Cucsat.G4258.T17 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G4258.T17
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Ubinuclein-1-like isoform X2
Location	ctg1170: 273307 .. 274685 (-)
RNA-Seq Expression	Cucsat.G4258.T17
Synteny	Cucsat.G4258.T17

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTTCTGAAGTTCCTTCATATAAATTTTATTGTGATAGTTATAGCTCCTCTCATCAATATCGTAGTTTTGAAACTCGGTTAAATCTGTGGCATTGACTATCGTTTTATCCAGCTTGCAGAATTGTGGCCAAATGGGTTCATGGATAATCATGGGATCAAACGTGCAATATGCAGGGCAAAAGAGAGGCGGAGAGCGTTGCATGGCAGGCACAAGGTAATGTTGCTCCCCTTATTTTTTTCATTCCCTAATTAAGCTTTCAGTAAATTTTGGTGAACTTCTACTCTGATAAGCAAATTGTTCTATTCCGTTGATAAAATTGCTTTTTTACATTCAGCCCCGTGAGTTGATTTTTATCTTTTTAAAGACCAGTGTTACGTTTCTGGATTCATATTGGCTGCTGCTTGTAACGTTTGTTTTTTTGGCACTCCAATCTTGTAGGATCAAGAGAAAATCAAGAGGAAAAAGATTTTACCACCTAGAGTAGACGAGACCGTTAGAAATGAGGTTGGTACAGTTGCTCAGCCTCAGTATGCCCGAGAGAGATTAGCCTCAGAGTCGGGTTTACAGCCAACCCCGGCAACCAAGCCTGCATCTGTTTCGATGGTTGCAGCAGCCCAGCTACAAAGTGCTTCTAGTGTTGGAAATATAGACAGGCTAAAATCCGAGAAGATGAAGGTAAGCTCAAGCAGTTCCCATGAGGATGCGAGAATCGTGGACGGTGCATTAACCAAGAAAAAGACAAAGAGGAAGGCAGAGGTGGAGTTGGAGGAAACTCATAATCGGCCTGAAAAGGCATCCACCCAACATGGAGATGAAAAACACAAGTCCACAAACAAGCCAACTGCGAGTCTTCCTCCTAAGCCAAACATTCAATCAGCTGCTCCTTCAAGTCTGGAACAGTCAAGCTAACATGATACTACTCATGAGTCTAATCTACACCATAATAATGTTCTATCACACATCGCCACTCTCATCGTGTCGCACAAAATTTTCTCCCCCTTCCCCTTTCTTTCTCTTACTCGGGTTTCATTTATCGACCCACGAAAAAAGCCAAAATGAAGAAGCCATTTTTGTAATTACATGTTGGTTCGTGCATGGGGCTTTCTGGATGGATTAGAAATGTATCTTAAAAGTAGGGAGCGCTGAAGTAGCAATTTTATTTGGCAAGTAGTCAATTTGAAGCCCTCTTTTTTTTTTCTTCCTTACTTTCTTTTACTTTGTAGTTTGTAGCTTTTATCACCAAAATTTAACCTCCAGTTTTAGAGCTTGAAATTGAAACTCACACTTTGATGATCGCCACAGCAGCGTGTGGGATCATCATCTACCAATTTGTTGACACCCATCATTCTTAAGGTTCAATCAATTAGTCCACACTAA

Coding sequence (CDS)

