-3 PE=2 SV=2) HSP 1 Score: 308.9 bits (790), Expect = 7.0e-83 Identity = 161/240 (67.08%), Postives = 193/240 (80.42%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. ExPASy Swiss-Prot
Match: Q0DJR9 (Cyclin-A1-4 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCA1-4 PE=2 SV=2) HSP 1 Score: 258.5 bits (659), Expect = 1.1e-67 Identity = 143/264 (54.17%), Postives = 188/264 (71.21%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. NCBI nr
Match: XP_004149427.1 (cyclin-A1-1 [Cucumis sativus] >KGN47698.1 hypothetical protein Csa_018249 [Cucumis sativus]) HSP 1 Score: 530 bits (1366), Expect = 5.71e-185 Identity = 268/270 (99.26%), Postives = 269/270 (99.63%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. NCBI nr
Match: KAA0055489.1 (cyclin-A1-1 [Cucumis melo var. makuwa]) HSP 1 Score: 526 bits (1356), Expect = 1.76e-183 Identity = 266/274 (97.08%), Postives = 269/274 (98.18%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. NCBI nr
Match: XP_008466750.1 (PREDICTED: cyclin-A1-1 [Cucumis melo] >TYK08969.1 cyclin-A1-1 [Cucumis melo var. makuwa]) HSP 1 Score: 516 bits (1329), Expect = 2.46e-179 Identity = 261/270 (96.67%), Postives = 265/270 (98.15%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. NCBI nr
Match: XP_023550099.1 (cyclin-A1-1-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 480 bits (1235), Expect = 3.04e-165 Identity = 253/338 (74.85%), Postives = 277/338 (81.95%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. NCBI nr
Match: KAG7016472.1 (Cyclin-A1-1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 480 bits (1235), Expect = 3.14e-165 Identity = 253/338 (74.85%), Postives = 277/338 (81.95%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. ExPASy TrEMBL
Match: A0A0A0KDS0 (B-like cyclin OS=Cucumis sativus OX=3659 GN=Csa_6G382370 PE=3 SV=1) HSP 1 Score: 530 bits (1366), Expect = 2.77e-185 Identity = 268/270 (99.26%), Postives = 269/270 (99.63%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. ExPASy TrEMBL
Match: A0A5A7UPU9 (B-like cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold221G00670 PE=3 SV=1) HSP 1 Score: 526 bits (1356), Expect = 8.53e-184 Identity = 266/274 (97.08%), Postives = 269/274 (98.18%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. ExPASy TrEMBL
Match: A0A5D3CF82 (B-like cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00640 PE=3 SV=1) HSP 1 Score: 516 bits (1329), Expect = 1.19e-179 Identity = 261/270 (96.67%), Postives = 265/270 (98.15%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. ExPASy TrEMBL
Match: A0A1S3CS10 (B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103504089 PE=3 SV=1) HSP 1 Score: 516 bits (1329), Expect = 1.19e-179 Identity = 261/270 (96.67%), Postives = 265/270 (98.15%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. ExPASy TrEMBL
Match: A0A6J1FF72 (B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111444914 PE=3 SV=1) HSP 1 Score: 478 bits (1230), Expect = 8.44e-165 Identity = 252/338 (74.56%), Postives = 276/338 (81.66%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. TAIR 10
Match: AT1G44110.1 (Cyclin A1;1 ) HSP 1 Score: 327.0 bits (837), Expect = 1.8e-89 Identity = 174/266 (65.41%), Postives = 212/266 (79.70%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. TAIR 10
Match: AT1G77390.1 (CYCLIN A1;2 ) HSP 1 Score: 251.9 bits (642), Expect = 7.2e-67 Identity = 146/319 (45.77%), Postives = 193/319 (60.50%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. TAIR 10
Match: AT1G80370.1 (Cyclin A2;4 ) HSP 1 Score: 204.9 bits (520), Expect = 1.0e-52 Identity = 99/156 (63.46%), Postives = 122/156 (78.21%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. TAIR 10
Match: AT1G15570.1 (CYCLIN A2;3 ) HSP 1 Score: 200.3 bits (508), Expect = 2.5e-51 Identity = 96/156 (61.54%), Postives = 121/156 (77.56%), Query Frame = 0
BLAST of Cucsat.G4306.T11 vs. TAIR 10
Match: AT5G11300.1 (mitotic-like cyclin 3B from Arabidopsis ) HSP 1 Score: 199.5 bits (506), Expect = 4.2e-51 Identity = 95/180 (52.78%), Postives = 134/180 (74.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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