Cucsat.G3791.T15 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G3791.T15
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	XB3 ortholog 5 in Arabidopsis thaliana
Location	ctg105: 1607674 .. 1611346 (+)
RNA-Seq Expression	Cucsat.G3791.T15
Synteny	Cucsat.G3791.T15

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTATATACTATCAATGCTCCCTGCATTTAGGCTCAAATATTAATTTGTTTCAACATGTAAATTCTTAATATCAATTGGAGAGAAAAATGACATTAGATGGGTGAAATTTTCTATTCTAGTACATGTTAAATTATCATTAGGCTTGGAGGCTTAAATAAACTTATTGGTTTATGTACATTTTAACACGTAAATGTCATCTTAATATATCAGGTTGAGCATAACTTAATTGATTTACAAATTTGCCCTTGACCAAGAGGTCAGAGGTTCGGAGCTTGTCACCTACCATGTCGTTGAATTCAAAAGAAAAATGAAAATACTTCTTCATTGTGTTGAAGCAGTCTCTAAACTATACAACTGGCAACTTCATTTTGATACTATTTCTGTTCTCAAAAGGATGTCTTTTATGATGTTTTGTAGAATCATATTAGTCTCTTCTCTGGTTGGATGCGGGAATTTTATGGGCCGGAGTTTCTTGAAGTACTAGCTCCTCATTTCCTTTCACGGAAAGTGTGAGTATCTTTTCAATGTGATTATGGTCATGTTTATCTTTTCCCCCCTCTTTCAAATAATATTGATACCCTGCATTATATGCTAGTTGTTAAAGGCACCAGCTAATCTCTTCCACTATCTTTTGATATTTGTCCTGTTTTTCTGTAAAGCCATGGATTGTTTTATCAGTACTTTGTATATGATATTGCTTGTACATTAACCATGACAATTTCTGCAGCTGGATAGTTGTTTTACCTTGTGGTTCTCGAAATCCTATGAAGCCTACCAAGTTGGAGCTTGCCGTATATGCTAGCTTACAGGTATTGGTTATAATATGTCAGTCTTCCATTTCCTTCCTTTGACTGTATTGTGATAGTTGTGATCCAAGTTATATTTCATTATCCCGTCTCTAGAAAATGAATATATGATTTCTGTGAAGATCATACACCCCCACCCTCAACCCCACCACAGAAATAAAGGGAAAAAAAATAGAGAGAGGGAGAGGAGTAGCTTATGTGCGATCTTTATAACTTATATGACTTATATGCATTTTTTCTATTTTATGCCTTTAAAGGATTCATGAACTTCTAGTTATGTCTAATCATTGCGAAAGGTTTCACCAGTCTCTGCTTTCCTGCAAAAATGCTTTATTTTATGTACTCGTTTTGCTTTTGGTGGTTGAATCAAATTGATAATTATTTAATAACTGAATCAACTATGGCATATATAGGGGCGTAAAGGAATTTCTTTCTTGGACTGTATAGGTCAGCCTCAATTTGTTTTGAAAATGTGAATGCAACATATTCTTTGTTGAGATTTGGAATAAAATAAAAAATGTTGGTTCCTGGGGATTGTTCTGCAAATCTGTCATCTGCTAAACAAACAAATTTGATAGCTTCTTTGGCATCCTGCTCTAACACAATAGCTTCCTTAGCATCATGCTCTGACCAATGTATTTTATTGTGAATGAGATACTGCTGTTTTATCTATACATTGTACTAGTTATACTGGGGGATTTGTTTATCTTCTAAAATATTAATGGGGATTCGTTTCTCTTTCTAAAAAGTATTAGGGGATTCTATATATCTTGCTCATGTGTAGACTTTTTTATTGAATGGACAGGATGCCCAGCCTCGTCTAGTTATTCCATTGTGGAAATCATATTTAGAGGAACATAGGTTACAGGAATCTGATCCGTCTGTTGTCATTGTCGACAACACTCCAAGTAATTTTTAATTGCTAGAAAACACCATTTCACAGTTGTTGACTTCTTCCATTTTATTTATTGACCTTGGCTTTTTGCTCTCAGACCTAACCCCAAGAGGAGGGAGGAGGCGAAGACGGAGTTGCCACACCTCCTGGGAAGCCAGATGTCGATTTCGAAAATCAAAGAGTACGTATGAAGATAAATGCTCATACACTTCTATTTAAAAGTAAATCATTCACACTCCATGTTTGAAAATTCTATAAAAACATAAATTATAATTTTCAAGTTTGATGTTTCAAATATCAAATGTCTTATATGCCCACTGTTTTTCATCCTACAAATTATTCAGCAGGTGGAATCATTTTTTGTTGCTATTATAGTTGAGATGTAGTAAGTAATTTTGTTTAATTTCTGTGGTTTCTGCAGCTGGACGCCTTAGACTCGCACCTGCTAATGAGTACGACAGACAACAACTTCAATGGTTTTGTGATGCTTGCAAAGGGATTCCTCAGCCAAAGGTACCGTGCCTTTTCTTTCTTATTTCTAGAAAGTGACAGAAACAGATTTATTAACACATTGTTCTCAGGCTATCAGTTTTGGAATATCTATATTGTTGTGGTTTAAACTTTCAAGCTAATCTTGAGAAAACTTAACTGGAGGCAAACTTTAACAAATCCATTATCCAAAGGGTTTTTTTTTATATATTATAATCGAGTATTTTCTTAAATCGAGAATAGTTTTCTAACATCATTTCAATGAGGTCTCGGTATTTCATGCTGTAGTCTTTGACGATACATGCTTATCCGTGGAGGGAAAAACTGCATTTCTTACGTTTTCCTGTCTTCGAAGTATTTTTTTGTCTATGCCTGCATTCCCATTAAAGATAAATGAATGTTGCTTTTGTGGGGCTGATGATAATATCAAGTGCTGTTTTGAAATTTCAGGTGCAATCTACAGCTTCGCATGATTACAAGAGCCCAATCAACATTGCGACGATATCTCCCGGTGCTGAAGATCCGGAGCTCATGATGGCCATAAATGCCTCTATTCAGTCAGCTATGCAGGAAAGAGGACAGCTTCATCATAATCCTCATTCATCGAGTTCTGAAGCAGGTGCCTCCAGTAGTGGCGCATTACCTCAACCTGCTCCTCCTAAAACAAGTTCTAGCAAATGGACAGTGCACGAAGCAAGCCACGGTGCTTGTGCAGAAACACCAAATGATCCTGTCCCTGTCATCCAGATCATGCATCCTCCAAATGCAGTTCCCACAGCTCCACCTGTGGTAGCCAATACTTTTGAGGCTAGCACAGGCACAGTTGACTACCCGTTGGTTGATTCTAACTCTGCAAACGTCATACCATCTTCATCAGTTGGGAATGAAGGGAAACAAAGTAACGGCAACTCGACGTGTGTCATATGTTTGGATTCTCCAGTAGAAGGAGCCTGTGTTCCCTGCGGCCATATGGCTGGATGTATGTCTTGTCTAAATGAGATCAAAACCAAGAATTGGGGATGCCCAGTTTGTCGCACCAAGATCAATCAAGTCATAAAGTTGTATGTGGTATGATGAGGCCTACAAATCAATTAGCACAATCAGATGAAGTATCGTTGAACTTGGTCCAATATAGTTTGCGTTACATATCTTTACCTTTGATACTTACATCATATAAACTTTTGAAGTCACAGATGTAAATTATTTGGATGGAAAGAAGCAGATTGTTTTACAGTTACAACTTCTGCTAAGAAAAAGAAAAAAACGGTAGTAAAATGAGTATTATACTCATAAATTAGGCTCTAGGCTTATGTGTGTATAAATATATTTTGTGTATGAATTTGTTTATTTCAGATTACGAGTTTGTTCATTCGTTGTTTACATCTAGTTTTTAAAGGTGTGCTTTAATATGGTGAAGATGTTATGTTTAAACTTGTGTAGCATCATTTTCTCTCAAATAAGTGAAGGAAGTTTTATTTTTGA