ATGGATAATCATGGGATCAAACGTGCAATATGCAGGGCAAAAGAGAGGCGGAGAGCGTTGCATGGCAGGCACAAGGATCAAGAGAAAATCAAGAGGAAAAAGATTTTACCACCTAGAGTAGACGAGACCGTTAGAAATGAGGTTGGTACAGTTGCTCAGCCTCAGTATGCCCGAGAGAGATTAGCCTCAGAGTCGGGTTTACAGCCAACCCCGGCAACCAAGCCTGCATCTGTTTCGATGGTTGCAGCAGCCCAGCTACAAAGTGCTTCTAGTGTTGGAAATATAGACAGGCTAAAATCCGAGAAGATGAAGGTAAGCTCAAGCAGTTCCCATGAGGATGCGAGAATCGTGGACGGTGCATTAACCAAGAAAAAGACAAAGAGGAAGGCAGAGGTGGAGTTGGAGGAAACTCATAATCGGCCTGAAAAGGCATCCACCCAACATGGAGATGAAAAACACAAGTCCACAAACAAGCCAACTGCGAGTCTTCCTCCTAAGCCAAACATTCAATCAGCTGCTCCTTCAAGTCTGGAACAGTCAAGCTAA

Protein sequence

MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPASVSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS

Homology

[Close]

BLAST of Cucsat.G4258.T17 vs. NCBI nr
Match: XP_004149441.1 (ubinuclein-1 isoform X2 [Cucumis sativus] >KGN47689.1 hypothetical protein Csa_018301 [Cucumis sativus])

HSP 1 Score: 327 bits (838), Expect = 9.55e-105
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 60
           MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER
Sbjct: 581 MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 640

Query: 61  LASESGLQPTPATKPASVSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGA 120
           LASESGLQPTPATKPASVSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGA
Sbjct: 641 LASESGLQPTPATKPASVSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGA 700

Query: 121 LTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQS 180
           LTKKKTKRKAEVELEETHNRPEKAS QHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQS
Sbjct: 701 LTKKKTKRKAEVELEETHNRPEKASIQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQS 760

[Close]

BLAST of Cucsat.G4258.T17 vs. NCBI nr
Match: XP_011657419.1 (ubinuclein-1 isoform X1 [Cucumis sativus])

HSP 1 Score: 327 bits (838), Expect = 9.77e-105
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 60
           MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER
Sbjct: 582 MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 641

Query: 61  LASESGLQPTPATKPASVSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGA 120
           LASESGLQPTPATKPASVSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGA
Sbjct: 642 LASESGLQPTPATKPASVSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGA 701

Query: 121 LTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQS 180
           LTKKKTKRKAEVELEETHNRPEKAS QHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQS
Sbjct: 702 LTKKKTKRKAEVELEETHNRPEKASIQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQS 761

[Close]

BLAST of Cucsat.G4258.T17 vs. NCBI nr
Match: XP_016903617.1 (PREDICTED: uncharacterized protein LOC103504093 isoform X4 [Cucumis melo])

HSP 1 Score: 307 bits (787), Expect = 2.03e-98
Identity = 172/182 (94.51%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 60
           MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER
Sbjct: 457 MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 516

Query: 61  LASESGLQPTPATKPASVSMVAAAQLQSAS-SVGNIDRLKSEKMKVSSSSSHEDARIVDG 120
           LASESG QPTP TK ASV MVAAAQLQS S SVGN+DRLKSEKMKVSSSSSHED RIVDG
Sbjct: 517 LASESGPQPTPVTKAASVLMVAAAQLQSPSMSVGNLDRLKSEKMKVSSSSSHEDTRIVDG 576

Query: 121 ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQ 180
           ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTAS PPKPNIQSAAPSS+EQ
Sbjct: 577 ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASHPPKPNIQSAAPSSMEQ 636

[Close]

BLAST of Cucsat.G4258.T17 vs. NCBI nr
Match: XP_016903616.1 (PREDICTED: uncharacterized protein LOC103504093 isoform X3 [Cucumis melo])

HSP 1 Score: 307 bits (787), Expect = 2.08e-98
Identity = 172/182 (94.51%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 60
           MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER
Sbjct: 458 MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 517

Query: 61  LASESGLQPTPATKPASVSMVAAAQLQSAS-SVGNIDRLKSEKMKVSSSSSHEDARIVDG 120
           LASESG QPTP TK ASV MVAAAQLQS S SVGN+DRLKSEKMKVSSSSSHED RIVDG
Sbjct: 518 LASESGPQPTPVTKAASVLMVAAAQLQSPSMSVGNLDRLKSEKMKVSSSSSHEDTRIVDG 577

Query: 121 ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQ 180
           ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTAS PPKPNIQSAAPSS+EQ
Sbjct: 578 ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASHPPKPNIQSAAPSSMEQ 637

[Close]

BLAST of Cucsat.G4258.T17 vs. NCBI nr
Match: XP_008466757.1 (PREDICTED: ubinuclein-1-like isoform X2 [Cucumis melo] >TYJ95740.1 ubinuclein-1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 307 bits (787), Expect = 3.67e-97
Identity = 172/182 (94.51%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 60
           MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER
Sbjct: 581 MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 640

Query: 61  LASESGLQPTPATKPASVSMVAAAQLQSAS-SVGNIDRLKSEKMKVSSSSSHEDARIVDG 120
           LASESG QPTP TK ASV MVAAAQLQS S SVGN+DRLKSEKMKVSSSSSHED RIVDG
Sbjct: 641 LASESGPQPTPVTKAASVLMVAAAQLQSPSMSVGNLDRLKSEKMKVSSSSSHEDTRIVDG 700

Query: 121 ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQ 180
           ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTAS PPKPNIQSAAPSS+EQ
Sbjct: 701 ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASHPPKPNIQSAAPSSMEQ 760

[Close]

BLAST of Cucsat.G4258.T17 vs. ExPASy TrEMBL
Match: A0A0A0KFR0 (HUN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G381790 PE=4 SV=1)

HSP 1 Score: 327 bits (838), Expect = 4.62e-105
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 60
           MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER
Sbjct: 581 MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 640

Query: 61  LASESGLQPTPATKPASVSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGA 120
           LASESGLQPTPATKPASVSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGA
Sbjct: 641 LASESGLQPTPATKPASVSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGA 700

Query: 121 LTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQS 180
           LTKKKTKRKAEVELEETHNRPEKAS QHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQS
Sbjct: 701 LTKKKTKRKAEVELEETHNRPEKASIQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQS 760

[Close]

BLAST of Cucsat.G4258.T17 vs. ExPASy TrEMBL
Match: A0A1S4E5X1 (uncharacterized protein LOC103504093 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103504093 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 9.82e-99
Identity = 172/182 (94.51%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 60
           MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER
Sbjct: 457 MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 516

Query: 61  LASESGLQPTPATKPASVSMVAAAQLQSAS-SVGNIDRLKSEKMKVSSSSSHEDARIVDG 120
           LASESG QPTP TK ASV MVAAAQLQS S SVGN+DRLKSEKMKVSSSSSHED RIVDG
Sbjct: 517 LASESGPQPTPVTKAASVLMVAAAQLQSPSMSVGNLDRLKSEKMKVSSSSSHEDTRIVDG 576

Query: 121 ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQ 180
           ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTAS PPKPNIQSAAPSS+EQ
Sbjct: 577 ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASHPPKPNIQSAAPSSMEQ 636

[Close]

BLAST of Cucsat.G4258.T17 vs. ExPASy TrEMBL
Match: A0A1S4E5U7 (uncharacterized protein LOC103504093 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103504093 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 1.01e-98
Identity = 172/182 (94.51%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 60
           MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER
Sbjct: 458 MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 517

Query: 61  LASESGLQPTPATKPASVSMVAAAQLQSAS-SVGNIDRLKSEKMKVSSSSSHEDARIVDG 120
           LASESG QPTP TK ASV MVAAAQLQS S SVGN+DRLKSEKMKVSSSSSHED RIVDG
Sbjct: 518 LASESGPQPTPVTKAASVLMVAAAQLQSPSMSVGNLDRLKSEKMKVSSSSSHEDTRIVDG 577

Query: 121 ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQ 180
           ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTAS PPKPNIQSAAPSS+EQ
Sbjct: 578 ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASHPPKPNIQSAAPSSMEQ 637

[Close]

BLAST of Cucsat.G4258.T17 vs. ExPASy TrEMBL
Match: A0A5D3B6W4 (Ubinuclein-1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold282G00440 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 1.78e-97
Identity = 172/182 (94.51%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 60
           MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER
Sbjct: 581 MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 640

Query: 61  LASESGLQPTPATKPASVSMVAAAQLQSAS-SVGNIDRLKSEKMKVSSSSSHEDARIVDG 120
           LASESG QPTP TK ASV MVAAAQLQS S SVGN+DRLKSEKMKVSSSSSHED RIVDG
Sbjct: 641 LASESGPQPTPVTKAASVLMVAAAQLQSPSMSVGNLDRLKSEKMKVSSSSSHEDTRIVDG 700

Query: 121 ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQ 180
           ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTAS PPKPNIQSAAPSS+EQ
Sbjct: 701 ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASHPPKPNIQSAAPSSMEQ 760

[Close]

BLAST of Cucsat.G4258.T17 vs. ExPASy TrEMBL
Match: A0A1S3CRZ1 (ubinuclein-1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504093 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 1.78e-97
Identity = 172/182 (94.51%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 60
           MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER
Sbjct: 581 MDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARER 640

Query: 61  LASESGLQPTPATKPASVSMVAAAQLQSAS-SVGNIDRLKSEKMKVSSSSSHEDARIVDG 120
           LASESG QPTP TK ASV MVAAAQLQS S SVGN+DRLKSEKMKVSSSSSHED RIVDG
Sbjct: 641 LASESGPQPTPVTKAASVLMVAAAQLQSPSMSVGNLDRLKSEKMKVSSSSSHEDTRIVDG 700

Query: 121 ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQ 180
           ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTAS PPKPNIQSAAPSS+EQ
Sbjct: 701 ALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASHPPKPNIQSAAPSSMEQ 760

The following BLAST results are available for this feature:

BLAST of Cucsat.G4258.T17 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G4258.T17 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149441.1	9.55e-105	99.45	ubinuclein-1 isoform X2 [Cucumis sativus] >KGN47689.1 hypothetical protein Csa_0...	[more]
XP_011657419.1	9.77e-105	99.45	ubinuclein-1 isoform X1 [Cucumis sativus]	[more]
XP_016903617.1	2.03e-98	94.51	PREDICTED: uncharacterized protein LOC103504093 isoform X4 [Cucumis melo]	[more]
XP_016903616.1	2.08e-98	94.51	PREDICTED: uncharacterized protein LOC103504093 isoform X3 [Cucumis melo]	[more]
XP_008466757.1	3.67e-97	94.51	PREDICTED: ubinuclein-1-like isoform X2 [Cucumis melo] >TYJ95740.1 ubinuclein-1-...	[more]

BLAST of Cucsat.G4258.T17 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFR0	4.62e-105	99.45	HUN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G381790 PE=4 SV...	[more]
A0A1S4E5X1	9.82e-99	94.51	uncharacterized protein LOC103504093 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E5U7	1.01e-98	94.51	uncharacterized protein LOC103504093 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3B6W4	1.78e-97	94.51	Ubinuclein-1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CRZ1	1.78e-97	94.51	ubinuclein-1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504093 PE=4 SV=1	[more]

BLAST of Cucsat.G4258.T17 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..181
None	No IPR available	PANTHER	PTHR21669:SF27	WOUND-RESPONSIVE FAMILY PROTEIN	coord: 1..181
None	No IPR available	PANTHER	PTHR21669	CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS	coord: 1..181

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G4258	Cucsat.G4258	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4258.T17.E1	Cucsat.G4258.T17.E1	exon
Cucsat.G4258.T17.E2	Cucsat.G4258.T17.E2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4258.T17.C2	Cucsat.G4258.T17.C2	CDS
Cucsat.G4258.T17.C1	Cucsat.G4258.T17.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4258.T17	Cucsat.G4258.T17-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006336	DNA replication-independent chromatin assembly
cellular_component	GO:0005634	nucleus