Cucsat.G3644.T16 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTGAAATTATATTATCAAATAATTTACATTAGATAGCTTTTTTTTTAGACTAAGGTATGTATTATACATAACTCATCACCATCGAATCTAACCGGTCTACTTCGTAGCAATTGCTGCGAATGCAAATTTCTGGCCCGCCCTCGATTTCGCCACAGAAGAGGTTCATCGTTGTTATTCAAGTCACCCGCCGGCTCCGGCCATCTTCAATTGAATGCGAGAGCGTGGTTTGATATGTTGGTAATGGAATCGTGAGATTGATGTTGCTGTGATAATAAAGAATCGGGACAAAGCGAAAAGCAGCTCTTGCACAATCGTTTTGATGCGAACATCCTACTTATTGCAACGCTTCGGTTTTCACCACACTCACCGTTCTTCTTCTTCTACCTCATTTCGTTCCCTCTGCACTTCCTCGCCGCCTTCTTTATTTGACTCCAAAACACCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACATCAACCAGAATGTGACAGTTACCGCATTCCACTTATCGGAACTTACTTTCAGTCGCGGAGGCTTTCGTCTCCTTCCAGTTGTTCGAGACGCTCCGTCTTGTTGGGCTTGATTTCATTGGACTCTAATCCCCCTCGTCCTCCTCTTAACCACCATTACGCTTTCCATCGCGGTATCTTCCTTTTCAACTTTGCATTTTTTTTAATGTTAAAGTCTTTATACTTTTTGCTCGGAATGGGGATGTATTTATTCTTGTGCTCAATTCGTAACTTTTTTTCTCTCTCCTTTAAAAACTGGGTTTGTAACTTTTGCAGGTTTTTTCACTAGAGCTAAGCCTGTACAAAGAATTGAATTCAATGATTATCATAGGTAGTGGTTCTTTTTCTTACACAGTTCCCTTGAATGTTATGTAGTGATATAATTATGAAATACATACACATTAACACGTTTATCTCTTCGTAGTTTTGTTCTAATTAATGTAAAGGCGAGCAATTGCTGTTATATCATTTCATTTCCGTGCTCGGCCTGATTGTGTCTTACTCAGTTTTGAAGTTTTGATCTAGTGTTAAATTGTAACTACACTGAAAAGTTCGATTGGTTAGTGAAATGTAATATTTTCAATCTTTTCTTCCAGAATCAGCACCTTTACACTCAAACACCATATCAGGCAGCTATGATTCATAATATTTGAACATATGAAATTTTAACTTGAAATGAGCCAGTTATACTGGAGAAATTTCCGTTTAAGTTGTTAATTAGTATGAATGTAGTCTTTTCAGTTTATTTTTCAACACATAGGATCTTATAGGTAGCACTCAATGTAAATGTGTGTACTTTTGATGAAAACAATCCTCAGGAAGAGATACAGAGTAGAAGGCACGTGAAAAAGGAAATTAACTTATAATCACACAGGAATTGGGATTACCTTATCGTCACTGTTAGTATGTTTTCTTCACATATCCCATAGTGGAAGTTAATTTTACCTCATTGACTTATTTTCTTCATTTTTCCGGTATAATATTTTTATCCTAGTCAACGAGCAGTTACCACTGCTTTGTGGTGCAATTTCCTTGTTTTCTCTCTGAAATTTGGGGTTTGGTTTGCCACATCAAGTCATGTCATGCTCGCAGAAGTTGTGCACTCTGTTGCTGATTTTGCAAATCAGGTATCTTAACCTTTCATCTAGCAAAGCATAACTGTCCATGTCTCATTTTAACTTGAGTTGTTAATCACTGAATGCAGAGAAACTAATTATTTTTAACATTGTAGGCACTTCTTGCTTATGGTCTGAGTAGCTCAAGGCGTGCCCCTGATGCTATCCATCCGTGAGTTATAAATATCTTCGTCATTTTAGTTTCATCCAGTTTGTATACACATAATTTCCAACCTAAGTGGCAATATTGCTTTCTACTTTATACAAGAAGTTATTTTTTTCAATCTTTCCGTGCTAGTGTTATGATTCGGCTGCAATTTTATCTTAATAACCAAATTGAGTGGTTTTCATGCTGTGGTGCAGAAATACTATGACCTATTACTATTATTTTAATCGAAACATCTGAGATATTTTCGTTGTTGAACAGTTACGGATATTCTAAGGAAAGGTTTGTTTGGTCATTGATATCTGCTGTTGGGATCTTTTGTCTTGGTTCTGGTGCTACCATTGTTAATGGAATCCAAAATTTGTGGACTTCACAGGTAACTGGTCAATTGAAATTTGAATCCTGCTTCACATGTTATCACTTTCAAATTTTCTCTTTTCCCATTTGGTACTTAGCTCATTTGTTGTTAGTGGCAACTCTGGATGTTATCTTCTAATTTTGTTTGCTTCAGCCTCCTGCCAATATACATTATGCAGCCTTAGTGATTGGTGGTTCACTTATTATTGAAGGTCTGATTTTATCCTTCTTTAAAATGAATGTCCACAACTACTACTAATTGGATATAATCTAATTTGATTTTACTCCACAATAATTTTATCTGCTCAGGTGCTTCCCTGGTTGTTGCCATTCAAGCTGTCAAGAAAGGTGCTGCTGCAGAGGGAATGAAACTGAGAGACTATGTTTGGCGTGGTCATGATCCCACATCTGTAGCAGTTATGACAGAGGTGGTGACTCTTACATACTGTGGATTGAGGAACATTGTTCCTAAGTGTTAAACTCTCATGTGGTAAAAATTCTTAAGATTATTAAATTAATGAAGCACGAAATGTCAGAAGTACCTAAGCTTGTTTGACACGAGGGAGCGTGCATTCACATAGTTGATTAAGAATTATTAAGTTTAGGGTCAAAGATTTAGAATTGCATCCAATATGATAGAGTATTTTCAGACCTTTTAGTTTTTAGTTGTTTAAGATAGTTTTTAAATCAGTTGAATCTGTGAACTTTTAATGTTCTTCAATGAAGTGGATTAATTCACGGAACTACAGAGTGGTATCATTTGATGTCAAATATATCAATGAAGGATTCTTTTGTCTACGTTTGTGGGTTCCCTTTTCTGTTGGGCGGTTATTTTGTGTATGCTCTTGTACGTTCTTTTATTTTCTTCCACGAAAGCTTGGTTTCTTATGAGGAAAAAGATGCTAGACATTCTGTTGAGCCAGTTTTCTGAAATGTTCAGGATGGTGCTGCAGTCACTGGTCTTATCATTGCTGCTGCATCTCTTGTTGCAGTTAATACCACTGGGAATGCAATTTATGATCCCATCGGTTCCATTATAGTTGGTAACTTACTTGGAATGGTATGTCTCCTACCTGCAACTGTATGCAAATATTTTTTTTCTCCACATTTGTTTATTGAAAGAGACATTTCATAGTGACTATTTATAAACCCTAAATAATAATTGTGTCAATTTAAACTAAATGTATTAATTTACACCCTCTTTCAAATTTGAAACATGCATGACACGGATTTGTTTTATTTGATAAAAGTAAATTCACTACTTTCGTATGTACTAGGTCTTTCTTAGGATGTCTTTACCTGCGTACTCTTACCTAGTTTTCCATCCAAACATTCAATTCCAGGGCTGACATGTGATTGATCACGACGTCCTGTAAAAAAATATAATTGATAGCGAGTAGAAAGCTTTTGTTGAAATAATGAAAAGAAATGCTTCAACCTGACCTCTCAAAAGAAGTCCAAGCCTAGCTACCTTTTGCTTCCAATACCCACTGGCTAAATCTTGGAATCGCAAGAATAGCCACAACCAAACTCTCTTATATCATGTTCTGTAATACAAATAAGTGATAGTGAAGTGAAAAAAAAAGAAACAGCTTCTACAACAAAGCCACGCCACTAATGGAGTGGCAAAGGAAATGCATTATACGGTAGATTAGTAACCGGTGGTCTACAATGGTATTCTCAGTAGTTTACAATTTCTCCCATTGGAATATCATTGTTTTCTCTGTAGTCACAATGTCAGCAAGCACGAGAATTTTAAAAAAGGTTTGAGCTAAAAGTTACATGAATAATAAACAATATAGTAGTCTGAGAGTTACTAAAAAAATTTCAAAAATTTACAGGTGGCTATTTTTCTCATCCAACGTAATCGGCATGCTTTGATCGGCAGAGCAATGGATGAAAATGATATGCAGAAAGTTCTCCAATTCTTAAAGAACGATCCAGTATGGTTATGCTTGATAAATTTCTCGTTGGATCTTTGCTTTAATATTATACTTCATGATTTCAAATTTTGAAGTCTTCTTCTCTAGGTCGTTGATGCTTTATATGATTGCAAAAGCGAGGTGATTGGACCAGGATTTTATAGATTCAAGGCAGAAATAGGTGGATTTTTTTTACTTTTATTTTTCCCTCTATTTTTTTCTTCTATACTCCACCAATGTTACACAGTTTCTCTATTGCTTAGGTTCTTTCATTGATTTTAGTCAATTTAAAAGGTGAATCAAGTATCCATTACTTTCATCATATATGTTATGCCTATGGATTGCCTTCCTTCTGTATATTTTATGCCTTATGTGATTCGTGGCTCGTGACATCCTACATCAGATGTAAATTATTTCAACTTCTATAGCGGCCTCATCATGTCGTTCTGTTATCACTTGTTTGTTCAAAGATCAAAACTTACAGAAAACAATTGGTTGCAAAACTTATAGAAAACGATTGGTTGCAAAGGAGAACAACTGTTTGTTGTATTCTAATTGTGGGATGAAGTAGAGTGATTTTAACTAAAGCACAATCAACTTGTATATTTTTCAACATGCTTAAAAGCTGTGGTCGTTGTCAGTTTTATTTCCAATGATTCTATATTTCAGGCAGTTTATGAAATTATGTACCACCAATATATTTTGATTTTATCTGGCTATATGAAGCAGATTTCAATGGAGTCATGGTGGTGCAAAATTATCTAACTAGGACTGGACGTGAAGAGTGGGCTAGAGAGGTTGATACTGTTTCCTTATCTTCAGCTTTCTCACTAGTGTTCGTTTTTGTTTGATTTGATTTTTTAAACTCAATAATAGTCAAGGAAATGACTGCAATATGATTTCTGGATGTGATCTCTTGTCCAAGAAATACACATTGGACTCTGCTTAATCATGTTGCATGACTCTTAATCCATATTTCTTTAATGTTACTAGAAAATTATTTTTACGAACTGATGATCATTCAATCTGATAACTAAAAAACCTGTCAATGTTTGGACAAGTTCTTGTTTTAAAGAGGGGATTTTGAAATCGCCATCACATTATCTATTTTTATTGTTTTTACTCTGTGTAAGCATTCATGTCCAATGGTAGTTTCCTTAAGATGATGTCTGAACTAAATCCACGTTGAACAGTTTCGTCAAGCTGCAAAGAGCAAGGATGATTCAACTTTGCTCAAAATTATGTCGAACTACGGTATGTATGAAATGAACCTTCAATATTTAACAAAATTGGGATCTCAACATGATTCGTTCTCAAATTCTTGTTGCAGGTGAAGAAGTGGTTACTGCTTTAGGAAGTGAAGTTGATAGGCTAGAGAAAGAGATTCAGGAGCTCGTTCCGGGCATTCGGCATGTCGATATTGAGGCTCATAATCCTACTGGGCCAACCCCATGAGTCACAGGGAAGTCTTTCTTTTCTGTTAATATCGTTACGATTTGTCAATATTATGGCTGCCTTTTAATCGATCCTGAAATGAAGGTTTGGCTTGCCAATGAGGTTTGTGTGTGTGTTAGTCAACGAGTTTCCACTTGAAGTTCAAAACCTTCCCGGTAGGAAACTCGTTAATAATGCACTTCAAGTCTAGGGGGTTTAGGTTGACGTACTCTCATTCCGAACCCTAATATGTTCAGCCTATTCAAAGTTCACTGTATTTCCCTTTGCATTAAAAGAAATTCATTGTTGAACTTTTGACATTCATTCCAAATGTTTGTGAAGATTATTGCAGGGTTTTTTTTTCCTTTTTTCCTATGAGATAACTCGTAAAGTTGTTGACACCCCGAGTACAATTCAATGTTATGAAAATTAGAATTGAAAAGGCATAGGTAATAAGTATTGATCCTAAAACTTTTGTTTTA ATGCGAACATCCTACTTATTGCAACGCTTCGGTTTTCACCACACTCACCGTTCTTCTTCTTCTACCTCATTTCGTTCCCTCTGCACTTCCTCGCCGCCTTCTTTATTTGACTCCAAAACACCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACATCAACCAGAATGTGACAGTTACCGCATTCCACTTATCGGAACTTACTTTCAGTCGCGGAGGCTTTCGTCTCCTTCCAGTTGTTCGAGACGCTCCGTCTTGTTGGGCTTGATTTCATTGGACTCTAATCCCCCTCGTCCTCCTCTTAACCACCATTACGCTTTCCATCGCGGTTTTTTCACTAGAGCTAAGCCTGTACAAAGAATTGAATTCAATGATTATCATAGTCAACGAGCAGTTACCACTGCTTTGTGGTGCAATTTCCTTGTTTTCTCTCTGAAATTTGGGGTTTGGTTTGCCACATCAAGTCATGTCATGCTCGCAGAAGTTGTGCACTCTGTTGCTGATTTTGCAAATCAGGCACTTCTTGCTTATGGTCTGAGTAGCTCAAGGCGTGCCCCTGATGCTATCCATCCTTACGGATATTCTAAGGAAAGGTTTGTTTGGTCATTGATATCTGCTGTTGGGATCTTTTGTCTTGGTTCTGGTGCTACCATTGTTAATGGAATCCAAAATTTGTGGACTTCACAGGTAACTGGTCAATTGAAATTTGAATCCTGCTTCACATGTTATCACTTTCAAATTTTCTCTTTTCCCATTTGGTACTTAGCTCATTTGTTGTTAGTGGCAACTCTGGATGTTATCTTCTAA