Coding sequence (CDS)

ATGATGGCCATAAATGCCTCTATTCAGTCAGCTATGCAGGAAAGAGGACAGCTTCATCATAATCCTCATTCATCGAGTTCTGAAGCAGGTGCCTCCAGTAGTGGCGCATTACCTCAACCTGCTCCTCCTAAAACAAGTTCTAGCAAATGGACAGTGCACGAAGCAAGCCACGGTGCTTGTGCAGAAACACCAAATGATCCTGTCCCTGTCATCCAGATCATGCATCCTCCAAATGCAGTTCCCACAGCTCCACCTGTGGTAGCCAATACTTTTGAGGCTAGCACAGGCACAGTTGACTACCCGTTGGTTGATTCTAACTCTGCAAACGTCATACCATCTTCATCAGTTGGGAATGAAGGGAAACAAAGTAACGGCAACTCGACGTGTGTCATATGTTTGGATTCTCCAGTAGAAGGAGCCTGTGTTCCCTGCGGCCATATGGCTGGATGTATGTCTTGTCTAAATGAGATCAAAACCAAGAATTGGGGATGCCCAGTTTGTCGCACCAAGATCAATCAAGTCATAAAGTTGTATGTGGTATGA

Protein sequence

MMAINASIQSAMQERGQLHHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHEASHGACAETPNDPVPVIQIMHPPNAVPTAPPVVANTFEASTGTVDYPLVDSNSANVIPSSSVGNEGKQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQVIKLYVV

Homology

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BLAST of Cucsat.G3791.T15 vs. ExPASy Swiss-Prot
Match: Q4FE47 (Putative E3 ubiquitin-protein ligase XBAT35 OS=Arabidopsis thaliana OX=3702 GN=XBAT35 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-26
Identity = 78/186 (41.94%), Postives = 102/186 (54.84%), Query Frame = 0


Query: 2   MAINASIQSAMQERGQL-HHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHEASHGAC 61
           M +NAS+ + M +   L HH+   +SS +G SSS      APP   +S +  +    G  
Sbjct: 299 MGMNASLHTTMSDPSNLNHHSIGQASSSSGPSSS-----TAPPSGKASAFGFNSHGIGIV 358

Query: 62  AETPNDPVPVIQIMHPPNAVPTAPPVVANTF-EASTGTVDYPLVDSN-----SANVIPSS 121
            E+                 P+APP+  +       G + YP +DS      SA  +P+S
Sbjct: 359 LESS----------------PSAPPLTDDDIATVDDGPIHYPSIDSTPVDLPSAASLPAS 418

Query: 122 SVGNEGKQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQV 181
           + G E K+     TC ICLD+P E  CVPCGH+AGCMSCL EIK+KNWGCPVCR KI+QV
Sbjct: 419 TEG-ERKEDGNTGTCAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQV 462

[Close]

BLAST of Cucsat.G3791.T15 vs. ExPASy Swiss-Prot
Match: Q7XI08 (Probable E3 ubiquitin-protein ligase XBOS34 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS34 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.2e-26
Identity = 89/227 (39.21%), Postives = 118/227 (51.98%), Query Frame = 0


Query: 2   MAINASIQSAMQE------------RGQLHHNPHSSS--------SEAGASSSGALPQPA 61
           MAINASI SA+ E                  NP S+S        + A + +SG +P   
Sbjct: 289 MAINASILSAIAEGVPDVQPITTTTATNDWGNPPSNSLNGWGPPDTSAPSKTSGQVPVVT 348

Query: 62  PPKTSSSKWTVHEASHGACA----ETPNDPVPVIQIMHPPNAVPTAPPVVANTFEASTGT 121
              ++ + W V   S G  +    ++ N    V Q   P   VPTAPP+   TF    G 
Sbjct: 349 SSSSTYNGWDVPGTSSGQSSSKHNKSQNSTFVVPQEALPSLPVPTAPPLAVGTF--YDGP 408

Query: 122 VDYPLVDSNSANV-IPSSSVG----------NEG----------KQSNGNS---TCVICL 181
           + YP +DS   +V +PS+  G          NEG            ++GN+   TCVICL
Sbjct: 409 IQYPSIDSTPVDVTMPSADGGTAVSSAKPAENEGDAKPAESDANASNSGNTPPGTCVICL 468

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BLAST of Cucsat.G3791.T15 vs. ExPASy Swiss-Prot
Match: Q9FPH0 (Putative E3 ubiquitin-protein ligase XBAT34 OS=Arabidopsis thaliana OX=3702 GN=XBAT34 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.4e-18
Identity = 48/104 (46.15%), Postives = 63/104 (60.58%), Query Frame = 0


Query: 81  PTAPPVVANTFEASTGTVDYPLVDSNS----ANVIPSSSVGNEGKQSNGNSTCVICLDSP 140
           P  PP    T +A+T T + P +  ++    A  +PS    N+      +  CVIC+D+P
Sbjct: 278 PMNPPRFMKTSQATTTTTNVPALSDDALTRVAMSLPSPKTANK-----EDGLCVICVDAP 337

Query: 141 VEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQVIKLYVV 181
            E  CVPCGH+AGC+SCL EI+ K  GCPVCR  I+QVIKLY V
Sbjct: 338 SEAVCVPCGHVAGCISCLKEIENKKMGCPVCRANIDQVIKLYHV 376

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BLAST of Cucsat.G3791.T15 vs. ExPASy Swiss-Prot
Match: Q84ME1 (Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana OX=3702 GN=LUL3 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.3e-07
Identity = 22/60 (36.67%), Postives = 35/60 (58.33%), Query Frame = 0


Query: 120 GKQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQVIKLYV 179
           G +  G   CVICL  P + A +PC H+  C  C  E++ +   CP+CR  I++++K+ V
Sbjct: 312 GLEDTGGKECVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNKCPICRQPIHELVKIKV 371

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BLAST of Cucsat.G3791.T15 vs. ExPASy Swiss-Prot
Match: Q0WS06 (E3 ubiquitin-protein ligase APD1 OS=Arabidopsis thaliana OX=3702 GN=APD1 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.4e-07
Identity = 24/66 (36.36%), Postives = 37/66 (56.06%), Query Frame = 0


Query: 116 VGNEGKQSN-GNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQV 175
           +GN+G+ SN     C IC D P +   +PCGH   C  C   ++  +  CP+CR K+ +V
Sbjct: 376 MGNDGEASNRSRRLCAICFDVPRDCFFLPCGHSVSCYECGTTMQEADGSCPICRRKMKKV 435

