Cucsat.G4258.T16 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G4258.T16
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Ubinuclein-1-like isoform X2
Location	ctg1170: 273327 .. 275284 (-)
RNA-Seq Expression	Cucsat.G4258.T16
Synteny	Cucsat.G4258.T16

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTGCTGTTAATAGAGAGTATCAAATAACTTTCAGGTAATAGAACAGCAAGGTGGAGCACCTCAAGATGTCCGTGAACTTGTTTCTGAAGAAAAAGGAGTTCCGAGAAAGAAATTTGCTATGGATCCTTCACTGGAGGACAAAATTTGTGATCTCTATGATCTGTTTGTTGATGTACTACTGCTTCATGTCCCTAGTGACCTTCAAATATTTTCTTTCTCAATTAATTTTGAACTTTCTTACATCTCTATTTGTTTATGGCTCCAGGGACTGGATGAGGATGCTGGTCCACAAATCAGAAAGTTGTACGCAGAGGTAGTCCAATCATTTATTCTTAAATTTCTCAATCAGCTATTTTATCCGTTTGCCTCCATTTTGTGGAGGGGGTACGGTGATGTTAGTTAGGTTACTAAAATATATCATGAAAGCATCCAGTTCGATTATATTTCGTGGATACTTTGTCATTAAAGTTGAATGAAATGGTTTCTTATATAGAAGGTCTTTGCAATTAAAGTTGTCTGCACTACACAGACGCTCACTTTGTGTCTGATTTATCAAGTGCCAGTTCTTTTTTATGAATTTTTGTAGTATCTCTCAAAATCTTCTGAAGTTCCTTCATATAAATTTTATTGTGATAGTTATAGCTCCTCTCATCAATATCGTAGTTTTGAAACTCGGTTAAATCTGTGGCATTGACTATCGTTTTATCCAGCTTGCAGAATTGTGGCCAAATGGGTTCATGGATAATCATGGGATCAAACGTGCAATATGCAGGGCAAAAGAGAGGCGGAGAGCGTTGCATGGCAGGCACAAGGTAATGTTGCTCCCCTTATTTTTTTCATTCCCTAATTAAGCTTTCAGTAAATTTTGGTGAACTTCTACTCTGATAAGCAAATTGTTCTATTCCGTTGATAAAATTGCTTTTTTACATTCAGCCCCGTGAGTTGATTTTTATCTTTTTAAAGACCAGTGTTACGTTTCTGGATTCATATTGGCTGCTGCTTGTAACGTTTGTTTTTTTGGCACTCCAATCTTGTAGGATCAAGAGAAAATCAAGAGGAAAAAGATTTTACCACCTAGAGTAGACGAGACCGTTAGAAATGAGGTTGGTACAGTTGCTCAGCCTCAGTATGCCCGAGAGAGATTAGCCTCAGAGTCGGGTTTACAGCCAACCCCGGCAACCAAGCCTGCATCTGTTTCGATGGTTGCAGCAGCCCAGCTACAAAGTGCTTCTAGTGTTGGAAATATAGACAGGCTAAAATCCGAGAAGATGAAGGTAAGCTCAAGCAGTTCCCATGAGGATGCGAGAATCGTGGACGGTGCATTAACCAAGAAAAAGACAAAGAGGAAGGCAGAGGTGGAGTTGGAGGAAACTCATAATCGGCCTGAAAAGGCATCCACCCAACATGGAGATGAAAAACACAAGTCCACAAACAAGCCAACTGCGAGTCTTCCTCCTAAGCCAAACATTCAATCAGCTGCTCCTTCAAGTCTGGAACAGTCAAGCTAACATGATACTACTCATGAGTCTAATCTACACCATAATAATGTTCTATCACACATCGCCACTCTCATCGTGTCGCACAAAATTTTCTCCCCCTTCCCCTTTCTTTCTCTTACTCGGGTTTCATTTATCGACCCACGAAAAAAGCCAAAATGAAGAAGCCATTTTTGTAATTACATGTTGGTTCGTGCATGGGGCTTTCTGGATGGATTAGAAATGTATCTTAAAAGTAGGGAGCGCTGAAGTAGCAATTTTATTTGGCAAGTAGTCAATTTGAAGCCCTCTTTTTTTTTTCTTCCTTACTTTCTTTTACTTTGTAGTTTGTAGCTTTTATCACCAAAATTTAACCTCCAGTTTTAGAGCTTGAAATTGAAACTCACACTTTGATGATCGCCACAGCAGCGTGTGGGATCATCATCTACCAATTTGTTGACACCCATCATTCTTAAGGTTC