MRTSYLLQRFGFHHTHRSSSSTSFRSLCTSSPPSLFDSKTPQQQQQQQQQQQQHQPECDSYRIPLIGTYFQSRRLSSPSSCSRRSVLLGLISLDSNPPRPPLNHHYAFHRGFFTRAKPVQRIEFNDYHSQRAVTTALWCNFLVFSLKFGVWFATSSHVMLAEVVHSVADFANQALLAYGLSSSRRAPDAIHPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQNLWTSQVTGQLKFESCFTCYHFQIFSFPIWYLAHLLLVATLDVIF Homology
BLAST of Cucsat.G3644.T16 vs. ExPASy Swiss-Prot
Match: Q8H1G3 (Metal tolerance protein C4 OS=Arabidopsis thaliana OX=3702 GN=MTPC4 PE=2 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.3e-60 Identity = 115/139 (82.73%), Postives = 124/139 (89.21%), Query Frame = 0
BLAST of Cucsat.G3644.T16 vs. ExPASy Swiss-Prot
Match: Q5PQZ3 (Zinc transporter 9 OS=Danio rerio OX=7955 GN=slc30a9 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.7e-18 Identity = 51/110 (46.36%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of Cucsat.G3644.T16 vs. ExPASy Swiss-Prot
Match: Q6PML9 (Zinc transporter 9 OS=Homo sapiens OX=9606 GN=SLC30A9 PE=1 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.0e-16 Identity = 50/133 (37.59%), Postives = 69/133 (51.88%), Query Frame = 0
BLAST of Cucsat.G3644.T16 vs. ExPASy Swiss-Prot
Match: Q5R4H0 (Zinc transporter 9 OS=Pongo abelii OX=9601 GN=SLC30A9 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.0e-16 Identity = 50/133 (37.59%), Postives = 69/133 (51.88%), Query Frame = 0
BLAST of Cucsat.G3644.T16 vs. ExPASy Swiss-Prot
Match: Q6DCE3 (Zinc transporter 9 OS=Xenopus laevis OX=8355 GN=slc30a9 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.0e-16 Identity = 48/110 (43.64%), Postives = 63/110 (57.27%), Query Frame = 0
BLAST of Cucsat.G3644.T16 vs. NCBI nr
Match: KAE8646481.1 (hypothetical protein Csa_015722 [Cucumis sativus]) HSP 1 Score: 464 bits (1195), Expect = 1.09e-160 Identity = 230/239 (96.23%), Postives = 233/239 (97.49%), Query Frame = 0
BLAST of Cucsat.G3644.T16 vs. NCBI nr
Match: APM86799.1 (metal tolerance protein 7 [Cucumis sativus]) HSP 1 Score: 464 bits (1195), Expect = 5.64e-160 Identity = 230/239 (96.23%), Postives = 233/239 (97.49%), Query Frame = 0
BLAST of Cucsat.G3644.T16 vs. NCBI nr