Query: 176 IKLYVV 181
            ++Y V
Sbjct: 436 KRIYTV 441

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BLAST of Cucsat.G3791.T15 vs. NCBI nr
Match: XP_004147147.1 (putative E3 ubiquitin-protein ligase XBAT34 [Cucumis sativus] >KGN61597.1 hypothetical protein Csa_005991 [Cucumis sativus])

HSP 1 Score: 356 bits (913), Expect = 2.96e-119
Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MMAINASIQSAMQERGQLHHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHEASHGAC 60
           MMAINASIQSAMQERGQLHHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHEASH AC
Sbjct: 308 MMAINASIQSAMQERGQLHHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHEASHDAC 367

Query: 61  AETPNDPVPVIQIMHPPNAVPTAPPVVANTFEASTGTVDYPLVDSNSANVIPSSSVGNEG 120
           AETPNDPVPVIQIMHPPNAVPTAPPVVANTFEASTGTVDYPLVDS+SANVIPSSSVGNEG
Sbjct: 368 AETPNDPVPVIQIMHPPNAVPTAPPVVANTFEASTGTVDYPLVDSDSANVIPSSSVGNEG 427

Query: 121 KQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQVIKLYVV 180
           KQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQVIKLYVV
Sbjct: 428 KQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQVIKLYVV 487

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BLAST of Cucsat.G3791.T15 vs. NCBI nr
Match: XP_008460647.1 (PREDICTED: putative E3 ubiquitin-protein ligase XBAT34 [Cucumis melo] >KAA0065646.1 putative E3 ubiquitin-protein ligase XBAT34 [Cucumis melo var. makuwa] >TYK01435.1 putative E3 ubiquitin-protein ligase XBAT34 [Cucumis melo var. makuwa])

HSP 1 Score: 327 bits (837), Expect = 1.17e-107
Identity = 165/187 (88.24%), Postives = 169/187 (90.37%), Query Frame = 0


Query: 1   MMAINASIQSAMQERGQLHHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHEASHGA- 60
           ++AINASIQSAMQERGQLHHNPHSSSSEAGASSS ALPQPAPPKTSSSKWTVHEASHG  
Sbjct: 309 VIAINASIQSAMQERGQLHHNPHSSSSEAGASSSSALPQPAPPKTSSSKWTVHEASHGCY 368

Query: 61  ------CAETPNDPVPVIQIMHPPNAVPTAPPVVANTFEASTGTVDYPLVDSNSANVIPS 120
                 CAETPNDPVPVI IMHPPNAVPTAPPV ANTF+AST TVDYPLVDS+  NVIPS
Sbjct: 369 SPSHGVCAETPNDPVPVIHIMHPPNAVPTAPPVAANTFDASTSTVDYPLVDSDLVNVIPS 428

Query: 121 SSVGNEGKQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQ 180
           S VGNEGKQ NGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIK KNWGCPVCRTKINQ
Sbjct: 429 SFVGNEGKQGNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKAKNWGCPVCRTKINQ 488

[Close]

BLAST of Cucsat.G3791.T15 vs. NCBI nr
Match: XP_038907086.1 (putative E3 ubiquitin-protein ligase XBAT34 [Benincasa hispida])

HSP 1 Score: 288 bits (736), Expect = 1.79e-92
Identity = 148/184 (80.43%), Postives = 156/184 (84.78%), Query Frame = 0


Query: 1   MMAINASIQSAMQERGQLHHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHEASHGAC 60
           +MAINASIQSAMQERGQ HHNPHSS+SEAGASSS ALPQP PPKTSS KWTVHEASHG  
Sbjct: 309 VMAINASIQSAMQERGQ-HHNPHSSNSEAGASSSSALPQPVPPKTSSCKWTVHEASHGYN 368

Query: 61  ----AETPNDPVPVIQIMHPPNAVPTAPPVVANTFEASTGTVDYPLVDSNSANVIPSSSV 120
                E  ND VPVIQ+ HPPNA PTAPP+ A TFEAST  VDYPLV S++ N +PSSS+
Sbjct: 369 PSHHTEIQNDTVPVIQVTHPPNAAPTAPPMAAKTFEASTSMVDYPLVGSDTINDVPSSSI 428

Query: 121 GNEGKQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQVIK 180
           GNE KQ NGNS CVICLDSPVEGACVPCGHMAGCMSCLNEIK KNWGCPVCRTKINQVIK
Sbjct: 429 GNEEKQGNGNSMCVICLDSPVEGACVPCGHMAGCMSCLNEIKAKNWGCPVCRTKINQVIK 488

[Close]

BLAST of Cucsat.G3791.T15 vs. NCBI nr
Match: XP_023549005.1 (putative E3 ubiquitin-protein ligase XBAT34 [Cucurbita pepo subsp. pepo] >XP_023549006.1 putative E3 ubiquitin-protein ligase XBAT34 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253 bits (646), Expect = 6.18e-79
Identity = 140/185 (75.68%), Postives = 153/185 (82.70%), Query Frame = 0


