Cucsat.G3986.T1 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G3986.T1
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionperoxisomal membrane protein PMP22
Locationctg105: 1504318 .. 1507745 (-)
RNA-Seq ExpressionCucsat.G3986.T1
SyntenyCucsat.G3986.T1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGGAAAATTTTGGAAATTTCAGTCTCAAAAATATTTTTGAGGAATAATTTGATTTGGTTTTGGCGAATGCGTTCCGTCTCGGTCTGCCGGCGTCCGATGATCAGCCCCAAAATCCCTTTCAACGATCAAAGTCAAACATCCCCTTTTTCTATTTAAATCTCGTTAATTCTTATGCTTATTCTTCAAGCCCTCATCTCCAATTTTAACTTTCTTCCCTTTTATTCTTTCGATCTGTGAAAGCCACATCTCAAGTTTCTTCTCTCTTCACAAATCTCCATTATGTCCTCTATAGTCACTGAAGCTTGGCAAGGATATCTCCTGCAACTTCAGAAGAATCCTCTTAGAACTAAGGTCAGTTTCATCATTACTCTCAATCAGTTTGATTAAACTTGTTTTAAGGGTCCGTTTAACTTTGTTTTCAGGCTATTACTGCTGGGGTTTTAGCTGGGATTAGTGACTCTGTGGCTCAGAAGATTTCTGGGATCAAGAAACTTCAGTTTAGACGATTGCTTCTTTTGATGGTACTTTTTATTTTGTTGTTTTTATTTTGCTGTGATCGAAACAGAGGATAGCGTTTTAGATGGGTTTTGGTTTGTAGCTCTATGGCTTTGCTTATGCTGGACCGTTTGGGCATTTTTTGCACAAATTGATGGATAGAATTTTCAAGGGAAAGAAAGGAAATACAACTGTTGCAAAGAAGGTTCATATCTCCTTTTCTACTTTGGAGTTTTTTTGTACTAACTCTTTAATCGTTCTTTGCAATCTTGTTAGGTGTTTTTTTTTTTTTTTTCTGTAGTTGTATTGATGGATGGATGTGTTATATATTTTGTTAGGTGTTATTGGAACAAGTGACTAGCTCTCCTTGGAATAATTTATTTTTCATGATGTATTATGGATTGGTAGTAGAAGGTAATCGAATTTGCAATTACTCCCTGTCTTTTTTTTTTTGTCAACTTCAACTTCGAATGTTGATTATCTCTTACTATTTCTCAAAAGTGTACTGGTTTTCTGTGTTTTCTTTACCATAGTTTTCATCTTTGTCGAGGAATCATACGAGTTCCTAGTCAAAATTTGAAAAACAAAAGCTTTTAGGCCACTTTTGATAACCATTGTTTTTTGGTTTTTTTGTACGTTTCTAAATTTCTTGGTTTGTTATTACTTTTTTTTTTAAAATTAAGGTTTTAAAAAACAAAGCCAAATAAAATAAGTTTTTAAAAAACTTGTTTTTTTGTTTTAAAATATGACTAAGAATTCAATTTAAGAAAGATGGAAATCATTATATGAAATCGGGAGGAAACAACAAACTTAATTTTTAGAACCCAAAAACTAAAGACAACACTGTAACCAAAAGAGGCGTAGTTTCCAAAAACAGAAAACAAAAGAGAATAGAAGTCTAATATATCTTTAAGAAATATGAACACCATAACCATACTAAAGAATAGCAAGTAAATAAGTATTAACTTCAAAAACAGAAAATTATTATTATTTCTGAAAGTAGTTGTTTTATTTGAGCAAAATTAATAGTGTTCATGCATGTTATGTTGACTAAAACGGTGACAATTTTGTTGAATGAACACATTGACCCAAAAATTTATAATTTCAGGAAGACCATGGAGTTTAGTCAAGGCTAAAGTTCGAAAGGACTACCCAACTATTCAGTTGACTGCTTGGCGGGTATATACTCTTTTATAAGTCTAATTTCCTTTAAACAACTTTGTAAACTTGGCTTTTTCCTGTTTTATTTAGTTTTGTATTGCTGTTATAAATGAAGAAAGCCCCTAGTAAATTAGATAATAACAATAAAATGGTTATGCTTATGATTTGCAGTTCTGGCCTATAGTTGGTTGGGTGAATTACCAATACATGCCTATCCAATTTCGAGTGATATTTCACAGCTTTGTTGCTTCATGCTGGTGAGACCATTCATCTTTTCTTCTTTTAATTTACAGGAAAAAAAGGAGTCAATGTTCTTGAATTTTAGGGGATAGAAATATATTGTCATGTGCAATATAAGTCTTCTTGTATAGAAGTGAGATCTGTTGCCTATAAAGAAAGTGATCAAAGGTGAAAAGGAAAAATATTGACAGAATATTTACCTATAATGATATAAATATTCTTAAATAATAGAAATTCCTTTCCTTAGTATCACATGATAGGTTACTTGTATTATGTCCTTTCACCAGAATCAGAGAAGAAAACTGGTGTGCTGACATTGTTTTGTACTAACTTTCAACTACTTGACAGTCTTGTCAATTCTATGATCTTCTGTAATTTTGAAGTTTGTGATAGGAATGGTATTAGAGGGATATTAAGGGATTATTGATAAATAGTTAAAGTAGTTTGTTAGGGAAGTTTGTCTCACGATTCTACTTCCTGCAAGTATAAAATCCCAACAAGAATACAAATATCCAAGAAATTCACAAGGCAAACACCCGTATGATCGAATATTTACTTCAAGGACAATCCACTGATACAAAATCATGATAATAACTAGAACACGTAAAGATAGATGAACAAACTCTTCTACGGTCTAAAGGGCTCATAATCCTCTCCTAATAGCCAAACACTCTTCTAAATTCTTCACACCTATAGCCATACTCTCTCCTACTATTTATAACTAAAAAACCTAACAAAGTTCAGTCTATTTACTAGAATGCTCCTTACTACTAATCATACTAATTATCCAAATATATTCCTGACTAGGAGCCTTACAGTTTGGTTCAGTGGGTAGGGAAGAAGAAATGGGTAAGCAATATTTATGTGAGTGAAATAGAGCTTAAGATTCATTTCAAGATTGGAAAAGTCCACATATCTCGAATACTTGGGTTTATCTTGTATTTCTGTTATCTTTTATAATTCAATATATTTGGTTCCGATCAGTTTATCATTGTTTCAAAATAAAATACTCCTGTTTTCTTAAAAGAAAATTGCAGTACCAATTTGAGGTTGGATCTTTAGTGGTATTTAAGAAACAATAGACAAAAAGATTTTGATATTATGTTGCTGTTACCAAATTTGAGGCAAAGTATTGTGTTTCTTGTGGTTTCAGGGGAATCTTTCTGAATCTGAAAGCAAGATCAGTGAAGGCAGCATAAATTGGTTGAAGTTAAAGCCTTTTCTTTACTTTGGTAACTGTAGAATAGAATCCATTAGCTTTTGATTTAAGTTAAGCTGTAACTGCTCATGTTCTGTTTTGATTGTCACACAAATGAATAATAATACAAGGGTAGGTACAGAATAAACTAAATTAATCCACAAATCAAGTGTGTCTAATTTTTGTTTATTTATTTATCTCTATTCCTTTTTCATCCTACCTACCCTCCCACTTCCCTCCTTAGTCCTTGGTTGGGGTTGGGAGCACTTCCACATGGGATGTTTTGTGATGATATTATATAGTTAGGTCTGAAATTCAAACAGTTTTTAATTA