Coding sequence (CDS)

ATGGATCCTTCACTGGAGGACAAAATTTGTGATCTCTATGATCTGTTTGTTGATGGACTGGATGAGGATGCTGGTCCACAAATCAGAAAGTTGTACGCAGAGCTTGCAGAATTGTGGCCAAATGGGTTCATGGATAATCATGGGATCAAACGTGCAATATGCAGGGCAAAAGAGAGGCGGAGAGCGTTGCATGGCAGGCACAAGGATCAAGAGAAAATCAAGAGGAAAAAGATTTTACCACCTAGAGTAGACGAGACCGTTAGAAATGAGGTTGGTACAGTTGCTCAGCCTCAGTATGCCCGAGAGAGATTAGCCTCAGAGTCGGGTTTACAGCCAACCCCGGCAACCAAGCCTGCATCTGTTTCGATGGTTGCAGCAGCCCAGCTACAAAGTGCTTCTAGTGTTGGAAATATAGACAGGCTAAAATCCGAGAAGATGAAGGTAAGCTCAAGCAGTTCCCATGAGGATGCGAGAATCGTGGACGGTGCATTAACCAAGAAAAAGACAAAGAGGAAGGCAGAGGTGGAGTTGGAGGAAACTCATAATCGGCCTGAAAAGGCATCCACCCAACATGGAGATGAAAAACACAAGTCCACAAACAAGCCAACTGCGAGTCTTCCTCCTAAGCCAAACATTCAATCAGCTGCTCCTTCAAGTCTGGAACAGTCAAGCTAA

Protein sequence

MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERRRALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPASVSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEETHNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS

Homology

[Close]

BLAST of Cucsat.G4258.T16 vs. ExPASy Swiss-Prot
Match: Q8RX78 (Ubinuclein-1 OS=Arabidopsis thaliana OX=3702 GN=UBN1 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.4e-23
Identity = 82/196 (41.84%), Postives = 109/196 (55.61%), Query Frame = 0


Query: 1   MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 60
           MD +LEDK+CDLYD+F+DGLDED GPQ +KLY  LAELWPN  MD  GIK AI RAKERR
Sbjct: 484 MDAALEDKLCDLYDIFIDGLDEDQGPQTKKLYVNLAELWPNRLMDYRGIKHAIFRAKERR 543

Query: 61  RALHG---RHKDQEKIKRK-KILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPAT 120
           +AL+G   +  DQ K+K+  K L PR D T +     V Q Q+     + E  L   P  
Sbjct: 544 KALYGNLAKEMDQTKMKKSMKQLVPRTDCTAQPNTELVVQRQH-----SGEKKLIVDPNA 603

Query: 121 KPASVSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSH--EDARIVDGALTKKKTKRKAE 180
              SV       + S + V   ++ + EK+K  SSS +  E+ R+V     +K     AE
Sbjct: 604 TSTSV-------VTSQTMVDRSNQQQPEKLKGISSSCNPTEETRVV----KRKNEAVMAE 663

Query: 181 VELEETHNRPEKASTQ 191
            ++     +PE   T+
Sbjct: 664 KQVVLALKKPEHPQTR 663

[Close]

BLAST of Cucsat.G4258.T16 vs. ExPASy Swiss-Prot
Match: F4I700 (Ubinuclein-2 OS=Arabidopsis thaliana OX=3702 GN=UBN2 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.5e-22
Identity = 77/189 (40.74%), Postives = 108/189 (57.14%), Query Frame = 0


Query: 1   MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 60
           MD +LE+K+CDLYD+FV+G+DE +G QIRKLY++LA+LWPN  +DNH I+RAICR KERR
Sbjct: 499 MDVALEEKLCDLYDVFVEGMDEHSGSQIRKLYSDLAQLWPNSLVDNHEIRRAICREKERR 558