Query: 2   MAINASIQSAMQERGQLHHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHE-ASHGA- 61
           MAINASIQSAMQE GQLH NPHSSSSEAGASSS ALP PAPP+  SSK  +HE ASHG  
Sbjct: 311 MAINASIQSAMQESGQLH-NPHSSSSEAGASSSSALPPPAPPRPGSSKSAMHEEASHGYN 370

Query: 62  ---CAETPNDPVPVIQIMHPPNAVPTAPPVVANTFEASTGTV-DYPLVDSNSANVIPSSS 121
              CA+ P +    IQI HPPNAVPTAPPV A TFEAST TV DYPLVDS+  + + SSS
Sbjct: 371 PSHCAQAPMNTG--IQITHPPNAVPTAPPVEAKTFEASTSTVGDYPLVDSDPTDSMASSS 430

Query: 122 VGNEGKQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQVI 180
           VG++GKQ +GN+TCVICLD+PVEGACVPCGHMAGCMSCL+EIK KNWGCPVCRTKINQVI
Sbjct: 431 VGDDGKQGSGNTTCVICLDAPVEGACVPCGHMAGCMSCLSEIKAKNWGCPVCRTKINQVI 490

[Close]

BLAST of Cucsat.G3791.T15 vs. NCBI nr
Match: XP_022959395.1 (putative E3 ubiquitin-protein ligase XBAT34 [Cucurbita moschata] >XP_022959396.1 putative E3 ubiquitin-protein ligase XBAT34 [Cucurbita moschata] >XP_022959397.1 putative E3 ubiquitin-protein ligase XBAT34 [Cucurbita moschata])

HSP 1 Score: 251 bits (640), Expect = 4.90e-78
Identity = 136/183 (74.32%), Postives = 149/183 (81.42%), Query Frame = 0


Query: 2   MAINASIQSAMQERGQLHHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHEASHGACA 61
           MAINASIQSAMQE GQLH NPHSSSSEAGASSS ALP PAPP+  SSK T+HE +     
Sbjct: 311 MAINASIQSAMQESGQLH-NPHSSSSEAGASSSSALPPPAPPRPGSSKSTMHEEASHCYN 370

Query: 62  ETPNDPVPV---IQIMHPPNAVPTAPPVVANTFEASTGTV-DYPLVDSNSANVIPSSSVG 121
            +     P+   IQI HPPNAVPTAPPV A TFEAST TV DYPLVDSN  + + SSSVG
Sbjct: 371 PSHRAQAPMNTSIQITHPPNAVPTAPPVEAKTFEASTSTVGDYPLVDSNPTDSMASSSVG 430

Query: 122 NEGKQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQVIKL 180
           ++GKQ +GN+TCVICLD+PVEGACVPCGHMAGCMSCL+EIK KNWGCPVCRTKINQVIKL
Sbjct: 431 DDGKQGSGNTTCVICLDAPVEGACVPCGHMAGCMSCLSEIKAKNWGCPVCRTKINQVIKL 490

[Close]

BLAST of Cucsat.G3791.T15 vs. ExPASy TrEMBL
Match: A0A0A0LLI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G174140 PE=4 SV=1)

HSP 1 Score: 356 bits (913), Expect = 1.43e-119
Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MMAINASIQSAMQERGQLHHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHEASHGAC 60
           MMAINASIQSAMQERGQLHHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHEASH AC
Sbjct: 308 MMAINASIQSAMQERGQLHHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHEASHDAC 367

Query: 61  AETPNDPVPVIQIMHPPNAVPTAPPVVANTFEASTGTVDYPLVDSNSANVIPSSSVGNEG 120
           AETPNDPVPVIQIMHPPNAVPTAPPVVANTFEASTGTVDYPLVDS+SANVIPSSSVGNEG
Sbjct: 368 AETPNDPVPVIQIMHPPNAVPTAPPVVANTFEASTGTVDYPLVDSDSANVIPSSSVGNEG 427

Query: 121 KQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQVIKLYVV 180
           KQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQVIKLYVV
Sbjct: 428 KQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQVIKLYVV 487

[Close]

BLAST of Cucsat.G3791.T15 vs. ExPASy TrEMBL
Match: A0A5D3BQH3 (Putative E3 ubiquitin-protein ligase XBAT34 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00200 PE=4 SV=1)

HSP 1 Score: 327 bits (837), Expect = 5.68e-108
Identity = 165/187 (88.24%), Postives = 169/187 (90.37%), Query Frame = 0


Query: 1   MMAINASIQSAMQERGQLHHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHEASHGA- 60
           ++AINASIQSAMQERGQLHHNPHSSSSEAGASSS ALPQPAPPKTSSSKWTVHEASHG  
Sbjct: 309 VIAINASIQSAMQERGQLHHNPHSSSSEAGASSSSALPQPAPPKTSSSKWTVHEASHGCY 368