Coding sequence (CDS)

ATGTCCTCTATAGTCACTGAAGCTTGGCAAGGATATCTCCTGCAACTTCAGAAGAATCCTCTTAGAACTAAGGCTATTACTGCTGGGGTTTTAGCTGGGATTAGTGACTCTGTGGCTCAGAAGATTTCTGGGATCAAGAAACTTCAGTTTAGACGATTGCTTCTTTTGATGCTCTATGGCTTTGCTTATGCTGGACCGTTTGGGCATTTTTTGCACAAATTGATGGATAGAATTTTCAAGGGAAAGAAAGGAAATACAACTGTTGCAAAGAAGGTGTTATTGGAACAAGTGACTAGCTCTCCTTGGAATAATTTATTTTTCATGATGTATTATGGATTGGTAGTAGAAGGAAGACCATGGAGTTTAGTCAAGGCTAAAGTTCGAAAGGACTACCCAACTATTCAGTTGACTGCTTGGCGGTTCTGGCCTATAGTTGGTTGGGTGAATTACCAATACATGCCTATCCAATTTCGAGTGATATTTCACAGCTTTGTTGCTTCATGCTGGGGAATCTTTCTGAATCTGAAAGCAAGATCAGTGAAGGCAGCATAA

Protein sequence

MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYGFAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPWSLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSVKAA
Homology
[Close]
BLAST of Cucsat.G3986.T1 vs. ExPASy Swiss-Prot
Match: Q9ZS51 (Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana OX=3702 GN=PMP22 PE=1 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 5.3e-61
Identity = 106/174 (60.92%), Postives = 141/174 (81.03%), Query Frame = 0 

Query: 10  QGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYGFAYAGPFGH 69
           Q YL QLQ++PLRTKAITAGVL+G+SD V+QK+SGI+K+Q RR+LL +++   + GP GH
Sbjct: 12  QRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLGPAGH 71

Query: 70  FLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPWSLVKAKVRK 129
           F H  +D+ FKGKK   TVAKKV+LEQ+T SP N+L FM+YYG+V+E  PW+LV+ +++K
Sbjct: 72  FFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRERIKK 131

Query: 130 DYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSVKAA 184
            YPT+QLTAW F+P+VGW+NY+Y+P+ FRVI HS VA  WGIFL L+ARS+  A
Sbjct: 132 TYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTLRARSMTLA 185

[Close]
BLAST of Cucsat.G3986.T1 vs. ExPASy Swiss-Prot
Match: Q54GD8 (PXMP2/4 family protein 3 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290223 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.0e-21
Identity = 50/166 (30.12%), Postives = 99/166 (59.64%), Query Frame = 0 

Query: 12  YLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYGFAYAGPFGHFL 71
           Y+ +L+  P++TKA+T+  L+ IS  VAQK    KK+ +  ++   ++G   + P  H+ 
Sbjct: 17  YMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWGL-ISSPLVHYW 76

Query: 72  HKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPWSLVKAKVRKDY 131
           H ++DR+FK  K       K++++Q+  +P+ N+ F      +++G+P S++       +
Sbjct: 77  HIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAFYSVLA-ILDGKPKSILFKLYFDLF 136

Query: 132 PTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKA 178
           PT++  +W+ WP+   +N++++P   RV+F + V  CWGI+L++ A
Sbjct: 137 PTLK-ASWKVWPLAQLINFRFVPSHLRVLFGNLVGFCWGIYLSILA 179

[Close]
BLAST of Cucsat.G3986.T1 vs. ExPASy Swiss-Prot
Match: Q54FR4 (PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 59/166 (35.54%), Postives = 88/166 (53.01%), Query Frame = 0 

Query: 12  YLLQLQKNPLRTKAITAGVLAGISDSVAQKI----SGIKKLQFRRLLLLMLYGFAYAGPF 71
           YL QL K P+ TKA+T+G L  ISDS+ Q I       KK  F+R + + ++GFA  GP 
Sbjct: 15  YLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGFAVTGPL 74

Query: 72  GHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPWSLVKAKV 131
            H+  K +D+ F  KK       K+ ++QV  SP  N  F    G ++EG+    +  K+
Sbjct: 75  FHYWFKYLDKHFP-KKSYRHAFIKLTIDQVVCSPVFNFLFFSGMG-ILEGKSKDDIVEKL 134

Query: 132 RKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFL 174
           +KD+ T  ++    WP + +VN+ Y+    RV F +     WG FL
Sbjct: 135 KKDWLTTYVSDCVVWPFINFVNFAYISSIHRVTFMNVCNIGWGAFL 178

[Close]
BLAST of Cucsat.G3986.T1 vs. ExPASy Swiss-Prot
Match: Q2KIY1 (Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3)

HSP 1 Score: 85.9 bits (211), Expect = 5.2e-16
Identity = 56/171 (32.75%), Postives = 97/171 (56.73%), Query Frame = 0 

Query: 12  YLLQLQKNPLRTKAITAGVLAGISDSVAQ-------KISGIKKLQFRRLLLLMLYGFAYA 71
           YL  L+  P+ TKA T+G+L+ + + +AQ       K +  +KL     L   +YGF + 
Sbjct: 25  YLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGPLRYAIYGFFFT 84

Query: 72  GPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSP-WNNLFFMMYYGLVVEGRPWSLV 131
           GP GHF + LM+R    +     + K++LL+++  +P + +LFF++   L  EG+  +  
Sbjct: 85  GPLGHFFYLLMERWIPSEVPLAGI-KRLLLDRLLFAPAFLSLFFLVMNFL--EGQDTAAF 144

Query: 132 KAKVRKDY-PTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFL 174
            AK++  + P +++  WR W  V ++N  Y+P+QFRV+F + VA  W  +L
Sbjct: 145 AAKMKSGFWPALRMN-WRVWTPVQFININYIPVQFRVLFANLVALFWYAYL 191

[Close]
BLAST of Cucsat.G3986.T1 vs. ExPASy Swiss-Prot
Match: P42925 (Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 5.2e-16
Identity = 55/179 (30.73%), Postives = 98/179 (54.75%), Query Frame = 0 

Query: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKK-----LQFRRLLL 60
           + S+   A   YLL L+  P+ TKA+++G+L+ + + +AQ I   ++     L+   LL 
Sbjct: 14  LGSLPKRALAQYLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLR 73

Query: 61  LMLYGFAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVV 120
            ++YG    GP  H+L+  M+     +    +V K++LL+++  +P   L F     L +
Sbjct: 74  YLVYGLFVTGPLSHYLYLFMEYSVPPEVPWASV-KRLLLDRLFFAPTFLLLFFFVMNL-L 133

Query: 121 EGRPWSLVKAKVRKDY-PTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFL 174
           EG+  S+  AK+R  + P +Q+  WR W  + ++N  Y+P+QFRV+F +  A  W  +L
Sbjct: 134 EGKNVSVFVAKMRSGFWPALQMN-WRMWTPLQFININYVPLQFRVLFANMAALFWYAYL 189

[Close]
BLAST of Cucsat.G3986.T1 vs. NCBI nr
Match: XP_004147155.1 (peroxisomal membrane protein PMP22 [Cucumis sativus] >KGN61586.1 hypothetical protein Csa_006161 [Cucumis sativus])

HSP 1 Score: 375 bits (964), Expect = 2.02e-131
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0 

Query: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120
           FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120

Query: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV 180
           SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV 180

Query: 181 KAA 183
           KAA
Sbjct: 181 KAA 183

[Close]
BLAST of Cucsat.G3986.T1 vs. NCBI nr
Match: XP_008460659.1 (PREDICTED: peroxisomal membrane protein PMP22 [Cucumis melo] >KAA0050714.1 peroxisomal membrane protein PMP22 [Cucumis melo var. makuwa] >TYK01447.1 peroxisomal membrane protein PMP22 [Cucumis melo var. makuwa])

HSP 1 Score: 370 bits (950), Expect = 2.76e-129
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 0 

Query: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120
           FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQ+TSSPWNNLFFMMYYGLVVEGR W
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQLTSSPWNNLFFMMYYGLVVEGRRW 120

Query: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV 180
           SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMP+QFRVIFHSFVASCWGIFLNLKARSV
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSV 180

Query: 181 KAA 183
           KAA
Sbjct: 181 KAA 183

[Close]
BLAST of Cucsat.G3986.T1 vs. NCBI nr
Match: XP_038906760.1 (peroxisomal membrane protein PMP22 [Benincasa hispida])

HSP 1 Score: 362 bits (929), Expect = 4.73e-126
Identity = 173/180 (96.11%), Postives = 179/180 (99.44%), Query Frame = 0 