Query: 61  RALH---GRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATK 120
           RAL    G+  DQ KI +KK       + V    G +  P          SG++   A+ 
Sbjct: 559 RALEGNIGKEMDQTKITKKK-----QTQLVPKSEG-ITYPD-------KTSGVE-VKASV 618

Query: 121 PASVSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVEL 180
             + +  +    Q A+   + +R K +  K+  +SS     + + A   KK +RK E  L
Sbjct: 619 VLTATTTSLVDCQPAAD-SSFERSKQQHEKLKRTSS-----LSNPAAEGKKVRRKTEPAL 667

Query: 181 EETHNRPEK 187
           EETH   EK
Sbjct: 679 EETHLPAEK 667

[Close]

BLAST of Cucsat.G4258.T16 vs. NCBI nr
Match: XP_004149441.1 (ubinuclein-1 isoform X2 [Cucumis sativus] >KGN47689.1 hypothetical protein Csa_018301 [Cucumis sativus])

HSP 1 Score: 417 bits (1072), Expect = 5.35e-139
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 60
           MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR
Sbjct: 538 MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 597

Query: 61  RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPAS 120
           RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPAS
Sbjct: 598 RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPAS 657

Query: 121 VSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEET 180
           VSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEET
Sbjct: 658 VSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEET 717

Query: 181 HNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS 224
           HNRPEKAS QHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS
Sbjct: 718 HNRPEKASIQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS 761

[Close]

BLAST of Cucsat.G4258.T16 vs. NCBI nr
Match: XP_011657419.1 (ubinuclein-1 isoform X1 [Cucumis sativus])

HSP 1 Score: 417 bits (1072), Expect = 5.49e-139
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 60
           MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR
Sbjct: 539 MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 598

Query: 61  RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPAS 120
           RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPAS
Sbjct: 599 RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPAS 658

Query: 121 VSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEET 180
           VSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEET
Sbjct: 659 VSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEET 718

Query: 181 HNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS 224
           HNRPEKAS QHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS
Sbjct: 719 HNRPEKASIQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS 762

[Close]

BLAST of Cucsat.G4258.T16 vs. NCBI nr
Match: XP_016903617.1 (PREDICTED: uncharacterized protein LOC103504093 isoform X4 [Cucumis melo])

HSP 1 Score: 397 bits (1021), Expect = 7.88e-133
Identity = 215/225 (95.56%), Postives = 217/225 (96.44%), Query Frame = 0


Query: 1   MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 60
           MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR
Sbjct: 414 MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 473

Query: 61  RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPAS 120
           RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESG QPTP TK AS
Sbjct: 474 RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGPQPTPVTKAAS 533

Query: 121 VSMVAAAQLQSAS-SVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEE 180
           V MVAAAQLQS S SVGN+DRLKSEKMKVSSSSSHED RIVDGALTKKKTKRKAEVELEE
Sbjct: 534 VLMVAAAQLQSPSMSVGNLDRLKSEKMKVSSSSSHEDTRIVDGALTKKKTKRKAEVELEE 593

Query: 181 THNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS 224
           THNRPEKASTQHGDEKHKSTNKPTAS PPKPNIQSAAPSS+EQSS
Sbjct: 594 THNRPEKASTQHGDEKHKSTNKPTASHPPKPNIQSAAPSSMEQSS 638

[Close]

BLAST of Cucsat.G4258.T16 vs. NCBI nr
Match: XP_016903616.1 (PREDICTED: uncharacterized protein LOC103504093 isoform X3 [Cucumis melo])

HSP 1 Score: 397 bits (1021), Expect = 8.11e-133
Identity = 215/225 (95.56%), Postives = 217/225 (96.44%), Query Frame = 0


Query: 1   MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 60
           MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR
Sbjct: 415 MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 474

Query: 61  RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPAS 120
           RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESG QPTP TK AS
Sbjct: 475 RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGPQPTPVTKAAS 534

Query: 121 VSMVAAAQLQSAS-SVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEE 180
           V MVAAAQLQS S SVGN+DRLKSEKMKVSSSSSHED RIVDGALTKKKTKRKAEVELEE
Sbjct: 535 VLMVAAAQLQSPSMSVGNLDRLKSEKMKVSSSSSHEDTRIVDGALTKKKTKRKAEVELEE 594