Query: 61  ------CAETPNDPVPVIQIMHPPNAVPTAPPVVANTFEASTGTVDYPLVDSNSANVIPS 120
                 CAETPNDPVPVI IMHPPNAVPTAPPV ANTF+AST TVDYPLVDS+  NVIPS
Sbjct: 369 SPSHGVCAETPNDPVPVIHIMHPPNAVPTAPPVAANTFDASTSTVDYPLVDSDLVNVIPS 428

Query: 121 SSVGNEGKQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQ 180
           S VGNEGKQ NGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIK KNWGCPVCRTKINQ
Sbjct: 429 SFVGNEGKQGNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKAKNWGCPVCRTKINQ 488

[Close]

BLAST of Cucsat.G3791.T15 vs. ExPASy TrEMBL
Match: A0A1S3CCX3 (putative E3 ubiquitin-protein ligase XBAT34 OS=Cucumis melo OX=3656 GN=LOC103499423 PE=4 SV=1)

HSP 1 Score: 327 bits (837), Expect = 5.68e-108
Identity = 165/187 (88.24%), Postives = 169/187 (90.37%), Query Frame = 0


Query: 1   MMAINASIQSAMQERGQLHHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHEASHGA- 60
           ++AINASIQSAMQERGQLHHNPHSSSSEAGASSS ALPQPAPPKTSSSKWTVHEASHG  
Sbjct: 309 VIAINASIQSAMQERGQLHHNPHSSSSEAGASSSSALPQPAPPKTSSSKWTVHEASHGCY 368

Query: 61  ------CAETPNDPVPVIQIMHPPNAVPTAPPVVANTFEASTGTVDYPLVDSNSANVIPS 120
                 CAETPNDPVPVI IMHPPNAVPTAPPV ANTF+AST TVDYPLVDS+  NVIPS
Sbjct: 369 SPSHGVCAETPNDPVPVIHIMHPPNAVPTAPPVAANTFDASTSTVDYPLVDSDLVNVIPS 428

Query: 121 SSVGNEGKQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQ 180
           S VGNEGKQ NGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIK KNWGCPVCRTKINQ
Sbjct: 429 SFVGNEGKQGNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKAKNWGCPVCRTKINQ 488

[Close]

BLAST of Cucsat.G3791.T15 vs. ExPASy TrEMBL
Match: A0A6J1H4R2 (putative E3 ubiquitin-protein ligase XBAT34 OS=Cucurbita moschata OX=3662 GN=LOC111460381 PE=4 SV=1)

HSP 1 Score: 251 bits (640), Expect = 2.37e-78
Identity = 136/183 (74.32%), Postives = 149/183 (81.42%), Query Frame = 0


Query: 2   MAINASIQSAMQERGQLHHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHEASHGACA 61
           MAINASIQSAMQE GQLH NPHSSSSEAGASSS ALP PAPP+  SSK T+HE +     
Sbjct: 311 MAINASIQSAMQESGQLH-NPHSSSSEAGASSSSALPPPAPPRPGSSKSTMHEEASHCYN 370

Query: 62  ETPNDPVPV---IQIMHPPNAVPTAPPVVANTFEASTGTV-DYPLVDSNSANVIPSSSVG 121
            +     P+   IQI HPPNAVPTAPPV A TFEAST TV DYPLVDSN  + + SSSVG
Sbjct: 371 PSHRAQAPMNTSIQITHPPNAVPTAPPVEAKTFEASTSTVGDYPLVDSNPTDSMASSSVG 430

Query: 122 NEGKQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQVIKL 180
           ++GKQ +GN+TCVICLD+PVEGACVPCGHMAGCMSCL+EIK KNWGCPVCRTKINQVIKL
Sbjct: 431 DDGKQGSGNTTCVICLDAPVEGACVPCGHMAGCMSCLSEIKAKNWGCPVCRTKINQVIKL 490

[Close]

BLAST of Cucsat.G3791.T15 vs. ExPASy TrEMBL
Match: A0A6J1KUT9 (putative E3 ubiquitin-protein ligase XBAT34 OS=Cucurbita maxima OX=3661 GN=LOC111498913 PE=4 SV=1)

HSP 1 Score: 247 bits (630), Expect = 7.67e-77
Identity = 140/186 (75.27%), Postives = 153/186 (82.26%), Query Frame = 0


Query: 2   MAINASIQSAMQERGQLHHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHE-ASHGA- 61
           MAINASIQSAMQERGQL  NPHSSSSEAGASSS ALP PAPP+  SSK TVHE ASHG  
Sbjct: 311 MAINASIQSAMQERGQLQ-NPHSSSSEAGASSSSALPPPAPPRPGSSKLTVHEEASHGHN 370