Match: XP_031744646.1 (metal tolerance protein C4 [Cucumis sativus]) HSP 1 Score: 464 bits (1195), Expect = 5.64e-160 Identity = 230/239 (96.23%), Postives = 233/239 (97.49%), Query Frame = 0
BLAST of Cucsat.G3644.T16 vs. NCBI nr
Match: XP_008462214.1 (PREDICTED: metal tolerance protein C4 isoform X1 [Cucumis melo]) HSP 1 Score: 429 bits (1103), Expect = 1.12e-146 Identity = 220/245 (89.80%), Postives = 227/245 (92.65%), Query Frame = 0
BLAST of Cucsat.G3644.T16 vs. NCBI nr
Match: XP_038898774.1 (metal tolerance protein C4 isoform X1 [Benincasa hispida]) HSP 1 Score: 404 bits (1038), Expect = 5.61e-137 Identity = 206/239 (86.19%), Postives = 213/239 (89.12%), Query Frame = 0
BLAST of Cucsat.G3644.T16 vs. ExPASy TrEMBL
Match: A0A1L5J031 (Metal tolerance protein 7 OS=Cucumis sativus OX=3659 GN=MTP7 PE=2 SV=1) HSP 1 Score: 464 bits (1195), Expect = 2.73e-160 Identity = 230/239 (96.23%), Postives = 233/239 (97.49%), Query Frame = 0
BLAST of Cucsat.G3644.T16 vs. ExPASy TrEMBL
Match: A0A1S3CGZ0 (metal tolerance protein C4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500625 PE=4 SV=1) HSP 1 Score: 429 bits (1103), Expect = 5.40e-147 Identity = 220/245 (89.80%), Postives = 227/245 (92.65%), Query Frame = 0
BLAST of Cucsat.G3644.T16 vs. ExPASy TrEMBL
Match: A0A6J1DCJ1 (metal tolerance protein C4 OS=Momordica charantia OX=3673 GN=LOC111019096 PE=4 SV=1) HSP 1 Score: 379 bits (972), Expect = 2.73e-127 Identity = 194/239 (81.17%), Postives = 203/239 (84.94%), Query Frame = 0
BLAST of Cucsat.G3644.T16 vs. ExPASy TrEMBL
Match: A0A6J1HJX8 (metal tolerance protein C4-like OS=Cucurbita moschata OX=3662 GN=LOC111464242 PE=4 SV=1) HSP 1 Score: 378 bits (970), Expect = 6.03e-127 Identity = 196/239 (82.01%), Postives = 205/239 (85.77%), Query Frame = 0
BLAST of Cucsat.G3644.T16 vs. ExPASy TrEMBL
Match: A0A6J1KD60 (metal tolerance protein C4-like OS=Cucurbita maxima OX=3661 GN=LOC111494540 PE=4 SV=1) HSP 1 Score: 374 bits (960), Expect = 1.79e-125 Identity = 193/239 (80.75%), Postives = 203/239 (84.94%), Query Frame = 0
BLAST of Cucsat.G3644.T16 vs. TAIR 10
Match: AT1G51610.1 (Cation efflux family protein ) HSP 1 Score: 234.6 bits (597), Expect = 9.5e-62 Identity = 115/139 (82.73%), Postives = 124/139 (89.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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