Query: 181 THNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS 224
           THNRPEKASTQHGDEKHKSTNKPTAS PPKPNIQSAAPSS+EQSS
Sbjct: 595 THNRPEKASTQHGDEKHKSTNKPTASHPPKPNIQSAAPSSMEQSS 639

[Close]

BLAST of Cucsat.G4258.T16 vs. NCBI nr
Match: XP_008466757.1 (PREDICTED: ubinuclein-1-like isoform X2 [Cucumis melo] >TYJ95740.1 ubinuclein-1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 397 bits (1021), Expect = 2.49e-131
Identity = 215/225 (95.56%), Postives = 217/225 (96.44%), Query Frame = 0


Query: 1   MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 60
           MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR
Sbjct: 538 MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 597

Query: 61  RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPAS 120
           RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESG QPTP TK AS
Sbjct: 598 RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGPQPTPVTKAAS 657

Query: 121 VSMVAAAQLQSAS-SVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEE 180
           V MVAAAQLQS S SVGN+DRLKSEKMKVSSSSSHED RIVDGALTKKKTKRKAEVELEE
Sbjct: 658 VLMVAAAQLQSPSMSVGNLDRLKSEKMKVSSSSSHEDTRIVDGALTKKKTKRKAEVELEE 717

Query: 181 THNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS 224
           THNRPEKASTQHGDEKHKSTNKPTAS PPKPNIQSAAPSS+EQSS
Sbjct: 718 THNRPEKASTQHGDEKHKSTNKPTASHPPKPNIQSAAPSSMEQSS 762

[Close]

BLAST of Cucsat.G4258.T16 vs. ExPASy TrEMBL
Match: A0A0A0KFR0 (HUN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G381790 PE=4 SV=1)

HSP 1 Score: 417 bits (1072), Expect = 2.59e-139
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 60
           MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR
Sbjct: 538 MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 597

Query: 61  RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPAS 120
           RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPAS
Sbjct: 598 RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPAS 657

Query: 121 VSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEET 180
           VSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEET
Sbjct: 658 VSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEET 717

Query: 181 HNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS 224
           HNRPEKAS QHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS
Sbjct: 718 HNRPEKASIQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS 761

[Close]

BLAST of Cucsat.G4258.T16 vs. ExPASy TrEMBL
Match: A0A1S4E5X1 (uncharacterized protein LOC103504093 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103504093 PE=4 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 3.81e-133
Identity = 215/225 (95.56%), Postives = 217/225 (96.44%), Query Frame = 0


Query: 1   MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 60
           MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR
Sbjct: 414 MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 473

Query: 61  RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPAS 120
           RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESG QPTP TK AS
Sbjct: 474 RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGPQPTPVTKAAS 533

Query: 121 VSMVAAAQLQSAS-SVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEE 180
           V MVAAAQLQS S SVGN+DRLKSEKMKVSSSSSHED RIVDGALTKKKTKRKAEVELEE
Sbjct: 534 VLMVAAAQLQSPSMSVGNLDRLKSEKMKVSSSSSHEDTRIVDGALTKKKTKRKAEVELEE 593

Query: 181 THNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS 224
           THNRPEKASTQHGDEKHKSTNKPTAS PPKPNIQSAAPSS+EQSS
Sbjct: 594 THNRPEKASTQHGDEKHKSTNKPTASHPPKPNIQSAAPSSMEQSS 638

[Close]

BLAST of Cucsat.G4258.T16 vs. ExPASy TrEMBL
Match: A0A1S4E5U7 (uncharacterized protein LOC103504093 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103504093 PE=4 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 3.93e-133
Identity = 215/225 (95.56%), Postives = 217/225 (96.44%), Query Frame = 0


Query: 1   MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 60
           MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR
Sbjct: 415 MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 474

Query: 61  RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPAS 120
           RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESG QPTP TK AS
Sbjct: 475 RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGPQPTPVTKAAS 534

Query: 121 VSMVAAAQLQSAS-SVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEE 180
           V MVAAAQLQS S SVGN+DRLKSEKMKVSSSSSHED RIVDGALTKKKTKRKAEVELEE
Sbjct: 535 VLMVAAAQLQSPSMSVGNLDRLKSEKMKVSSSSSHEDTRIVDGALTKKKTKRKAEVELEE 594