Query: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVT+AW+GYLLQLQK+PLRTKAITAGVLAG+SDSVAQKISGIKKLQFRRLLLLMLYG
Sbjct: 1   MSSIVTDAWKGYLLQLQKHPLRTKAITAGVLAGVSDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120
           FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQ+TSSPWNNLFFMMYYGLVVEGRPW
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQLTSSPWNNLFFMMYYGLVVEGRPW 120

Query: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV 180
           SLVK KVRKDYPTIQLTAWRFWPIVGWVNYQYMP+QFRVIFHSFVASCWGIFLNLKARSV
Sbjct: 121 SLVKTKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSV 180

[Close]
BLAST of Cucsat.G3986.T1 vs. NCBI nr
Match: XP_023006319.1 (peroxisomal membrane protein PMP22 [Cucurbita maxima])

HSP 1 Score: 357 bits (916), Expect = 4.54e-124
Identity = 170/180 (94.44%), Postives = 178/180 (98.89%), Query Frame = 0 

Query: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVT+AW+GYLLQLQKNPLRTKAITAGVLAG SD+VAQKISGIKKLQ RRLLLLMLYG
Sbjct: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGCSDTVAQKISGIKKLQIRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120
           FAYAGPFGHFLHKLMD+IFKGKKGNTTVAKKV+LEQ+TSSPWNNLFFM+YYGLVVEGRPW
Sbjct: 61  FAYAGPFGHFLHKLMDKIFKGKKGNTTVAKKVILEQLTSSPWNNLFFMIYYGLVVEGRPW 120

Query: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV 180
           SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMP+QFRVIFHSFVASCWGIFLNLKARSV
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSV 180

[Close]
BLAST of Cucsat.G3986.T1 vs. NCBI nr
Match: XP_022959090.1 (peroxisomal membrane protein PMP22 [Cucurbita moschata] >XP_023547635.1 peroxisomal membrane protein PMP22 [Cucurbita pepo subsp. pepo] >KAG6574905.1 Peroxisomal membrane protein PMP22, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013476.1 Peroxisomal membrane protein PMP22 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 356 bits (913), Expect = 1.30e-123
Identity = 169/180 (93.89%), Postives = 178/180 (98.89%), Query Frame = 0 

Query: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVT+AW+GYLLQLQKNPLRTKAITAGVLAG SD+VAQKISGIKKLQ RRLLL+MLYG
Sbjct: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGCSDTVAQKISGIKKLQIRRLLLVMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120
           FAYAGPFGHFLHKLMD+IFKGKKGNTTVAKKV+LEQ+TSSPWNNLFFM+YYGLVVEGRPW
Sbjct: 61  FAYAGPFGHFLHKLMDKIFKGKKGNTTVAKKVILEQLTSSPWNNLFFMIYYGLVVEGRPW 120

Query: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV 180
           SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMP+QFRVIFHSFVASCWGIFLNLKARSV
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSV 180

[Close]
BLAST of Cucsat.G3986.T1 vs. ExPASy TrEMBL
Match: A0A0A0LNM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173050 PE=3 SV=1)

HSP 1 Score: 375 bits (964), Expect = 9.80e-132
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0 

Query: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120
           FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120

Query: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV 180
           SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV 180

Query: 181 KAA 183
           KAA
Sbjct: 181 KAA 183

[Close]
BLAST of Cucsat.G3986.T1 vs. ExPASy TrEMBL
Match: A0A5D3BQ13 (Peroxisomal membrane protein PMP22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00350 PE=3 SV=1)

HSP 1 Score: 370 bits (950), Expect = 1.34e-129
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 0 

Query: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120
           FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQ+TSSPWNNLFFMMYYGLVVEGR W
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQLTSSPWNNLFFMMYYGLVVEGRRW 120

Query: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV 180
           SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMP+QFRVIFHSFVASCWGIFLNLKARSV
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSV 180

Query: 181 KAA 183
           KAA
Sbjct: 181 KAA 183

[Close]
BLAST of Cucsat.G3986.T1 vs. ExPASy TrEMBL
Match: A0A1S3CDE7 (peroxisomal membrane protein PMP22 OS=Cucumis melo OX=3656 GN=LOC103499432 PE=3 SV=1)

HSP 1 Score: 370 bits (950), Expect = 1.34e-129
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 0 

Query: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG
Sbjct: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120
           FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQ+TSSPWNNLFFMMYYGLVVEGR W
Sbjct: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQLTSSPWNNLFFMMYYGLVVEGRRW 120

Query: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV 180
           SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMP+QFRVIFHSFVASCWGIFLNLKARSV
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSV 180

Query: 181 KAA 183
           KAA
Sbjct: 181 KAA 183

[Close]
BLAST of Cucsat.G3986.T1 vs. ExPASy TrEMBL
Match: A0A6J1L1V0 (peroxisomal membrane protein PMP22 OS=Cucurbita maxima OX=3661 GN=LOC111499089 PE=3 SV=1)

HSP 1 Score: 357 bits (916), Expect = 2.20e-124
Identity = 170/180 (94.44%), Postives = 178/180 (98.89%), Query Frame = 0 

Query: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVT+AW+GYLLQLQKNPLRTKAITAGVLAG SD+VAQKISGIKKLQ RRLLLLMLYG
Sbjct: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGCSDTVAQKISGIKKLQIRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120
           FAYAGPFGHFLHKLMD+IFKGKKGNTTVAKKV+LEQ+TSSPWNNLFFM+YYGLVVEGRPW
Sbjct: 61  FAYAGPFGHFLHKLMDKIFKGKKGNTTVAKKVILEQLTSSPWNNLFFMIYYGLVVEGRPW 120

Query: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV 180
           SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMP+QFRVIFHSFVASCWGIFLNLKARSV
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSV 180

[Close]
BLAST of Cucsat.G3986.T1 vs. ExPASy TrEMBL
Match: A0A6J1H5B2 (peroxisomal membrane protein PMP22 OS=Cucurbita moschata OX=3662 GN=LOC111460189 PE=3 SV=1)

HSP 1 Score: 356 bits (913), Expect = 6.30e-124
Identity = 169/180 (93.89%), Postives = 178/180 (98.89%), Query Frame = 0 

Query: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60
           MSSIVT+AW+GYLLQLQKNPLRTKAITAGVLAG SD+VAQKISGIKKLQ RRLLL+MLYG
Sbjct: 1   MSSIVTDAWKGYLLQLQKNPLRTKAITAGVLAGCSDTVAQKISGIKKLQIRRLLLVMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120
           FAYAGPFGHFLHKLMD+IFKGKKGNTTVAKKV+LEQ+TSSPWNNLFFM+YYGLVVEGRPW
Sbjct: 61  FAYAGPFGHFLHKLMDKIFKGKKGNTTVAKKVILEQLTSSPWNNLFFMIYYGLVVEGRPW 120

Query: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV 180
           SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMP+QFRVIFHSFVASCWGIFLNLKARSV
Sbjct: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSV 180

[Close]
BLAST of Cucsat.G3986.T1 vs. TAIR 10
Match: AT4G14305.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 314.7 bits (805), Expect = 4.9e-86
Identity = 145/179 (81.01%), Postives = 162/179 (90.50%), Query Frame = 0 

Query: 1   MSSIVTEAWQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYG 60
           MS +  +AW+ YL+QLQ +PLRTKAITAGVLAG SD++AQKISG+K++QFRRLLLLMLYG
Sbjct: 1   MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLAGCSDAIAQKISGVKRIQFRRLLLLMLYG 60

Query: 61  FAYAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPW 120
           FAY GPFGHF HKLMD IFKGKKGN+TVAKKVLLEQ+TSSPWNN  FM YYGLVVEGRPW
Sbjct: 61  FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPW 120

Query: 121 SLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARS 180
            LVK K+ KDYPTIQLTAW+FWPIVGWVNYQY+P+QFRV+F SFVASCW IFLNLKARS
Sbjct: 121 KLVKHKLGKDYPTIQLTAWKFWPIVGWVNYQYVPLQFRVLFSSFVASCWSIFLNLKARS 179

[Close]
BLAST of Cucsat.G3986.T1 vs. TAIR 10
Match: AT4G14305.2 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 276.9 bits (707), Expect = 1.1e-74
Identity = 127/151 (84.11%), Postives = 139/151 (92.05%), Query Frame = 0 

Query: 29  GVLAGISDSVAQKISGIKKLQFRRLLLLMLYGFAYAGPFGHFLHKLMDRIFKGKKGNTTV 88
           GVLAG SD++AQKISG+K++QFRRLLLLMLYGFAY GPFGHF HKLMD IFKGKKGN+TV
Sbjct: 17  GVLAGCSDAIAQKISGVKRIQFRRLLLLMLYGFAYGGPFGHFFHKLMDTIFKGKKGNSTV 76

Query: 89  AKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPWSLVKAKVRKDYPTIQLTAWRFWPIVGWV 148
           AKKVLLEQ+TSSPWNN  FM YYGLVVEGRPW LVK K+ KDYPTIQLTAW+FWPIVGWV
Sbjct: 77  AKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPWKLVKHKLGKDYPTIQLTAWKFWPIVGWV 136

Query: 149 NYQYMPIQFRVIFHSFVASCWGIFLNLKARS 180
           NYQY+P+QFRV+F SFVASCW IFLNLKARS
Sbjct: 137 NYQYVPLQFRVLFSSFVASCWSIFLNLKARS 167

[Close]
BLAST of Cucsat.G3986.T1 vs. TAIR 10
Match: AT4G04470.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 235.3 bits (599), Expect = 3.8e-62
Identity = 106/174 (60.92%), Postives = 141/174 (81.03%), Query Frame = 0 

Query: 10  QGYLLQLQKNPLRTKAITAGVLAGISDSVAQKISGIKKLQFRRLLLLMLYGFAYAGPFGH 69
           Q YL QLQ++PLRTKAITAGVL+G+SD V+QK+SGI+K+Q RR+LL +++   + GP GH
Sbjct: 12  QRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLGPAGH 71

Query: 70  FLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVVEGRPWSLVKAKVRK 129
           F H  +D+ FKGKK   TVAKKV+LEQ+T SP N+L FM+YYG+V+E  PW+LV+ +++K
Sbjct: 72  FFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRERIKK 131

Query: 130 DYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSVKAA 184
            YPT+QLTAW F+P+VGW+NY+Y+P+ FRVI HS VA  WGIFL L+ARS+  A
Sbjct: 132 TYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTLRARSMTLA 185

[Close]
BLAST of Cucsat.G3986.T1 vs. TAIR 10
Match: AT3G24570.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12
Identity = 51/211 (24.17%), Postives = 95/211 (45.02%), Query Frame = 0 

Query: 9   WQGYLLQLQKNPLRTKAITAGVLAGISDSVAQKI----------------------SGIK 68
           W+ Y   L  +P++T+ I++G L G  D  AQ I                      + IK
Sbjct: 5   WRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADADAEIK 64

Query: 69  ---------KLQFRRLLLLMLYGFAYAGPFGHFLHKLMDRIFKGK-----KGNTTVAKKV 128
                    K+ ++R+ +  ++GF + GP GHF ++ +D+  K K     K    VA KV
Sbjct: 65  VKWKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKV 124

Query: 129 LLEQVTSSPWNNLFFMMYYGLVVEGRPWSLVKAKVRKDYPTIQLTAWRFWPIVGWVNYQY 184
            ++ +   P + L F  Y G    G+  + VK  +++D+          WP++   N++Y
Sbjct: 125 AMDGLIFGPVDLLVFFTYMGFAT-GKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRY 184

[Close]
BLAST of Cucsat.G3986.T1 vs. TAIR 10
Match: AT5G19750.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 68.9 bits (167), Expect = 4.7e-12
Identity = 45/169 (26.63%), Postives = 85/169 (50.30%), Query Frame = 0 

Query: 12  YLLQLQKNPLRTKAITAGVLAGISDSVAQ-KISGIKKLQFRRLLLLMLYGFAYAGPFGHF 71
           Y   L  +P+ TKA+TA +L  + D + Q  I+    L  +R L     G    GP  HF
Sbjct: 118 YQALLSNSPVLTKAVTAALLNLVGDLICQLTINKTSSLDKKRTLTFTFLGLGLVGPTLHF 177

Query: 72  LHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNNLFFMMYYGLVV--EGRPWSLVKAKVR 131
            +  + ++     G +    ++LL+Q   +P   +F  ++   VV  EG+P S V  K++
Sbjct: 178 WYLYLSKVVTA-SGLSGAVIRLLLDQFVFAP---IFVGVFLSAVVTLEGKP-SNVIPKLQ 237

Query: 132 KDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKA 178
           +++    +  W+ W    ++N++++P  ++V+  + VA  W + L+ KA
Sbjct: 238 QEWTGAMIANWQLWIPFQFLNFRFVPQNYQVLASNVVALAWNVILSFKA 281

The following BLAST results are available for this feature:
BLAST of Cucsat.G3986.T1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ZS515.3e-6160.92Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana OX=3702 GN=PMP22 PE=1... [more]
Q54GD87.0e-2130.12PXMP2/4 family protein 3 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290223 PE... [more]
Q54FR41.1e-1835.54PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE... [more]
Q2KIY15.2e-1632.75Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3[more]
P429255.2e-1630.73Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2[more]
BLAST of Cucsat.G3986.T1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147155.12.02e-131100.00peroxisomal membrane protein PMP22 [Cucumis sativus] >KGN61586.1 hypothetical pr... [more]
XP_008460659.12.76e-12998.36PREDICTED: peroxisomal membrane protein PMP22 [Cucumis melo] >KAA0050714.1 perox... [more]
XP_038906760.14.73e-12696.11peroxisomal membrane protein PMP22 [Benincasa hispida][more]
XP_023006319.14.54e-12494.44peroxisomal membrane protein PMP22 [Cucurbita maxima][more]
XP_022959090.11.30e-12393.89peroxisomal membrane protein PMP22 [Cucurbita moschata] >XP_023547635.1 peroxiso... [more]
BLAST of Cucsat.G3986.T1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNM99.80e-132100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173050 PE=3 SV=1[more]
A0A5D3BQ131.34e-12998.36Peroxisomal membrane protein PMP22 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3CDE71.34e-12998.36peroxisomal membrane protein PMP22 OS=Cucumis melo OX=3656 GN=LOC103499432 PE=3 ... [more]
A0A6J1L1V02.20e-12494.44peroxisomal membrane protein PMP22 OS=Cucurbita maxima OX=3661 GN=LOC111499089 P... [more]
A0A6J1H5B26.30e-12493.89peroxisomal membrane protein PMP22 OS=Cucurbita moschata OX=3662 GN=LOC111460189... [more]
BLAST of Cucsat.G3986.T1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G14305.14.9e-8681.01Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [more]
AT4G14305.21.1e-7484.11Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [more]
AT4G04470.13.8e-6260.92Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [more]
AT3G24570.11.2e-1224.17Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [more]
AT5G19750.14.7e-1226.63Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 114..174
e-value: 2.3E-17
score: 62.9
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 1..182
NoneNo IPR availablePANTHERPTHR11266:SF46OS08G0566900 PROTEINcoord: 1..182

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G3986Cucsat.G3986gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G3986.T1.E1Cucsat.G3986.T1.E1exon
Cucsat.G3986.T1.E2Cucsat.G3986.T1.E2exon
Cucsat.G3986.T1.E3Cucsat.G3986.T1.E3exon
Cucsat.G3986.T1.E4Cucsat.G3986.T1.E4exon
Cucsat.G3986.T1.E5Cucsat.G3986.T1.E5exon
Cucsat.G3986.T1.E6Cucsat.G3986.T1.E6exon
Cucsat.G3986.T1.E7Cucsat.G3986.T1.E7exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G3986.T1.C7Cucsat.G3986.T1.C7CDS
Cucsat.G3986.T1.C6Cucsat.G3986.T1.C6CDS
Cucsat.G3986.T1.C5Cucsat.G3986.T1.C5CDS
Cucsat.G3986.T1.C4Cucsat.G3986.T1.C4CDS
Cucsat.G3986.T1.C3Cucsat.G3986.T1.C3CDS
Cucsat.G3986.T1.C2Cucsat.G3986.T1.C2CDS
Cucsat.G3986.T1.C1Cucsat.G3986.T1.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G3986.T1Cucsat.G3986.T1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005737 cytoplasm