Cucsat.G4173.T11 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AACACAACACACTTTCCAGACTCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCCATTTGCGCCTTTCTTTGAACTTCAACTCAATACTTCTTCTCTTCTCTCTGTTTCAATCTCCTTCCGCTGTGGTATATACTATTTCATTCTTGCATTTCTACTCTTTTCGTTCATGTCTTTGTTTTGTATGTTTCATCAATCGTATCGTCAATTTGTTTGATGATTGGTTTCATTTTGGATTATGTTGTGTTTCGTTCATCCTCGTGGTGCTGTTTTTGTTTAGTGATTGAGGTTTGCGTGTAGGTCGATGGAGCATTTTCAGAACGACGATCTTGAGTATATTGTGGATGATTATTATGAAGTCGATGATTTTGACGACGGTTCTGTTTTATCTGATGATGAATTTCATACTAATAAGAATACGGAGCACGTCGACTCCGACTTTGAGGACGATATTGATACAGTCAGTAATTGTTACTTCTCTGTCAATTAAACTTTTCTTCTGTTGTACTGATAGCCGTTATGAATTGTTTTGATTTTATAGACGACACCGAGGACGGATACCTCTGCTTTGGATTTTAGGAATGGGAAAGATATCCAGGGAATTCCTTGGGAGAGGTTCACCTTTACCAGGGATAATTATCGGGAAAATCGTTTGAGCCAGTACAGGAACTATGAGAGTCTGTCGAGTTCTCGAGCGGAACTGGAAAAGGTGACTTTCCCTACGTTAATTTTCATTACCCTGTATTTTCTGGCGTGTTGCTTAAGTAATTTAAGCTTTAGGCAGAGTGTTTTTGCTTGCAATTAGTAAATTTTGCTTCGAGTTTTGCATTTTTTTCAATCTGTTCGTCTTTGGCAGGAATGCTTGCAAGTGGAGAAGGGGAATAGTTTTTATGATTTCCAGTTCAATACGAGGCTTGTTAAATCAACAATTGTTCATTTTCAGGTATAGACTTTATGAGCCTTTTTTTTTTTATTTAAGATGAGGGTTTGTGTTTCATTTATACGGATTTAAGACCCCGTCCATCCCTCAAGAAGTAATTAGTTATCGTAGAAATCAAGAACCGAACTCCTAAATTAGAAGGGCTGAAATCTACTAAATGGAATTATTTTATTGGACCATCCTACGCATTTACTTTCCCCCAAATTTTTAGAAATTTTCATTTCATCGAATTCATAGTCCATTAATTCAATATTAGATTCATTGTAGGTTTTGTGCACTAGATGCACGTTTCATCACCATATATGATAAATGATTGGTTCTAGTTGGTCATCGTAGACCTCATTTCTTACAAGCTATGCAATTGTCCGAAGTCGTATTTACTAAATCTCTGCGCCTGGTCAAGACACGTTCTTGGTTTACAGTCTCTTGATCATAATATTACAACCATCATTAGCATTGTAGTTTTGCAGGTTTTATATATGTTATTATCCTTTATGGATCTGTTTATAAATGATTCTAGCTCTATGTCCTGATCATACGTTTTGAGGTATGAAGTCCAAAATTCTTTTTATGTTGACTCCATTTTACAACTTGTTCATTTGCGATGAATTAAATTGCCCAATACTAACTAACTTTGAAAAGTCTTTCAGCTAAAAATTATGGTCCCGTGAGGCCACGATTCAGTGCTTGTTCAGGCATGCAATTGCTGATCTAATTTTTGTAATCTGGATGCTTTGTTTACCTGTTAAGCTATAATTATGGATGACGGTGCCCATTTCTCTTACAATTATATAATTTCAATGTAACCTCTGAAATTTTGAAATGCCGCTCTTGATATACTTAGACAGAGTAGAATACTTTTTGTTATTTTATAGATATATGATTGGTGCCTGCTTTGTTTTATGGTTTTGCTACCATATCTTGGACAGTATATAGTTTACTTTTAAAAGCTTATACCGAGGATGCAATCATCAATATGTATCAGACATCATTTACCTAGTACCTTTGATCATCGGAATTACATCCTACTAATGTTAGTTTCTTCCTGAGGATGTTAGTCTTTTTTACCAGAAAGTGCAACCATTTTATTGTTACTTTTAATTTTCTTGGACATACCTTCTTGGTCTGGAGTTCTCTCTTACATATTTCTGAGACAAATGACAACTGGGGAATCCCACGTTTATTTTATTTCTTTGTAATTTTTGTTGCAAATACGTTTTCTCATCAGGGTGTTAAATACAACTTTATCACTTTAACCTATCTGTGGCATTTAGGAATGCTATTTCTGTTTATTTCAGCCTTTAAAGCAGACTGGAAATTATATCTGAGCAGCTGCCAGGACGTTTTTATATGGTACGAGAGGAAAATATATGAACATTTAAGACACCTCTGTAGCAACCTGTGATTCAAGTAGATTTTGGCCTTTTGAGGCTAATTTAATTGAAATCCTCTAATGAAATTTATTCCTGATAATTACTAGATTTTCATCAATTGAATGTGAGTTTTTATTAGTTGACTTTCTTGTGCTTTTTCTCTTATACTCTGTTTTCATGATATTTTATTTGTTAGTTGAATTACGCTTTTGATTGTTATATTTTTTAGAACATGAATAATTATACTTGTCCTGAAGTTGTACCTTGTAATGTGGGTGTGGTCACGGGATTCTTTTCAGTCAACTTTTTCAATTATTTATTTGTTTTCTTTTTTTAGAGTACCTTCTATTTCTTTTATGTCTGTCTACAGAGTAGTCACTGTCAGTTGTCTGCTGGTCTGGGCATTCGTTATGGAGCTTAGTTCTGTGCCTATGTTATTTGCCCTGCATTTTGATAGCCTTATTAGCATTCTCTATTTATCTAATTCTACCTGCTGTACACTCTAAATAGCCCAACTTGTGGTCCCAGTTCAATTCTCTTTTACAGTTTGTGAAGTCTGAAAATCATAAACACCTAAACCCACTTCTTCTTCAGCGAGACTCTCTCACTTTTCCTCATTGCCTTCTTGTTCAAAAATATTTTTCTTTATCTTCTGAGCATTCATATTTGTTCATGCACCTAAATCACATCATTGGAGGATAGAGTTGAAGGTATTACCTTTCAACTGCTGTTGGCGGCAGCTACTTTTGCTTCTGGATTTTATTGCTTACGAGTTTTTTAATTCAAGGGGCACCTTATAATGCACATCCCTAAAGCCAAAATGAAATCATTGCATTTGCATGTTGTGTCATGTGTGTGAGAGACAGTGAAAAGAGAGTGAAATAAGAGAGAGAGAAGAGTGTGAATTTATGTCTTGATTTAAAATATTTAAATGTCGTCTTCTAATGACAATAACTGACTTGTTTGTTCCTACCTTGCAGCTAAGAAATCTCTTGTGGGCAACTTCTAAGCATGATGTATACCTTATGCAAAACTACTCAGTAATGCATTGGTCTTCATTGCTTCGGAGAGGCAAAGAAGTACTCAATGTGGCTAAACCAATTGTTCCCACTTTGGTATGTACATGTACTCATTAAGCTGGCCCAGGGTGCTTAAAGTTTTGTTTTGATAATAAATTAGTTACTTTACTTATAATGGGTCCATCTTGATGATCTCTTGAACAGAAACGCCCTGGACTCTCATCCCAGTCATTGTCCAGAGTGCAGATAAGTACAATGACAGTGAAGGAGAACTTAATCGTGGCAGGTGGTTTTCAAGGAGAACTAATTTGCAAGGTGTGGAGATTTTTATAAGCCATTTACGTATCAATGGGGTTTTCAAATATCTAATTCACTTTTTCCCTCATGGTGCAGTACTTGGATCATCCCGGAGTTGCATTTTGCACCAAAATGACAACAGAAGAAAATGCAATTACAAACGCTGTTGATATATTTCATAATCAAGAGTAAGTTTCATCCCATCAAAGGCGATGGAGTTTCATATTTTGATTGCCTCAGGGCATACAACCTTATGGTGCCCTTTTCTTTTCAGTGGTGCATTGAGGGTCGTCGCAGCAAATAATGATGCAAAAGTTAGGATTTTCGATGCCAAGACTTTCACCTGCCTCAATGGCTTCACCTTCGGCTGGTCTGTGAATGTAAGTGATGCAAACTCAACAACACCACCATATAATGTTTCACAATTGACGATTCATTTATCATATTCTGATTGCTTTACTTCCTTTTCTTAATTTTGGCTCTTGTTTTTACAGAACACTGCTGTTAGTCCAGATGGAAAGATGCTTGCAGTGCTTGGAGACAGCACAGATTGTCTGCTTGCAGATGCCAATTCTGGCAAAGTAAGTATCCTCCAAGCTTTTCTACTGATGCGTGAACACTATATCTTGTCTCGGATATTGTTAAATTTGTAAATGTTGACGGTATTCCATTGGAACAACAGGTGATAGAGAGCCTGAAAGGGCACTTGGATTACTCATTTGCTTCCGCTTGGCACCCTGATGGACGCATATTGGCAACTGGGAACCAAGACAGGACTTGCAGGCTGTGGGACATAAGGAATACATCCAAGTCCTTAGCAGTACTCAAGGGAAGAATGGGAGCAATCAGGTGTGTGAAGTTCAGTTCTGACGGTAAATTCTTGTCGACAGCGGAGCCTGCAGATTTTGTCCATATCTACGAAAGTCACACAGGTTACAAACAAGCACAAGAAATTGATCTGTTTGGTGAAATTGCTGGAATATCCTTTAGTCCCGACACAGAAGCTCTATTCATTGGTGTCGCTGATCGAACCTATGGTAGTGTATTAGAGTTCAACAAACGACATCATAATAAGTACATAGATTCCATCTTCTAGACAAGTGAGAAGAATGGTTAAACAATGGTCCAAAATGAAGCAAAAAGAAGAAGCAGATGCTGCTGACTGATTAATTGATGGAATTTGTATATAAGAAAATAAATATGTATTTGGTTCCTTTTCCAGTTCATGTGTTTAAGTGTTTGAAGTGTTGAATGTAGCAAAGCGAGCAGCAGATTTTGGTTGATGATGATGATGATGGTGATGTCTACAGAAATTGAGAGTAAAGAAGCAGGCACCATAACCATTACAATGTCTCTATTATATGTAATTGTAATTGGATTTTGAAGGTCATCTTCATCAAGGTGGTGGAAAGAGTAGAAAGAAAAAAAAGAGAGGTCTGCCTGAAGTTTTCCTTTTTAGTAAATACTTTGGGTGTTGGGAGTGCTTTGCATCTTTTGACCTCGTTCCTGTTGTTGCTGTCTTGTGTGTCATGTTGGGCGTTGGAATGAATATGGTCAGTCCATTTTGAACAGATTGGTTCCATTCATTTCATTCCTTATATATATATATATATTTATTTCAATTTGTATAGAATATTTTCAAATGGTCTTTTCCTTTCTCTTATCTGACTTGATATTTCTTTCCCTGTTGGAGGAAATTCATTATGTAGATAGGCTATTTGTTTCTAGTGTTCGCTTGTTTGGCTTGAGAAGTCTCAAGGATTTAGTTTGACAACAAGCTTGAGAAGTGTAAGGATTTATTCTGAGAAGTTTGAATGTAATTAGATTACTATAAAGATTGGATTAAAAACCTAGGTCGTTGATTATATTACAATTTTTTCTTGTATCGATGG ATGGTGCAGTACTTGGATCATCCCGGAGTTGCATTTTGCACCAAAATGACAACAGAAGAAAATGCAATTACAAACGCTGTTGATATATTTCATAATCAAGATGGTGCATTGAGGGTCGTCGCAGCAAATAATGATGCAAAAGTTAGGATTTTCGATGCCAAGACTTTCACCTGCCTCAATGGCTTCACCTTCGGCTGGTCTGTGAATAACACTGCTGTTAGTCCAGATGGAAAGATGCTTGCAGTGCTTGGAGACAGCACAGATTGTCTGCTTGCAGATGCCAATTCTGGCAAAGTGATAGAGAGCCTGAAAGGGCACTTGGATTACTCATTTGCTTCCGCTTGGCACCCTGATGGACGCATATTGGCAACTGGGAACCAAGACAGGACTTGCAGGCTGTGGGACATAAGGAATACATCCAAGTCCTTAGCAGTACTCAAGGGAAGAATGGGAGCAATCAGGTGTGTGAAGTTCAGTTCTGACGGTAAATTCTTGTCGACAGCGGAGCCTGCAGATTTTGTCCATATCTACGAAAGTCACACAGGTTACAAACAAGCACAAGAAATTGATCTGTTTGGTGAAATTGCTGGAATATCCTTTAGTCCCGACACAGAAGCTCTATTCATTGGTGTCGCTGATCGAACCTATGGTAGTGTATTAGAGTTCAACAAACGACATCATAATAAGTACATAGATTCCATCTTCTAG MVQYLDHPGVAFCTKMTTEENAITNAVDIFHNQDGALRVVAANNDAKVRIFDAKTFTCLNGFTFGWSVNNTAVSPDGKMLAVLGDSTDCLLADANSGKVIESLKGHLDYSFASAWHPDGRILATGNQDRTCRLWDIRNTSKSLAVLKGRMGAIRCVKFSSDGKFLSTAEPADFVHIYESHTGYKQAQEIDLFGEIAGISFSPDTEALFIGVADRTYGSVLEFNKRHHNKYIDSIF Homology
BLAST of Cucsat.G4173.T11 vs. ExPASy Swiss-Prot
Match: Q9Y7K5 (Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC2A9.03 PE=4 SV=2) HSP 1 Score: 121.3 bits (303), Expect = 1.4e-26 Identity = 71/214 (33.18%), Postives = 113/214 (52.80%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. ExPASy Swiss-Prot
Match: Q8YTC2 (Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=alr2800 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.4e-18 Identity = 57/188 (30.32%), Postives = 90/188 (47.87%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. ExPASy Swiss-Prot
Match: P49695 (Probable serine/threonine-protein kinase PkwA OS=Thermomonospora curvata OX=2020 GN=pkwA PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.5e-15 Identity = 66/195 (33.85%), Postives = 95/195 (48.72%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. ExPASy Swiss-Prot
Match: Q8YV57 (Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=all2124 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 3.3e-15 Identity = 65/238 (27.31%), Postives = 101/238 (42.44%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. ExPASy Swiss-Prot
Match: Q00808 (Vegetative incompatibility protein HET-E-1 OS=Podospora anserina OX=2587412 GN=HET-E1 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 5.7e-15 Identity = 52/179 (29.05%), Postives = 94/179 (52.51%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. NCBI nr
Match: XP_031736635.1 (uncharacterized WD repeat-containing protein C2A9.03 isoform X2 [Cucumis sativus] >XP_031736636.1 uncharacterized WD repeat-containing protein C2A9.03 isoform X2 [Cucumis sativus]) HSP 1 Score: 479 bits (1232), Expect = 2.73e-169 Identity = 232/233 (99.57%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. NCBI nr
Match: XP_011649409.1 (uncharacterized WD repeat-containing protein C2A9.03 isoform X1 [Cucumis sativus] >KAE8652930.1 hypothetical protein Csa_017762 [Cucumis sativus]) HSP 1 Score: 479 bits (1232), Expect = 3.33e-167 Identity = 232/233 (99.57%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. NCBI nr
Match: XP_008445349.1 (PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Cucumis melo] >XP_008445350.1 PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Cucumis melo] >KAA0064826.1 putative WD repeat-containing protein C2A9.03-like [Cucumis melo var. makuwa]) HSP 1 Score: 472 bits (1215), Expect = 1.28e-164 Identity = 229/233 (98.28%), Postives = 231/233 (99.14%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. NCBI nr
Match: XP_038884444.1 (uncharacterized WD repeat-containing protein C2A9.03-like isoform X2 [Benincasa hispida] >XP_038884445.1 uncharacterized WD repeat-containing protein C2A9.03-like isoform X2 [Benincasa hispida] >XP_038884446.1 uncharacterized WD repeat-containing protein C2A9.03-like isoform X2 [Benincasa hispida] >XP_038884448.1 uncharacterized WD repeat-containing protein C2A9.03-like isoform X2 [Benincasa hispida] >XP_038884449.1 uncharacterized WD repeat-containing protein C2A9.03-like isoform X2 [Benincasa hispida]) HSP 1 Score: 453 bits (1165), Expect = 4.40e-159 Identity = 217/233 (93.13%), Postives = 226/233 (97.00%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. NCBI nr
Match: XP_038884443.1 (uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 [Benincasa hispida]) HSP 1 Score: 453 bits (1165), Expect = 4.91e-157 Identity = 217/233 (93.13%), Postives = 226/233 (97.00%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. ExPASy TrEMBL
Match: A0A0A0LN09 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G308350 PE=4 SV=1) HSP 1 Score: 479 bits (1232), Expect = 1.61e-167 Identity = 232/233 (99.57%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. ExPASy TrEMBL
Match: A0A1S3BCG7 (uncharacterized WD repeat-containing protein C2A9.03-like OS=Cucumis melo OX=3656 GN=LOC103488408 PE=4 SV=1) HSP 1 Score: 472 bits (1215), Expect = 6.19e-165 Identity = 229/233 (98.28%), Postives = 231/233 (99.14%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. ExPASy TrEMBL
Match: A0A5A7VES3 (Putative WD repeat-containing protein C2A9.03-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001380 PE=4 SV=1) HSP 1 Score: 472 bits (1215), Expect = 6.19e-165 Identity = 229/233 (98.28%), Postives = 231/233 (99.14%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. ExPASy TrEMBL
Match: A0A6J1GHV6 (uncharacterized WD repeat-containing protein C2A9.03-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111454306 PE=4 SV=1) HSP 1 Score: 444 bits (1142), Expect = 6.78e-156 Identity = 210/233 (90.13%), Postives = 223/233 (95.71%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. ExPASy TrEMBL
Match: A0A6J1BPR0 (uncharacterized WD repeat-containing protein C2A9.03-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111004654 PE=4 SV=1) HSP 1 Score: 444 bits (1141), Expect = 9.63e-156 Identity = 212/233 (90.99%), Postives = 224/233 (96.14%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. TAIR 10
Match: AT1G78070.1 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 347.4 bits (890), Expect = 8.8e-96 Identity = 158/231 (68.40%), Postives = 195/231 (84.42%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. TAIR 10
Match: AT1G36070.1 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 345.9 bits (886), Expect = 2.6e-95 Identity = 155/231 (67.10%), Postives = 201/231 (87.01%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. TAIR 10
Match: AT1G36070.2 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 345.9 bits (886), Expect = 2.6e-95 Identity = 155/231 (67.10%), Postives = 201/231 (87.01%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. TAIR 10
Match: AT1G55680.1 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 312.8 bits (800), Expect = 2.4e-85 Identity = 136/231 (58.87%), Postives = 187/231 (80.95%), Query Frame = 0
BLAST of Cucsat.G4173.T11 vs. TAIR 10
Match: AT3G13340.1 (Transducin/WD40 repeat-like superfamily protein ) HSP 1 Score: 309.7 bits (792), Expect = 2.0e-84 Identity = 136/231 (58.87%), Postives = 185/231 (80.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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