Query: 181 THNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS 224
           THNRPEKASTQHGDEKHKSTNKPTAS PPKPNIQSAAPSS+EQSS
Sbjct: 595 THNRPEKASTQHGDEKHKSTNKPTASHPPKPNIQSAAPSSMEQSS 639

[Close]

BLAST of Cucsat.G4258.T16 vs. ExPASy TrEMBL
Match: A0A5D3B6W4 (Ubinuclein-1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold282G00440 PE=4 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 1.21e-131
Identity = 215/225 (95.56%), Postives = 217/225 (96.44%), Query Frame = 0


Query: 1   MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 60
           MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR
Sbjct: 538 MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 597

Query: 61  RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPAS 120
           RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESG QPTP TK AS
Sbjct: 598 RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGPQPTPVTKAAS 657

Query: 121 VSMVAAAQLQSAS-SVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEE 180
           V MVAAAQLQS S SVGN+DRLKSEKMKVSSSSSHED RIVDGALTKKKTKRKAEVELEE
Sbjct: 658 VLMVAAAQLQSPSMSVGNLDRLKSEKMKVSSSSSHEDTRIVDGALTKKKTKRKAEVELEE 717

Query: 181 THNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS 224
           THNRPEKASTQHGDEKHKSTNKPTAS PPKPNIQSAAPSS+EQSS
Sbjct: 718 THNRPEKASTQHGDEKHKSTNKPTASHPPKPNIQSAAPSSMEQSS 762

[Close]

BLAST of Cucsat.G4258.T16 vs. ExPASy TrEMBL
Match: A0A1S3CRZ1 (ubinuclein-1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504093 PE=4 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 1.21e-131
Identity = 215/225 (95.56%), Postives = 217/225 (96.44%), Query Frame = 0


Query: 1   MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 60
           MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR
Sbjct: 538 MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 597

Query: 61  RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATKPAS 120
           RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESG QPTP TK AS
Sbjct: 598 RALHGRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGPQPTPVTKAAS 657

Query: 121 VSMVAAAQLQSAS-SVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVELEE 180
           V MVAAAQLQS S SVGN+DRLKSEKMKVSSSSSHED RIVDGALTKKKTKRKAEVELEE
Sbjct: 658 VLMVAAAQLQSPSMSVGNLDRLKSEKMKVSSSSSHEDTRIVDGALTKKKTKRKAEVELEE 717

Query: 181 THNRPEKASTQHGDEKHKSTNKPTASLPPKPNIQSAAPSSLEQSS 224
           THNRPEKASTQHGDEKHKSTNKPTAS PPKPNIQSAAPSS+EQSS
Sbjct: 718 THNRPEKASTQHGDEKHKSTNKPTASHPPKPNIQSAAPSSMEQSS 762

[Close]

BLAST of Cucsat.G4258.T16 vs. TAIR 10
Match: AT1G21610.1 (wound-responsive family protein )

HSP 1 Score: 109.4 bits (272), Expect = 3.8e-24
Identity = 82/196 (41.84%), Postives = 109/196 (55.61%), Query Frame = 0


Query: 1   MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 60
           MD +LEDK+CDLYD+F+DGLDED GPQ +KLY  LAELWPN  MD  GIK AI RAKERR
Sbjct: 484 MDAALEDKLCDLYDIFIDGLDEDQGPQTKKLYVNLAELWPNRLMDYRGIKHAIFRAKERR 543

Query: 61  RALHG---RHKDQEKIKRK-KILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPAT 120
           +AL+G   +  DQ K+K+  K L PR D T +     V Q Q+     + E  L   P  
Sbjct: 544 KALYGNLAKEMDQTKMKKSMKQLVPRTDCTAQPNTELVVQRQH-----SGEKKLIVDPNA 603

Query: 121 KPASVSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSH--EDARIVDGALTKKKTKRKAE 180
              SV       + S + V   ++ + EK+K  SSS +  E+ R+V     +K     AE
Sbjct: 604 TSTSV-------VTSQTMVDRSNQQQPEKLKGISSSCNPTEETRVV----KRKNEAVMAE 663

Query: 181 VELEETHNRPEKASTQ 191
            ++     +PE   T+
Sbjct: 664 KQVVLALKKPEHPQTR 663

[Close]

BLAST of Cucsat.G4258.T16 vs. TAIR 10
Match: AT1G21610.2 (wound-responsive family protein )

HSP 1 Score: 109.4 bits (272), Expect = 3.8e-24
Identity = 82/196 (41.84%), Postives = 109/196 (55.61%), Query Frame = 0


Query: 1   MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 60
           MD +LEDK+CDLYD+F+DGLDED GPQ +KLY  LAELWPN  MD  GIK AI RAKERR
Sbjct: 483 MDAALEDKLCDLYDIFIDGLDEDQGPQTKKLYVNLAELWPNRLMDYRGIKHAIFRAKERR 542

Query: 61  RALHG---RHKDQEKIKRK-KILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPAT 120
           +AL+G   +  DQ K+K+  K L PR D T +     V Q Q+     + E  L   P  
Sbjct: 543 KALYGNLAKEMDQTKMKKSMKQLVPRTDCTAQPNTELVVQRQH-----SGEKKLIVDPNA 602

Query: 121 KPASVSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSH--EDARIVDGALTKKKTKRKAE 180
              SV       + S + V   ++ + EK+K  SSS +  E+ R+V     +K     AE
Sbjct: 603 TSTSV-------VTSQTMVDRSNQQQPEKLKGISSSCNPTEETRVV----KRKNEAVMAE 662

Query: 181 VELEETHNRPEKASTQ 191
            ++     +PE   T+
Sbjct: 663 KQVVLALKKPEHPQTR 662

[Close]

BLAST of Cucsat.G4258.T16 vs. TAIR 10
Match: AT1G21610.3 (wound-responsive family protein )

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-23
Identity = 82/197 (41.62%), Postives = 108/197 (54.82%), Query Frame = 0


Query: 1   MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 60
           MD +LEDK+CDLYD+F+DGLDED GPQ +KLY  LAELWPN  MD  GIK AI RAKERR
Sbjct: 484 MDAALEDKLCDLYDIFIDGLDEDQGPQTKKLYVNLAELWPNRLMDYRGIKHAIFRAKERR 543

Query: 61  RALHG----RHKDQEKIKRK-KILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPA 120
           +AL+G       DQ K+K+  K L PR D T +     V Q Q+     + E  L   P 
Sbjct: 544 KALYGNLAKEMVDQTKMKKSMKQLVPRTDCTAQPNTELVVQRQH-----SGEKKLIVDPN 603

Query: 121 TKPASVSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSH--EDARIVDGALTKKKTKRKA 180
               SV       + S + V   ++ + EK+K  SSS +  E+ R+V     +K     A
Sbjct: 604 ATSTSV-------VTSQTMVDRSNQQQPEKLKGISSSCNPTEETRVV----KRKNEAVMA 663

Query: 181 EVELEETHNRPEKASTQ 191
           E ++     +PE   T+
Sbjct: 664 EKQVVLALKKPEHPQTR 664

[Close]

BLAST of Cucsat.G4258.T16 vs. TAIR 10
Match: AT1G77310.1 (BEST Arabidopsis thaliana protein match is: wound-responsive family protein (TAIR:AT1G21610.1); Has 493 Blast hits to 482 proteins in 163 species: Archae - 0; Bacteria - 100; Metazoa - 172; Fungi - 66; Plants - 65; Viruses - 7; Other Eukaryotes - 83 (source: NCBI BLink). )

HSP 1 Score: 106.7 bits (265), Expect = 2.5e-23
Identity = 77/189 (40.74%), Postives = 108/189 (57.14%), Query Frame = 0


Query: 1   MDPSLEDKICDLYDLFVDGLDEDAGPQIRKLYAELAELWPNGFMDNHGIKRAICRAKERR 60
           MD +LE+K+CDLYD+FV+G+DE +G QIRKLY++LA+LWPN  +DNH I+RAICR KERR
Sbjct: 499 MDVALEEKLCDLYDVFVEGMDEHSGSQIRKLYSDLAQLWPNSLVDNHEIRRAICREKERR 558

Query: 61  RALH---GRHKDQEKIKRKKILPPRVDETVRNEVGTVAQPQYARERLASESGLQPTPATK 120
           RAL    G+  DQ KI +KK       + V    G +  P          SG++   A+ 
Sbjct: 559 RALEGNIGKEMDQTKITKKK-----QTQLVPKSEG-ITYPD-------KTSGVE-VKASV 618

Query: 121 PASVSMVAAAQLQSASSVGNIDRLKSEKMKVSSSSSHEDARIVDGALTKKKTKRKAEVEL 180
             + +  +    Q A+   + +R K +  K+  +SS     + + A   KK +RK E  L
Sbjct: 619 VLTATTTSLVDCQPAAD-SSFERSKQQHEKLKRTSS-----LSNPAAEGKKVRRKTEPAL 667

Query: 181 EETHNRPEK 187
           EETH   EK
Sbjct: 679 EETHLPAEK 667

The following BLAST results are available for this feature:

BLAST of Cucsat.G4258.T16 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RX78	5.4e-23	41.84	Ubinuclein-1 OS=Arabidopsis thaliana OX=3702 GN=UBN1 PE=1 SV=1	[more]
F4I700	3.5e-22	40.74	Ubinuclein-2 OS=Arabidopsis thaliana OX=3702 GN=UBN2 PE=1 SV=1	[more]

BLAST of Cucsat.G4258.T16 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149441.1	5.35e-139	99.55	ubinuclein-1 isoform X2 [Cucumis sativus] >KGN47689.1 hypothetical protein Csa_0...	[more]
XP_011657419.1	5.49e-139	99.55	ubinuclein-1 isoform X1 [Cucumis sativus]	[more]
XP_016903617.1	7.88e-133	95.56	PREDICTED: uncharacterized protein LOC103504093 isoform X4 [Cucumis melo]	[more]
XP_016903616.1	8.11e-133	95.56	PREDICTED: uncharacterized protein LOC103504093 isoform X3 [Cucumis melo]	[more]
XP_008466757.1	2.49e-131	95.56	PREDICTED: ubinuclein-1-like isoform X2 [Cucumis melo] >TYJ95740.1 ubinuclein-1-...	[more]

BLAST of Cucsat.G4258.T16 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFR0	2.59e-139	99.55	HUN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G381790 PE=4 SV...	[more]
A0A1S4E5X1	3.81e-133	95.56	uncharacterized protein LOC103504093 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E5U7	3.93e-133	95.56	uncharacterized protein LOC103504093 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3B6W4	1.21e-131	95.56	Ubinuclein-1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CRZ1	1.21e-131	95.56	ubinuclein-1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504093 PE=4 SV=1	[more]

BLAST of Cucsat.G4258.T16 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21610.1	3.8e-24	41.84	wound-responsive family protein	[more]
AT1G21610.2	3.8e-24	41.84	wound-responsive family protein	[more]
AT1G21610.3	1.9e-23	41.62	wound-responsive family protein	[more]
AT1G77310.1	2.5e-23	40.74	BEST Arabidopsis thaliana protein match is: wound-responsive family protein (TAI...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..224
None	No IPR available	PANTHER	PTHR21669	CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS	coord: 1..224
None	No IPR available	PANTHER	PTHR21669:SF27	WOUND-RESPONSIVE FAMILY PROTEIN	coord: 1..224

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G4258	Cucsat.G4258	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4258.T16.E1	Cucsat.G4258.T16.E1	exon
Cucsat.G4258.T16.E2	Cucsat.G4258.T16.E2	exon
Cucsat.G4258.T16.E3	Cucsat.G4258.T16.E3	exon
Cucsat.G4258.T16.E4	Cucsat.G4258.T16.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4258.T16.C4	Cucsat.G4258.T16.C4	CDS
Cucsat.G4258.T16.C3	Cucsat.G4258.T16.C3	CDS
Cucsat.G4258.T16.C2	Cucsat.G4258.T16.C2	CDS
Cucsat.G4258.T16.C1	Cucsat.G4258.T16.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G4258.T16	Cucsat.G4258.T16-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006336	DNA replication-independent chromatin assembly
cellular_component	GO:0005634	nucleus