Query: 62  ---CAETPNDPVPVIQIMHPPNAVPTAPPVVANTFEASTGTVD-YPLVDSNSANVIPSSS 121
              C++ P +    IQI HPPNAVPTAPPV A TFEAS+  VD YPLV S+S + + SSS
Sbjct: 371 PSHCSQAPMNTD--IQITHPPNAVPTAPPVAAKTFEASSSMVDDYPLVGSDSTDGMASSS 430

Query: 122 -VGNEGKQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQV 180
            VG++GKQ +GNSTCVICLD+PVEGACVPCGHMAGCMSCL+EIK KNWGCPVCRTKINQV
Sbjct: 431 GVGDDGKQGSGNSTCVICLDAPVEGACVPCGHMAGCMSCLSEIKVKNWGCPVCRTKINQV 490

[Close]

BLAST of Cucsat.G3791.T15 vs. TAIR 10
Match: AT3G23280.1 (XB3 ortholog 5 in Arabidopsis thaliana )

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-27
Identity = 78/186 (41.94%), Postives = 102/186 (54.84%), Query Frame = 0


Query: 2   MAINASIQSAMQERGQL-HHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHEASHGAC 61
           M +NAS+ + M +   L HH+   +SS +G SSS      APP   +S +  +    G  
Sbjct: 299 MGMNASLHTTMSDPSNLNHHSIGQASSSSGPSSS-----TAPPSGKASAFGFNSHGIGIV 358

Query: 62  AETPNDPVPVIQIMHPPNAVPTAPPVVANTF-EASTGTVDYPLVDSN-----SANVIPSS 121
            E+                 P+APP+  +       G + YP +DS      SA  +P+S
Sbjct: 359 LESS----------------PSAPPLTDDDIATVDDGPIHYPSIDSTPVDLPSAASLPAS 418

Query: 122 SVGNEGKQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQV 181
           + G E K+     TC ICLD+P E  CVPCGH+AGCMSCL EIK+KNWGCPVCR KI+QV
Sbjct: 419 TEG-ERKEDGNTGTCAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQV 462

[Close]

BLAST of Cucsat.G3791.T15 vs. TAIR 10
Match: AT3G23280.2 (XB3 ortholog 5 in Arabidopsis thaliana )

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-27
Identity = 78/186 (41.94%), Postives = 102/186 (54.84%), Query Frame = 0


Query: 2   MAINASIQSAMQERGQL-HHNPHSSSSEAGASSSGALPQPAPPKTSSSKWTVHEASHGAC 61
           M +NAS+ + M +   L HH+   +SS +G SSS      APP   +S +  +    G  
Sbjct: 275 MGMNASLHTTMSDPSNLNHHSIGQASSSSGPSSS-----TAPPSGKASAFGFNSHGIGIV 334

Query: 62  AETPNDPVPVIQIMHPPNAVPTAPPVVANTF-EASTGTVDYPLVDSN-----SANVIPSS 121
            E+                 P+APP+  +       G + YP +DS      SA  +P+S
Sbjct: 335 LESS----------------PSAPPLTDDDIATVDDGPIHYPSIDSTPVDLPSAASLPAS 394

Query: 122 SVGNEGKQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQV 181
           + G E K+     TC ICLD+P E  CVPCGH+AGCMSCL EIK+KNWGCPVCR KI+QV
Sbjct: 395 TEG-ERKEDGNTGTCAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQV 438

[Close]

BLAST of Cucsat.G3791.T15 vs. TAIR 10
Match: AT4G14365.1 (XB3 ortholog 4 in Arabidopsis thaliana )

HSP 1 Score: 91.7 bits (226), Expect = 6.6e-19
Identity = 48/104 (46.15%), Postives = 63/104 (60.58%), Query Frame = 0


Query: 81  PTAPPVVANTFEASTGTVDYPLVDSNS----ANVIPSSSVGNEGKQSNGNSTCVICLDSP 140
           P  PP    T +A+T T + P +  ++    A  +PS    N+      +  CVIC+D+P
Sbjct: 278 PMNPPRFMKTSQATTTTTNVPALSDDALTRVAMSLPSPKTANK-----EDGLCVICVDAP 337

Query: 141 VEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQVIKLYVV 181
            E  CVPCGH+AGC+SCL EI+ K  GCPVCR  I+QVIKLY V
Sbjct: 338 SEAVCVPCGHVAGCISCLKEIENKKMGCPVCRANIDQVIKLYHV 376

[Close]

BLAST of Cucsat.G3791.T15 vs. TAIR 10
Match: AT5G19080.1 (RING/U-box superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-08
Identity = 22/60 (36.67%), Postives = 35/60 (58.33%), Query Frame = 0


Query: 120 GKQSNGNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQVIKLYV 179
           G +  G   CVICL  P + A +PC H+  C  C  E++ +   CP+CR  I++++K+ V
Sbjct: 312 GLEDTGGKECVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNKCPICRQPIHELVKIKV 371

[Close]

BLAST of Cucsat.G3791.T15 vs. TAIR 10
Match: AT2G38185.1 (RING/U-box superfamily protein )

HSP 1 Score: 56.2 bits (134), Expect = 3.1e-08
Identity = 24/66 (36.36%), Postives = 37/66 (56.06%), Query Frame = 0


Query: 116 VGNEGKQSN-GNSTCVICLDSPVEGACVPCGHMAGCMSCLNEIKTKNWGCPVCRTKINQV 175
           +GN+G+ SN     C IC D P +   +PCGH   C  C   ++  +  CP+CR K+ +V
Sbjct: 376 MGNDGEASNRSRRLCAICFDVPRDCFFLPCGHSVSCYECGTTMQEADGSCPICRRKMKKV 435

Query: 176 IKLYVV 181
            ++Y V
Sbjct: 436 KRIYTV 441

The following BLAST results are available for this feature:

BLAST of Cucsat.G3791.T15 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4FE47	2.5e-26	41.94	Putative E3 ubiquitin-protein ligase XBAT35 OS=Arabidopsis thaliana OX=3702 GN=X...	[more]
Q7XI08	3.2e-26	39.21	Probable E3 ubiquitin-protein ligase XBOS34 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q9FPH0	9.4e-18	46.15	Putative E3 ubiquitin-protein ligase XBAT34 OS=Arabidopsis thaliana OX=3702 GN=X...	[more]
Q84ME1	3.3e-07	36.67	Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana OX=3702 GN=LUL...	[more]
Q0WS06	4.4e-07	36.36	E3 ubiquitin-protein ligase APD1 OS=Arabidopsis thaliana OX=3702 GN=APD1 PE=2 SV...	[more]

BLAST of Cucsat.G3791.T15 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147147.1	2.96e-119	98.89	putative E3 ubiquitin-protein ligase XBAT34 [Cucumis sativus] >KGN61597.1 hypoth...	[more]
XP_008460647.1	1.17e-107	88.24	PREDICTED: putative E3 ubiquitin-protein ligase XBAT34 [Cucumis melo] >KAA006564...	[more]
XP_038907086.1	1.79e-92	80.43	putative E3 ubiquitin-protein ligase XBAT34 [Benincasa hispida]	[more]
XP_023549005.1	6.18e-79	75.68	putative E3 ubiquitin-protein ligase XBAT34 [Cucurbita pepo subsp. pepo] >XP_023...	[more]
XP_022959395.1	4.90e-78	74.32	putative E3 ubiquitin-protein ligase XBAT34 [Cucurbita moschata] >XP_022959396.1...	[more]

BLAST of Cucsat.G3791.T15 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLI3	1.43e-119	98.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G174140 PE=4 SV=1	[more]
A0A5D3BQH3	5.68e-108	88.24	Putative E3 ubiquitin-protein ligase XBAT34 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CCX3	5.68e-108	88.24	putative E3 ubiquitin-protein ligase XBAT34 OS=Cucumis melo OX=3656 GN=LOC103499...	[more]
A0A6J1H4R2	2.37e-78	74.32	putative E3 ubiquitin-protein ligase XBAT34 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1KUT9	7.67e-77	75.27	putative E3 ubiquitin-protein ligase XBAT34 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Cucsat.G3791.T15 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23280.1	1.7e-27	41.94	XB3 ortholog 5 in Arabidopsis thaliana	[more]
AT3G23280.2	1.7e-27	41.94	XB3 ortholog 5 in Arabidopsis thaliana	[more]
AT4G14365.1	6.6e-19	46.15	XB3 ortholog 4 in Arabidopsis thaliana	[more]
AT5G19080.1	2.4e-08	36.67	RING/U-box superfamily protein	[more]
AT2G38185.1	3.1e-08	36.36	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 129..167 e-value: 0.0098 score: 25.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 129..168 score: 11.338544
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 127..174 e-value: 7.6E-14 score: 51.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	PANTHER	PTHR24166	ROLLING PEBBLES, ISOFORM B	coord: 1..180
None	No IPR available	PANTHER	PTHR24166:SF45	UBIQUITIN-PROTEIN LIGASE XBAT35, PUTATIVE-RELATED	coord: 1..180
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 128..174
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 105..180 e-value: 1.3E-16 score: 61.8

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G3791	Cucsat.G3791	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3791.T15.E1	Cucsat.G3791.T15.E1	exon
Cucsat.G3791.T15.E2	Cucsat.G3791.T15.E2	exon
Cucsat.G3791.T15.E3	Cucsat.G3791.T15.E3	exon
Cucsat.G3791.T15.E4	Cucsat.G3791.T15.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3791.T15.C1	Cucsat.G3791.T15.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3791.T15	Cucsat.G3791.T15-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006464	cellular protein modification process
molecular_function	GO:0140096	catalytic activity, acting on a protein
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity